Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64274.t1 | AFK44120.1 | 95.8 | 216 | 9 | 0 | 37 | 252 | 32 | 247 | 3.00E-90 | 341.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64274.t1 | Q9LIQ6 | 71.3 | 216 | 49 | 2 | 37 | 252 | 32 | 234 | 8.3e-65 | 248.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64274.t1 | B7FI89 | 97.2 | 216 | 6 | 0 | 37 | 252 | 32 | 247 | 2.2e-90 | 341.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050750 | MS.gene64274 | 0.804298 | 2.31E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene64274 | -0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene050953 | MS.gene64274 | 0.81693 | 4.29E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene64274 | 0.803775 | 2.97E-49 | -1.69E-46 |
| MS.gene052586 | MS.gene64274 | 0.807254 | 5.53E-50 | -1.69E-46 |
| MS.gene053006 | MS.gene64274 | 0.83851 | 2.76E-57 | -1.69E-46 |
| MS.gene053963 | MS.gene64274 | 0.830194 | 3.37E-55 | -1.69E-46 |
| MS.gene054405 | MS.gene64274 | 0.809361 | 1.97E-50 | -1.69E-46 |
| MS.gene054479 | MS.gene64274 | 0.823641 | 1.24E-53 | -1.69E-46 |
| MS.gene055701 | MS.gene64274 | 0.803913 | 2.78E-49 | -1.69E-46 |
| MS.gene058146 | MS.gene64274 | 0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene64274 | 0.800597 | 1.34E-48 | -1.69E-46 |
| MS.gene060683 | MS.gene64274 | 0.805675 | 1.19E-49 | -1.69E-46 |
| MS.gene060685 | MS.gene64274 | 0.808686 | 2.74E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64274.t1 | MTR_1g046460 | 97.222 | 216 | 6 | 0 | 37 | 252 | 32 | 247 | 2.34e-159 | 442 |
| MS.gene64274.t1 | MTR_7g085450 | 35.326 | 184 | 107 | 4 | 67 | 242 | 77 | 256 | 4.59e-31 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64274.t1 | AT3G24010 | 66.667 | 216 | 59 | 4 | 37 | 252 | 32 | 234 | 1.71e-90 | 267 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 9 | 174 | 1.49e-31 | 115 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 70 | 235 | 5.15e-31 | 115 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 70 | 235 | 5.15e-31 | 115 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 70 | 235 | 5.15e-31 | 115 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 90 | 255 | 6.66e-31 | 115 |
| MS.gene64274.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 81 | 242 | 90 | 255 | 6.66e-31 | 115 |
Find 57 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATAGAGTGGTTTCATTT+TGG | 0.253291 | 1.3:-28149829 | MS.gene64274:CDS |
| TACTTCTTATGAAGAATATT+AGG | 0.324596 | 1.3:+28153998 | None:intergenic |
| AAGCAGTATGTGGGTTCATT+TGG | 0.325444 | 1.3:+28149995 | None:intergenic |
| CCTGATGGAAATACAAAATC+TGG | 0.330861 | 1.3:-28151872 | MS.gene64274:CDS |
| AAGAACAACCAAAAGGAAAA+TGG | 0.346656 | 1.3:-28149792 | MS.gene64274:CDS |
| CTGCCGCTGCTGTTGCAGTT+TGG | 0.346888 | 1.3:+28150089 | None:intergenic |
| CCATTTCTCCATAGCTAACT+TGG | 0.349587 | 1.3:+28149966 | None:intergenic |
| GGCTGTCCAGGCATACGATT+TGG | 0.377614 | 1.3:-28152684 | MS.gene64274:intron |
| GCCAGCCTCATTTGCCTCTC+CGG | 0.403443 | 1.3:+28149737 | None:intergenic |
| GTGGGTTCATTTGGATCAAC+GGG | 0.405667 | 1.3:+28150004 | None:intergenic |
| AGAGAAAATGCTGCAATAAC+GGG | 0.418026 | 1.3:-28151911 | MS.gene64274:CDS |
| AGCAAGAAATTGAAGATATT+AGG | 0.418785 | 1.3:-28152820 | MS.gene64274:CDS |
| CCAAGTTAGCTATGGAGAAA+TGG | 0.433955 | 1.3:-28149966 | MS.gene64274:CDS |
| CTTACATCAATGTTGTAAAG+AGG | 0.455052 | 1.3:+28154417 | None:intergenic |
| AAGAGAAAATGCTGCAATAA+CGG | 0.462989 | 1.3:-28151912 | MS.gene64274:CDS |
| GCCAGTAGGGTTTGCAGATG+TGG | 0.471309 | 1.3:+28150042 | None:intergenic |
| AAAAGTCGCCTTGGCTGTCC+AGG | 0.479796 | 1.3:-28152696 | MS.gene64274:CDS |
| TTGGTTGCAAAAGCAGTATG+TGG | 0.499256 | 1.3:+28149985 | None:intergenic |
| AATCTAATAGCTGAGGTATC+CGG | 0.503643 | 1.3:+28152770 | None:intergenic |
| TCTGGAAAGGAAGGCGGTAG+AGG | 0.505564 | 1.3:-28151854 | MS.gene64274:CDS |
| ATGAACAAAAGCATAGCATC+AGG | 0.508393 | 1.3:-28152730 | MS.gene64274:CDS |
