AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene63319

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63319.t1 MTR_3g067945 99.306 720 5 0 1 720 1 720 0.0 1485
MS.gene63319.t1 MTR_3g095530 30.279 251 156 7 21 267 9 244 1.83e-22 100
MS.gene63319.t1 MTR_3g095530 34.426 122 77 2 586 707 250 368 1.11e-15 80.1
MS.gene63319.t1 MTR_6g004000 29.482 251 158 7 21 267 9 244 3.24e-22 99.8
MS.gene63319.t1 MTR_6g004000 31.967 122 80 2 586 707 250 368 6.49e-15 77.8
MS.gene63319.t1 MTR_2g008050 29.915 234 143 7 21 247 9 228 9.62e-22 98.2
MS.gene63319.t1 MTR_2g008050 34.426 122 77 2 586 707 250 368 1.53e-15 79.7
MS.gene63319.t1 MTR_7g093260 29.482 251 158 7 21 267 9 244 1.03e-21 98.2
MS.gene63319.t1 MTR_7g093260 34.426 122 77 2 586 707 250 368 1.69e-15 79.3
MS.gene63319.t1 MTR_7g026230 29.084 251 159 7 21 267 9 244 1.03e-21 98.2
MS.gene63319.t1 MTR_7g026230 33.607 122 78 2 586 707 250 368 4.61e-15 78.2
MS.gene63319.t1 MTR_0015s0130 29.084 251 159 7 21 267 9 244 6.13e-21 95.9
MS.gene63319.t1 MTR_0015s0130 33.607 122 78 2 586 707 250 368 3.71e-15 78.2
MS.gene63319.t1 MTR_2g096840 28.685 251 160 7 21 267 9 244 2.64e-20 94.0
MS.gene63319.t1 MTR_2g096840 33.607 122 78 2 586 707 250 368 7.89e-16 80.5
MS.gene63319.t1 MTR_7g027185 29.388 245 154 6 16 253 1 233 1.58e-18 89.0
MS.gene63319.t1 MTR_7g027185 29.388 245 154 6 16 253 1 233 1.60e-18 88.6
MS.gene63319.t1 MTR_7g027185 29.630 243 152 6 18 253 3 233 2.55e-18 87.0
MS.gene63319.t1 MTR_2g445210 36.429 140 84 2 566 705 292 426 9.86e-18 87.0
MS.gene63319.t1 MTR_8g089630 26.296 270 172 6 17 266 5 267 9.79e-15 77.4
MS.gene63319.t1 MTR_5g066400 26.891 238 143 7 19 231 7 238 1.82e-12 70.5
MS.gene63319.t1 MTR_5g066400 26.160 237 146 6 19 231 7 238 2.41e-12 70.1
MS.gene63319.t1 MTR_8g464900 26.891 238 142 8 19 231 7 237 3.36e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene63319.t1 AT3G12380 72.039 726 192 3 1 719 1 722 0.0 1080
MS.gene63319.t1 AT3G12380 71.448 732 192 4 1 719 1 728 0.0 1074
MS.gene63319.t1 AT2G42100 30.544 239 139 7 19 247 8 229 3.44e-23 102
MS.gene63319.t1 AT2G42100 33.607 122 78 2 586 707 251 369 1.45e-14 76.6
MS.gene63319.t1 AT3G53750 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT3G53750 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT3G53750 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT3G53750 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT2G37620 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT2G37620 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT2G37620 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT2G37620 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT2G37620 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT2G37620 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT2G37620 30.279 251 156 7 21 267 9 244 6.49e-23 102
MS.gene63319.t1 AT2G37620 32.787 122 79 2 586 707 250 368 6.86e-15 77.4
MS.gene63319.t1 AT5G09810 30.279 251 156 7 21 267 9 244 1.93e-22 100
MS.gene63319.t1 AT5G09810 34.426 122 77 2 586 707 250 368 1.92e-15 79.3
MS.gene63319.t1 AT3G12110 30.342 234 142 7 21 247 9 228 4.56e-22 99.4
MS.gene63319.t1 AT3G12110 32.787 122 79 2 586 707 250 368 7.65e-15 77.4
MS.gene63319.t1 AT3G46520 29.915 234 143 7 21 247 9 228 1.96e-21 97.4
MS.gene63319.t1 AT3G46520 32.787 122 79 2 586 707 250 368 1.09e-13 73.9
MS.gene63319.t1 AT3G46520 29.915 234 143 7 21 247 9 228 1.96e-21 97.4
MS.gene63319.t1 AT3G46520 32.787 122 79 2 586 707 250 368 1.09e-13 73.9
MS.gene63319.t1 AT2G42090 27.935 247 156 6 21 267 3 227 5.02e-21 95.9
MS.gene63319.t1 AT2G42090 33.333 123 79 2 585 707 238 357 1.30e-12 70.5
MS.gene63319.t1 AT5G59370 29.487 234 144 7 21 247 9 228 6.13e-21 95.9
MS.gene63319.t1 AT5G59370 32.787 122 79 2 586 707 250 368 1.14e-13 73.9
MS.gene63319.t1 AT5G59370 29.487 234 144 7 21 247 9 228 6.13e-21 95.9
MS.gene63319.t1 AT5G59370 32.787 122 79 2 586 707 250 368 1.14e-13 73.9
MS.gene63319.t1 AT3G18780 30.342 234 142 7 21 247 9 228 7.87e-21 95.5
MS.gene63319.t1 AT3G18780 33.333 108 69 2 586 693 250 354 4.45e-13 72.0
MS.gene63319.t1 AT3G18780 30.342 234 142 7 21 247 9 228 9.45e-21 95.5
MS.gene63319.t1 AT3G18780 31.967 122 80 2 586 707 250 368 1.36e-14 76.6
MS.gene63319.t1 AT3G18780 30.342 234 142 7 21 247 9 228 9.45e-21 95.5
MS.gene63319.t1 AT3G18780 31.967 122 80 2 586 707 250 368 1.36e-14 76.6
MS.gene63319.t1 AT1G49240 30.342 234 142 7 21 247 9 228 1.02e-20 95.1
MS.gene63319.t1 AT1G49240 31.967 122 80 2 586 707 250 368 1.43e-14 76.6
MS.gene63319.t1 AT3G27000 30.417 240 146 8 22 253 7 233 4.83e-20 93.6
MS.gene63319.t1 AT3G33520 38.525 122 72 1 591 712 298 416 5.52e-18 87.4
MS.gene63319.t1 AT1G13180 28.148 270 167 8 17 266 4 266 3.65e-16 82.0
MS.gene63319.t1 AT2G42170 33.607 122 78 2 586 707 104 222 2.94e-14 73.2
MS.gene63319.t1 AT2G42170 30.303 132 84 3 116 247 57 180 4.30e-14 74.3
MS.gene63319.t1 AT2G42170 35.577 104 64 2 586 689 202 302 9.67e-12 67.4
MS.gene63319.t1 AT2G42170 30.303 132 84 3 116 247 57 180 4.30e-14 74.3
MS.gene63319.t1 AT2G42170 35.577 104 64 2 586 689 202 302 9.67e-12 67.4
MS.gene63319.t1 AT2G42170 33.607 122 78 2 586 707 202 320 6.00e-14 74.3
MS.gene63319.t1 AT2G42170 30.303 132 84 3 116 247 57 180 6.94e-14 73.9
MS.gene63319.t1 AT2G42170 33.607 122 78 2 586 707 202 320 6.00e-14 74.3
MS.gene63319.t1 AT2G42170 30.303 132 84 3 116 247 57 180 6.94e-14 73.9

Find 181 sgRNAs with CRISPR-Local

Find 416 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGGATTGGCGTTGGATTT+TGG 0.159254 3.3:+60130024 None:intergenic
TTCAGAAGCTCGATTGTTTC+TGG 0.165498 3.3:-60126753 MS.gene63319:intron
CGACAGCTTCCTTTATAAAT+TGG 0.189204 3.3:+60127006 None:intergenic
CTCCGAAAGGTCCTTGTATT+TGG 0.211732 3.3:+60125501 None:intergenic
CCAATGGAGCTGCCACATTT+TGG 0.236456 3.3:+60126625 None:intergenic
TTTGGACTGAACAAAATTTC+AGG 0.251702 3.3:+60124923 None:intergenic
AACAATCTGAAAATCTTCTT+TGG 0.277742 3.3:+60124970 None:intergenic
GCGCTTCCTATTTCCGTATT+GGG 0.313695 3.3:-60129958 MS.gene63319:intron
GGAAAATGAATTACGTGGTT+TGG 0.322105 3.3:-60126474 MS.gene63319:CDS
CGCTACAACCCATGTGATTC+CGG 0.323877 3.3:-60127733 MS.gene63319:intron
AGGATGGATTATTATGAAAA+AGG 0.324137 3.3:-60124611 MS.gene63319:CDS
AGAGTACCCAATACGGAAAT+AGG 0.331001 3.3:+60129952 None:intergenic
CGAATGGGTGCAACAGGATC+AGG 0.331988 3.3:-60128788 MS.gene63319:CDS
AGTTCAATCTCGAAGTAAAA+TGG 0.346799 3.3:-60128178 MS.gene63319:CDS
CCAAAATGTGGCAGCTCCAT+TGG 0.349845 3.3:-60126625 MS.gene63319:CDS
CATAACAATGTTCCATCTTC+AGG 0.350576 3.3:+60126792 None:intergenic
TTGCGAGAAAGGCAGCAATA+AGG 0.354563 3.3:-60126562 MS.gene63319:CDS
GGCGCTTCCTATTTCCGTAT+TGG 0.360049 3.3:-60129959 MS.gene63319:CDS
AAGTTGCCAATCTTCATCTT+TGG 0.360116 3.3:+60125300 None:intergenic
GGAAGCTGTCGCACTAATAT+TGG 0.366748 3.3:-60126994 MS.gene63319:CDS
GACGGGGAACCAATTTATAA+AGG 0.369369 3.3:-60127015 MS.gene63319:CDS
TAGAGCACTTGATCCGGTTA+TGG 0.370466 3.3:-60124696 MS.gene63319:CDS
TCAGAAGGAGGCTCCTCAAC+TGG 0.380356 3.3:+60126593 None:intergenic
CAGTCCTTGCGGAAACAAAA+AGG 0.381377 3.3:-60126338 MS.gene63319:CDS
GGCTCCTCCACGAATGGAAA+TGG 0.391186 3.3:-60125442 MS.gene63319:CDS
GCTTCCACCAGTCACAAGTA+TGG 0.392619 3.3:+60124799 None:intergenic
TTTGATCGAATGGGTGCAAC+AGG 0.394008 3.3:-60128794 MS.gene63319:CDS
TTTGATAGCTTGTTGAAAAG+AGG 0.403014 3.3:-60126016 MS.gene63319:intron
