Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61697.t1 | XP_003588766.1 | 97 | 637 | 19 | 0 | 2 | 638 | 7 | 643 | 8.00E-233 | 816.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61697.t1 | Q708Y0 | 63.8 | 638 | 207 | 8 | 2 | 637 | 7 | 622 | 9.6e-118 | 425.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61697.t1 | G7I706 | 97.0 | 637 | 19 | 0 | 2 | 638 | 7 | 643 | 5.8e-233 | 816.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005189 | MS.gene61697 | PPI |
| MS.gene006075 | MS.gene61697 | PPI |
| MS.gene52620 | MS.gene61697 | PPI |
| MS.gene88847 | MS.gene61697 | PPI |
| MS.gene040998 | MS.gene61697 | PPI |
| MS.gene78077 | MS.gene61697 | PPI |
| MS.gene61697 | MS.gene60765 | PPI |
| MS.gene041002 | MS.gene61697 | PPI |
| MS.gene44056 | MS.gene61697 | PPI |
| MS.gene91547 | MS.gene61697 | PPI |
| MS.gene33917 | MS.gene61697 | PPI |
| MS.gene018833 | MS.gene61697 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61697.t1 | MTR_1g012520 | 97.174 | 637 | 18 | 0 | 2 | 638 | 7 | 643 | 0.0 | 1241 |
| MS.gene61697.t1 | MTR_3g107280 | 66.195 | 636 | 208 | 3 | 4 | 637 | 10 | 640 | 0.0 | 828 |
| MS.gene61697.t1 | MTR_4g114640 | 60.905 | 619 | 232 | 4 | 24 | 638 | 21 | 633 | 0.0 | 697 |
| MS.gene61697.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 81 | 653 | 0.0 | 652 |
| MS.gene61697.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 26 | 598 | 0.0 | 652 |
| MS.gene61697.t1 | MTR_4g114650 | 56.908 | 608 | 227 | 4 | 30 | 637 | 30 | 602 | 0.0 | 652 |
| MS.gene61697.t1 | MTR_2g021030 | 27.759 | 598 | 367 | 18 | 63 | 628 | 11 | 575 | 2.46e-39 | 153 |
| MS.gene61697.t1 | MTR_2g021030 | 27.536 | 414 | 260 | 11 | 140 | 553 | 205 | 578 | 1.19e-27 | 118 |
| MS.gene61697.t1 | MTR_2g021030 | 28.409 | 264 | 180 | 4 | 140 | 403 | 334 | 588 | 1.52e-24 | 108 |
| MS.gene61697.t1 | MTR_4g013255 | 29.960 | 504 | 293 | 20 | 124 | 601 | 115 | 584 | 1.14e-30 | 128 |
| MS.gene61697.t1 | MTR_4g013255 | 28.926 | 363 | 218 | 10 | 149 | 508 | 296 | 621 | 6.87e-29 | 122 |
| MS.gene61697.t1 | MTR_4g013255 | 25.749 | 334 | 214 | 11 | 316 | 623 | 77 | 402 | 1.14e-13 | 74.7 |
| MS.gene61697.t1 | MTR_7g112570 | 29.754 | 447 | 265 | 15 | 186 | 601 | 186 | 614 | 4.30e-28 | 120 |
| MS.gene61697.t1 | MTR_7g112570 | 27.527 | 465 | 269 | 15 | 170 | 606 | 119 | 543 | 2.16e-22 | 102 |
| MS.gene61697.t1 | MTR_7g112570 | 28.745 | 247 | 171 | 4 | 171 | 417 | 350 | 591 | 3.99e-19 | 92.0 |
| MS.gene61697.t1 | MTR_7g112570 | 24.279 | 416 | 255 | 12 | 171 | 539 | 273 | 675 | 4.07e-18 | 89.0 |
| MS.gene61697.t1 | MTR_7g112570 | 27.273 | 264 | 179 | 6 | 169 | 428 | 399 | 653 | 1.19e-17 | 87.4 |
| MS.gene61697.t1 | MTR_7g112570 | 29.263 | 434 | 260 | 13 | 186 | 588 | 186 | 603 | 4.96e-28 | 119 |
| MS.gene61697.t1 | MTR_7g112570 | 27.617 | 449 | 257 | 15 | 186 | 606 | 135 | 543 | 1.59e-22 | 102 |
| MS.gene61697.t1 | MTR_7g112570 | 28.745 | 247 | 171 | 4 | 171 | 417 | 350 | 591 | 3.42e-19 | 92.0 |
| MS.gene61697.t1 | MTR_7g112570 | 24.706 | 340 | 212 | 9 | 171 | 479 | 273 | 599 | 3.63e-17 | 85.9 |
| MS.gene61697.t1 | MTR_7g112570 | 29.665 | 209 | 135 | 5 | 169 | 373 | 399 | 599 | 7.56e-16 | 81.6 |
| MS.gene61697.t1 | MTR_7g112570 | 29.302 | 430 | 257 | 13 | 186 | 584 | 186 | 599 | 6.23e-28 | 119 |
| MS.gene61697.t1 | MTR_7g112570 | 27.617 | 449 | 257 | 15 | 186 | 606 | 135 | 543 | 2.02e-22 | 102 |
| MS.gene61697.t1 | MTR_7g112570 | 28.745 | 247 | 171 | 4 | 171 | 417 | 350 | 591 | 3.33e-19 | 92.0 |
| MS.gene61697.t1 | MTR_7g112570 | 24.706 | 340 | 212 | 9 | 171 | 479 | 273 | 599 | 3.92e-17 | 85.5 |
| MS.gene61697.t1 | MTR_7g112570 | 29.108 | 213 | 139 | 5 | 169 | 377 | 399 | 603 | 5.12e-16 | 82.0 |
| MS.gene61697.t1 | MTR_2g021030 | 30.796 | 289 | 192 | 7 | 171 | 458 | 153 | 434 | 2.97e-27 | 115 |
| MS.gene61697.t1 | MTR_2g021030 | 28.859 | 298 | 156 | 7 | 223 | 495 | 127 | 393 | 3.21e-21 | 97.4 |
| MS.gene61697.t1 | MTR_2g021030 | 34.028 | 144 | 89 | 1 | 140 | 283 | 282 | 419 | 5.38e-15 | 78.2 |
| MS.gene61697.t1 | MTR_2g021030 | 25.911 | 247 | 151 | 5 | 381 | 627 | 127 | 341 | 4.12e-12 | 69.3 |
| MS.gene61697.t1 | MTR_1g114610 | 26.913 | 379 | 255 | 8 | 61 | 431 | 18 | 382 | 2.24e-26 | 112 |
| MS.gene61697.t1 | MTR_1g114610 | 28.968 | 252 | 171 | 4 | 137 | 386 | 145 | 390 | 2.09e-19 | 91.7 |
| MS.gene61697.t1 | MTR_1g114610 | 25.625 | 320 | 206 | 8 | 247 | 564 | 93 | 382 | 2.30e-19 | 91.3 |
| MS.gene61697.t1 | MTR_1g114610 | 25.143 | 350 | 195 | 7 | 197 | 513 | 95 | 410 | 9.23e-19 | 89.7 |
| MS.gene61697.t1 | MTR_1g114610 | 28.492 | 179 | 125 | 3 | 450 | 627 | 110 | 286 | 8.98e-13 | 70.9 |
| MS.gene61697.t1 | MTR_8g028140 | 28.533 | 375 | 245 | 7 | 48 | 412 | 7 | 368 | 4.68e-24 | 105 |
| MS.gene61697.t1 | MTR_8g028140 | 27.667 | 300 | 186 | 8 | 355 | 630 | 82 | 374 | 2.21e-16 | 82.0 |
| MS.gene61697.t1 | MTR_8g028140 | 30.224 | 268 | 165 | 3 | 156 | 412 | 32 | 288 | 2.31e-21 | 95.9 |
| MS.gene61697.t1 | MTR_8g028140 | 27.972 | 286 | 175 | 8 | 369 | 630 | 16 | 294 | 2.65e-16 | 80.9 |
| MS.gene61697.t1 | MTR_4g019320 | 20.729 | 439 | 281 | 9 | 161 | 564 | 109 | 515 | 8.41e-19 | 90.9 |