| AAAAGTTTGATGAGGAGCTT+CGG | 0.508683 | 1.3:-28152085 | MS.gene64274:CDS |
| GCCACATCTGCAAACCCTAC+TGG | 0.508937 | 1.3:-28150043 | MS.gene64274:CDS |
| TGATTACCAAATCGTATGCC+TGG | 0.512770 | 1.3:+28152678 | None:intergenic |
| AACTGCAACAGCAGCGGCAG+TGG | 0.517916 | 1.3:-28150086 | MS.gene64274:CDS |
| ATTAGGCGAGGAGTTCGATC+TGG | 0.518526 | 1.3:-28152803 | MS.gene64274:CDS |
| CAGTTTGGACAGATGCTGCT+TGG | 0.529704 | 1.3:+28150104 | None:intergenic |
| TTTCCATCAGGACTTGAAGT+AGG | 0.540325 | 1.3:+28151884 | None:intergenic |
| ATCTGCAAACCCTACTGGCA+TGG | 0.540608 | 1.3:-28150038 | MS.gene64274:CDS |
| TGTGGGTTCATTTGGATCAA+CGG | 0.548467 | 1.3:+28150003 | None:intergenic |
| TGGAAATACAAAATCTGGAA+AGG | 0.560041 | 1.3:-28151867 | MS.gene64274:CDS |
| GCGCCTACTTCAAGTCCTGA+TGG | 0.561524 | 1.3:-28151887 | MS.gene64274:CDS |
| AATACAAAATCTGGAAAGGA+AGG | 0.564186 | 1.3:-28151863 | MS.gene64274:CDS |
| AAATCTAAATCCATGCCAGT+AGG | 0.571887 | 1.3:+28150028 | None:intergenic |
| GGAAAGGAAGGCGGTAGAGG+AGG | 0.572709 | 1.3:-28151851 | MS.gene64274:CDS |
| GGCTTGAAAGAACAACCAAA+AGG | 0.577624 | 1.3:-28149799 | MS.gene64274:CDS |
| CTGTATGACCAGATAATCAA+AGG | 0.577866 | 1.3:-28152862 | MS.gene64274:intron |
| AATCGCCGGAGAGGCAAATG+AGG | 0.587113 | 1.3:-28149742 | None:intergenic |
| AATTTCAGTGCAAAATAGAG+TGG | 0.587441 | 1.3:-28149840 | MS.gene64274:intron |
| ACGACGCGGTTCTCTACCAC+CGG | 0.601863 | 1.3:+28154443 | None:intergenic |
| TGGTTGCAAAAGCAGTATGT+GGG | 0.617588 | 1.3:+28149986 | None:intergenic |
| AATCTAAATCCATGCCAGTA+GGG | 0.619977 | 1.3:+28150029 | None:intergenic |
| ATCGTATGCCTGGACAGCCA+AGG | 0.620003 | 1.3:+28152688 | None:intergenic |
| ATCAGAGAATCTAATAGCTG+AGG | 0.624258 | 1.3:+28152763 | None:intergenic |
| GTGCCGCAACAAGAAATCGC+CGG | 0.626979 | 1.3:-28149756 | MS.gene64274:CDS |
| ACATACATCAGGGTTATCAC+AGG | 0.628537 | 1.3:+28149940 | None:intergenic |
| GAAATTGAAGATATTAGGCG+AGG | 0.633046 | 1.3:-28152815 | MS.gene64274:CDS |
| GCAACAAGAAATCGCCGGAG+AGG | 0.647160 | 1.3:-28149751 | MS.gene64274:CDS |
| TCTCCGGCGATTTCTTGTTG+CGG | 0.647908 | 1.3:+28149753 | None:intergenic |
| TGTCCAAACTGCAACAGCAG+CGG | 0.650946 | 1.3:-28150092 | MS.gene64274:CDS |
| TTGTAAAGAGGTGCACGACG+CGG | 0.664606 | 1.3:+28154429 | None:intergenic |
| ACAAAATCTGGAAAGGAAGG+CGG | 0.676560 | 1.3:-28151860 | MS.gene64274:CDS |
| ATTAGTGACATTATGCACGC+CGG | 0.677195 | 1.3:-28154462 | MS.gene64274:CDS |
| AGTGACATTATGCACGCCGG+TGG | 0.679414 | 1.3:-28154459 | MS.gene64274:CDS |
| TCACTAATAAGCATCGTGTG+TGG | 0.684415 | 1.3:+28154477 | None:intergenic |
| TTTGATGAGGAGCTTCGGCG+TGG | 0.684897 | 1.3:-28152080 | MS.gene64274:intron |
| TCGATCTGGAAACATCACAC+CGG | 0.746925 | 1.3:-28152789 | MS.gene64274:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATTGTATAAAATTAT+AGG | - | chr1.3:28150685-28150704 | MS.gene64274:intron | 10.0% |
| !! | AAATGAAAATACGATAAAAA+AGG | + | chr1.3:28149951-28149970 | None:intergenic | 15.0% |
| !! | GTATAAAATTATAGGATTAT+AGG | - | chr1.3:28150693-28150712 | MS.gene64274:intron | 15.0% |
| !! | TTATAATAAGATTTGATTCA+TGG | - | chr1.3:28150936-28150955 | MS.gene64274:intron | 15.0% |
| !!! | CAAAAATTTCGATTTTTTTA+GGG | - | chr1.3:28150115-28150134 | MS.gene64274:intron | 15.0% |
| !! | AAAGTCAATATTTGTAATGA+TGG | - | chr1.3:28150639-28150658 | MS.gene64274:intron | 20.0% |
| !! | AAATACGATAAAAAAGGAAA+AGG | + | chr1.3:28149945-28149964 | None:intergenic | 20.0% |
| !! | AAATTGAAATTGAGAAAAGA+AGG | + | chr1.3:28150079-28150098 | None:intergenic | 20.0% |
| !! | AAGTTGAATCATATTGTAAT+CGG | - | chr1.3:28152228-28152247 | MS.gene64274:intron | 20.0% |
| !! | AATAAAAATTGAAAAGTTCC+AGG | - | chr1.3:28152602-28152621 | MS.gene64274:intron | 20.0% |
| !! | AATAACATTAATCAACATGT+AGG | - | chr1.3:28152710-28152729 | MS.gene64274:CDS | 20.0% |
| !! | ATAACATTAATCAACATGTA+GGG | - | chr1.3:28152711-28152730 | MS.gene64274:CDS | 20.0% |