AGGTCAAAGGTTGCGAGAAA+TGG 0.404209 3.3:-60126531 MS.gene63319:CDS
GCGTGGCGCCTCAGCAGGTT+GGG 0.405100 3.3:+60125006 None:intergenic
AGCTCTGTGTTATCCTCATC+TGG 0.405219 3.3:+60125235 None:intergenic
GAAGCGCTATGAAGAGGAAT+TGG 0.405469 3.3:-60125943 MS.gene63319:CDS
AATTGTTCCAAGTAAAGCTC+TGG 0.406389 3.3:+60125529 None:intergenic
TGGGAGCTACTTTCTACCTT+GGG 0.410072 3.3:+60125025 None:intergenic
TGATCAACTCCAATCCAGTT+TGG 0.410760 3.3:+60124905 None:intergenic
TTGGGAGCTACTTTCTACCT+TGG 0.411598 3.3:+60125024 None:intergenic
TGCCAAATACAAGGACCTTT+CGG 0.412730 3.3:-60125503 MS.gene63319:CDS
GGAGAAACTGTTACCATTGT+TGG 0.413207 3.3:-60129582 MS.gene63319:CDS
TGCGAGAAAGGCAGCAATAA+GGG 0.413882 3.3:-60126561 MS.gene63319:CDS
TATCACAAACACTTCGTTGT+TGG 0.429773 3.3:+60127784 None:intergenic
TGCTGCCTTTGATCGTGGTA+AGG 0.430300 3.3:-60125341 MS.gene63319:CDS
CCCTGGCATCATTGAACGCC+TGG 0.431968 3.3:-60124768 MS.gene63319:CDS
TGAGGAAGAGATTGCGAGAA+AGG 0.434305 3.3:-60126573 MS.gene63319:CDS
CGAACGCGTGGCGCCTCAGC+AGG 0.435514 3.3:+60125001 None:intergenic
AACGCCTGGAAGCTGGAATT+CGG 0.436950 3.3:-60124754 MS.gene63319:CDS
TCATCCGAATTCCAGCTTCC+AGG 0.437442 3.3:+60124750 None:intergenic
CCACGCCATGCATCCATAAC+CGG 0.439157 3.3:+60124683 None:intergenic
TACTTTGATTGTACTCGCTC+TGG 0.441154 3.3:-60129534 MS.gene63319:CDS
GATCAAAGGCAGCAGTTGTC+AGG 0.443054 3.3:+60125350 None:intergenic
ACTATTTCCATTTCCATTCG+TGG 0.445874 3.3:+60125435 None:intergenic
AAAGTATTAGTACCTATAGA+TGG 0.446199 3.3:+60128126 None:intergenic
ACTTATGGAGTTCCATCTAT+AGG 0.448061 3.3:-60128138 MS.gene63319:intron
GGAACTGAAGCGATTGTAAT+CGG 0.451537 3.3:+60130006 None:intergenic
TTGGTGCCAAAGATGAAGAT+TGG 0.451676 3.3:-60125306 MS.gene63319:CDS
CGCGTGGCGCCTCAGCAGGT+TGG 0.453077 3.3:+60125005 None:intergenic
ATCATTGAACGCCTGGAAGC+TGG 0.453300 3.3:-60124761 MS.gene63319:CDS
TCTGCCGTCAGCATGTCATC+CGG 0.453326 3.3:+60126251 None:intergenic
TTCTCATTAGACGCAGCGTC+AGG 0.453339 3.3:+60126293 None:intergenic
TCTGCTTATGCATCAGCCCC+TGG 0.455002 3.3:-60124656 MS.gene63319:CDS
TGCATACACATTCTGTGATC+AGG 0.456220 3.3:+60128205 None:intergenic
TTGGACTGAACAAAATTTCA+GGG 0.458568 3.3:+60124924 None:intergenic
CGTAAACGACTCAAAACAAA+TGG 0.459916 3.3:-60125466 MS.gene63319:CDS
AATGAGAAGGTTATCATGTA+AGG 0.466365 3.3:-60124852 MS.gene63319:CDS
AAACTGGATTGGAGTTGATC+AGG 0.466958 3.3:-60124903 MS.gene63319:CDS
AGCTTGCCCGCATCTCTTCA+AGG 0.467261 3.3:-60125216 MS.gene63319:CDS
GGAAATGGAAATAGTTTGAC+AGG 0.467693 3.3:-60125427 MS.gene63319:CDS
GGCTAGATTTACATGGGAAA+AGG 0.468160 3.3:-60126822 MS.gene63319:CDS
TGACATGCTGACGGCAGAGC+AGG 0.469962 3.3:-60126246 MS.gene63319:intron
TCTACCTTGGGCACAAATGT+TGG 0.469972 3.3:+60125037 None:intergenic
GGAGAACCCAGAGCTTTACT+TGG 0.470796 3.3:-60125536 MS.gene63319:CDS
CCGCATCTCTTCAAGGCTCC+AGG 0.473430 3.3:-60125209 MS.gene63319:intron
CAAAATGTGGCAGCTCCATT+GGG 0.477487 3.3:-60126624 MS.gene63319:CDS
GAGACTCAGTGCTGCTCAAA+GGG 0.484024 3.3:-60125386 MS.gene63319:CDS
GATGGTCTTGCTATGTGTCC+TGG 0.485729 3.3:-60127759 MS.gene63319:CDS
TCAAAGTACTTCAACAATGC+TGG 0.488489 3.3:+60129549 None:intergenic
TCCAGGCGTTCAATGATGCC+AGG 0.491307 3.3:+60124767 None:intergenic
TTGTTCAGTCCAAACTGGAT+TGG 0.495233 3.3:-60124914 MS.gene63319:CDS
ATCATGTAAGGATGAAAAGC+TGG 0.497771 3.3:-60124840 MS.gene63319:CDS
AATAGTTAGAGCACTTGATC+CGG 0.502102 3.3:-60124702 MS.gene63319:CDS
GGTAAGGGCGAGGATACATT+TGG 0.505021 3.3:-60125325 MS.gene63319:CDS
ACATGGGTTGTAGCGAATCC+AGG 0.505173 3.3:+60127741 None:intergenic
TGGGGTTAGATGAGATGGCC+GGG 0.510141 3.3:-60124880 MS.gene63319:CDS
TTTCACACTCACATATGATA+AGG 0.513121 3.3:+60126922 None:intergenic
CTCGCAATCTCTTCCTCAGA+AGG 0.518831 3.3:+60126578 None:intergenic
ATAGCCGGTCTCTGCTAAGA+AGG 0.523025 3.3:+60126403 None:intergenic
AATACAGGGCTAGATTTACA+TGG 0.523587 3.3:-60126829 MS.gene63319:intron
ACTTCAACAATGCTGGATCA+TGG 0.526588 3.3:+60129556 None:intergenic
GATTGTAATCGGATTGGCGT+TGG 0.527135 3.3:+60130017 None:intergenic
TCAATTAAATCTATGTCCGA+TGG 0.528487 3.3:-60125984 MS.gene63319:CDS
CTGCCGTCAGCATGTCATCC+GGG 0.530851 3.3:+60126252 None:intergenic
CAGAGACCGGCTATGTCTCT+AGG 0.531810 3.3:-60126394 MS.gene63319:CDS
TTGGGTGCCACCTCCAGTTG+AGG 0.532459 3.3:-60126606 MS.gene63319:CDS
CACACAAACATTCACTAGGA+TGG 0.534118 3.3:-60124627 MS.gene63319:CDS
CTCGCCCTTACCACGATCAA+AGG 0.535951 3.3:+60125336 None:intergenic
CGATCCTTCTTAGCAGAGAC+CGG 0.536640 3.3:-60126407 MS.gene63319:CDS
AGGACTGCACAACTTTACTA+CGG 0.540370 3.3:+60126354 None:intergenic
AATGTTTGTGTGTGGAAACC+AGG 0.541962 3.3:+60124638 None:intergenic
CAACTGGAGGTGGCACCCAA+TGG 0.542988 3.3:+60126609 None:intergenic
GGAGGCTCCTCAACTGGAGG+TGG 0.543167 3.3:+60126599 None:intergenic
AGCTGTCGCACTAATATTGG+TGG 0.543175 3.3:-60126991 MS.gene63319:CDS
ACAATTGCGTGCCAAATACA+AGG 0.543355 3.3:-60125512 MS.gene63319:CDS
AGAGACTCAGTGCTGCTCAA+AGG 0.543891 3.3:-60125387 MS.gene63319:CDS
AATGGAGGCTCCTCCACGAA+TGG 0.545578 3.3:-60125448 MS.gene63319:CDS
CTGGAGCCTTGAAGAGATGC+GGG 0.545647 3.3:+60125210 None:intergenic
AAAGGTTGAAGACCTGAAGA+TGG 0.546155 3.3:-60126804 MS.gene63319:CDS
GTGGGGTTAGATGAGATGGC+CGG 0.546632 3.3:-60124881 MS.gene63319:CDS
GACCGGCTATGTCTCTAGGC+AGG 0.549284 3.3:-60126390 MS.gene63319:CDS
GGAACATTGTTATGTTGCAC+AGG 0.549607 3.3:-60126783 MS.gene63319:CDS
CGAAGTGTTTGTGATAAAGA+TGG 0.552869 3.3:-60127777 MS.gene63319:CDS
GGATCCAACATTTGTGCCCA+AGG 0.558370 3.3:-60125041 MS.gene63319:CDS
GCTGCCTTTGATCGTGGTAA+GGG 0.560441 3.3:-60125340 MS.gene63319:CDS
TCAGGTGGGGTTAGATGAGA+TGG 0.560508 3.3:-60124885 MS.gene63319:CDS
ACACATTCTGTGATCAGGAT+AGG 0.562462 3.3:+60128210 None:intergenic
TTGATCCGGTTATGGATGCA+TGG 0.569262 3.3:-60124688 MS.gene63319:CDS
AAGAGGAATTGGAAAGGGAA+AGG 0.571587 3.3:-60125932 MS.gene63319:CDS
TGAAGCGATTGTAATCGGAT+TGG 0.582038 3.3:+60130011 None:intergenic
AAAACAGAAGCGCTATGAAG+AGG 0.582251 3.3:-60125949 MS.gene63319:CDS
ATTGTTCCAAGTAAAGCTCT+GGG 0.582286 3.3:+60125530 None:intergenic
AGTTGAGGAGCCTCCTTCTG+AGG 0.582751 3.3:-60126591 MS.gene63319:CDS
CAATTAAATCTATGTCCGAT+GGG 0.583416 3.3:-60125983 MS.gene63319:CDS
GAATGGGTGCAACAGGATCA+GGG 0.585195 3.3:-60128787 MS.gene63319:CDS
CTTTGATCGTGGTAAGGGCG+AGG 0.585724 3.3:-60125335 MS.gene63319:CDS
ACTAATTCCATACTTGTGAC+TGG 0.586278 3.3:-60124806 MS.gene63319:CDS
CTATGAAGAGGAATTGGAAA+GGG 0.588782 3.3:-60125937 MS.gene63319:CDS
TGGATTGGAGTTGATCAGGT+GGG 0.593502 3.3:-60124899 MS.gene63319:CDS
GTCGATAACGATGGGAGTGG+TGG 0.594078 3.3:+60129985 None:intergenic
GTTTGAGAGAGTACCCAATA+CGG 0.594884 3.3:+60129945 None:intergenic
AAGTAGCTCCCAACCTGCTG+AGG 0.596677 3.3:-60125014 MS.gene63319:CDS
GGTCTGGCAGAAAGGAGCTA+AGG 0.597955 3.3:-60126663 MS.gene63319:intron
TGAAAATCTTCTTTGGTGAG+CGG 0.599646 3.3:+60124977 None:intergenic
GCGCCATTGTCGATAACGAT+GGG 0.599979 3.3:+60129977 None:intergenic
TAAGGGAGAAACAAGGTCAA+AGG 0.600031 3.3:-60126544 MS.gene63319:CDS
GAATGCTGCGTCAACACCAA+AGG 0.600730 3.3:+60127821 None:intergenic
GGACTGCACAACTTTACTAC+GGG 0.602389 3.3:+60126355 None:intergenic
GGATTGGAGTTGATCAGGTG+GGG 0.603330 3.3:-60124898 MS.gene63319:CDS
AAAAGCATACCGGAATCACA+TGG 0.605175 3.3:+60127724 None:intergenic
TGGATCATGGTCACCAACAA+TGG 0.605508 3.3:+60129569 None:intergenic
AATAGTTTGACAGGTAGTGT+TGG 0.609953 3.3:-60125418 MS.gene63319:CDS
TTGGTGAGCGGACGAACGCG+TGG 0.616384 3.3:+60124989 None:intergenic