| MS.gene61697.t1 | MTR_3g088895 | 29.474 | 190 | 107 | 2 | 205 | 394 | 123 | 285 | 1.29e-18 | 88.6 |
| MS.gene61697.t1 | MTR_3g088895 | 34.066 | 91 | 60 | 0 | 169 | 259 | 192 | 282 | 9.30e-11 | 64.3 |
| MS.gene61697.t1 | MTR_1g015450 | 25.667 | 487 | 269 | 20 | 183 | 629 | 339 | 772 | 2.85e-18 | 89.7 |
| MS.gene61697.t1 | MTR_1g015480 | 25.424 | 413 | 238 | 15 | 183 | 577 | 157 | 517 | 3.18e-18 | 89.4 |
| MS.gene61697.t1 | MTR_1g029500 | 26.577 | 222 | 124 | 3 | 199 | 408 | 104 | 298 | 1.21e-17 | 85.5 |
| MS.gene61697.t1 | MTR_1g029500 | 27.751 | 209 | 140 | 2 | 175 | 372 | 106 | 314 | 3.16e-14 | 75.1 |
| MS.gene61697.t1 | MTR_1g029500 | 26.866 | 201 | 108 | 3 | 138 | 302 | 127 | 324 | 1.14e-11 | 67.0 |
| MS.gene61697.t1 | MTR_4g009030 | 23.322 | 596 | 355 | 17 | 60 | 604 | 3 | 547 | 2.18e-16 | 83.2 |
| MS.gene61697.t1 | MTR_1g054625 | 22.830 | 311 | 176 | 5 | 223 | 528 | 92 | 343 | 2.15e-15 | 78.6 |
| MS.gene61697.t1 | MTR_1g054625 | 23.875 | 289 | 158 | 6 | 169 | 452 | 120 | 351 | 6.91e-15 | 77.0 |
| MS.gene61697.t1 | MTR_1g054625 | 27.907 | 301 | 196 | 12 | 331 | 629 | 58 | 339 | 1.43e-14 | 75.9 |
| MS.gene61697.t1 | MTR_1g054625 | 26.378 | 254 | 171 | 8 | 304 | 553 | 73 | 314 | 3.22e-14 | 75.1 |
| MS.gene61697.t1 | MTR_1g054625 | 23.973 | 292 | 160 | 6 | 166 | 452 | 20 | 254 | 3.47e-15 | 76.3 |
| MS.gene61697.t1 | MTR_1g054625 | 30.252 | 238 | 157 | 8 | 394 | 629 | 12 | 242 | 4.73e-15 | 75.9 |
| MS.gene61697.t1 | MTR_1g054625 | 22.526 | 293 | 167 | 4 | 237 | 528 | 13 | 246 | 4.50e-14 | 73.2 |
| MS.gene61697.t1 | MTR_1g054625 | 27.358 | 212 | 144 | 6 | 344 | 553 | 14 | 217 | 2.07e-13 | 71.2 |
| MS.gene61697.t1 | MTR_4g036815 | 25.843 | 356 | 200 | 13 | 197 | 550 | 189 | 482 | 4.03e-14 | 75.9 |
| MS.gene61697.t1 | MTR_5g075860 | 22.660 | 406 | 264 | 9 | 211 | 604 | 175 | 542 | 5.10e-14 | 75.5 |
| MS.gene61697.t1 | MTR_4g094932 | 24.070 | 457 | 281 | 16 | 61 | 501 | 44 | 450 | 2.28e-12 | 70.1 |
| MS.gene61697.t1 | MTR_5g095830 | 22.081 | 471 | 298 | 15 | 171 | 604 | 145 | 583 | 2.98e-12 | 70.1 |
| MS.gene61697.t1 | MTR_4g130620 | 30.726 | 179 | 108 | 6 | 224 | 400 | 102 | 266 | 4.16e-12 | 67.8 |
| MS.gene61697.t1 | MTR_1g018790 | 23.729 | 295 | 199 | 9 | 196 | 479 | 137 | 416 | 8.18e-12 | 68.6 |
| MS.gene61697.t1 | MTR_3g006050 | 22.571 | 350 | 217 | 10 | 197 | 536 | 192 | 497 | 1.61e-11 | 67.8 |
| MS.gene61697.t1 | MTR_1g114010 | 23.950 | 238 | 149 | 4 | 169 | 404 | 215 | 422 | 2.09e-11 | 67.4 |
| MS.gene61697.t1 | MTR_1g114010 | 23.950 | 238 | 149 | 4 | 169 | 404 | 136 | 343 | 2.13e-11 | 67.0 |
| MS.gene61697.t1 | MTR_1g114010 | 23.950 | 238 | 149 | 4 | 169 | 404 | 145 | 352 | 2.52e-11 | 67.0 |
| MS.gene61697.t1 | MTR_4g125440 | 25.090 | 279 | 195 | 8 | 341 | 613 | 397 | 667 | 3.36e-11 | 67.0 |
| MS.gene61697.t1 | MTR_1g114010 | 23.950 | 238 | 149 | 4 | 169 | 404 | 296 | 503 | 4.33e-11 | 66.2 |
| MS.gene61697.t1 | MTR_3g408430 | 24.419 | 430 | 270 | 19 | 63 | 480 | 64 | 450 | 6.31e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61697.t1 | AT2G25490 | 60.469 | 640 | 232 | 8 | 2 | 638 | 7 | 628 | 0.0 | 753 |
| MS.gene61697.t1 | AT5G25350 | 58.307 | 638 | 242 | 8 | 2 | 637 | 7 | 622 | 0.0 | 686 |
| MS.gene61697.t1 | AT4G15475 | 28.571 | 588 | 364 | 20 | 63 | 637 | 11 | 555 | 2.50e-46 | 173 |
| MS.gene61697.t1 | AT4G15475 | 26.471 | 340 | 241 | 4 | 120 | 455 | 252 | 586 | 1.90e-30 | 127 |
| MS.gene61697.t1 | AT4G15475 | 26.166 | 386 | 245 | 10 | 140 | 498 | 205 | 577 | 1.75e-25 | 112 |
| MS.gene61697.t1 | AT5G27920 | 26.177 | 531 | 331 | 16 | 147 | 626 | 82 | 602 | 7.10e-30 | 125 |
| MS.gene61697.t1 | AT5G27920 | 24.494 | 445 | 277 | 14 | 212 | 604 | 67 | 504 | 1.36e-19 | 93.6 |
| MS.gene61697.t1 | AT5G27920 | 26.506 | 249 | 178 | 4 | 171 | 419 | 364 | 607 | 1.84e-15 | 80.5 |
| MS.gene61697.t1 | AT5G23340 | 26.780 | 295 | 185 | 4 | 301 | 594 | 85 | 349 | 1.18e-25 | 110 |
| MS.gene61697.t1 | AT5G23340 | 23.967 | 363 | 266 | 5 | 61 | 421 | 8 | 362 | 1.98e-22 | 100 |
| MS.gene61697.t1 | AT5G23340 | 25.562 | 356 | 219 | 8 | 170 | 516 | 84 | 402 | 1.28e-18 | 89.0 |
| MS.gene61697.t1 | AT5G01720 | 28.540 | 459 | 267 | 16 | 171 | 605 | 163 | 584 | 6.74e-23 | 103 |
| MS.gene61697.t1 | AT5G01720 | 26.344 | 372 | 209 | 9 | 124 | 495 | 274 | 580 | 5.92e-21 | 97.8 |
| MS.gene61697.t1 | AT5G01720 | 26.687 | 326 | 229 | 9 | 302 | 627 | 61 | 376 | 7.69e-12 | 68.9 |
| MS.gene61697.t1 | AT1G21410 | 25.305 | 328 | 161 | 8 | 199 | 526 | 106 | 349 | 2.00e-19 | 90.9 |
| MS.gene61697.t1 | AT1G21410 | 30.636 | 173 | 115 | 5 | 459 | 629 | 102 | 271 | 7.42e-14 | 73.9 |
| MS.gene61697.t1 | AT1G21410 | 23.256 | 215 | 148 | 2 | 175 | 372 | 108 | 322 | 6.55e-13 | 71.2 |
| MS.gene61697.t1 | AT1G21410 | 25.305 | 328 | 161 | 8 | 199 | 526 | 106 | 349 | 2.00e-19 | 90.9 |
| MS.gene61697.t1 | AT1G21410 | 30.636 | 173 | 115 | 5 | 459 | 629 | 102 | 271 | 7.42e-14 | 73.9 |
| MS.gene61697.t1 | AT1G21410 | 23.256 | 215 | 148 | 2 | 175 | 372 | 108 | 322 | 6.55e-13 | 71.2 |
| MS.gene61697.t1 | AT1G77000 | 29.082 | 196 | 112 | 2 | 199 | 394 | 106 | 274 | 3.97e-18 | 87.0 |