| !! | ATATATAACTCAAAAAGAAC+CGG | + | chr1.3:28153914-28153933 | None:intergenic | 20.0% |
| !! | ATGTAAGAAAAAAATCATCA+CGG | - | chr1.3:28149823-28149842 | MS.gene64274:CDS | 20.0% |
| !! | CTATTCTATCAATAATATTC+AGG | + | chr1.3:28153234-28153253 | None:intergenic | 20.0% |
| !! | TACTAATAGTACAATAGTAT+AGG | + | chr1.3:28149921-28149940 | None:intergenic | 20.0% |
| !! | TACTTCTTATGAAGAATATT+AGG | + | chr1.3:28150229-28150248 | None:intergenic | 20.0% |
| !! | TATACTCATGTTAATATACT+TGG | - | chr1.3:28151886-28151905 | MS.gene64274:CDS | 20.0% |
| !! | TCATCTAATTGGAATAATTT+GGG | + | chr1.3:28153654-28153673 | None:intergenic | 20.0% |
| !! | TTAAATACATGTAACAAGAT+AGG | + | chr1.3:28151573-28151592 | None:intergenic | 20.0% |
| !!! | AAAAAGTACGTAATACATTT+TGG | - | chr1.3:28152400-28152419 | MS.gene64274:intron | 20.0% |
| !!! | ATAGATATTCGAAAAGTTTT+AGG | - | chr1.3:28149854-28149873 | MS.gene64274:intron | 20.0% |
| !!! | ATGTTTCATTATTTTATTGC+AGG | - | chr1.3:28152080-28152099 | MS.gene64274:intron | 20.0% |
| !!! | ATTTAGTCATTTAGTGATTT+TGG | - | chr1.3:28150741-28150760 | MS.gene64274:intron | 20.0% |
| !!! | CCAAAAATTTCGATTTTTTT+AGG | - | chr1.3:28150114-28150133 | MS.gene64274:intron | 20.0% |
| !!! | CCTAAAAAAATCGAAATTTT+TGG | + | chr1.3:28150117-28150136 | None:intergenic | 20.0% |
| !!! | TACTTTGCTATATTAAATGA+AGG | - | chr1.3:28151226-28151245 | MS.gene64274:intron | 20.0% |
| !!! | TAGATATTCGAAAAGTTTTA+GGG | - | chr1.3:28149855-28149874 | MS.gene64274:intron | 20.0% |
| !!! | TATTTTCTTATACGAACTAA+AGG | + | chr1.3:28150523-28150542 | None:intergenic | 20.0% |
| ! | AACAAGATTAACTAGACATT+AGG | - | chr1.3:28152576-28152595 | MS.gene64274:intron | 25.0% |
| ! | AAGCATGACATATAAAACAA+TGG | + | chr1.3:28150402-28150421 | None:intergenic | 25.0% |
| ! | AATAACCAAAATAATCCTCT+AGG | - | chr1.3:28153334-28153353 | MS.gene64274:intron | 25.0% |
| ! | ACAGATTTGTGACAAAAAAT+TGG | + | chr1.3:28151917-28151936 | None:intergenic | 25.0% |
| ! | AGAAATCAACTATAATGCTA+TGG | - | chr1.3:28152809-28152828 | MS.gene64274:CDS | 25.0% |
| ! | AGCAAGAAATTGAAGATATT+AGG | - | chr1.3:28151404-28151423 | MS.gene64274:intron | 25.0% |
| ! | ATAAGATTTGATTCATGGTT+TGG | - | chr1.3:28150941-28150960 | MS.gene64274:intron | 25.0% |
| ! | ATATCTGAAAAAGTTTGATG+AGG | - | chr1.3:28152131-28152150 | MS.gene64274:intron | 25.0% |
| ! | ATTACATATCCTCATCTAAT+TGG | + | chr1.3:28153665-28153684 | None:intergenic | 25.0% |
| ! | ATTTACGTCACATAATAAAC+TGG | - | chr1.3:28151073-28151092 | MS.gene64274:intron | 25.0% |
| ! | CAAATTATTCCAATTAGATG+AGG | - | chr1.3:28153653-28153672 | MS.gene64274:intron | 25.0% |
| ! | CACATAACATTATTGACATA+TGG | + | chr1.3:28153014-28153033 | None:intergenic | 25.0% |
| ! | CTCATCTAATTGGAATAATT+TGG | + | chr1.3:28153655-28153674 | None:intergenic | 25.0% |
| ! | GTACATATTTCAGATTGTTA+TGG | + | chr1.3:28152784-28152803 | None:intergenic | 25.0% |
| ! | TAACATTAATCAACATGTAG+GGG | - | chr1.3:28152712-28152731 | MS.gene64274:CDS | 25.0% |
| ! | TAAGAAACTTATGTATTCTG+TGG | + | chr1.3:28153402-28153421 | None:intergenic | 25.0% |
| ! | TAATAGTACAATAGTATAGG+TGG | + | chr1.3:28149918-28149937 | None:intergenic | 25.0% |
| ! | TACTAAATAGTACTATTGTG+TGG | - | chr1.3:28151808-28151827 | MS.gene64274:intron | 25.0% |
| ! | TATAGGTTCATCGTAATAAT+AGG | - | chr1.3:28150710-28150729 | MS.gene64274:intron | 25.0% |
| ! | TATATAACTCAAAAAGAACC+GGG | + | chr1.3:28153913-28153932 | None:intergenic | 25.0% |
| ! | TCAAAATATGTATGGAATGT+AGG | + | chr1.3:28154353-28154372 | None:intergenic | 25.0% |
| ! | TCACATTATAAATACAAGTG+AGG | - | chr1.3:28151978-28151997 | MS.gene64274:intron | 25.0% |
| ! | TTCAAACTAATGAATTACGA+TGG | - | chr1.3:28149891-28149910 | MS.gene64274:intron | 25.0% |
| ! | TTGTTACATGTATTTAACCA+AGG | - | chr1.3:28151576-28151595 | MS.gene64274:intron | 25.0% |