CGGCCGCGACATAAAGCCAC+AGG 0.616729 3.3:-60129771 MS.gene63319:intron
ACAACTGCTGCCTTTGATCG+TGG 0.621156 3.3:-60125346 MS.gene63319:CDS
TGGCCGGGGTCTCAATGAGA+AGG 0.621786 3.3:-60124865 MS.gene63319:CDS
CCTGGAGCCTTGAAGAGATG+CGG 0.621822 3.3:+60125209 None:intergenic
CTGGATTGGAGTTGATCAGG+TGG 0.622971 3.3:-60124900 MS.gene63319:CDS
TTGCTTTCGAATGCTGATCG+TGG 0.623262 3.3:+60129510 None:intergenic
TTGACAGGTAGTGTTGGTCG+TGG 0.623337 3.3:-60125412 MS.gene63319:CDS
ATTGTCGATAACGATGGGAG+TGG 0.624254 3.3:+60129982 None:intergenic
AAGGAAACAACAGCTAGAAG+AGG 0.625342 3.3:-60125913 MS.gene63319:CDS
CTGGCAGAAAGGAGCTAAGG+AGG 0.626277 3.3:-60126660 MS.gene63319:intron
AATTCCATACTTGTGACTGG+TGG 0.627990 3.3:-60124803 MS.gene63319:CDS
AGCGCCATTGTCGATAACGA+TGG 0.629390 3.3:+60129976 None:intergenic
CCAGGCGTTCAATGATGCCA+GGG 0.631341 3.3:+60124768 None:intergenic
TCCACACACAAACATTCACT+AGG 0.632292 3.3:-60124631 MS.gene63319:CDS
TAACCTTCTCATTGAGACCC+CGG 0.634694 3.3:+60124862 None:intergenic
CAAAGGCAGCAGTTGTCAGG+AGG 0.634784 3.3:+60125353 None:intergenic
GCAATCTCTTCCTCAGAAGG+AGG 0.635472 3.3:+60126581 None:intergenic
TCCTAGTGAATGTTTGTGTG+TGG 0.637957 3.3:+60124630 None:intergenic
ACTCCCATCGTTATCGACAA+TGG 0.639040 3.3:-60129980 MS.gene63319:CDS
ATACCTGTGGCTTTATGTCG+CGG 0.641067 3.3:+60129768 None:intergenic
GAAGGAGGCTCCTCAACTGG+AGG 0.645561 3.3:+60126596 None:intergenic
GAGAAATGGCTGAGGCGAAG+AGG 0.646132 3.3:-60126517 MS.gene63319:CDS
ATGTTTGTGTGTGGAAACCA+GGG 0.651346 3.3:+60124639 None:intergenic
AAGGTTGCGAGAAATGGCTG+AGG 0.651418 3.3:-60126525 MS.gene63319:CDS
GTAAAGTTGTGCAGTCCTTG+CGG 0.652419 3.3:-60126349 MS.gene63319:CDS
AAACGACTCAAAACAAATGG+AGG 0.653455 3.3:-60125463 MS.gene63319:CDS
AATGGGTGCAACAGGATCAG+GGG 0.654606 3.3:-60128786 MS.gene63319:intron
ATACAGGGCTAGATTTACAT+GGG 0.656838 3.3:-60126828 MS.gene63319:intron
ATTTCCATTTCCATTCGTGG+AGG 0.662358 3.3:+60125438 None:intergenic
GCTATGAAGAGGAATTGGAA+AGG 0.664977 3.3:-60125938 MS.gene63319:CDS
CCGGTTATGGATGCATGGCG+TGG 0.666067 3.3:-60124683 MS.gene63319:CDS
AAAGCATACCGGAATCACAT+GGG 0.672651 3.3:+60127725 None:intergenic
CGATGACGATGAACCAGATG+AGG 0.674955 3.3:-60125248 MS.gene63319:CDS
GGGGTTAGATGAGATGGCCG+GGG 0.683662 3.3:-60124879 MS.gene63319:CDS
TTCCTGCCTAGAGACATAGC+CGG 0.686779 3.3:+60126388 None:intergenic
TTAAATCTATGTCCGATGGG+AGG 0.689589 3.3:-60125980 MS.gene63319:CDS
GTATACGCTTATAAACATCC+CGG 0.690841 3.3:-60126270 MS.gene63319:CDS
CATCCCGGATGACATGCTGA+CGG 0.695168 3.3:-60126255 MS.gene63319:CDS
GCAGCAATAAGGGAGAAACA+AGG 0.705579 3.3:-60126551 MS.gene63319:CDS
GAGCTGGAAAATGAATTACG+TGG 0.728785 3.3:-60126479 MS.gene63319:CDS
ATTCGGATGATTAGACCCTG+CGG 0.743477 3.3:-60124737 MS.gene63319:CDS
TGTTTGTGTGTGGAAACCAG+GGG 0.796872 3.3:+60124640 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATAAATTTTTAAATAAAT+AGG - chr3.3:60127427-60127446 MS.gene63319:intron 0.0%
!!! AATTTTGAATATTTTCATCA+TGG - chr3.3:60124714-60124733 MS.gene63319:CDS 15.0%
!!! ATTTTGAATATTTTCATCAT+GGG - chr3.3:60124715-60124734 MS.gene63319:CDS 15.0%
!!! CAATATTCTAAGAAATTATT+TGG + chr3.3:60128523-60128542 None:intergenic 15.0%
!!! TTCTTTTTTTTTTTTTTGCT+TGG - chr3.3:60128470-60128489 MS.gene63319:intron 15.0%
!! AACATTGTTAAAAAAACTGT+AGG - chr3.3:60127355-60127374 MS.gene63319:intron 20.0%
!! AATATGAATAGTTTCTAACT+AGG - chr3.3:60125374-60125393 MS.gene63319:CDS 20.0%
!! ACATTGTTAAAAAAACTGTA+GGG - chr3.3:60127356-60127375 MS.gene63319:intron 20.0%
!! ATAAAAAAACACTTTACTCA+TGG + chr3.3:60125850-60125869 None:intergenic 20.0%
!! ATATGAATAGTTTCTAACTA+GGG - chr3.3:60125375-60125394 MS.gene63319:CDS 20.0%
!! CTTATTAAATTCTCAATACA+GGG - chr3.3:60127762-60127781 MS.gene63319:CDS 20.0%
!! TAAGAAATAGTACGTATTTA+GGG + chr3.3:60127739-60127758 None:intergenic 20.0%
!! TACTTGTTCATATTACAAAA+AGG + chr3.3:60125517-60125536 None:intergenic 20.0%
!! TATTACATATTATGGGAATA+TGG - chr3.3:60125682-60125701 MS.gene63319:intron 20.0%
!! TATTCCCATAATATGTAATA+TGG + chr3.3:60125682-60125701 None:intergenic 20.0%
!! TCTTATTAAATTCTCAATAC+AGG - chr3.3:60127761-60127780 MS.gene63319:CDS 20.0%
!! TGTACCATATTACATATTAT+GGG - chr3.3:60125675-60125694 MS.gene63319:intron 20.0%
!! TTATTAACACTTTACACATT+TGG + chr3.3:60127518-60127537 None:intergenic 20.0%
!! TTGTAATATGAACAAGTAAA+TGG - chr3.3:60125519-60125538 MS.gene63319:CDS 20.0%
!!! TGTTTTTCAGTTTGAAATAA+TGG - chr3.3:60125121-60125140 MS.gene63319:intron 20.0%
!!! TTATATTTTCAGTTTGTTGA+CGG - chr3.3:60127572-60127591 MS.gene63319:intron 20.0%
!!! TTATGCTATTTGCTTTATTA+AGG - chr3.3:60126903-60126922 MS.gene63319:intron 20.0%
!!! TTGCTTTATTAAGGATTTTA+TGG - chr3.3:60126912-60126931 MS.gene63319:intron 20.0%
!!! TTTTTGGTGAATTTTTAGAT+GGG - chr3.3:60124767-60124786 MS.gene63319:CDS 20.0%
! AAAAAATCCTGTTGATATGT+TGG - chr3.3:60129528-60129547 MS.gene63319:CDS 25.0%
! AAACTATCAGAGTAACTATT+AGG - chr3.3:60127130-60127149 MS.gene63319:intron 25.0%
! AACAATCTGAAAATCTTCTT+TGG + chr3.3:60129638-60129657 None:intergenic 25.0%
! AACATGTATTTACAAAACCA+AGG + chr3.3:60126292-60126311 None:intergenic 25.0%
! AAGAAATAGTACGTATTTAG+GGG + chr3.3:60127738-60127757 None:intergenic 25.0%
! AAGTTCATAACAACTAGTTA+GGG - chr3.3:60125649-60125668 MS.gene63319:intron 25.0%
! AATATGGTCATTAATGTGTT+GGG - chr3.3:60125698-60125717 MS.gene63319:intron 25.0%
! ATGATATAAGCTGCAAATTA+TGG + chr3.3:60125962-60125981 None:intergenic 25.0%
! ATTAAGACTATAAGCACAAA+TGG + chr3.3:60128498-60128517 None:intergenic 25.0%
! ATTATGAAAAAGGTGAAGAT+TGG - chr3.3:60130004-60130023 MS.gene63319:CDS 25.0%
! CAAACATAAGGTTAATTGTT+GGG - chr3.3:60124957-60124976 MS.gene63319:CDS 25.0%
! CATCTAAAAATTCACCAAAA+AGG + chr3.3:60124768-60124787 None:intergenic 25.0%
! CATTGTTAAAAAAACTGTAG+GGG - chr3.3:60127357-60127376 MS.gene63319:intron 25.0%
! CTAAAACTAACACACAAAAA+TGG - chr3.3:60125464-60125483 MS.gene63319:CDS 25.0%
! GTAAGAAATAGTACGTATTT+AGG + chr3.3:60127740-60127759 None:intergenic 25.0%
! GTGTACCATATTACATATTA+TGG - chr3.3:60125674-60125693 MS.gene63319:intron 25.0%
! TAAGTTCATAACAACTAGTT+AGG - chr3.3:60125648-60125667 MS.gene63319:intron 25.0%
! TAATATTAAACTCCAATGGT+AGG - chr3.3:60125919-60125938 MS.gene63319:CDS 25.0%
! TATACTCACATAATTGTAAC+AGG + chr3.3:60125161-60125180 None:intergenic 25.0%
! TCAGTAATATTAAACTCCAA+TGG - chr3.3:60125915-60125934 MS.gene63319:CDS 25.0%
! TCATTCATATATGTCATACA+AGG + chr3.3:60125557-60125576 None:intergenic 25.0%
! TCTTAGAATATTGTTTACTG+TGG - chr3.3:60128530-60128549 MS.gene63319:intron 25.0%
! TGTTACAATTATGTGAGTAT+AGG - chr3.3:60125160-60125179 MS.gene63319:intron 25.0%
! TTCTATCATAAGCCATATTT+CGG + chr3.3:60127182-60127201 None:intergenic 25.0%
!! AAAGTATTAGTACCTATAGA+TGG + chr3.3:60126482-60126501 None:intergenic 25.0%
!! AAATAGCATAAAAAGCATAC+CGG + chr3.3:60126894-60126913 None:intergenic 25.0%
!! ATAGGATGAATCATTTTCAA+TGG - chr3.3:60127445-60127464 MS.gene63319:intron 25.0%
!! GAAGATTTTCAGATTGTTTT+CGG - chr3.3:60129640-60129659 MS.gene63319:intron 25.0%
!! GAATTTCTTTTGAATCAACT+TGG - chr3.3:60128153-60128172 MS.gene63319:CDS 25.0%
!! GCATTGTACATGTAATTTTA+TGG - chr3.3:60126729-60126748 MS.gene63319:intron 25.0%
!! TGTTGATATCTGTTTAAGTT+AGG - chr3.3:60126707-60126726 MS.gene63319:intron 25.0%
!!! AATACTTTTTAACCCTACAA+TGG - chr3.3:60126494-60126513 MS.gene63319:CDS 25.0%
!!! AGGATGGATTATTATGAAAA+AGG - chr3.3:60129994-60130013 MS.gene63319:CDS 25.0%