| MS.gene61697.t1 | AT1G77000 | 25.641 | 234 | 140 | 4 | 175 | 374 | 108 | 341 | 1.35e-14 | 76.3 |
| MS.gene61697.t1 | AT1G77000 | 29.082 | 196 | 112 | 2 | 199 | 394 | 106 | 274 | 3.97e-18 | 87.0 |
| MS.gene61697.t1 | AT1G77000 | 25.641 | 234 | 140 | 4 | 175 | 374 | 108 | 341 | 1.35e-14 | 76.3 |
| MS.gene61697.t1 | AT4G33210 | 23.370 | 552 | 316 | 21 | 126 | 638 | 289 | 772 | 1.04e-16 | 84.7 |
| MS.gene61697.t1 | AT3G07550 | 24.090 | 357 | 259 | 6 | 57 | 408 | 12 | 361 | 1.77e-15 | 79.3 |
| MS.gene61697.t1 | AT3G07550 | 24.367 | 316 | 196 | 8 | 188 | 495 | 62 | 342 | 2.24e-12 | 69.7 |
| MS.gene61697.t1 | AT3G07550 | 27.759 | 299 | 170 | 9 | 343 | 636 | 118 | 375 | 3.31e-11 | 66.2 |
| MS.gene61697.t1 | AT3G07550 | 24.090 | 357 | 259 | 6 | 57 | 408 | 12 | 361 | 1.77e-15 | 79.3 |
| MS.gene61697.t1 | AT3G07550 | 24.367 | 316 | 196 | 8 | 188 | 495 | 62 | 342 | 2.24e-12 | 69.7 |
| MS.gene61697.t1 | AT3G07550 | 27.759 | 299 | 170 | 9 | 343 | 636 | 118 | 375 | 3.31e-11 | 66.2 |
| MS.gene61697.t1 | AT3G58530 | 24.345 | 267 | 152 | 7 | 175 | 434 | 128 | 351 | 2.36e-15 | 78.6 |
| MS.gene61697.t1 | AT3G58530 | 27.090 | 299 | 177 | 10 | 342 | 633 | 81 | 345 | 1.43e-14 | 76.3 |
| MS.gene61697.t1 | AT3G58530 | 20.640 | 344 | 208 | 7 | 188 | 525 | 58 | 342 | 3.46e-13 | 72.0 |
| MS.gene61697.t1 | AT3G58530 | 24.281 | 313 | 174 | 7 | 169 | 476 | 92 | 346 | 1.61e-11 | 66.6 |
| MS.gene61697.t1 | AT3G07550 | 23.596 | 356 | 243 | 6 | 53 | 408 | 8 | 334 | 2.87e-14 | 75.5 |
| MS.gene61697.t1 | AT3G07550 | 24.042 | 287 | 182 | 7 | 210 | 495 | 64 | 315 | 4.53e-12 | 68.6 |
| MS.gene61697.t1 | AT3G07550 | 27.759 | 299 | 170 | 9 | 343 | 636 | 91 | 348 | 1.66e-11 | 67.0 |
| MS.gene61697.t1 | AT1G80630 | 23.383 | 402 | 235 | 9 | 195 | 564 | 148 | 508 | 4.17e-14 | 75.9 |
| MS.gene61697.t1 | AT2G06040 | 25.260 | 289 | 202 | 7 | 332 | 610 | 473 | 757 | 7.38e-14 | 75.5 |
| MS.gene61697.t1 | AT1G55590 | 24.889 | 225 | 164 | 4 | 167 | 389 | 294 | 515 | 1.13e-13 | 74.7 |
| MS.gene61697.t1 | AT1G55590 | 24.628 | 471 | 300 | 19 | 176 | 612 | 108 | 557 | 2.62e-12 | 70.5 |
| MS.gene61697.t1 | AT1G47056 | 23.913 | 460 | 294 | 16 | 36 | 487 | 15 | 426 | 6.60e-13 | 72.0 |
| MS.gene61697.t1 | AT1G47056 | 28.082 | 292 | 142 | 8 | 342 | 576 | 130 | 410 | 2.97e-11 | 66.6 |
| MS.gene61697.t1 | AT3G50080 | 24.222 | 450 | 259 | 16 | 52 | 495 | 33 | 406 | 7.79e-13 | 71.6 |
| MS.gene61697.t1 | AT4G07400 | 30.667 | 150 | 76 | 3 | 172 | 294 | 330 | 478 | 8.63e-13 | 71.6 |
| MS.gene61697.t1 | AT1G77000 | 26.087 | 184 | 83 | 3 | 199 | 382 | 106 | 236 | 3.08e-12 | 67.8 |
| MS.gene61697.t1 | AT1G77000 | 26.087 | 184 | 83 | 3 | 199 | 382 | 106 | 236 | 3.08e-12 | 67.8 |
| MS.gene61697.t1 | AT2G17020 | 23.729 | 531 | 290 | 21 | 178 | 603 | 45 | 565 | 9.45e-12 | 68.6 |
| MS.gene61697.t1 | AT5G67250 | 25.000 | 308 | 209 | 11 | 196 | 495 | 119 | 412 | 9.37e-11 | 65.1 |
Find 155 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTAAAGTCTTTCTCTTTA+TGG | 0.012962 | 1.3:-9025759 | MS.gene61697:CDS |
| TGCCACAGAATTACCCAATT+TGG | 0.171018 | 1.3:-9025103 | MS.gene61697:CDS |
| CTTACCCGCTTTGAGAAAAT+TGG | 0.171059 | 1.3:-9024522 | MS.gene61697:CDS |
| GATCTCTCTCTAGCTGTTAT+TGG | 0.220084 | 1.3:-9025406 | MS.gene61697:CDS |
| TAACATTTGGGAGGAAATTA+AGG | 0.226363 | 1.3:+9025353 | None:intergenic |
| ATAGATATAACCTTAAGATT+TGG | 0.265371 | 1.3:+9025529 | None:intergenic |
| CTTCAACAAGTTGAATTAAC+TGG | 0.274879 | 1.3:-9024887 | MS.gene61697:CDS |
| CCTTCTTTCCTTCCAAGCTT+CGG | 0.280846 | 1.3:+9025920 | None:intergenic |
| TGAGAGAGGCTTCTGGGTTA+TGG | 0.281774 | 1.3:-9025329 | MS.gene61697:CDS |
| ATCTGTAACTGCCCTGGATT+TGG | 0.285015 | 1.3:-9024950 | MS.gene61697:CDS |
| CAGGAAGAAATTTGCTTCCT+TGG | 0.285276 | 1.3:+9026266 | None:intergenic |
| TTGTGTGCGATCTCCGATTC+CGG | 0.288491 | 1.3:-9024626 | MS.gene61697:CDS |
| CTTCTTTCCTTCCAAGCTTC+GGG | 0.291790 | 1.3:+9025921 | None:intergenic |
| CTCAAATGACGAGAATAAAA+TGG | 0.294170 | 1.3:-9025983 | MS.gene61697:CDS |
| ACTGCATCACGAGGAGGATT+AGG | 0.301726 | 1.3:-9025862 | MS.gene61697:CDS |
| TTTCTATGGTAAGCTGCTTT+GGG | 0.317243 | 1.3:-9025036 | MS.gene61697:CDS |
| TGTGGCACTCTTCCAATTGT+AGG | 0.329715 | 1.3:+9025119 | None:intergenic |
| TCAAGGACTGTGCCGGTGTT+GGG | 0.330559 | 1.3:-9025507 | MS.gene61697:CDS |
| AGATGCTTGTTGAACATCTT+TGG | 0.338078 | 1.3:-9024439 | MS.gene61697:CDS |
| CTGGATATTTAGTCCCAAAA+AGG | 0.340573 | 1.3:+9024493 | None:intergenic |
| TAGATATAACCTTAAGATTT+GGG | 0.344478 | 1.3:+9025530 | None:intergenic |
| GCCACAGAATTACCCAATTT+GGG | 0.348800 | 1.3:-9025102 | MS.gene61697:CDS |
| GTTGAATTAACTGGACTTAA+GGG | 0.349439 | 1.3:-9024878 | MS.gene61697:CDS |
| AGGAAGAAATTTGCTTCCTT+GGG | 0.350453 | 1.3:+9026267 | None:intergenic |
| GCAAATTTCTTCCTGTCTCT+TGG | 0.351075 | 1.3:-9026258 | MS.gene61697:CDS |
| CTCGAAATTCTGAACCTTGA+AGG | 0.357149 | 1.3:-9024725 | MS.gene61697:CDS |
| ATGTTAGTGAGAGAGGCTTC+TGG | 0.357800 | 1.3:-9025336 | MS.gene61697:CDS |
| AAGCCTCTCTCACTAACATT+TGG | 0.362156 | 1.3:+9025340 | None:intergenic |