| ! | TTTGGTATTTAAGAGACTAA+TGG | - | chr1.3:28153196-28153215 | MS.gene64274:intron | 25.0% |
| !! | AAAATAGAGTGGTTTCATTT+TGG | - | chr1.3:28154395-28154414 | MS.gene64274:intron | 25.0% |
| !! | AACAATCTGAAATATGTACA+AGG | - | chr1.3:28152785-28152804 | MS.gene64274:CDS | 25.0% |
| !! | CAATATTTGTAATGATGGAA+CGG | - | chr1.3:28150644-28150663 | MS.gene64274:intron | 25.0% |
| !! | CAATGATTTTCATTACACTA+AGG | - | chr1.3:28151667-28151686 | MS.gene64274:intron | 25.0% |
| !! | GTGAAATGAACTTTAATTTC+AGG | - | chr1.3:28151185-28151204 | MS.gene64274:intron | 25.0% |
| !! | TAATTCCTAGAGGATTATTT+TGG | + | chr1.3:28153342-28153361 | None:intergenic | 25.0% |
| !! | TACCTTGTAAACTTTTATCT+AGG | + | chr1.3:28150267-28150286 | None:intergenic | 25.0% |
| !!! | ATCAAAACATGTCATTTTTG+TGG | - | chr1.3:28150596-28150615 | MS.gene64274:intron | 25.0% |
| !!! | CAAAAATGACATGTTTTGAT+TGG | + | chr1.3:28150596-28150615 | None:intergenic | 25.0% |
| !!! | CATGTATTTTTTTACACTGT+CGG | - | chr1.3:28150348-28150367 | MS.gene64274:intron | 25.0% |
| !!! | TCTGTATTTCTAGATAGAAA+AGG | - | chr1.3:28152632-28152651 | MS.gene64274:intron | 25.0% |
| !!! | TTTTTTTCTTTCTGCAGATT+TGG | - | chr1.3:28150195-28150214 | MS.gene64274:intron | 25.0% |
| AAGAACAACCAAAAGGAAAA+TGG | - | chr1.3:28154432-28154451 | MS.gene64274:CDS | 30.0% | |
| AAGAGAAAATGCTGCAATAA+CGG | - | chr1.3:28152312-28152331 | MS.gene64274:intron | 30.0% | |
| AAGGAATGGGGAATAATTTA+AGG | + | chr1.3:28152966-28152985 | None:intergenic | 30.0% | |
| AATAACATTCGCAAATTGAG+TGG | + | chr1.3:28152193-28152212 | None:intergenic | 30.0% | |
| AATACAAAATCTGGAAAGGA+AGG | - | chr1.3:28152361-28152380 | MS.gene64274:intron | 30.0% | |
| AATGGGGAATAATTTAAGGA+TGG | + | chr1.3:28152962-28152981 | None:intergenic | 30.0% | |
| AATTTCAGTGCAAAATAGAG+TGG | - | chr1.3:28154384-28154403 | MS.gene64274:intron | 30.0% | |
| ACCATTATTTGTATCCTTTG+GGG | - | chr1.3:28153863-28153882 | MS.gene64274:intron | 30.0% | |
| ACTCAAGATGTGATAAACTA+GGG | + | chr1.3:28151307-28151326 | None:intergenic | 30.0% | |
| AGAAATACAGAAAGAATTCC+TGG | + | chr1.3:28152623-28152642 | None:intergenic | 30.0% | |
| AGATACAAATAGCAGATTTG+TGG | + | chr1.3:28151626-28151645 | None:intergenic | 30.0% | |
| AGATAGCGTCAAAATATGTA+TGG | + | chr1.3:28154361-28154380 | None:intergenic | 30.0% | |
| ATATAACTCAAAAAGAACCG+GGG | + | chr1.3:28153912-28153931 | None:intergenic | 30.0% | |
| ATCATTGATCAGATTATCCT+TGG | + | chr1.3:28151596-28151615 | None:intergenic | 30.0% | |
| ATTCTATATGAAGCCGAATA+AGG | + | chr1.3:28150859-28150878 | None:intergenic | 30.0% | |
| ATTCTTCAAGGAATGACATT+AGG | + | chr1.3:28150039-28150058 | None:intergenic | 30.0% | |
| CATGACATATAAAACAATGG+TGG | + | chr1.3:28150399-28150418 | None:intergenic | 30.0% | |
| CTTACATCAATGTTGTAAAG+AGG | + | chr1.3:28149810-28149829 | None:intergenic | 30.0% | |
| GAAAGTAGAAACATACATCA+GGG | + | chr1.3:28154297-28154316 | None:intergenic | 30.0% | |
| GAAATTACAATTGCTGCAAT+AGG | - | chr1.3:28153297-28153316 | MS.gene64274:intron | 30.0% | |
| GAAGAAAGAATTAAGGAATG+GGG | + | chr1.3:28152978-28152997 | None:intergenic | 30.0% | |
| GACCATTATTTGTATCCTTT+GGG | - | chr1.3:28153862-28153881 | MS.gene64274:intron | 30.0% | |
| GACCTAGATAAAAGTTTACA+AGG | - | chr1.3:28150262-28150281 | MS.gene64274:intron | 30.0% | |
| GAGAAATTAGGAACTATATC+AGG | + | chr1.3:28152287-28152306 | None:intergenic | 30.0% | |
| GGAAGAAAGAATTAAGGAAT+GGG | + | chr1.3:28152979-28152998 | None:intergenic | 30.0% | |
| TACTCTGTTACGTTAAGATA+TGG | - | chr1.3:28152505-28152524 | MS.gene64274:intron | 30.0% | |
| TATGTTCATCAACCAAATTC+AGG | + | chr1.3:28151837-28151856 | None:intergenic | 30.0% | |
| TCAACTATAATGCTATGGAA+TGG | - | chr1.3:28152814-28152833 | MS.gene64274:CDS | 30.0% | |
| TGAAAGTAGAAACATACATC+AGG | + | chr1.3:28154298-28154317 | None:intergenic | 30.0% | |
| TGGAAATACAAAATCTGGAA+AGG | - | chr1.3:28152357-28152376 | MS.gene64274:intron | 30.0% | |