!!! AGTGCTCTAACTATTTTTAT+AGG + chr3.3:60129898-60129917 None:intergenic 25.0%
!!! CATTTTTGTGTGTTAGTTTT+AGG + chr3.3:60125466-60125485 None:intergenic 25.0%
!!! CTTTTTGGTGAATTTTTAGA+TGG - chr3.3:60124766-60124785 MS.gene63319:CDS 25.0%
!!! TATATTTTCAGTTTGTTGAC+GGG - chr3.3:60127573-60127592 MS.gene63319:intron 25.0%
!!! TGCTTTAAAATGTTTCTGAT+TGG - chr3.3:60129022-60129041 MS.gene63319:intron 25.0%
!!! TGTTGTTGTTGCTTTATTTA+AGG - chr3.3:60127262-60127281 MS.gene63319:intron 25.0%
AACAGTAGAAAAACTTAGAC+GGG + chr3.3:60127898-60127917 None:intergenic 30.0%
AAGACTTATACGCCATTTAA+TGG - chr3.3:60127921-60127940 MS.gene63319:intron 30.0%
AAGCTACAAGCATATTTGAA+GGG + chr3.3:60128452-60128471 None:intergenic 30.0%
AAGCTTACTAAGTTCCTTAA+TGG - chr3.3:60128890-60128909 MS.gene63319:intron 30.0%
AATGAGAAGGTTATCATGTA+AGG - chr3.3:60129753-60129772 MS.gene63319:intron 30.0%
AGAAAACTGGCTAAATCTTT+AGG - chr3.3:60128918-60128937 MS.gene63319:intron 30.0%
AGAATTGGAAATTGTAGTTG+TGG - chr3.3:60125245-60125264 MS.gene63319:CDS 30.0%
AGAGTTGGAAATTAATGAGT+TGG - chr3.3:60127155-60127174 MS.gene63319:intron 30.0%
AGCTTACTAAGTTCCTTAAT+GGG - chr3.3:60128891-60128910 MS.gene63319:intron 30.0%
AGCTTGAATAAATTGAAGCA+TGG + chr3.3:60128735-60128754 None:intergenic 30.0%
AGTAACTATTAGGAAAGAGT+TGG - chr3.3:60127140-60127159 MS.gene63319:intron 30.0%
AGTTCAATCTCGAAGTAAAA+TGG - chr3.3:60126427-60126446 MS.gene63319:CDS 30.0%
CAAAGTTGACAATGTTTGTT+GGG - chr3.3:60128557-60128576 MS.gene63319:intron 30.0%
CAATTAAATCTATGTCCGAT+GGG - chr3.3:60128622-60128641 MS.gene63319:intron 30.0%
CATAAGTTCAAACCTATCTA+TGG + chr3.3:60125303-60125322 None:intergenic 30.0%
CTCCTTATTACAGAATCTAT+AGG + chr3.3:60127069-60127088 None:intergenic 30.0%
CTTTGGACATTCTTAACATA+GGG - chr3.3:60129048-60129067 MS.gene63319:intron 30.0%
GAAACTATTCATATTGCTTG+TGG + chr3.3:60125369-60125388 None:intergenic 30.0%
GAACAGTAGAAAAACTTAGA+CGG + chr3.3:60127899-60127918 None:intergenic 30.0%
GAATATGGTCATTAATGTGT+TGG - chr3.3:60125697-60125716 MS.gene63319:intron 30.0%
GAATTGGAAATTGTAGTTGT+GGG - chr3.3:60125246-60125265 MS.gene63319:CDS 30.0%
GACCTATAGATTCTGTAATA+AGG - chr3.3:60127064-60127083 MS.gene63319:intron 30.0%
GCAAACATAAGGTTAATTGT+TGG - chr3.3:60124956-60124975 MS.gene63319:CDS 30.0%
GTCATCAAAAATAAATGAGC+TGG - chr3.3:60128110-60128129 MS.gene63319:intron 30.0%
GTCTATGTTTAGCAAACATA+AGG - chr3.3:60124945-60124964 MS.gene63319:CDS 30.0%
GTTATGAACTTATGAGCATA+TGG + chr3.3:60125640-60125659 None:intergenic 30.0%
TACAATTATGTGAGTATAGG+AGG - chr3.3:60125163-60125182 MS.gene63319:intron 30.0%
TAGTTTCTAACTAGGGAAAT+AGG - chr3.3:60125382-60125401 MS.gene63319:CDS 30.0%
TCAATTAAATCTATGTCCGA+TGG - chr3.3:60128621-60128640 MS.gene63319:intron 30.0%
TCTTGTGACATAGTTATTAC+TGG - chr3.3:60126663-60126682 MS.gene63319:intron 30.0%
TCTTTGGACATTCTTAACAT+AGG - chr3.3:60129047-60129066 MS.gene63319:intron 30.0%
TGAATTGAAGTGAGACAATA+AGG - chr3.3:60125574-60125593 MS.gene63319:intron 30.0%
TGGCTTATGATAGAACATTA+TGG - chr3.3:60127187-60127206 MS.gene63319:intron 30.0%
TTAAATGGCGTATAAGTCTT+AGG + chr3.3:60127921-60127940 None:intergenic 30.0%
TTGGACTGAACAAAATTTCA+GGG + chr3.3:60129684-60129703 None:intergenic 30.0%
TTTAACAATGTTTGTCTGTG+AGG + chr3.3:60127347-60127366 None:intergenic 30.0%
TTTCACACTCACATATGATA+AGG + chr3.3:60127686-60127705 None:intergenic 30.0%
TTTGGACTGAACAAAATTTC+AGG + chr3.3:60129685-60129704 None:intergenic 30.0%
! AAATTTTGTTCAGTCCAAAC+TGG - chr3.3:60129686-60129705 MS.gene63319:intron 30.0%
! ATTTTACTTCGAGATTGAAC+TGG + chr3.3:60126428-60126447 None:intergenic 30.0%
! ATTTTATGGTAAAGACGAGA+TGG - chr3.3:60126926-60126945 MS.gene63319:intron 30.0%
! CATTAATGTGTTGGGTTTTA+AGG - chr3.3:60125706-60125725 MS.gene63319:intron 30.0%
! GATGTTTTCATAAGCTATCT+TGG - chr3.3:60126068-60126087 MS.gene63319:intron 30.0%
! TGACATAGTTATTACTGGTT+TGG - chr3.3:60126668-60126687 MS.gene63319:intron 30.0%
! TTTTACTTCGAGATTGAACT+GGG + chr3.3:60126427-60126446 None:intergenic 30.0%
! TTTTATGGTAAAGACGAGAT+GGG - chr3.3:60126927-60126946 MS.gene63319:intron 30.0%
! TTTTCATTTACGAATAGACC+TGG + chr3.3:60126604-60126623 None:intergenic 30.0%
! TTTTTAACATTGTGTGACAC+AGG - chr3.3:60125002-60125021 MS.gene63319:CDS 30.0%
! TTTTTCGCAACATTGTTCAA+CGG - chr3.3:60124814-60124833 MS.gene63319:CDS 30.0%
!! ATGTTTCTGATTGGTTTCTT+TGG - chr3.3:60129031-60129050 MS.gene63319:intron 30.0%
!! CTTCAAAGTTTGTTCCTTTT+TGG - chr3.3:60124751-60124770 MS.gene63319:CDS 30.0%
!! GATTGTTTCTGGTAAGAAAT+AGG - chr3.3:60127863-60127882 MS.gene63319:intron 30.0%
!! TTTGATAGCTTGTTGAAAAG+AGG - chr3.3:60128589-60128608 MS.gene63319:intron 30.0%
!!! ATATTTTCAGTTTGTTGACG+GGG - chr3.3:60127574-60127593 MS.gene63319:intron 30.0%
!!! CACGTTTTGAAGTGAAATTA+GGG + chr3.3:60124685-60124704 None:intergenic 30.0%
!!! CCACATTTTGGTTTTTTCTT+CGG + chr3.3:60127971-60127990 None:intergenic 30.0%
!!! GAACTTCTTTTTGAGACTTA+TGG - chr3.3:60126452-60126471 MS.gene63319:CDS 30.0%
AAACGACTCAAAACAAATGG+AGG - chr3.3:60129142-60129161 MS.gene63319:intron 35.0%
AAGGCTCTTGTAAAAGATCA+AGG + chr3.3:60126526-60126545 None:intergenic 35.0%
AAGTTGCCAATCTTCATCTT+TGG + chr3.3:60129308-60129327 None:intergenic 35.0%
AATAAGGAGAGTAGATCAGA+TGG - chr3.3:60127080-60127099 MS.gene63319:intron 35.0%
AATACAGGGCTAGATTTACA+TGG - chr3.3:60127776-60127795 MS.gene63319:CDS 35.0%
AATAGTTTGACAGGTAGTGT+TGG - chr3.3:60129187-60129206 MS.gene63319:intron 35.0%
AATTGAAGCATGGAACATAC+AGG + chr3.3:60128725-60128744 None:intergenic 35.0%
AATTGTTCCAAGTAAAGCTC+TGG + chr3.3:60129079-60129098 None:intergenic 35.0%
ACAGTAGAAAAACTTAGACG+GGG + chr3.3:60127897-60127916 None:intergenic 35.0%
ACCTATAGTTGAAAAGATGG+TGG - chr3.3:60127005-60127024 MS.gene63319:CDS 35.0%
ACTAATTCCATACTTGTGAC+TGG - chr3.3:60129799-60129818 MS.gene63319:CDS 35.0%
ACTATTTCCATTTCCATTCG+TGG + chr3.3:60129173-60129192 None:intergenic 35.0%
ACTTATGGAGTTCCATCTAT+AGG - chr3.3:60126467-60126486 MS.gene63319:CDS 35.0%
AGCACCTATAGTTGAAAAGA+TGG - chr3.3:60127002-60127021 MS.gene63319:CDS 35.0%
ATACAGGGCTAGATTTACAT+GGG - chr3.3:60127777-60127796 MS.gene63319:CDS 35.0%
ATCATGTAAGGATGAAAAGC+TGG - chr3.3:60129765-60129784 MS.gene63319:intron 35.0%
ATGTCACAAGATGTCAAACA+TGG + chr3.3:60126654-60126673 None:intergenic 35.0%
ATTATGGTGTTCATCCAAAC+AGG + chr3.3:60125946-60125965 None:intergenic 35.0%
ATTGTTCCAAGTAAAGCTCT+GGG + chr3.3:60129078-60129097 None:intergenic 35.0%
CATAACAATGTTCCATCTTC+AGG + chr3.3:60127816-60127835 None:intergenic 35.0%
CATGAGAGTTCTTTGATACA+AGG + chr3.3:60129505-60129524 None:intergenic 35.0%
CCGAAGAAAAAACCAAAATG+TGG - chr3.3:60127968-60127987 MS.gene63319:intron 35.0%
CCTAATTTCACTTCAAAACG+TGG - chr3.3:60124683-60124702 MS.gene63319:CDS 35.0%
CCTATAGTTGAAAAGATGGT+GGG - chr3.3:60127006-60127025 MS.gene63319:CDS 35.0%
CGACAGCTTCCTTTATAAAT+TGG + chr3.3:60127602-60127621 None:intergenic 35.0%
CGTAAACGACTCAAAACAAA+TGG - chr3.3:60129139-60129158 MS.gene63319:intron 35.0%
CTATGAAGAGGAATTGGAAA+GGG - chr3.3:60128668-60128687 MS.gene63319:intron 35.0%
CTTACTAAGTTCCTTAATGG+GGG - chr3.3:60128893-60128912 MS.gene63319:intron 35.0%
GAAGCTACAAGCATATTTGA+AGG + chr3.3:60128453-60128472 None:intergenic 35.0%
GATGAAGAAAAAGATACCTG+TGG + chr3.3:60124853-60124872 None:intergenic 35.0%
GCAAAGTTGACAATGTTTGT+TGG - chr3.3:60128556-60128575 MS.gene63319:intron 35.0%