| AGTTGAATTAACTGGACTTA+AGG | 0.362492 | 1.3:-9024879 | MS.gene61697:CDS |
| GTTTCTTCTGTTGGTGATGA+AGG | 0.367259 | 1.3:-9025733 | MS.gene61697:CDS |
| TTATGGAATGTTTCTTCTGT+TGG | 0.375011 | 1.3:-9025742 | MS.gene61697:CDS |
| GAGAGAGGCTTCTGGGTTAT+GGG | 0.375727 | 1.3:-9025328 | MS.gene61697:CDS |
| GCACAATCGTTTATGTTCTC+AGG | 0.383637 | 1.3:-9026324 | None:intergenic |
| GCCTCTTTGAGATCTTTAGA+AGG | 0.392355 | 1.3:-9026113 | MS.gene61697:CDS |
| TGGGTTATGGGAAATGCTAA+TGG | 0.394159 | 1.3:-9025316 | MS.gene61697:CDS |
| GTCAGGCTGCACTTTGGTTA+CGG | 0.399322 | 1.3:-9024552 | MS.gene61697:CDS |
| CCCTGGTCAATCTGCATGGT+TGG | 0.402559 | 1.3:-9024751 | MS.gene61697:CDS |
| ATCCATTAGCGATCTCAATA+AGG | 0.403036 | 1.3:+9025710 | None:intergenic |
| GAAAGTGACTGTGAAGAGTT+TGG | 0.407597 | 1.3:-9025961 | MS.gene61697:CDS |
| TGTGTGCGATCTCCGATTCC+GGG | 0.408544 | 1.3:-9024625 | MS.gene61697:CDS |
| ATCACTTGAAAGCCTACAAT+TGG | 0.412655 | 1.3:-9025131 | MS.gene61697:CDS |
| CCAAAGAAGTCGAAGAAAAC+AGG | 0.414246 | 1.3:+9025467 | None:intergenic |
| CTGCATCACGAGGAGGATTA+GGG | 0.415640 | 1.3:-9025861 | MS.gene61697:CDS |
| AGCCTCTCTCACTAACATTT+GGG | 0.422860 | 1.3:+9025341 | None:intergenic |
| GTGTGCCAGGGCTGCTATCC+CGG | 0.423492 | 1.3:+9024607 | None:intergenic |
| CTTAAGGGAGTCACAGATGC+TGG | 0.425211 | 1.3:-9024863 | MS.gene61697:CDS |
| GGCCTTATTGAGATCGCTAA+TGG | 0.425507 | 1.3:-9025712 | MS.gene61697:CDS |
| CATCAAGATCACAAAGCAAT+TGG | 0.425806 | 1.3:+9024654 | None:intergenic |
| ATCTCAAAGAGGCACTCATC+TGG | 0.426649 | 1.3:+9026123 | None:intergenic |
| AAAGTTCTGCCCAAATCTTA+AGG | 0.427807 | 1.3:-9025539 | MS.gene61697:CDS |
| CTACAGATTCTTTCTCTGTC+AGG | 0.430438 | 1.3:-9024569 | MS.gene61697:CDS |
| CGATTCCGGGATAGCAGCCC+TGG | 0.432829 | 1.3:-9024612 | MS.gene61697:CDS |
| TGTTAGTGAGAGAGGCTTCT+GGG | 0.434709 | 1.3:-9025335 | MS.gene61697:CDS |
| AGGGTAGCGTTGCCAAATCC+AGG | 0.436782 | 1.3:+9024938 | None:intergenic |
| CATTCTCCATCGAAAACAAA+TGG | 0.441047 | 1.3:+9026183 | None:intergenic |
| AACTGCGATTAAAGCCTTGT+CGG | 0.441499 | 1.3:+9025642 | None:intergenic |
| TTACCCGCTTTGAGAAAATT+GGG | 0.441746 | 1.3:-9024521 | MS.gene61697:CDS |
| AAAGCCTTGTCGGAAATTGC+AGG | 0.442003 | 1.3:+9025652 | None:intergenic |
| TAACTGTGGTGCAAAATTGA+AGG | 0.443191 | 1.3:-9025062 | MS.gene61697:CDS |
| CAGAAGCATAAGCCAGCGTT+TGG | 0.444467 | 1.3:+9026050 | None:intergenic |
| CTGCTTTGGGATCAAGGATC+TGG | 0.448619 | 1.3:-9025023 | MS.gene61697:CDS |
| GCACTCCTTTCTTCACCAAC+AGG | 0.449873 | 1.3:+9026087 | None:intergenic |
| GGTAAGCTGCTTTGGGATCA+AGG | 0.450353 | 1.3:-9025029 | MS.gene61697:CDS |
| ATCAAGGACTGTGCCGGTGT+TGG | 0.452196 | 1.3:-9025508 | MS.gene61697:CDS |
| AACTTTAACAAGACCAGCCT+CGG | 0.457238 | 1.3:+9024817 | None:intergenic |
| CTAGCTGTTATTGGACACTA+TGG | 0.460329 | 1.3:-9025397 | MS.gene61697:CDS |
| TTCAAGTGATATAGCAGCCT+TGG | 0.460685 | 1.3:+9025144 | None:intergenic |
| GGGATACCTTTCCCGAAGCT+TGG | 0.461300 | 1.3:-9025932 | MS.gene61697:CDS |
| CAACTTGAGGGCCAAGAGAC+AGG | 0.463141 | 1.3:+9026247 | None:intergenic |
| TGTGCCGGTGTTGGGGATCA+AGG | 0.466975 | 1.3:-9025499 | MS.gene61697:CDS |
| TTATCGATCTGTAACTGCCC+TGG | 0.467205 | 1.3:-9024956 | MS.gene61697:CDS |
| CCGAAGCTTGGAAGGAAAGA+AGG | 0.469354 | 1.3:-9025920 | MS.gene61697:CDS |
| CTCCCAAATGTTAGTGAGAG+AGG | 0.473423 | 1.3:-9025343 | MS.gene61697:CDS |
| CGCGTTCTGAGTTGCTTCCA+CGG | 0.473495 | 1.3:+9025827 | None:intergenic |
| TTGCTTGAGAGCTCCGAGGC+TGG | 0.476623 | 1.3:-9024830 | MS.gene61697:CDS |
| CTGCTTGTGTTTCCAAACGC+TGG | 0.478903 | 1.3:-9026062 | MS.gene61697:CDS |
| TGGGATCAAGGATCTGGACT+TGG | 0.479690 | 1.3:-9025017 | MS.gene61697:CDS |
| AGACTTGCTGCTATTGCAGT+TGG | 0.480536 | 1.3:-9025886 | MS.gene61697:CDS |
| CAGGGCTGCTATCCCGGAAT+CGG | 0.488751 | 1.3:+9024613 | None:intergenic |
| GCAGAGGAGTAACCGATGTT+GGG | 0.492742 | 1.3:-9025258 | MS.gene61697:CDS |
| AACGCTACCCTTTCTGTACT+CGG | 0.496998 | 1.3:-9024926 | MS.gene61697:CDS |
| TTCTCTGTCAGGCTGCACTT+TGG | 0.500531 | 1.3:-9024558 | MS.gene61697:CDS |
| CAGGGATGAAACTACTTTGT+CGG | 0.506121 | 1.3:+9024769 | None:intergenic |
| TCTTAAGGTTATATCTATCA+AGG | 0.507799 | 1.3:-9025524 | MS.gene61697:CDS |
| TGCAGAGGAGTAACCGATGT+TGG | 0.509560 | 1.3:-9025259 | MS.gene61697:CDS |
| GCCTCGGAGCTCTCAAGCAA+TGG | 0.512849 | 1.3:+9024833 | None:intergenic |
| AGTGATTCACAATGAGATAC+AGG | 0.513908 | 1.3:+9024986 | None:intergenic |
| GGTTGCCTGTTGGTGAAGAA+AGG | 0.514240 | 1.3:-9026092 | MS.gene61697:CDS |
| GACTTCTTTGGTTCTGACAA+AGG | 0.516837 | 1.3:-9025455 | MS.gene61697:CDS |
| TGCTGATTGAATTGCAATGC+TGG | 0.518629 | 1.3:+9024474 | None:intergenic |
| AGACCTTCATTGCGAATGCT+AGG | 0.519816 | 1.3:+9025574 | None:intergenic |
| TGTCCTAGCATTCGCAATGA+AGG | 0.520385 | 1.3:-9025577 | MS.gene61697:CDS |
| GAACGCGGCGTGACAACTCT+AGG | 0.525236 | 1.3:-9025811 | MS.gene61697:CDS |
| TACCTTTCCCGAAGCTTGGA+AGG | 0.529475 | 1.3:-9025928 | MS.gene61697:CDS |
| CAAGGACTGTGCCGGTGTTG+GGG | 0.530233 | 1.3:-9025506 | MS.gene61697:CDS |
| TGCTTGTTGAACATCTTTGG+AGG | 0.531336 | 1.3:-9024436 | MS.gene61697:CDS |
| TTCCTTCCAAGCTTCGGGAA+AGG | 0.533717 | 1.3:+9025926 | None:intergenic |