| TGGAAGAAAGAATTAAGGAA+TGG | + | chr1.3:28152980-28152999 | None:intergenic | 30.0% | |
| TGTATGGAATGTAGGTAAAA+TGG | + | chr1.3:28154345-28154364 | None:intergenic | 30.0% | |
| TTATGAGTTTGTGCATACTA+AGG | + | chr1.3:28151046-28151065 | None:intergenic | 30.0% | |
| TTCATGTTATGCTTGATCTT+TGG | - | chr1.3:28153178-28153197 | MS.gene64274:intron | 30.0% | |
| TTCTCTTTCTGTGAGAAATT+AGG | + | chr1.3:28152299-28152318 | None:intergenic | 30.0% | |
| TTCTTCAAGGAATGACATTA+GGG | + | chr1.3:28150038-28150057 | None:intergenic | 30.0% | |
| TTGAAATTCACTCTAAACAG+AGG | - | chr1.3:28152751-28152770 | MS.gene64274:CDS | 30.0% | |
| TTGAAATTGAGAAAAGAAGG+TGG | + | chr1.3:28150076-28150095 | None:intergenic | 30.0% | |
| ! | AACCTCACTTTAAAAGCTAT+AGG | + | chr1.3:28153975-28153994 | None:intergenic | 30.0% |
| ! | ATACGAACTAAAGGTATACA+CGG | + | chr1.3:28150514-28150533 | None:intergenic | 30.0% |
| ! | CACTTCTTTCGTAACATTTT+CGG | + | chr1.3:28152690-28152709 | None:intergenic | 30.0% |
| ! | TCATTTTGCCTTTGATTATC+TGG | + | chr1.3:28151373-28151392 | None:intergenic | 30.0% |
| ! | TGTCTGTGTAAAACTGTTTT+CGG | - | chr1.3:28150484-28150503 | MS.gene64274:intron | 30.0% |
| ! | TTATACTGTCTTTTGTGCTT+AGG | - | chr1.3:28150878-28150897 | MS.gene64274:intron | 30.0% |
| !! | CGGTTTAAAACAGTTTTACA+CGG | - | chr1.3:28150368-28150387 | MS.gene64274:intron | 30.0% |
| !! | GGTTTAAAACAGTTTTACAC+GGG | - | chr1.3:28150369-28150388 | MS.gene64274:intron | 30.0% |
| !! | GTTTTATGTTGGATTAGGTT+GGG | + | chr1.3:28153380-28153399 | None:intergenic | 30.0% |
| !!! | ATCCTATAGCTTTTAAAGTG+AGG | - | chr1.3:28153970-28153989 | MS.gene64274:intron | 30.0% |
| !!! | CTTGCTTTTTTTCTTTCTCT+GGG | - | chr1.3:28153806-28153825 | MS.gene64274:intron | 30.0% |
| !!! | TGTATTCTGTGGTTTTATGT+TGG | + | chr1.3:28153391-28153410 | None:intergenic | 30.0% |
| !!! | TGTCATTTTTGTGGCTTTTA+AGG | - | chr1.3:28150605-28150624 | MS.gene64274:intron | 30.0% |
| !!! | TTGCTTTTTTTCTTTCTCTG+GGG | - | chr1.3:28153807-28153826 | MS.gene64274:intron | 30.0% |
| AAAAGTTTGATGAGGAGCTT+CGG | - | chr1.3:28152139-28152158 | MS.gene64274:intron | 35.0% | |
| AAAATAACCATACCAGAGTG+GGG | - | chr1.3:28150430-28150449 | MS.gene64274:intron | 35.0% | |
| AAATCTAAATCCATGCCAGT+AGG | + | chr1.3:28154199-28154218 | None:intergenic | 35.0% | |
| AACACCCAGTTAACTCAAAT+TGG | - | chr1.3:28153438-28153457 | MS.gene64274:intron | 35.0% | |
| AATACCAGAATGAGTACTTG+AGG | + | chr1.3:28153701-28153720 | None:intergenic | 35.0% | |
| AATCTAAATCCATGCCAGTA+GGG | + | chr1.3:28154198-28154217 | None:intergenic | 35.0% | |
| AATGGAAAAAGAAGCAGAGA+TGG | + | chr1.3:28153111-28153130 | None:intergenic | 35.0% | |
| ACACCCAGTTAACTCAAATT+GGG | - | chr1.3:28153439-28153458 | MS.gene64274:intron | 35.0% | |
| ACAGAGTACATATGTTGGAA+AGG | + | chr1.3:28152493-28152512 | None:intergenic | 35.0% | |
| ACGTAACAGAGTACATATGT+TGG | + | chr1.3:28152498-28152517 | None:intergenic | 35.0% | |
| AGAGAAAATGCTGCAATAAC+GGG | - | chr1.3:28152313-28152332 | MS.gene64274:intron | 35.0% | |
| AGCGTACAAACAGATTACTA+TGG | - | chr1.3:28153497-28153516 | MS.gene64274:intron | 35.0% | |
| AGGATACAAATAATGGTCCA+AGG | + | chr1.3:28153860-28153879 | None:intergenic | 35.0% | |
| ATCAGAGAATCTAATAGCTG+AGG | + | chr1.3:28151464-28151483 | None:intergenic | 35.0% | |
| ATTGTGTGGTAACCTGAATT+TGG | - | chr1.3:28151822-28151841 | MS.gene64274:intron | 35.0% | |
| CAAAATAACCATACCAGAGT+GGG | - | chr1.3:28150429-28150448 | MS.gene64274:intron | 35.0% | |
| CACATAAACGACAACATGAT+AGG | + | chr1.3:28152452-28152471 | None:intergenic | 35.0% | |
| CATTATTTGTATCCTTTGGG+GGG | - | chr1.3:28153865-28153884 | MS.gene64274:intron | 35.0% | |
| CCACAAACATGGATCATTTA+CGG | - | chr1.3:28151714-28151733 | MS.gene64274:intron | 35.0% | |
| CCAGAGAAAGAAAAAAAGCA+AGG | + | chr1.3:28153808-28153827 | None:intergenic | 35.0% | |
| CCATTATTTGTATCCTTTGG+GGG | - | chr1.3:28153864-28153883 | MS.gene64274:intron | 35.0% | |