GCTTACTAAGTTCCTTAATG+GGG - chr3.3:60128892-60128911 MS.gene63319:intron 35.0%
GGAAAATGAATTACGTGGTT+TGG - chr3.3:60128131-60128150 MS.gene63319:intron 35.0%
GGAAATGGAAATAGTTTGAC+AGG - chr3.3:60129178-60129197 MS.gene63319:intron 35.0%
GGTATTCAGCTTAGTGAAAT+GGG - chr3.3:60128797-60128816 MS.gene63319:CDS 35.0%
GTATACGCTTATAAACATCC+CGG - chr3.3:60128335-60128354 MS.gene63319:intron 35.0%
TAACACTTTACACATTTGGC+AGG + chr3.3:60127514-60127533 None:intergenic 35.0%
TACCAAACCAACATATCAAC+AGG + chr3.3:60129538-60129557 None:intergenic 35.0%
TATCACAAACACTTCGTTGT+TGG + chr3.3:60126824-60126843 None:intergenic 35.0%
TCAAATAAGTCCATCCAAAC+AGG - chr3.3:60126201-60126220 MS.gene63319:intron 35.0%
TGAAAATCTTCTTTGGTGAG+CGG + chr3.3:60129631-60129650 None:intergenic 35.0%
TGAAGTGAGACAATAAGGTT+TGG - chr3.3:60125579-60125598 MS.gene63319:intron 35.0%
TGGTATTCAGCTTAGTGAAA+TGG - chr3.3:60128796-60128815 MS.gene63319:CDS 35.0%
TGTAGTTGTGGGAAAAAAGA+TGG - chr3.3:60125257-60125276 MS.gene63319:CDS 35.0%
TTATACGCCATTTAATGGTC+TGG - chr3.3:60127926-60127945 MS.gene63319:intron 35.0%
TTCATAACAACTAGTTAGGG+AGG - chr3.3:60125652-60125671 MS.gene63319:intron 35.0%
TTGCTATGAGTCATGTACTT+AGG - chr3.3:60125429-60125448 MS.gene63319:CDS 35.0%
TTTGGTAGGACACACTTTAA+AGG - chr3.3:60125597-60125616 MS.gene63319:intron 35.0%
! AATAGTTAGAGCACTTGATC+CGG - chr3.3:60129903-60129922 MS.gene63319:intron 35.0%
! AGATTGTTTTCGGAGTTGAA+AGG - chr3.3:60129650-60129669 MS.gene63319:intron 35.0%
! AGGTCGAGTCTTTTATAATG+TGG - chr3.3:60129421-60129440 MS.gene63319:intron 35.0%
! ATCCTGTTGATATGTTGGTT+TGG - chr3.3:60129533-60129552 MS.gene63319:CDS 35.0%
! CGAAGTGTTTGTGATAAAGA+TGG - chr3.3:60126828-60126847 MS.gene63319:intron 35.0%
! GTTGTTTCATCTTCAGATTC+TGG - chr3.3:60125780-60125799 MS.gene63319:intron 35.0%
! TAATGAGTTGGACCGAAATA+TGG - chr3.3:60127167-60127186 MS.gene63319:intron 35.0%
! TCAAAGTACTTCAACAATGC+TGG + chr3.3:60125059-60125078 None:intergenic 35.0%
! TTTTCGGAGTTGAAAGGTTT+AGG - chr3.3:60129656-60129675 MS.gene63319:intron 35.0%
!! GACTTTGCTTTTGATCGAAT+GGG - chr3.3:60125802-60125821 MS.gene63319:intron 35.0%
!! GATGTAGTGACCTATTTTGA+TGG - chr3.3:60125213-60125232 MS.gene63319:CDS 35.0%
!! TGTTGATATGTTGGTTTGGT+AGG - chr3.3:60129537-60129556 MS.gene63319:CDS 35.0%
!!! AACACGGCTAATTTTAGGTT+AGG + chr3.3:60129449-60129468 None:intergenic 35.0%
!!! CCACGTTTTGAAGTGAAATT+AGG + chr3.3:60124686-60124705 None:intergenic 35.0%
!!! TTGTTTTGAGTCGTTTACGT+TGG + chr3.3:60129138-60129157 None:intergenic 35.0%
AAAGCATACCGGAATCACAT+GGG + chr3.3:60126883-60126902 None:intergenic 40.0%
AAAGGTTGAAGACCTGAAGA+TGG - chr3.3:60127801-60127820 MS.gene63319:CDS 40.0%
AAGAGGAATTGGAAAGGGAA+AGG - chr3.3:60128673-60128692 MS.gene63319:intron 40.0%
AAGGAAACAACAGCTAGAAG+AGG - chr3.3:60128692-60128711 MS.gene63319:intron 40.0%
AATGTTTGTGTGTGGAAACC+AGG + chr3.3:60129970-60129989 None:intergenic 40.0%
AATTCCATACTTGTGACTGG+TGG - chr3.3:60129802-60129821 MS.gene63319:CDS 40.0%
ACAATTGCGTGCCAAATACA+AGG - chr3.3:60129093-60129112 MS.gene63319:intron 40.0%
ACACATTCTGTGATCAGGAT+AGG + chr3.3:60126398-60126417 None:intergenic 40.0%
ACCAACACATACACACAACA+CGG + chr3.3:60129465-60129484 None:intergenic 40.0%
ACTTCAACAATGCTGGATCA+TGG + chr3.3:60125052-60125071 None:intergenic 40.0%
AGGACTGCACAACTTTACTA+CGG + chr3.3:60128254-60128273 None:intergenic 40.0%
AGGTCACTACATCGATGAAA+AGG + chr3.3:60125206-60125225 None:intergenic 40.0%
ATAAAAGACTCGACCTAACC+TGG + chr3.3:60129417-60129436 None:intergenic 40.0%
ATAGGATGATCAATCTGCTC+TGG + chr3.3:60126380-60126399 None:intergenic 40.0%
ATATTCATGCGAGCAAGAGA+TGG - chr3.3:60128776-60128795 MS.gene63319:intron 40.0%
ATGTTGCGAAAAACAACACG+AGG + chr3.3:60124807-60124826 None:intergenic 40.0%
ATGTTTGTGTGTGGAAACCA+GGG + chr3.3:60129969-60129988 None:intergenic 40.0%
ATTTCCATTTCCATTCGTGG+AGG + chr3.3:60129170-60129189 None:intergenic 40.0%
CACACAAACATTCACTAGGA+TGG - chr3.3:60129978-60129997 MS.gene63319:CDS 40.0%
CATTTAATGGTCTGGCAGAA+AGG - chr3.3:60127934-60127953 MS.gene63319:intron 40.0%
CCTATCTATGGCAACAAAAC+AGG + chr3.3:60125291-60125310 None:intergenic 40.0%
CTTTCTGCCAGACCATTAAA+TGG + chr3.3:60127936-60127955 None:intergenic 40.0%
GACGGGGAACCAATTTATAA+AGG - chr3.3:60127590-60127609 MS.gene63319:intron 40.0%
GAGCTGGAAAATGAATTACG+TGG - chr3.3:60128126-60128145 MS.gene63319:intron 40.0%
GATCAACAACTGAACAACAC+AGG + chr3.3:60125331-60125350 None:intergenic 40.0%
GCTATGAAGAGGAATTGGAA+AGG - chr3.3:60128667-60128686 MS.gene63319:intron 40.0%
GGAAATAAGCTTAGGTGGTT+TGG - chr3.3:60127027-60127046 MS.gene63319:intron 40.0%
GGAACATTGTTATGTTGCAC+AGG - chr3.3:60127822-60127841 MS.gene63319:CDS 40.0%
GGAACTGAAGCGATTGTAAT+CGG + chr3.3:60124602-60124621 None:intergenic 40.0%
GGAGAAACTGTTACCATTGT+TGG - chr3.3:60125023-60125042 MS.gene63319:CDS 40.0%
GGCTAGATTTACATGGGAAA+AGG - chr3.3:60127783-60127802 MS.gene63319:CDS 40.0%
TAAGGGAGAAACAAGGTCAA+AGG - chr3.3:60128061-60128080 MS.gene63319:intron 40.0%
TACTTTGATTGTACTCGCTC+TGG - chr3.3:60125071-60125090 MS.gene63319:intron 40.0%
TCATAAGCTATCTTGGAGAG+CGG - chr3.3:60126075-60126094 MS.gene63319:intron 40.0%
TCATTTACGAATAGACCTGG+TGG + chr3.3:60126601-60126620 None:intergenic 40.0%
TCCACACACAAACATTCACT+AGG - chr3.3:60129974-60129993 MS.gene63319:CDS 40.0%
TCCTAGTGAATGTTTGTGTG+TGG + chr3.3:60129978-60129997 None:intergenic 40.0%
TGAAGCGATTGTAATCGGAT+TGG + chr3.3:60124597-60124616 None:intergenic 40.0%
TGACATGCAGCCATCAAAAT+AGG + chr3.3:60125226-60125245 None:intergenic 40.0%
TGATCAACTCCAATCCAGTT+TGG + chr3.3:60129703-60129722 None:intergenic 40.0%
TGCATACACATTCTGTGATC+AGG + chr3.3:60126403-60126422 None:intergenic 40.0%
TGCCAAATACAAGGACCTTT+CGG - chr3.3:60129102-60129121 MS.gene63319:intron 40.0%
TTAAATCTATGTCCGATGGG+AGG - chr3.3:60128625-60128644 MS.gene63319:intron 40.0%
TTCAGAAGCTCGATTGTTTC+TGG - chr3.3:60127852-60127871 MS.gene63319:intron 40.0%
TTGTTCAGTCCAAACTGGAT+TGG - chr3.3:60129691-60129710 MS.gene63319:intron 40.0%
TTTAGCAGCACACCAAAGTT+GGG + chr3.3:60126228-60126247 None:intergenic 40.0%
! AAAAGCATACCGGAATCACA+TGG + chr3.3:60126884-60126903 None:intergenic 40.0%
! AAACCTTTTCCCACTAAGTG+GGG + chr3.3:60127236-60127255 None:intergenic 40.0%
! AAACTGGATTGGAGTTGATC+AGG - chr3.3:60129702-60129721 MS.gene63319:intron 40.0%
! AGAGTACCCAATACGGAAAT+AGG + chr3.3:60124656-60124675 None:intergenic 40.0%
! AGCTTGGTAATAGCAAAAGC+AGG + chr3.3:60127713-60127732 None:intergenic 40.0%
! ATCAAGGCTTTTGCCATTGT+AGG + chr3.3:60126510-60126529 None:intergenic 40.0%
! ATTTGAAGGGTGTGATGACA+GGG + chr3.3:60128439-60128458 None:intergenic 40.0%
! ATTTTTATAGGCGAACCGCA+GGG + chr3.3:60129886-60129905 None:intergenic 40.0%
! CAAACCTTTTCCCACTAAGT+GGG + chr3.3:60127237-60127256 None:intergenic 40.0%
! CACACAACACGGCTAATTTT+AGG + chr3.3:60129454-60129473 None:intergenic 40.0%
! CACACTTTAAAGGTTGCAGA+TGG - chr3.3:60125607-60125626 MS.gene63319:intron 40.0%
! CCCACCATCTTTTCAACTAT+AGG + chr3.3:60127009-60127028 None:intergenic 40.0%
! GTGAGACAATAAGGTTTGGT+AGG - chr3.3:60125583-60125602 MS.gene63319:intron 40.0%
! GTTGGTCAATTTTCTCCGAA+AGG + chr3.3:60129120-60129139 None:intergenic 40.0%
! GTTGTGTGTATGTGTTGGTA+TGG - chr3.3:60129466-60129485 MS.gene63319:intron 40.0%
! TATTTGAAGGGTGTGATGAC+AGG + chr3.3:60128440-60128459 None:intergenic 40.0%