| TCCAACCATGCAGATTGACC+AGG | 0.536554 | 1.3:+9024750 | None:intergenic |
| GGTCTCAAAGCAGTTGCTAG+TGG | 0.537588 | 1.3:-9025790 | MS.gene61697:CDS |
| AACATCGGTTACTCCTCTGC+AGG | 0.539479 | 1.3:+9025261 | None:intergenic |
| AAAGGTGAAGCTTCAAGCAC+TGG | 0.541994 | 1.3:-9025437 | MS.gene61697:CDS |
| AGCTAGAGAGAGATCAGAAA+CGG | 0.542100 | 1.3:+9025414 | None:intergenic |
| GGGATTGAAGCTGTTGGAAA+GGG | 0.549164 | 1.3:-9025238 | MS.gene61697:CDS |
| TCATCCCTGGTCAATCTGCA+TGG | 0.552095 | 1.3:-9024755 | MS.gene61697:CDS |
| GTTGGGGATCAAGGAATCGC+TGG | 0.553667 | 1.3:-9025490 | MS.gene61697:CDS |
| TAAATCTTGCAGTTCAGGAA+AGG | 0.554597 | 1.3:+9024405 | None:intergenic |
| CTGTGAAGAGTTTGGAGGTG+AGG | 0.561043 | 1.3:-9025953 | MS.gene61697:CDS |
| CGACAAAGTAGTTTCATCCC+TGG | 0.562846 | 1.3:-9024768 | MS.gene61697:CDS |
| GATAGCAGACATCAACTTGA+GGG | 0.567197 | 1.3:+9026235 | None:intergenic |
| TGTGAAGAGTTTGGAGGTGA+GGG | 0.567927 | 1.3:-9025952 | MS.gene61697:CDS |
| AATTCAACTTGTTGAAGCTG+AGG | 0.567931 | 1.3:+9024893 | None:intergenic |
| TTAGGGAAGCTTTCAATCCG+TGG | 0.570647 | 1.3:-9025844 | MS.gene61697:CDS |
| GCTGCACTTTGGTTACGGAC+AGG | 0.573743 | 1.3:-9024547 | MS.gene61697:CDS |
| ATATCTATCAAGGACTGTGC+CGG | 0.574521 | 1.3:-9025514 | MS.gene61697:CDS |
| ACAACTTTCCGAGTACAGAA+AGG | 0.575435 | 1.3:+9024918 | None:intergenic |
| AAAGAGAAAGACTTTAGAGA+AGG | 0.577504 | 1.3:+9025763 | None:intergenic |
| CAACTTTCCGAGTACAGAAA+GGG | 0.577567 | 1.3:+9024919 | None:intergenic |
| ATTCAACTTGTTGAAGCTGA+GGG | 0.582352 | 1.3:+9024894 | None:intergenic |
| TTAAGGGAGTCACAGATGCT+GGG | 0.582917 | 1.3:-9024862 | MS.gene61697:CDS |
| AAATTGCAGGGCATTTGCAA+AGG | 0.585154 | 1.3:+9025665 | None:intergenic |
| CTTGTTAAAGTTAATCTCAG+TGG | 0.588339 | 1.3:-9024806 | MS.gene61697:CDS |
| CGGATTGATTTCATTCACCA+AGG | 0.590158 | 1.3:-9025161 | MS.gene61697:CDS |
| AATGAAGGTCTACAAGCCAT+TGG | 0.590793 | 1.3:-9025562 | MS.gene61697:CDS |
| TTTATTCTCGTCATTTGAGG+AGG | 0.593111 | 1.3:+9025987 | None:intergenic |
| AAGCCTTGTCGGAAATTGCA+GGG | 0.597068 | 1.3:+9025653 | None:intergenic |
| ATTTGGGCAGAACTTTCCAA+TGG | 0.599132 | 1.3:+9025546 | None:intergenic |
| GAGGAAATTAAGGACAAGAT+CGG | 0.606521 | 1.3:+9025363 | None:intergenic |
| TGTGCATTTCTCTCAGACAA+CGG | 0.609269 | 1.3:-9025181 | MS.gene61697:CDS |
| GGAAGAAATTTGCTTCCTTG+GGG | 0.618210 | 1.3:+9026268 | None:intergenic |
| TGGGATTGAAGCTGTTGGAA+AGG | 0.620246 | 1.3:-9025239 | MS.gene61697:CDS |
| CTCACAATTGCATCCTGCAG+AGG | 0.621245 | 1.3:-9025274 | MS.gene61697:CDS |
| AACAGCTTCAATCCCAACAT+CGG | 0.622290 | 1.3:+9025246 | None:intergenic |
| AATGATAACTCGGTCAGAGT+CGG | 0.624354 | 1.3:+9025607 | None:intergenic |
| ACCCAAATTGGGTAATTCTG+TGG | 0.625237 | 1.3:+9025101 | None:intergenic |
| ATCTTTAGAAGGTTGCCTGT+TGG | 0.625556 | 1.3:-9026102 | MS.gene61697:CDS |
| ACACGTGATCTCTTCTGAGG+TGG | 0.627046 | 1.3:+9026213 | None:intergenic |
| ATGCCCTGCAATTTCCGACA+AGG | 0.628954 | 1.3:-9025656 | MS.gene61697:CDS |
| GGAATCGGAGATCGCACACA+AGG | 0.629259 | 1.3:+9024628 | None:intergenic |
| GGATAGCAGACATCAACTTG+AGG | 0.630331 | 1.3:+9026234 | None:intergenic |
| GGGTAGCGTTGCCAAATCCA+GGG | 0.632564 | 1.3:+9024939 | None:intergenic |
| CTGACACGTGATCTCTTCTG+AGG | 0.633789 | 1.3:+9026210 | None:intergenic |
| ACAAGACTCTAATGATAACT+CGG | 0.633790 | 1.3:+9025597 | None:intergenic |
| GATGTTGGGATTGAAGCTGT+TGG | 0.634700 | 1.3:-9025244 | MS.gene61697:CDS |
| CTCTCTCACTAACATTTGGG+AGG | 0.636568 | 1.3:+9025344 | None:intergenic |
| AGTGACTGTGAAGAGTTTGG+AGG | 0.636749 | 1.3:-9025958 | MS.gene61697:CDS |
| GATTCCTTGATCCCCAACAC+CGG | 0.655421 | 1.3:+9025495 | None:intergenic |
| TCCATTGCTTGAGAGCTCCG+AGG | 0.656114 | 1.3:-9024834 | MS.gene61697:CDS |
| ACCTTCTAAAGATCTCAAAG+AGG | 0.665153 | 1.3:+9026112 | None:intergenic |
| CGTGGAAGCAACTCAGAACG+CGG | 0.669342 | 1.3:-9025826 | MS.gene61697:CDS |
| GTTGGAACTGCATCACGAGG+AGG | 0.679979 | 1.3:-9025868 | MS.gene61697:CDS |
| CCAACCATGCAGATTGACCA+GGG | 0.686419 | 1.3:+9024751 | None:intergenic |
| GGTTTGTGTATAACCCACCA+TGG | 0.686541 | 1.3:+9026289 | None:intergenic |
| AATAGCAGCAAGTCTAACAT+CGG | 0.688914 | 1.3:+9025894 | None:intergenic |
| GCAGTTGGAACTGCATCACG+AGG | 0.700255 | 1.3:-9025871 | MS.gene61697:CDS |
| TGGGTTATACACAAACCCCA+AGG | 0.726645 | 1.3:-9026283 | MS.gene61697:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGATATAACCTTAAGATT+TGG | + | chr1.3:9025204-9025223 | None:intergenic | 20.0% |
| !! | TAGATATAACCTTAAGATTT+GGG | + | chr1.3:9025203-9025222 | None:intergenic | 20.0% |
| ! | TCTTAAGGTTATATCTATCA+AGG | - | chr1.3:9025206-9025225 | MS.gene61697:CDS | 25.0% |
| !!! | AAAATTGAAGGCTTTTTCTA+TGG | - | chr1.3:9025680-9025699 | MS.gene61697:CDS | 25.0% |
| !!! | TGATATTTTTACAACCTTCA+AGG | + | chr1.3:9026022-9026041 | None:intergenic | 25.0% |
| ACAAGACTCTAATGATAACT+CGG | + | chr1.3:9025136-9025155 | None:intergenic | 30.0% | |
| AGTTGAATTAACTGGACTTA+AGG | - | chr1.3:9025851-9025870 | MS.gene61697:CDS | 30.0% | |
| CTCAAATGACGAGAATAAAA+TGG | - | chr1.3:9024747-9024766 | MS.gene61697:CDS | 30.0% | |