| CCTGATGGAAATACAAAATC+TGG | - | chr1.3:28152352-28152371 | MS.gene64274:intron | 35.0% | |
| CTCAAGATGTGATAAACTAG+GGG | + | chr1.3:28151306-28151325 | None:intergenic | 35.0% | |
| CTGTATGACCAGATAATCAA+AGG | - | chr1.3:28151362-28151381 | MS.gene64274:intron | 35.0% | |
| CTTCATCAGATATCCTATCT+CGG | - | chr1.3:28153746-28153765 | MS.gene64274:intron | 35.0% | |
| GAAATTGAAGATATTAGGCG+AGG | - | chr1.3:28151409-28151428 | MS.gene64274:intron | 35.0% | |
| GACTCAAGATGTGATAAACT+AGG | + | chr1.3:28151308-28151327 | None:intergenic | 35.0% | |
| GAGACAAGAACAGAACAAAT+GGG | + | chr1.3:28153089-28153108 | None:intergenic | 35.0% | |
| GAGAGTGGAAGAAAGAATTA+AGG | + | chr1.3:28152985-28153004 | None:intergenic | 35.0% | |
| GGACCATTATTTGTATCCTT+TGG | - | chr1.3:28153861-28153880 | MS.gene64274:intron | 35.0% | |
| GGACTAACATGGTTATCAAA+TGG | + | chr1.3:28150998-28151017 | None:intergenic | 35.0% | |
| GTATTGTGCTTCTACATCAA+AGG | + | chr1.3:28151019-28151038 | None:intergenic | 35.0% | |
| GTCAAATGTCGAACAAATGT+TGG | + | chr1.3:28153597-28153616 | None:intergenic | 35.0% | |
| TAAGTTTCTTACCCTTGTTC+TGG | - | chr1.3:28153411-28153430 | MS.gene64274:intron | 35.0% | |
| TACAAAGTACGAACAGTTGT+TGG | - | chr1.3:28152035-28152054 | MS.gene64274:intron | 35.0% | |
| TACATATGTTGGAAAGGACA+AGG | + | chr1.3:28152487-28152506 | None:intergenic | 35.0% | |
| TACTCGCTTGAAATTCTTCA+AGG | + | chr1.3:28150051-28150070 | None:intergenic | 35.0% | |
| TATAACTCAAAAAGAACCGG+GGG | + | chr1.3:28153911-28153930 | None:intergenic | 35.0% | |
| TATTTCATTGTCATCCTGCA+AGG | + | chr1.3:28152849-28152868 | None:intergenic | 35.0% | |
| TCAAAATAACCATACCAGAG+TGG | - | chr1.3:28150428-28150447 | MS.gene64274:intron | 35.0% | |
| TCTACATCAAAGGACTAACA+TGG | + | chr1.3:28151009-28151028 | None:intergenic | 35.0% | |
| TCTATCATGTACAGCAAATG+TGG | + | chr1.3:28151766-28151785 | None:intergenic | 35.0% | |
| TGAAGAGTGGTAACCTTATT+CGG | - | chr1.3:28150843-28150862 | MS.gene64274:intron | 35.0% | |
| TTCATCAGATATCCTATCTC+GGG | - | chr1.3:28153747-28153766 | MS.gene64274:intron | 35.0% | |
| ! | AATCTAATAGCTGAGGTATC+CGG | + | chr1.3:28151457-28151476 | None:intergenic | 35.0% |
| ! | ATGAACAAAAGCATAGCATC+AGG | - | chr1.3:28151494-28151513 | MS.gene64274:intron | 35.0% |
| ! | CCAGATTTTGTATTTCCATC+AGG | + | chr1.3:28152355-28152374 | None:intergenic | 35.0% |
| ! | GAACAGTACCATTTTCCTTT+TGG | + | chr1.3:28154443-28154462 | None:intergenic | 35.0% |
| ! | TTTTGCAACCAAGTTAGCTA+TGG | - | chr1.3:28154250-28154269 | MS.gene64274:intron | 35.0% |
| ! | TTTTTCCATTCCTCCTAAGT+TGG | - | chr1.3:28153121-28153140 | MS.gene64274:intron | 35.0% |
| !! | AACAGTTGTTGGCTTGTTTA+TGG | - | chr1.3:28152046-28152065 | MS.gene64274:intron | 35.0% |
| !! | AAGAAGCATTAACTGATGAC+AGG | + | chr1.3:28153160-28153179 | None:intergenic | 35.0% |
| !! | GGTTTTATGTTGGATTAGGT+TGG | + | chr1.3:28153381-28153400 | None:intergenic | 35.0% |
| !! | TTGTAATGATGGAACGGTTT+TGG | - | chr1.3:28150650-28150669 | MS.gene64274:intron | 35.0% |
| !!! | AATCTTGTTTTCCACATCCT+CGG | + | chr1.3:28152565-28152584 | None:intergenic | 35.0% |
| !!! | CCTTGCTTTTTTTCTTTCTC+TGG | - | chr1.3:28153805-28153824 | MS.gene64274:intron | 35.0% |
| !!! | CTGTGGTTTTATGTTGGATT+AGG | + | chr1.3:28153385-28153404 | None:intergenic | 35.0% |
| !!! | GATTTTGGTGTCATTCTTTG+TGG | - | chr1.3:28150756-28150775 | MS.gene64274:intron | 35.0% |
| !!! | GCAAAGTAGTGGATTTTCAT+TGG | - | chr1.3:28150460-28150479 | MS.gene64274:intron | 35.0% |
| AAATGTTGGTCGTACTGTGA+TGG | + | chr1.3:28153583-28153602 | None:intergenic | 40.0% | |
| AAATTCAGGGGCTTAATGGA+AGG | + | chr1.3:28152914-28152933 | None:intergenic | 40.0% | |
| AAGCAGTATGTGGGTTCATT+TGG | + | chr1.3:28154232-28154251 | None:intergenic | 40.0% | |
| AAGTAGACACTAGTTATCCG+AGG | - | chr1.3:28152545-28152564 | MS.gene64274:intron | 40.0% | |