! TCAAGGCTTTTGCCATTGTA+GGG + chr3.3:60126509-60126528 None:intergenic 40.0%
! TGTTTTGCAGAGTTGCTTGT+AGG - chr3.3:60127478-60127497 MS.gene63319:intron 40.0%
!! AAAACAGAAGCGCTATGAAG+AGG - chr3.3:60128656-60128675 MS.gene63319:intron 40.0%
!! AGATGGTGGGAAATAAGCTT+AGG - chr3.3:60127019-60127038 MS.gene63319:CDS 40.0%
!! CCTGTTTTGTTGCCATAGAT+AGG - chr3.3:60125288-60125307 MS.gene63319:CDS 40.0%
!! CGCTTCTGTTTCTACTACTA+AGG + chr3.3:60126545-60126564 None:intergenic 40.0%
!! CGTTGGATTTTGGAGATGAA+AGG + chr3.3:60124574-60124593 None:intergenic 40.0%
!! CTGGCTAAATCTTTAGGACA+AGG - chr3.3:60128924-60128943 MS.gene63319:intron 40.0%
!! GGACTTTGCTTTTGATCGAA+TGG - chr3.3:60125801-60125820 MS.gene63319:intron 40.0%
!! GTTTGAGAGAGTACCCAATA+CGG + chr3.3:60124663-60124682 None:intergenic 40.0%
!! TACGTATTTAGGGGTTAGCT+TGG + chr3.3:60127729-60127748 None:intergenic 40.0%
!! TATGTTGGTTTGGTAGGACT+TGG - chr3.3:60129543-60129562 MS.gene63319:CDS 40.0%
!! TATTTTTATAGGCGAACCGC+AGG + chr3.3:60129887-60129906 None:intergenic 40.0%
!! TGGTGAATTTTTAGATGGGC+TGG - chr3.3:60124771-60124790 MS.gene63319:CDS 40.0%
!! TTGGTGCCAAAGATGAAGAT+TGG - chr3.3:60129299-60129318 MS.gene63319:intron 40.0%
AAGATTGGGCATAAGGCAAC+AGG + chr3.3:60126576-60126595 None:intergenic 45.0%
AAGGAGAGTAGATCAGATGG+AGG - chr3.3:60127083-60127102 MS.gene63319:intron 45.0%
ACTCCCATCGTTATCGACAA+TGG - chr3.3:60124625-60124644 MS.gene63319:CDS 45.0%
AGAGAGAGAGAGAGAGAGTT+GGG - chr3.3:60126977-60126996 MS.gene63319:CDS 45.0%
AGCTCTGTGTTATCCTCATC+TGG + chr3.3:60129373-60129392 None:intergenic 45.0%
AGCTGTCGCACTAATATTGG+TGG - chr3.3:60127614-60127633 MS.gene63319:intron 45.0%
AGGTCAAAGGTTGCGAGAAA+TGG - chr3.3:60128074-60128093 MS.gene63319:intron 45.0%
ATCCAAACAGGACCTACCAT+TGG + chr3.3:60125934-60125953 None:intergenic 45.0%
ATTCGGATGATTAGACCCTG+CGG - chr3.3:60129868-60129887 MS.gene63319:intron 45.0%
ATTGTCGATAACGATGGGAG+TGG + chr3.3:60124626-60124645 None:intergenic 45.0%
CAAAATGTGGCAGCTCCATT+GGG - chr3.3:60127981-60128000 MS.gene63319:intron 45.0%
CAGTCCTTGCGGAAACAAAA+AGG - chr3.3:60128267-60128286 MS.gene63319:intron 45.0%
CCACTTAGTGGGAAAAGGTT+TGG - chr3.3:60127235-60127254 MS.gene63319:intron 45.0%
CTCCGAAAGGTCCTTGTATT+TGG + chr3.3:60129107-60129126 None:intergenic 45.0%
CTTAATGGGGGAGAGAAAAC+TGG - chr3.3:60128905-60128924 MS.gene63319:intron 45.0%
GCACGACTTCAATCTTGACA+AGG - chr3.3:60128963-60128982 MS.gene63319:intron 45.0%
GCAGCAATAAGGGAGAAACA+AGG - chr3.3:60128054-60128073 MS.gene63319:intron 45.0%
GCGCTTCCTATTTCCGTATT+GGG - chr3.3:60124647-60124666 MS.gene63319:CDS 45.0%
GGAAGCTGTCGCACTAATAT+TGG - chr3.3:60127611-60127630 MS.gene63319:intron 45.0%
GGACTGCACAACTTTACTAC+GGG + chr3.3:60128253-60128272 None:intergenic 45.0%
GTAAAGTTGTGCAGTCCTTG+CGG - chr3.3:60128256-60128275 MS.gene63319:intron 45.0%
GTTTAGCAGCACACCAAAGT+TGG + chr3.3:60126229-60126248 None:intergenic 45.0%
TAACCTTCTCATTGAGACCC+CGG + chr3.3:60129746-60129765 None:intergenic 45.0%
TCTACCTTGGGCACAAATGT+TGG + chr3.3:60129571-60129590 None:intergenic 45.0%
TGAGGAAGAGATTGCGAGAA+AGG - chr3.3:60128032-60128051 MS.gene63319:intron 45.0%
TGATGGCTGCATGTCAGAAT+TGG - chr3.3:60125230-60125249 MS.gene63319:CDS 45.0%
TGCGAGAAAGGCAGCAATAA+GGG - chr3.3:60128044-60128063 MS.gene63319:intron 45.0%
TGGATCATGGTCACCAACAA+TGG + chr3.3:60125039-60125058 None:intergenic 45.0%
TGGTAAAGACGAGATGGGAT+AGG - chr3.3:60126932-60126951 MS.gene63319:intron 45.0%
TGGTGGGAAATAAGCTTAGG+TGG - chr3.3:60127022-60127041 MS.gene63319:CDS 45.0%
TGTTTGTGTGTGGAAACCAG+GGG + chr3.3:60129968-60129987 None:intergenic 45.0%
TTAGCAGCACACCAAAGTTG+GGG + chr3.3:60126227-60126246 None:intergenic 45.0%
TTGATCCGGTTATGGATGCA+TGG - chr3.3:60129917-60129936 MS.gene63319:intron 45.0%
TTGCGAGAAAGGCAGCAATA+AGG - chr3.3:60128043-60128062 MS.gene63319:intron 45.0%
TTGCTTTCGAATGCTGATCG+TGG + chr3.3:60125098-60125117 None:intergenic 45.0%
TTTGATCGAATGGGTGCAAC+AGG - chr3.3:60125811-60125830 MS.gene63319:intron 45.0%
! ATAGACCTGGTGGTGAAGAT+TGG + chr3.3:60126591-60126610 None:intergenic 45.0%
! ATTGCTTGTGGCGTTCGTTT+TGG + chr3.3:60125357-60125376 None:intergenic 45.0%
! CAGTTTTCTCTCCCCCATTA+AGG + chr3.3:60128907-60128926 None:intergenic 45.0%
! CCAAACCTTTTCCCACTAAG+TGG + chr3.3:60127238-60127257 None:intergenic 45.0%
! CTTTGGTGTGCTGCTAAACT+TGG - chr3.3:60126230-60126249 MS.gene63319:intron 45.0%
! GAAGCGCTATGAAGAGGAAT+TGG - chr3.3:60128662-60128681 MS.gene63319:intron 45.0%
! TAGACCTGGTGGTGAAGATT+GGG + chr3.3:60126590-60126609 None:intergenic 45.0%
! TAGAGCACTTGATCCGGTTA+TGG - chr3.3:60129909-60129928 MS.gene63319:intron 45.0%
! TGGATTGGAGTTGATCAGGT+GGG - chr3.3:60129706-60129725 MS.gene63319:intron 45.0%
! TGGGAGCTACTTTCTACCTT+GGG + chr3.3:60129583-60129602 None:intergenic 45.0%
! TTGGGAGCTACTTTCTACCT+TGG + chr3.3:60129584-60129603 None:intergenic 45.0%
! TTTTAATCGCTGCCTCCCAT+CGG + chr3.3:60128640-60128659 None:intergenic 45.0%
!! ATACCTGTGGCTTTATGTCG+CGG + chr3.3:60124840-60124859 None:intergenic 45.0%
!! ATCGTGTGGTGTTGTTACCT+TGG - chr3.3:60126256-60126275 MS.gene63319:CDS 45.0%
!! CTCACCTTTTTGTTTCCGCA+AGG + chr3.3:60128274-60128293 None:intergenic 45.0%
!! GATTGTAATCGGATTGGCGT+TGG + chr3.3:60124591-60124610 None:intergenic 45.0%
!! TGGTGTTGTTACCTTGGACT+TGG - chr3.3:60126262-60126281 MS.gene63319:CDS 45.0%
!!! ATCGGATTGGCGTTGGATTT+TGG + chr3.3:60124584-60124603 None:intergenic 45.0%
!! TAAAAAACTAAAATAAAAAA+TGG - chr3.3:60127393-60127412 MS.gene63319:intron 5.0%
AAAGTTGGGGCCTGTTTGGA+TGG + chr3.3:60126214-60126233 None:intergenic 50.0%
AACGCCTGGAAGCTGGAATT+CGG - chr3.3:60129851-60129870 MS.gene63319:intron 50.0%
AAGGTTGCGAGAAATGGCTG+AGG - chr3.3:60128080-60128099 MS.gene63319:intron 50.0%
AATGGGTGCAACAGGATCAG+GGG - chr3.3:60125819-60125838 MS.gene63319:intron 50.0%
ACAACTGCTGCCTTTGATCG+TGG - chr3.3:60129259-60129278 MS.gene63319:intron 50.0%
ACCAAGGAACTCCAAGTCCA+AGG + chr3.3:60126276-60126295 None:intergenic 50.0%
ACCTTGGACTTGGAGTTCCT+TGG - chr3.3:60126272-60126291 MS.gene63319:CDS 50.0%
AGCGCCATTGTCGATAACGA+TGG + chr3.3:60124632-60124651 None:intergenic 50.0%
ATAGCCGGTCTCTGCTAAGA+AGG + chr3.3:60128205-60128224 None:intergenic 50.0%
ATCATTGAACGCCTGGAAGC+TGG - chr3.3:60129844-60129863 MS.gene63319:intron 50.0%
ATCCAAACAGGCCCCAACTT+TGG - chr3.3:60126213-60126232 MS.gene63319:intron 50.0%
CCAAAATGTGGCAGCTCCAT+TGG - chr3.3:60127980-60127999 MS.gene63319:intron 50.0%
CGATCCTTCTTAGCAGAGAC+CGG - chr3.3:60128198-60128217 MS.gene63319:CDS 50.0%
CGATGACGATGAACCAGATG+AGG - chr3.3:60129357-60129376 MS.gene63319:intron 50.0%
CGCTACAACCCATGTGATTC+CGG - chr3.3:60126872-60126891 MS.gene63319:intron 50.0%
CTCCAATGGTAGGTCCTGTT+TGG - chr3.3:60125929-60125948 MS.gene63319:CDS 50.0%
CTCGCAATCTCTTCCTCAGA+AGG + chr3.3:60128030-60128049 None:intergenic 50.0%
GAATGCTGCGTCAACACCAA+AGG + chr3.3:60126787-60126806 None:intergenic 50.0%
GAATGGGTGCAACAGGATCA+GGG - chr3.3:60125818-60125837 MS.gene63319:intron 50.0%
GAGAGAGAGAGAGAGAGAGT+TGG - chr3.3:60126976-60126995 MS.gene63319:CDS 50.0%
GATCAAAGGCAGCAGTTGTC+AGG + chr3.3:60129258-60129277 None:intergenic 50.0%
GCAATCTCTTCCTCAGAAGG+AGG + chr3.3:60128027-60128046 None:intergenic 50.0%
GCCGTGTTGTGTGTATGTGT+TGG - chr3.3:60129461-60129480 MS.gene63319:intron 50.0%
GCGCCATTGTCGATAACGAT+GGG + chr3.3:60124631-60124650 None:intergenic 50.0%