| CTTGTTAAAGTTAATCTCAG+TGG | - | chr1.3:9025924-9025943 | MS.gene61697:CDS | 30.0% | |
| GTTGAATTAACTGGACTTAA+GGG | - | chr1.3:9025852-9025871 | MS.gene61697:CDS | 30.0% | |
| TAACATTTGGGAGGAAATTA+AGG | + | chr1.3:9025380-9025399 | None:intergenic | 30.0% | |
| TTATGGAATGTTTCTTCTGT+TGG | - | chr1.3:9024988-9025007 | MS.gene61697:CDS | 30.0% | |
| ! | AAAGAGAAAGACTTTAGAGA+AGG | + | chr1.3:9024970-9024989 | None:intergenic | 30.0% |
| ! | AGATGTACGCTTTTCAAATT+AGG | + | chr1.3:9025522-9025541 | None:intergenic | 30.0% |
| ! | ATTTTGCACCACAGTTAAAA+AGG | + | chr1.3:9025665-9025684 | None:intergenic | 30.0% |
| ! | CATTTTATTCTCGTCATTTG+AGG | + | chr1.3:9024749-9024768 | None:intergenic | 30.0% |
| ! | CTTCAACAAGTTGAATTAAC+TGG | - | chr1.3:9025843-9025862 | MS.gene61697:CDS | 30.0% |
| !! | ATTACCCAATTTGGGTTTTT+CGG | - | chr1.3:9025636-9025655 | MS.gene61697:CDS | 30.0% |
| !! | CTCTAAAGTCTTTCTCTTTA+TGG | - | chr1.3:9024971-9024990 | MS.gene61697:CDS | 30.0% |
| AAAGTTCTGCCCAAATCTTA+AGG | - | chr1.3:9025191-9025210 | MS.gene61697:CDS | 35.0% | |
| AATAGCAGCAAGTCTAACAT+CGG | + | chr1.3:9024839-9024858 | None:intergenic | 35.0% | |
| AGTGATTCACAATGAGATAC+AGG | + | chr1.3:9025747-9025766 | None:intergenic | 35.0% | |
| ATCACTTGAAAGCCTACAAT+TGG | - | chr1.3:9025599-9025618 | MS.gene61697:CDS | 35.0% | |
| ATCCATTAGCGATCTCAATA+AGG | + | chr1.3:9025023-9025042 | None:intergenic | 35.0% | |
| CATCAAGATCACAAAGCAAT+TGG | + | chr1.3:9026079-9026098 | None:intergenic | 35.0% | |
| CATTCTCCATCGAAAACAAA+TGG | + | chr1.3:9024550-9024569 | None:intergenic | 35.0% | |
| CTGGATATTTAGTCCCAAAA+AGG | + | chr1.3:9026240-9026259 | None:intergenic | 35.0% | |
| GAGGAAATTAAGGACAAGAT+CGG | + | chr1.3:9025370-9025389 | None:intergenic | 35.0% | |
| TAACTGTGGTGCAAAATTGA+AGG | - | chr1.3:9025668-9025687 | MS.gene61697:CDS | 35.0% | |
| TATTTAGTCCCAAAAAGGTG+TGG | + | chr1.3:9026235-9026254 | None:intergenic | 35.0% | |
| TTTATTCTCGTCATTTGAGG+AGG | + | chr1.3:9024746-9024765 | None:intergenic | 35.0% | |
| ! | ACCTTCTAAAGATCTCAAAG+AGG | + | chr1.3:9024621-9024640 | None:intergenic | 35.0% |
| ! | AGATGCTTGTTGAACATCTT+TGG | - | chr1.3:9026291-9026310 | MS.gene61697:CDS | 35.0% |
| ! | AGGAAGAAATTTGCTTCCTT+GGG | + | chr1.3:9024466-9024485 | None:intergenic | 35.0% |
| ! | TTTCTATGGTAAGCTGCTTT+GGG | - | chr1.3:9025694-9025713 | MS.gene61697:CDS | 35.0% |
| ! | TTTTCTATGGTAAGCTGCTT+TGG | - | chr1.3:9025693-9025712 | MS.gene61697:CDS | 35.0% |
| !! | AATTCAACTTGTTGAAGCTG+AGG | + | chr1.3:9025840-9025859 | None:intergenic | 35.0% |
| !! | AGTGTTCCATTTGTTTTCGA+TGG | - | chr1.3:9024541-9024560 | MS.gene61697:CDS | 35.0% |
| !! | ATTCAACTTGTTGAAGCTGA+GGG | + | chr1.3:9025839-9025858 | None:intergenic | 35.0% |
| !! | CATTTGTTTTCGATGGAGAA+TGG | - | chr1.3:9024548-9024567 | MS.gene61697:CDS | 35.0% |
| !! | TTACCCGCTTTGAGAAAATT+GGG | - | chr1.3:9026209-9026228 | MS.gene61697:CDS | 35.0% |
| AACAGCTTCAATCCCAACAT+CGG | + | chr1.3:9025487-9025506 | None:intergenic | 40.0% | |
| AACTTTAACAAGACCAGCCT+CGG | + | chr1.3:9025916-9025935 | None:intergenic | 40.0% | |
| AAGCCTCTCTCACTAACATT+TGG | + | chr1.3:9025393-9025412 | None:intergenic | 40.0% | |
| AATGAAGGTCTACAAGCCAT+TGG | - | chr1.3:9025168-9025187 | MS.gene61697:CDS | 40.0% | |
| AATGATAACTCGGTCAGAGT+CGG | + | chr1.3:9025126-9025145 | None:intergenic | 40.0% | |
| ACAACTTTCCGAGTACAGAA+AGG | + | chr1.3:9025815-9025834 | None:intergenic | 40.0% | |
| ACCCAAATTGGGTAATTCTG+TGG | + | chr1.3:9025632-9025651 | None:intergenic | 40.0% | |
| AGCCTCTCTCACTAACATTT+GGG | + | chr1.3:9025392-9025411 | None:intergenic | 40.0% | |
| AGCTAGAGAGAGATCAGAAA+CGG | + | chr1.3:9025319-9025338 | None:intergenic | 40.0% | |
| ATATCTATCAAGGACTGTGC+CGG | - | chr1.3:9025216-9025235 | MS.gene61697:CDS | 40.0% | |
| ATTTGGGCAGAACTTTCCAA+TGG | + | chr1.3:9025187-9025206 | None:intergenic | 40.0% | |
| CAACTTTCCGAGTACAGAAA+GGG | + | chr1.3:9025814-9025833 | None:intergenic | 40.0% | |
| CAGGGATGAAACTACTTTGT+CGG | + | chr1.3:9025964-9025983 | None:intergenic | 40.0% | |
| CCAAAGAAGTCGAAGAAAAC+AGG | + | chr1.3:9025266-9025285 | None:intergenic | 40.0% | |
| CTACAGATTCTTTCTCTGTC+AGG | - | chr1.3:9026161-9026180 | MS.gene61697:CDS | 40.0% | |
| CTAGCTGTTATTGGACACTA+TGG | - | chr1.3:9025333-9025352 | MS.gene61697:CDS | 40.0% | |
| CTCGAAATTCTGAACCTTGA+AGG | - | chr1.3:9026005-9026024 | MS.gene61697:CDS | 40.0% | |
| GAAAGTGACTGTGAAGAGTT+TGG | - | chr1.3:9024769-9024788 | MS.gene61697:CDS | 40.0% | |
| GATAGCAGACATCAACTTGA+GGG | + | chr1.3:9024498-9024517 | None:intergenic | 40.0% | |
| GATCTCTCTCTAGCTGTTAT+TGG | - | chr1.3:9025324-9025343 | MS.gene61697:CDS | 40.0% | |
| GCAAATTTCTTCCTGTCTCT+TGG | - | chr1.3:9024472-9024491 | MS.gene61697:CDS | 40.0% | |
| GCCACAGAATTACCCAATTT+GGG | - | chr1.3:9025628-9025647 | MS.gene61697:CDS | 40.0% | |
| TGCCACAGAATTACCCAATT+TGG | - | chr1.3:9025627-9025646 | MS.gene61697:CDS | 40.0% | |
| TGGGTTATGGGAAATGCTAA+TGG | - | chr1.3:9025414-9025433 | MS.gene61697:CDS | 40.0% | |
| TGTGCATTTCTCTCAGACAA+CGG | - | chr1.3:9025549-9025568 | MS.gene61697:CDS | 40.0% | |