| AATGGAGACAAATTCCTTGC+AGG | - | chr1.3:28152832-28152851 | MS.gene64274:CDS | 40.0% | |
| AATTGTGCCTGACCTAACAT+TGG | - | chr1.3:28153473-28153492 | MS.gene64274:intron | 40.0% | |
| ACAAAATCTGGAAAGGAAGG+CGG | - | chr1.3:28152364-28152383 | MS.gene64274:intron | 40.0% | |
| ACATACATCAGGGTTATCAC+AGG | + | chr1.3:28154287-28154306 | None:intergenic | 40.0% | |
| AGATGTGATAAACTAGGGGA+AGG | + | chr1.3:28151302-28151321 | None:intergenic | 40.0% | |
| AGCAGAAGTTACAGAACAGA+GGG | - | chr1.3:28153275-28153294 | MS.gene64274:intron | 40.0% | |
| AGGAAAATTCAGGGGCTTAA+TGG | + | chr1.3:28152918-28152937 | None:intergenic | 40.0% | |
| AGGAATGACATTAGGGTTTC+TGG | + | chr1.3:28150031-28150050 | None:intergenic | 40.0% | |
| AGTAAGGAAAACAGGACAGA+GGG | + | chr1.3:28153041-28153060 | None:intergenic | 40.0% | |
| ATAACTCAAAAAGAACCGGG+GGG | + | chr1.3:28153910-28153929 | None:intergenic | 40.0% | |
| ATCATGTACAGCAAATGTGG+TGG | + | chr1.3:28151763-28151782 | None:intergenic | 40.0% | |
| ATGTGATAAACTAGGGGAAG+GGG | + | chr1.3:28151300-28151319 | None:intergenic | 40.0% | |
| ATTAATAGGGCCAACTTAGG+AGG | + | chr1.3:28153134-28153153 | None:intergenic | 40.0% | |
| ATTAGTGACATTATGCACGC+CGG | - | chr1.3:28149762-28149781 | MS.gene64274:CDS | 40.0% | |
| ATTCTTTCTTCCACTCTCCT+TGG | - | chr1.3:28152987-28153006 | MS.gene64274:intron | 40.0% | |
| CATTATTGACATATGGCCCA+AGG | + | chr1.3:28153007-28153026 | None:intergenic | 40.0% | |
| CATTCCTCAAGTACTCATTC+TGG | - | chr1.3:28153694-28153713 | MS.gene64274:intron | 40.0% | |
| CCAAGTTAGCTATGGAGAAA+TGG | - | chr1.3:28154258-28154277 | MS.gene64274:intron | 40.0% | |
| CCATTTCTCCATAGCTAACT+TGG | + | chr1.3:28154261-28154280 | None:intergenic | 40.0% | |
| CCCCCAAAGGATACAAATAA+TGG | + | chr1.3:28153867-28153886 | None:intergenic | 40.0% | |
| CCGTAAATGATCCATGTTTG+TGG | + | chr1.3:28151717-28151736 | None:intergenic | 40.0% | |
| CTGTGATGGCATTGTCAATT+CGG | + | chr1.3:28153569-28153588 | None:intergenic | 40.0% | |
| GAATGACATTAGGGTTTCTG+GGG | + | chr1.3:28150029-28150048 | None:intergenic | 40.0% | |
| GATGTGATAAACTAGGGGAA+GGG | + | chr1.3:28151301-28151320 | None:intergenic | 40.0% | |
| GGAAAAAAAACACCAGACTC+AGG | + | chr1.3:28153787-28153806 | None:intergenic | 40.0% | |
| GGAATGACATTAGGGTTTCT+GGG | + | chr1.3:28150030-28150049 | None:intergenic | 40.0% | |
| GGAGACAAGAACAGAACAAA+TGG | + | chr1.3:28153090-28153109 | None:intergenic | 40.0% | |
| GGCATTTCAATATGCCAGAT+TGG | - | chr1.3:28152653-28152672 | MS.gene64274:intron | 40.0% | |
| GGCTTGAAAGAACAACCAAA+AGG | - | chr1.3:28154425-28154444 | MS.gene64274:CDS | 40.0% | |
| GTTTGTACGCTTCCAATGTT+AGG | + | chr1.3:28153488-28153507 | None:intergenic | 40.0% | |
| TAGCAGAAGTTACAGAACAG+AGG | - | chr1.3:28153274-28153293 | MS.gene64274:intron | 40.0% | |
| TCAGGCACAATTGATTGACA+GGG | + | chr1.3:28153465-28153484 | None:intergenic | 40.0% | |
| TCATCAGATATCCTATCTCG+GGG | - | chr1.3:28153748-28153767 | MS.gene64274:intron | 40.0% | |
| TGATGACAGGCCCATTAATA+GGG | + | chr1.3:28153147-28153166 | None:intergenic | 40.0% | |
| TGATTACCAAATCGTATGCC+TGG | + | chr1.3:28151549-28151568 | None:intergenic | 40.0% | |
| TGGTTGCAAAAGCAGTATGT+GGG | + | chr1.3:28154241-28154260 | None:intergenic | 40.0% | |
| TGTGGGTTCATTTGGATCAA+CGG | + | chr1.3:28154224-28154243 | None:intergenic | 40.0% | |
| TGTGTAACTGTGTGAATCAG+TGG | - | chr1.3:28150820-28150839 | MS.gene64274:intron | 40.0% | |
| TTCTTTCTTCCACTCTCCTT+GGG | - | chr1.3:28152988-28153007 | MS.gene64274:intron | 40.0% | |
| TTGCTGTACATGATAGAAGC+TGG | - | chr1.3:28151769-28151788 | MS.gene64274:intron | 40.0% | |
| TTGGTTGCAAAAGCAGTATG+TGG | + | chr1.3:28154242-28154261 | None:intergenic | 40.0% | |
| TTTCCATCAGGACTTGAAGT+AGG | + | chr1.3:28152343-28152362 | None:intergenic | 40.0% | |
| ! | CCTAAGTTGGCCCTATTAAT+GGG | - | chr1.3:28153134-28153153 | MS.gene64274:intron | 40.0% |