GCTGCCTTTGATCGTGGTAA+GGG - chr3.3:60129265-60129284 MS.gene63319:intron 50.0%
GCTTCCACCAGTCACAAGTA+TGG + chr3.3:60129809-60129828 None:intergenic 50.0%
GGAGAACCCAGAGCTTTACT+TGG - chr3.3:60129069-60129088 MS.gene63319:intron 50.0%
GGATCCAACATTTGTGCCCA+AGG - chr3.3:60129564-60129583 MS.gene63319:CDS 50.0%
GGCGCTTCCTATTTCCGTAT+TGG - chr3.3:60124646-60124665 MS.gene63319:CDS 50.0%
GGTAAGGGCGAGGATACATT+TGG - chr3.3:60129280-60129299 MS.gene63319:intron 50.0%
GGTGGTGAAGATTGGGCATA+AGG + chr3.3:60126583-60126602 None:intergenic 50.0%
TATGCCCAATCTTCACCACC+AGG - chr3.3:60126583-60126602 MS.gene63319:CDS 50.0%
TCAGGTGGGGTTAGATGAGA+TGG - chr3.3:60129720-60129739 MS.gene63319:intron 50.0%
TCATCCGAATTCCAGCTTCC+AGG + chr3.3:60129858-60129877 None:intergenic 50.0%
TCTCTTCAAGGCTCCAGGTT+AGG - chr3.3:60129401-60129420 MS.gene63319:intron 50.0%
TGCTGCCTTTGATCGTGGTA+AGG - chr3.3:60129264-60129283 MS.gene63319:intron 50.0%
TTCCTGCCTAGAGACATAGC+CGG + chr3.3:60128220-60128239 None:intergenic 50.0%
TTCTCATTAGACGCAGCGTC+AGG + chr3.3:60128315-60128334 None:intergenic 50.0%
! ACATGGGTTGTAGCGAATCC+AGG + chr3.3:60126867-60126886 None:intergenic 50.0%
! AGAGACTCAGTGCTGCTCAA+AGG - chr3.3:60129218-60129237 MS.gene63319:intron 50.0%
! CCAATGGAGCTGCCACATTT+TGG + chr3.3:60127983-60128002 None:intergenic 50.0%
! CTGGATTGGAGTTGATCAGG+TGG - chr3.3:60129705-60129724 MS.gene63319:intron 50.0%
! CTTTTCCCACTAAGTGGGGT+CGG + chr3.3:60127232-60127251 None:intergenic 50.0%
! GAGACTCAGTGCTGCTCAAA+GGG - chr3.3:60129219-60129238 MS.gene63319:intron 50.0%
! GATGGTCTTGCTATGTGTCC+TGG - chr3.3:60126846-60126865 MS.gene63319:intron 50.0%
! GCTAAACTTGGTGGATCGTG+TGG - chr3.3:60126242-60126261 MS.gene63319:intron 50.0%
! GGATTGGAGTTGATCAGGTG+GGG - chr3.3:60129707-60129726 MS.gene63319:intron 50.0%
! TGGTGTGCTGCTAAACTTGG+TGG - chr3.3:60126233-60126252 MS.gene63319:intron 50.0%
! TTTTCTGCCATGCCAGCCTT+TGG - chr3.3:60126768-60126787 MS.gene63319:CDS 50.0%
!! TTGACAGGTAGTGTTGGTCG+TGG - chr3.3:60129193-60129212 MS.gene63319:intron 50.0%
AAGTAGCTCCCAACCTGCTG+AGG - chr3.3:60129591-60129610 MS.gene63319:intron 55.0%
AATGGAGGCTCCTCCACGAA+TGG - chr3.3:60129157-60129176 MS.gene63319:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr3.3:60127224-60127243 None:intergenic 55.0%
AGCTTGCCCGCATCTCTTCA+AGG - chr3.3:60129389-60129408 MS.gene63319:intron 55.0%
AGTTGAGGAGCCTCCTTCTG+AGG - chr3.3:60128014-60128033 MS.gene63319:intron 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr3.3:60127223-60127242 MS.gene63319:intron 55.0%
CAAAGGCAGCAGTTGTCAGG+AGG + chr3.3:60129255-60129274 None:intergenic 55.0%
CACCAAAGTTGGGGCCTGTT+TGG + chr3.3:60126218-60126237 None:intergenic 55.0%
CAGAGACCGGCTATGTCTCT+AGG - chr3.3:60128211-60128230 MS.gene63319:CDS 55.0%
CATCCCGGATGACATGCTGA+CGG - chr3.3:60128350-60128369 MS.gene63319:intron 55.0%
CCACGCCATGCATCCATAAC+CGG + chr3.3:60129925-60129944 None:intergenic 55.0%
CCAGGCGTTCAATGATGCCA+GGG + chr3.3:60129840-60129859 None:intergenic 55.0%
CCTGGAGCCTTGAAGAGATG+CGG + chr3.3:60129399-60129418 None:intergenic 55.0%
CGAATGGGTGCAACAGGATC+AGG - chr3.3:60125817-60125836 MS.gene63319:intron 55.0%
CGACCCCACTTAGTGGGAAA+AGG - chr3.3:60127230-60127249 MS.gene63319:intron 55.0%
CTCGCCCTTACCACGATCAA+AGG + chr3.3:60129272-60129291 None:intergenic 55.0%
CTGGAGCCTTGAAGAGATGC+GGG + chr3.3:60129398-60129417 None:intergenic 55.0%
CTGGCAGAAAGGAGCTAAGG+AGG - chr3.3:60127945-60127964 MS.gene63319:intron 55.0%
CTTTGATCGTGGTAAGGGCG+AGG - chr3.3:60129270-60129289 MS.gene63319:intron 55.0%
GAGAAATGGCTGAGGCGAAG+AGG - chr3.3:60128088-60128107 MS.gene63319:intron 55.0%
GGCTCCTCCACGAATGGAAA+TGG - chr3.3:60129163-60129182 MS.gene63319:intron 55.0%
GGTCTGGCAGAAAGGAGCTA+AGG - chr3.3:60127942-60127961 MS.gene63319:intron 55.0%
GTCAACACCAAAGGCTGGCA+TGG + chr3.3:60126778-60126797 None:intergenic 55.0%
GTCGATAACGATGGGAGTGG+TGG + chr3.3:60124623-60124642 None:intergenic 55.0%
GTGCAACAGGATCAGGGGTA+TGG - chr3.3:60125824-60125843 MS.gene63319:intron 55.0%
GTGGGGTTAGATGAGATGGC+CGG - chr3.3:60129724-60129743 MS.gene63319:intron 55.0%
TCAGAAGGAGGCTCCTCAAC+TGG + chr3.3:60128015-60128034 None:intergenic 55.0%
TCCAGGCGTTCAATGATGCC+AGG + chr3.3:60129841-60129860 None:intergenic 55.0%
TCTGCCGTCAGCATGTCATC+CGG + chr3.3:60128357-60128376 None:intergenic 55.0%
TCTGCTTATGCATCAGCCCC+TGG - chr3.3:60129949-60129968 MS.gene63319:intron 55.0%
TGGGGTTAGATGAGATGGCC+GGG - chr3.3:60129725-60129744 MS.gene63319:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr3.3:60127224-60127243 MS.gene63319:intron 55.0%
! GGTGGAAGCTCTCTTTTCCC+TGG - chr3.3:60129820-60129839 MS.gene63319:CDS 55.0%
CAACTGGAGGTGGCACCCAA+TGG + chr3.3:60127999-60128018 None:intergenic 60.0%
CCCTGGCATCATTGAACGCC+TGG - chr3.3:60129837-60129856 MS.gene63319:intron 60.0%
CCGCATCTCTTCAAGGCTCC+AGG - chr3.3:60129396-60129415 MS.gene63319:intron 60.0%
CCGGTTATGGATGCATGGCG+TGG - chr3.3:60129922-60129941 MS.gene63319:intron 60.0%
CTGCCGTCAGCATGTCATCC+GGG + chr3.3:60128356-60128375 None:intergenic 60.0%
GAAGGAGGCTCCTCAACTGG+AGG + chr3.3:60128012-60128031 None:intergenic 60.0%
GACCGGCTATGTCTCTAGGC+AGG - chr3.3:60128215-60128234 MS.gene63319:CDS 60.0%
GCTGCGTCAACACCAAAGGC+TGG + chr3.3:60126783-60126802 None:intergenic 60.0%
GGGGTTAGATGAGATGGCCG+GGG - chr3.3:60129726-60129745 MS.gene63319:intron 60.0%
TGACATGCTGACGGCAGAGC+AGG - chr3.3:60128359-60128378 MS.gene63319:intron 60.0%
TGGCCGGGGTCTCAATGAGA+AGG - chr3.3:60129740-60129759 MS.gene63319:intron 60.0%
! TTGGGTGCCACCTCCAGTTG+AGG - chr3.3:60127999-60128018 MS.gene63319:intron 60.0%
CGGCCGCGACATAAAGCCAC+AGG - chr3.3:60124834-60124853 MS.gene63319:CDS 65.0%
GGAGGCTCCTCAACTGGAGG+TGG + chr3.3:60128009-60128028 None:intergenic 65.0%
TTGGTGAGCGGACGAACGCG+TGG + chr3.3:60129619-60129638 None:intergenic 65.0%
GCGTGGCGCCTCAGCAGGTT+GGG + chr3.3:60129602-60129621 None:intergenic 70.0%
CGAACGCGTGGCGCCTCAGC+AGG + chr3.3:60129607-60129626 None:intergenic 75.0%
CGCGTGGCGCCTCAGCAGGT+TGG + chr3.3:60129603-60129622 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 60124568 60130059 60124568 ID=MS.gene63319
chr3.3 mRNA 60124568 60130059 60124568 ID=MS.gene63319.t1;Parent=MS.gene63319
chr3.3 exon 60129959 60130059 60129959 ID=MS.gene63319.t1.exon1;Parent=MS.gene63319.t1
chr3.3 CDS 60129959 60130059 60129959 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60129772 60129842 60129772 ID=MS.gene63319.t1.exon2;Parent=MS.gene63319.t1
chr3.3 CDS 60129772 60129842 60129772 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60129479 60129603 60129479 ID=MS.gene63319.t1.exon3;Parent=MS.gene63319.t1
chr3.3 CDS 60129479 60129603 60129479 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60128787 60128831 60128787 ID=MS.gene63319.t1.exon4;Parent=MS.gene63319.t1
chr3.3 CDS 60128787 60128831 60128787 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60128139 60128241 60128139 ID=MS.gene63319.t1.exon5;Parent=MS.gene63319.t1
chr3.3 CDS 60128139 60128241 60128139 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60127734 60127843 60127734 ID=MS.gene63319.t1.exon6;Parent=MS.gene63319.t1
chr3.3 CDS 60127734 60127843 60127734 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60126934 60127043 60126934 ID=MS.gene63319.t1.exon7;Parent=MS.gene63319.t1