| TTCAAGTGATATAGCAGCCT+TGG | + | chr1.3:9025589-9025608 | None:intergenic | 40.0% | |
| ! | AAAATTGGGCCACACCTTTT+TGG | - | chr1.3:9026223-9026242 | MS.gene61697:CDS | 40.0% |
| ! | AAATTGCAGGGCATTTGCAA+AGG | + | chr1.3:9025068-9025087 | None:intergenic | 40.0% |
| ! | AAATTGGGCCACACCTTTTT+GGG | - | chr1.3:9026224-9026243 | MS.gene61697:CDS | 40.0% |
| ! | AACTGCGATTAAAGCCTTGT+CGG | + | chr1.3:9025091-9025110 | None:intergenic | 40.0% |
| ! | ATCTTTAGAAGGTTGCCTGT+TGG | - | chr1.3:9024628-9024647 | MS.gene61697:CDS | 40.0% |
| ! | CAGGAAGAAATTTGCTTCCT+TGG | + | chr1.3:9024467-9024486 | None:intergenic | 40.0% |
| ! | CCTGTTTTCTTCGACTTCTT+TGG | - | chr1.3:9025263-9025282 | MS.gene61697:CDS | 40.0% |
| ! | CGGATTGATTTCATTCACCA+AGG | - | chr1.3:9025569-9025588 | MS.gene61697:CDS | 40.0% |
| ! | GGAAGAAATTTGCTTCCTTG+GGG | + | chr1.3:9024465-9024484 | None:intergenic | 40.0% |
| ! | GTGATAACTTTTGCCATGGT+GGG | - | chr1.3:9024428-9024447 | MS.gene61697:CDS | 40.0% |
| ! | TCAGGTGATAACTTTTGCCA+TGG | - | chr1.3:9024424-9024443 | MS.gene61697:CDS | 40.0% |
| ! | TGCTGATTGAATTGCAATGC+TGG | + | chr1.3:9026259-9026278 | None:intergenic | 40.0% |
| ! | TGCTTGTTGAACATCTTTGG+AGG | - | chr1.3:9026294-9026313 | MS.gene61697:CDS | 40.0% |
| !! | CTTACCCGCTTTGAGAAAAT+TGG | - | chr1.3:9026208-9026227 | MS.gene61697:CDS | 40.0% |
| !! | GACTTCTTTGGTTCTGACAA+AGG | - | chr1.3:9025275-9025294 | MS.gene61697:CDS | 40.0% |
| !! | GCCTCTTTGAGATCTTTAGA+AGG | - | chr1.3:9024617-9024636 | MS.gene61697:CDS | 40.0% |
| !! | GTTTCTTCTGTTGGTGATGA+AGG | - | chr1.3:9024997-9025016 | MS.gene61697:CDS | 40.0% |
| AAAGGTGAAGCTTCAAGCAC+TGG | - | chr1.3:9025293-9025312 | MS.gene61697:CDS | 45.0% | |
| AACGCTACCCTTTCTGTACT+CGG | - | chr1.3:9025804-9025823 | MS.gene61697:CDS | 45.0% | |
| AGACCTTCATTGCGAATGCT+AGG | + | chr1.3:9025159-9025178 | None:intergenic | 45.0% | |
| AGTGACTGTGAAGAGTTTGG+AGG | - | chr1.3:9024772-9024791 | MS.gene61697:CDS | 45.0% | |
| ATCTGTAACTGCCCTGGATT+TGG | - | chr1.3:9025780-9025799 | MS.gene61697:CDS | 45.0% | |
| ATGTTAGTGAGAGAGGCTTC+TGG | - | chr1.3:9025394-9025413 | MS.gene61697:CDS | 45.0% | |
| CCTTCTTTCCTTCCAAGCTT+CGG | + | chr1.3:9024813-9024832 | None:intergenic | 45.0% | |
| CGACAAAGTAGTTTCATCCC+TGG | - | chr1.3:9025962-9025981 | MS.gene61697:CDS | 45.0% | |
| CTCCCAAATGTTAGTGAGAG+AGG | - | chr1.3:9025387-9025406 | MS.gene61697:CDS | 45.0% | |
| CTCTCTCACTAACATTTGGG+AGG | + | chr1.3:9025389-9025408 | None:intergenic | 45.0% | |
| CTTCTTTCCTTCCAAGCTTC+GGG | + | chr1.3:9024812-9024831 | None:intergenic | 45.0% | |
| GACGCCGAAAAACCCAAATT+GGG | + | chr1.3:9025643-9025662 | None:intergenic | 45.0% | |
| GATGTTGGGATTGAAGCTGT+TGG | - | chr1.3:9025486-9025505 | MS.gene61697:CDS | 45.0% | |
| GGATAGCAGACATCAACTTG+AGG | + | chr1.3:9024499-9024518 | None:intergenic | 45.0% | |
| GGGATTGAAGCTGTTGGAAA+GGG | - | chr1.3:9025492-9025511 | MS.gene61697:CDS | 45.0% | |
| GGTTTGTGTATAACCCACCA+TGG | + | chr1.3:9024444-9024463 | None:intergenic | 45.0% | |
| TGGGATTGAAGCTGTTGGAA+AGG | - | chr1.3:9025491-9025510 | MS.gene61697:CDS | 45.0% | |
| TGGGTTATACACAAACCCCA+AGG | - | chr1.3:9024447-9024466 | MS.gene61697:CDS | 45.0% | |
| TGTCCTAGCATTCGCAATGA+AGG | - | chr1.3:9025153-9025172 | MS.gene61697:CDS | 45.0% | |
| TGTGAAGAGTTTGGAGGTGA+GGG | - | chr1.3:9024778-9024797 | MS.gene61697:CDS | 45.0% | |
| TGTGGCACTCTTCCAATTGT+AGG | + | chr1.3:9025614-9025633 | None:intergenic | 45.0% | |
| TGTTAGTGAGAGAGGCTTCT+GGG | - | chr1.3:9025395-9025414 | MS.gene61697:CDS | 45.0% | |
| TTAAGGGAGTCACAGATGCT+GGG | - | chr1.3:9025868-9025887 | MS.gene61697:CDS | 45.0% | |
| TTAGGGAAGCTTTCAATCCG+TGG | - | chr1.3:9024886-9024905 | MS.gene61697:CDS | 45.0% | |
| TTATCGATCTGTAACTGCCC+TGG | - | chr1.3:9025774-9025793 | MS.gene61697:CDS | 45.0% | |
| ! | AAAGCCTTGTCGGAAATTGC+AGG | + | chr1.3:9025081-9025100 | None:intergenic | 45.0% |
| ! | AAGCCTTGTCGGAAATTGCA+GGG | + | chr1.3:9025080-9025099 | None:intergenic | 45.0% |
| ! | GGTGATAACTTTTGCCATGG+TGG | - | chr1.3:9024427-9024446 | MS.gene61697:CDS | 45.0% |
| ! | GTGGCCCAATTTTCTCAAAG+CGG | + | chr1.3:9026216-9026235 | None:intergenic | 45.0% |
| ! | TATCTGTTTTGCGTGTGCCA+GGG | + | chr1.3:9026138-9026157 | None:intergenic | 45.0% |
| ! | TGGCCCAATTTTCTCAAAGC+GGG | + | chr1.3:9026215-9026234 | None:intergenic | 45.0% |
| ! | TTATCTGTTTTGCGTGTGCC+AGG | + | chr1.3:9026139-9026158 | None:intergenic | 45.0% |
| !! | AGACTTGCTGCTATTGCAGT+TGG | - | chr1.3:9024844-9024863 | MS.gene61697:CDS | 45.0% |
| !! | ATCTCAAAGAGGCACTCATC+TGG | + | chr1.3:9024610-9024629 | None:intergenic | 45.0% |
| !! | GGCCTTATTGAGATCGCTAA+TGG | - | chr1.3:9025018-9025037 | MS.gene61697:CDS | 45.0% |
| !! | TTCGGCGTCCTTTTTAACTG+TGG | - | chr1.3:9025654-9025673 | MS.gene61697:CDS | 45.0% |
| ACTGCATCACGAGGAGGATT+AGG | - | chr1.3:9024868-9024887 | MS.gene61697:CDS | 50.0% | |
| ATGCCCTGCAATTTCCGACA+AGG | - | chr1.3:9025074-9025093 | MS.gene61697:CDS | 50.0% | |
| CCAACCATGCAGATTGACCA+GGG | + | chr1.3:9025982-9026001 | None:intergenic | 50.0% | |