chr3.3 CDS 60126934 60127043 60126934 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60126754 60126844 60126754 ID=MS.gene63319.t1.exon8;Parent=MS.gene63319.t1
chr3.3 CDS 60126754 60126844 60126754 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60126247 60126675 60126247 ID=MS.gene63319.t1.exon9;Parent=MS.gene63319.t1
chr3.3 CDS 60126247 60126675 60126247 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60125903 60126030 60125903 ID=MS.gene63319.t1.exon10;Parent=MS.gene63319.t1
chr3.3 CDS 60125903 60126030 60125903 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60125210 60125558 60125210 ID=MS.gene63319.t1.exon11;Parent=MS.gene63319.t1
chr3.3 CDS 60125210 60125558 60125210 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
chr3.3 exon 60124568 60125068 60124568 ID=MS.gene63319.t1.exon12;Parent=MS.gene63319.t1
chr3.3 CDS 60124568 60125068 60124568 ID=cds.MS.gene63319.t1;Parent=MS.gene63319.t1
Gene Sequence

>MS.gene63319

ATGCCTTTCATCTCCAAAATCCAACGCCAATCCGATTACAATCGCTTCAGTTCCACCACTCCCATCGTTATCGACAATGGCGCTTCCTATTTCCGTATTGGGTACTCTCTCAAACCCTAATTTCACTTCAAAACGTGGTTTCTTTGAATTTTGAATATTTTCATCATGGGTTTTTGATTTTAACTTCAAAGTTTGTTCCTTTTTGGTGAATTTTTAGATGGGCTGGTGAGTCTGAACCTCGTGTTGTTTTTCGCAACATTGTTCAACGGCCGCGACATAAAGCCACAGGTATCTTTTTCTTCATCTGAATTATTGTGTCATTAATGTTGTTAAGATTGTTGTTTTTTGCTAGTTTTTGTTTGAATTGTTTTACATTAGTCTATGTTTAGCAAACATAAGGTTAATTGTTGGGATATTGAATAATTAATAGTTAATTTTTAACATTGTGTGACACAGGAGAAACTGTTACCATTGTTGGTGACCATGATCCAGCATTGTTGAAGTACTTTGATTGTACTCGCTCTGGACCACGATCAGCATTCGAAAGCAATGTTGTTTTTCAGTTTGAAATAATGGAATATGTAAGTTTTCCTGTTACAATTATGTGAGTATAGGAGGAATAATTTTTTTTTTAGCCTTTTCATCGATGTAGTGACCTATTTTGATGGCTGCATGTCAGAATTGGAAATTGTAGTTGTGGGAAAAAAGATGGTAGTGCTTCCTGTTTTGTTGCCATAGATAGGTTTGAACTTATGAGATGCCTGTGTTGTTCAGTTGTTGATCTAACCAAAACGAACGCCACAAGCAATATGAATAGTTTCTAACTAGGGAAATAGGTTTTCAAGTTTAAGAGTACAAACTTTGCTATGAGTCATGTACTTAGGATTTACATATTCCTAAAACTAACACACAAAAATGGTGCAGTGCATCTGTCTGTGTTAAAGTTCCTTTTTGTAATATGAACAAGTAAATGGATGCATTGTTCTCCTTGTATGACATATATGAATGAATTGAAGTGAGACAATAAGGTTTGGTAGGACACACTTTAAAGGTTGCAGATGGAATGTAACCATATGCTCATAAGTTCATAACAACTAGTTAGGGAGGTGTACCATATTACATATTATGGGAATATGGTCATTAATGTGTTGGGTTTTAAGGTGTATAATTCATTAATTTTTTAAATCATATCAAGTAACACATTACTAACATGTTGTTTCATCTTCAGATTCTGGACTTTGCTTTTGATCGAATGGGTGCAACAGGATCAGGGGTATGGCCATGAGTAAAGTGTTTTTTTATGTCTTCACAGAGCATTTAGTCTATTATCTTTGCTATTTAGACATGTCAGTAATATTAAACTCCAATGGTAGGTCCTGTTTGGATGAACACCATAATTTGCAGCTTATATCATAAGCATTTATCATGATAAGCGCTTATGTATAAGCTATTTCTATAAAAAGATAAAATAAAGTTAAGTTGTTTTTTTATAATCTGTAAGATGTTTTCATAAGCTATCTTGGAGAGCGGATGAACATAAGCTGAAAACAGCTTATGAAGTTATGAACATGTCATAAGTTGTTTTCATAAGTTCTCACAAACAAACTCACAAGTGCTTATGTCAGTAGATAGCTCAAATAAGTCCATCCAAACAGGCCCCAACTTTGGTGTGCTGCTAAACTTGGTGGATCGTGTGGTGTTGTTACCTTGGACTTGGAGTTCCTTGGTTTTGTAAATACATGTTTTCATTTTTTCACTTCTAGCGTTTAAATTATTTTGACTCACTCTTTGATATTTCTATGTTTAATGCCAGAGCAGATTGATCATCCTATCCTGATCACAGAATGTGTATGCAACCCAGTTCAATCTCGAAGTAAAATGGCAGAACTTCTTTTTGAGACTTATGGAGTTCCATCTATAGGTACTAATACTTTTTAACCCTACAATGGCAAAAGCCTTGATCTTTTACAAGAGCCTTAGTAGTAGAAACAGAAGCGTTGCATTGCCTGTTGCCTTATGCCCAATCTTCACCACCAGGTCTATTCGTAAATGAAAACATAAATCTATGCAAAGCTCTAGCAGACCATGTTTGACATCTTGTGACATAGTTATTACTGGTTTGGACACATTGCATATGCATGTTGATATCTGTTTAAGTTAGGCATTGTACATGTAATTTTATGGACTAAGCTATTTGTGCTTTTCTGCCATGCCAGCCTTTGGTGTTGACGCAGCATTCAGCTATAAATATAACCAACAACGAAGTGTTTGTGATAAAGATGGTCTTGCTATGTGTCCTGGATTCGCTACAACCCATGTGATTCCGGTATGCTTTTTATGCTATTTGCTTTATTAAGGATTTTATGGTAAAGACGAGATGGGATAGGATTAGAAATGACGATATTTTAGAGAGAGAGAGAGAGAGAGTTGGGATAGCACCTATAGTTGAAAAGATGGTGGGAAATAAGCTTAGGTGGTTTGGACATGTCGAGAGAAGACCTATAGATTCTGTAATAAGGAGAGTAGATCAGATGGAGGATAGTCAGCTCACTAGACATAGAAAAACTATCAGAGTAACTATTAGGAAAGAGTTGGAAATTAATGAGTTGGACCGAAATATGGCTTATGATAGAACATTATGGTGTAATTTGATCCATGTAGCCGACCCCACTTAGTGGGAAAAGGTTTGGTTGTTGTTGTTGTTGCTTTATTTAAGGATTTTATATGTGAAGAAAATAAGTTTTCAATGTCTTATTGAAGATCATTATGACTGTGTCCTCACAGACAAACATTGTTAAAAAAACTGTAGGGGAAAAAAATAAGTATAAAAAACTAAAATAAAAAATGGTATATTTTGTTTTATAAATTTTTAAATAAATAGGATGAATCATTTTCAATGGTCAGTTCTGCTGTTTTGCAGAGTTGCTTGTAGGAATTAGATGTCCTGCCAAATGTGTAAAGTGTTAATAATTATTTATAATTTCTAATATTCTTCATTTATTTTTTATATTTTCAGTTTGTTGACGGGGAACCAATTTATAAAGGAAGCTGTCGCACTAATATTGGTGGATTTCATGTGACTGATTATTTTCAGCGACTTCTTTCACTTAAATATCCTTATCATATGTGAGTGTGAAATCATCCTGCTTTTGCTATTACCAAGCTAACCCCTAAATACGTACTATTTCTTACGTCTTATTAAATTCTCAATACAGGGCTAGATTTACATGGGAAAAGGTTGAAGACCTGAAGATGGAACATTGTTATGTTGCACAGGACTATGTTTCAGAAGCTCGATTGTTTCTGGTAAGAAATAGGTTCTTCTTCCCCGTCTAAGTTTTTCTACTGTTCCTAAGACTTATACGCCATTTAATGGTCTGGCAGAAAGGAGCTAAGGAGGCCGAAGAAAAAACCAAAATGTGGCAGCTCCATTGGGTGCCACCTCCAGTTGAGGAGCCTCCTTCTGAGGAAGAGATTGCGAGAAAGGCAGCAATAAGGGAGAAACAAGGTCAAAGGTTGCGAGAAATGGCTGAGGCGAAGAGGTCATCAAAAATAAATGAGCTGGAAAATGAATTACGTGGTTTGGAATTTCTTTTGAATCAACTTGGACATGTTCAAGAGAGTGATGTACGATCCTTCTTAGCAGAGACCGGCTATGTCTCTAGGCAGGAAGTAGAATCTGCCCGTAGTAAAGTTGTGCAGTCCTTGCGGAAACAAAAAGGTGAGCAAACTGAAATTGAAAAACCTGACGCTGCGTCTAATGAGAAGTATACGCTTATAAACATCCCGGATGACATGCTGACGGCAGAGCAGGTGATTTTTTCTTTTTACAATTGTTTTTCTGTCACGTGCATTGTGAAATTGAACTCCCTGTCATCACACCCTTCAAATATGCTTGTAGCTTCTTTTTTTTTTTTTTGCTTGGATCCATTTGTGCTTATAGTCTTAATATCCAAATAATTTCTTAGAATATTGTTTACTGTGGCTTGCAAAGTTGACAATGTTTGTTGGGTTTTGCTTTTTTGATAGCTTGTTGAAAAGAGGAAACAGCTGTCAATTAAATCTATGTCCGATGGGAGGCAGCGATTAAAACAGAAGCGCTATGAAGAGGAATTGGAAAGGGAAAGGAAACAACAGCTAGAAGAGGAGAGACGCCTGTATGTTCCATGCTTCAATTTATTCAAGCTTGATTAAAATTACTCTGTTTCATATTCATGCGAGCAAGAGATGGTATTCAGCTTAGTGAAATGGGAAAATTTAAATATGTGTGTGTGTGAGTGAGTGAGAGAGAGAGAGAGAGAGAGCAATCATCTGTCTAGTTTAAGCTTACTAAGTTCCTTAATGGGGGAGAGAAAACTGGCTAAATCTTTAGGACAAGGCTTTTGTACAAAGCATGCACGACTTCAATCTTGACAAGGCTTGAATACTTCTAAATAATTAGTAGTGATTTTTTATGCTTTAAAATGTTTCTGATTGGTTTCTTTGGACATTCTTAACATAGGGAGAACCCAGAGCTTTACTTGGAACAATTGCGTGCCAAATACAAGGACCTTTCGGAGAAAATTGACCAACGTAAACGACTCAAAACAAATGGAGGCTCCTCCACGAATGGAAATGGAAATAGTTTGACAGGTAGTGTTGGTCGTGGTGAGAGACTCAGTGCTGCTCAAAGGGAGAGAATGCGCCTCCTGACAACTGCTGCCTTTGATCGTGGTAAGGGCGAGGATACATTTGGTGCCAAAGATGAAGATTGGCAACTTTACAAATTGATGAGCAAAGATAATGATGACGATGACGATGAACCAGATGAGGATAACACAGAGCTTGCCCGCATCTCTTCAAGGCTCCAGGTTAGGTCGAGTCTTTTATAATGTGGAACCTAACCTAAAATTAGCCGTGTTGTGTGTATGTGTTGGTATGGTTATTGTAGATTTCCTTGTATCAAAGAACTCTCATGACTAAAAAATCCTGTTGATATGTTGGTTTGGTAGGACTTGGATCCAACATTTGTGCCCAAGGTAGAAAGTAGCTCCCAACCTGCTGAGGCGCCACGCGTTCGTCCGCTCACCAAAGAAGATTTTCAGATTGTTTTCGGAGTTGAAAGGTTTAGGTGCCCTGAAATTTTGTTCAGTCCAAACTGGATTGGAGTTGATCAGGTGGGGTTAGATGAGATGGCCGGGGTCTCAATGAGAAGGTTATCATGTAAGGATGAAAAGCTGGAACAGAGAATGACTAATTCCATACTTGTGACTGGTGGAAGCTCTCTTTTCCCTGGCATCATTGAACGCCTGGAAGCTGGAATTCGGATGATTAGACCCTGCGGTTCGCCTATAAAAATAGTTAGAGCACTTGATCCGGTTATGGATGCATGGCGTGGTGCGTCTGCTTATGCATCAGCCCCTGGTTTCCACACACAAACATTCACTAGGATGGATTATTATGAAAAAGGTGAAGATTGGCTTCGTAATTATCAACTGAAATATTCATTGTAA
Protein sequence

>MS.gene63319.t1

MPFISKIQRQSDYNRFSSTTPIVIDNGASYFRIGWAGESEPRVVFRNIVQRPRHKATGETVTIVGDHDPALLKYFDCTRSGPRSAFESNVVFQFEIMEYILDFAFDRMGATGSGIDHPILITECVCNPVQSRSKMAELLFETYGVPSIAFGVDAAFSYKYNQQRSVCDKDGLAMCPGFATTHVIPFVDGEPIYKGSCRTNIGGFHVTDYFQRLLSLKYPYHMARFTWEKVEDLKMEHCYVAQDYVSEARLFLKGAKEAEEKTKMWQLHWVPPPVEEPPSEEEIARKAAIREKQGQRLREMAEAKRSSKINELENELRGLEFLLNQLGHVQESDVRSFLAETGYVSRQEVESARSKVVQSLRKQKGEQTEIEKPDAASNEKYTLINIPDDMLTAEQLVEKRKQLSIKSMSDGRQRLKQKRYEEELERERKQQLEEERRLENPELYLEQLRAKYKDLSEKIDQRKRLKTNGGSSTNGNGNSLTGSVGRGERLSAAQRERMRLLTTAAFDRGKGEDTFGAKDEDWQLYKLMSKDNDDDDDEPDEDNTELARISSRLQDLDPTFVPKVESSSQPAEAPRVRPLTKEDFQIVFGVERFRCPEILFSPNWIGVDQVGLDEMAGVSMRRLSCKDEKLEQRMTNSILVTGGSSLFPGIIERLEAGIRMIRPCGSPIKIVRALDPVMDAWRGASAYASAPGFHTQTFTRMDYYEKGEDWLRNYQLKYSL