| CCGAAGCTTGGAAGGAAAGA+AGG | - | chr1.3:9024810-9024829 | MS.gene61697:CDS | 50.0% | |
| CTCACAATTGCATCCTGCAG+AGG | - | chr1.3:9025456-9025475 | MS.gene61697:CDS | 50.0% | |
| CTGACACGTGATCTCTTCTG+AGG | + | chr1.3:9024523-9024542 | None:intergenic | 50.0% | |
| CTGCATCACGAGGAGGATTA+GGG | - | chr1.3:9024869-9024888 | MS.gene61697:CDS | 50.0% | |
| CTGCTTGTGTTTCCAAACGC+TGG | - | chr1.3:9024668-9024687 | MS.gene61697:CDS | 50.0% | |
| CTGTGAAGAGTTTGGAGGTG+AGG | - | chr1.3:9024777-9024796 | MS.gene61697:CDS | 50.0% | |
| CTTAAGGGAGTCACAGATGC+TGG | - | chr1.3:9025867-9025886 | MS.gene61697:CDS | 50.0% | |
| GAGAGAGGCTTCTGGGTTAT+GGG | - | chr1.3:9025402-9025421 | MS.gene61697:CDS | 50.0% | |
| GATTCCTTGATCCCCAACAC+CGG | + | chr1.3:9025238-9025257 | None:intergenic | 50.0% | |
| GCACTCCTTTCTTCACCAAC+AGG | + | chr1.3:9024646-9024665 | None:intergenic | 50.0% | |
| GCAGAGGAGTAACCGATGTT+GGG | - | chr1.3:9025472-9025491 | MS.gene61697:CDS | 50.0% | |
| GGACGCCGAAAAACCCAAAT+TGG | + | chr1.3:9025644-9025663 | None:intergenic | 50.0% | |
| GGTCTCAAAGCAGTTGCTAG+TGG | - | chr1.3:9024940-9024959 | MS.gene61697:CDS | 50.0% | |
| GTCAGGCTGCACTTTGGTTA+CGG | - | chr1.3:9026178-9026197 | MS.gene61697:CDS | 50.0% | |
| TACCTTTCCCGAAGCTTGGA+AGG | - | chr1.3:9024802-9024821 | MS.gene61697:CDS | 50.0% | |
| TCATCCCTGGTCAATCTGCA+TGG | - | chr1.3:9025975-9025994 | MS.gene61697:CDS | 50.0% | |
| TCCAACCATGCAGATTGACC+AGG | + | chr1.3:9025983-9026002 | None:intergenic | 50.0% | |
| TGAGAGAGGCTTCTGGGTTA+TGG | - | chr1.3:9025401-9025420 | MS.gene61697:CDS | 50.0% | |
| TGCAGAGGAGTAACCGATGT+TGG | - | chr1.3:9025471-9025490 | MS.gene61697:CDS | 50.0% | |
| TGGGATCAAGGATCTGGACT+TGG | - | chr1.3:9025713-9025732 | MS.gene61697:CDS | 50.0% | |
| TTCCTTCCAAGCTTCGGGAA+AGG | + | chr1.3:9024807-9024826 | None:intergenic | 50.0% | |
| TTCTCTGTCAGGCTGCACTT+TGG | - | chr1.3:9026172-9026191 | MS.gene61697:CDS | 50.0% | |
| TTGTGTGCGATCTCCGATTC+CGG | - | chr1.3:9026104-9026123 | MS.gene61697:CDS | 50.0% | |
| ! | AACATCGGTTACTCCTCTGC+AGG | + | chr1.3:9025472-9025491 | None:intergenic | 50.0% |
| ! | ACACGTGATCTCTTCTGAGG+TGG | + | chr1.3:9024520-9024539 | None:intergenic | 50.0% |
| ! | CAGAAGCATAAGCCAGCGTT+TGG | + | chr1.3:9024683-9024702 | None:intergenic | 50.0% |
| ! | GGTTGCCTGTTGGTGAAGAA+AGG | - | chr1.3:9024638-9024657 | MS.gene61697:CDS | 50.0% |
| !! | CTGCTTTGGGATCAAGGATC+TGG | - | chr1.3:9025707-9025726 | MS.gene61697:CDS | 50.0% |
| !! | GGTAAGCTGCTTTGGGATCA+AGG | - | chr1.3:9025701-9025720 | MS.gene61697:CDS | 50.0% |
| AGGGTAGCGTTGCCAAATCC+AGG | + | chr1.3:9025795-9025814 | None:intergenic | 55.0% | |
| CAACTTGAGGGCCAAGAGAC+AGG | + | chr1.3:9024486-9024505 | None:intergenic | 55.0% | |
| CCCTGGTCAATCTGCATGGT+TGG | - | chr1.3:9025979-9025998 | MS.gene61697:CDS | 55.0% | |
| CGTGGAAGCAACTCAGAACG+CGG | - | chr1.3:9024904-9024923 | MS.gene61697:CDS | 55.0% | |
| GCAGTTGGAACTGCATCACG+AGG | - | chr1.3:9024859-9024878 | MS.gene61697:CDS | 55.0% | |
| GCTGCACTTTGGTTACGGAC+AGG | - | chr1.3:9026183-9026202 | MS.gene61697:CDS | 55.0% | |
| GGAATCGGAGATCGCACACA+AGG | + | chr1.3:9026105-9026124 | None:intergenic | 55.0% | |
| GGGATACCTTTCCCGAAGCT+TGG | - | chr1.3:9024798-9024817 | MS.gene61697:CDS | 55.0% | |
| GGGTAGCGTTGCCAAATCCA+GGG | + | chr1.3:9025794-9025813 | None:intergenic | 55.0% | |
| GTTGGAACTGCATCACGAGG+AGG | - | chr1.3:9024862-9024881 | MS.gene61697:CDS | 55.0% | |
| GTTGGGGATCAAGGAATCGC+TGG | - | chr1.3:9025240-9025259 | MS.gene61697:CDS | 55.0% | |
| TCCATTGCTTGAGAGCTCCG+AGG | - | chr1.3:9025896-9025915 | MS.gene61697:CDS | 55.0% | |
| TGTGTGCGATCTCCGATTCC+GGG | - | chr1.3:9026105-9026124 | MS.gene61697:CDS | 55.0% | |
| ! | ATCAAGGACTGTGCCGGTGT+TGG | - | chr1.3:9025222-9025241 | MS.gene61697:CDS | 55.0% |
| ! | CGCGTTCTGAGTTGCTTCCA+CGG | + | chr1.3:9024906-9024925 | None:intergenic | 55.0% |
| ! | TCAAGGACTGTGCCGGTGTT+GGG | - | chr1.3:9025223-9025242 | MS.gene61697:CDS | 55.0% |
| CAGGGCTGCTATCCCGGAAT+CGG | + | chr1.3:9026120-9026139 | None:intergenic | 60.0% | |
| GAACGCGGCGTGACAACTCT+AGG | - | chr1.3:9024919-9024938 | MS.gene61697:CDS | 60.0% | |
| GCCTCGGAGCTCTCAAGCAA+TGG | + | chr1.3:9025900-9025919 | None:intergenic | 60.0% | |
| TTGCTTGAGAGCTCCGAGGC+TGG | - | chr1.3:9025900-9025919 | MS.gene61697:CDS | 60.0% | |
| ! | CAAGGACTGTGCCGGTGTTG+GGG | - | chr1.3:9025224-9025243 | MS.gene61697:CDS | 60.0% |
| ! | TGTGCCGGTGTTGGGGATCA+AGG | - | chr1.3:9025231-9025250 | MS.gene61697:CDS | 60.0% |
| CGATTCCGGGATAGCAGCCC+TGG | - | chr1.3:9026118-9026137 | MS.gene61697:CDS | 65.0% | |
| GTGTGCCAGGGCTGCTATCC+CGG | + | chr1.3:9026126-9026145 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 9024418 | 9026334 | 9024418 | ID=MS.gene61697 |
| chr1.3 | mRNA | 9024418 | 9026334 | 9024418 | ID=MS.gene61697.t1;Parent=MS.gene61697 |
| chr1.3 | exon | 9024418 | 9026334 | 9024418 | ID=MS.gene61697.t1.exon1;Parent=MS.gene61697.t1 |
| chr1.3 | CDS | 9024418 | 9026334 | 9024418 | ID=cds.MS.gene61697.t1;Parent=MS.gene61697.t1 |
| Gene Sequence |
| Protein sequence |