| ! | TCACTAATAAGCATCGTGTG+TGG | + | chr1.3:28149750-28149769 | None:intergenic | 40.0% |
| ! | TCCTAAGTTGGCCCTATTAA+TGG | - | chr1.3:28153133-28153152 | MS.gene64274:intron | 40.0% |
| ! | TCTGTCCTGTTTTCCTTACT+CGG | - | chr1.3:28153041-28153060 | MS.gene64274:intron | 40.0% |
| !! | TAATGATGGAACGGTTTTGG+CGG | - | chr1.3:28150653-28150672 | MS.gene64274:intron | 40.0% |
| !! | TTTCTCTGGGGTGTGTTTAT+GGG | - | chr1.3:28153819-28153838 | MS.gene64274:intron | 40.0% |
| !! | TTTGGTGTCATTCTTTGTGG+TGG | - | chr1.3:28150759-28150778 | MS.gene64274:intron | 40.0% |
| !!! | CATGTTTTGATTGGCAGACA+CGG | + | chr1.3:28150587-28150606 | None:intergenic | 40.0% |
| !!! | GGGTGTTTTAACCAGAACAA+GGG | + | chr1.3:28153425-28153444 | None:intergenic | 40.0% |
| !!! | TGGGTGTTTTAACCAGAACA+AGG | + | chr1.3:28153426-28153445 | None:intergenic | 40.0% |
| !!! | TGGTTTCATTTTGGCTGTGT+TGG | - | chr1.3:28154404-28154423 | MS.gene64274:intron | 40.0% |
| ACACTAGTTATCCGAGGATG+TGG | - | chr1.3:28152551-28152570 | MS.gene64274:intron | 45.0% | |
| ACGAACTAGCACCACAAACA+TGG | - | chr1.3:28151703-28151722 | MS.gene64274:intron | 45.0% | |
| CATCAGATATCCTATCTCGG+GGG | - | chr1.3:28153749-28153768 | MS.gene64274:intron | 45.0% | |
| CCCATTAATAGGGCCAACTT+AGG | + | chr1.3:28153137-28153156 | None:intergenic | 45.0% | |
| CTAGGCTCTCTAATTCCTAG+AGG | + | chr1.3:28153352-28153371 | None:intergenic | 45.0% | |
| CTGATGACAGGCCCATTAAT+AGG | + | chr1.3:28153148-28153167 | None:intergenic | 45.0% | |
| CTTCTGCTAGTAGTTACTGC+AGG | + | chr1.3:28153263-28153282 | None:intergenic | 45.0% | |
| GAACGATGCGTTTCGTTTGA+AGG | + | chr1.3:28150004-28150023 | None:intergenic | 45.0% | |
| GAGTAAGGAAAACAGGACAG+AGG | + | chr1.3:28153042-28153061 | None:intergenic | 45.0% | |
| GTCAGGCACAATTGATTGAC+AGG | + | chr1.3:28153466-28153485 | None:intergenic | 45.0% | |
| GTGGGTTCATTTGGATCAAC+GGG | + | chr1.3:28154223-28154242 | None:intergenic | 45.0% | |
| TAACTCAAAAAGAACCGGGG+GGG | + | chr1.3:28153909-28153928 | None:intergenic | 45.0% | |
| TACGCTTCCAATGTTAGGTC+AGG | + | chr1.3:28153483-28153502 | None:intergenic | 45.0% | |
| TCGATCTGGAAACATCACAC+CGG | - | chr1.3:28151435-28151454 | MS.gene64274:intron | 45.0% | |
| TGAGAAACCACACGAAGCTT+TGG | + | chr1.3:28150912-28150931 | None:intergenic | 45.0% | |
| TGCTGATGAAAAAGTCGCCT+TGG | - | chr1.3:28151519-28151538 | MS.gene64274:intron | 45.0% | |
| TGTGAATCAGTGGTGAAGAG+TGG | - | chr1.3:28150830-28150849 | MS.gene64274:intron | 45.0% | |
| TGTGATAAACTAGGGGAAGG+GGG | + | chr1.3:28151299-28151318 | None:intergenic | 45.0% | |
| ! | AGGGCCCAATTTGAGTTAAC+TGG | + | chr1.3:28153446-28153465 | None:intergenic | 45.0% |
| ! | AGGGGTGTGAGGAAAATTCA+GGG | + | chr1.3:28152927-28152946 | None:intergenic | 45.0% |
| ! | GGGCCCAATTTGAGTTAACT+GGG | + | chr1.3:28153445-28153464 | None:intergenic | 45.0% |
| ! | TGCGTTTCGTTTGAAGGTGT+TGG | + | chr1.3:28149998-28150017 | None:intergenic | 45.0% |
| !! | AGGCTTTGTTCAGACAGATG+AGG | + | chr1.3:28152267-28152286 | None:intergenic | 45.0% |
| !! | CTTTCTCTGGGGTGTGTTTA+TGG | - | chr1.3:28153818-28153837 | MS.gene64274:intron | 45.0% |
| !! | GGCTTTGTTCAGACAGATGA+GGG | + | chr1.3:28152266-28152285 | None:intergenic | 45.0% |
| AACTCAAAAAGAACCGGGGG+GGG | + | chr1.3:28153908-28153927 | None:intergenic | 50.0% | |
| ATCTGCAAACCCTACTGGCA+TGG | - | chr1.3:28154186-28154205 | MS.gene64274:intron | 50.0% | |
| ATTAGGCGAGGAGTTCGATC+TGG | - | chr1.3:28151421-28151440 | MS.gene64274:intron | 50.0% | |
| CAGGGGCTTAATGGAAGGTT+GGG | + | chr1.3:28152909-28152928 | None:intergenic | 50.0% | |
| CAGTTTGGACAGATGCTGCT+TGG | + | chr1.3:28154123-28154142 | None:intergenic | 50.0% | |
| CATACCAGAGTGGGGTGATA+TGG | - | chr1.3:28150438-28150457 | MS.gene64274:intron | 50.0% | |
| CATATCACCCCACTCTGGTA+TGG | + | chr1.3:28150440-28150459 | None:intergenic | 50.0% | |
| CGGAGTTACATGCACCAATC+TGG | + | chr1.3:28152670-28152689 | None:intergenic | 50.0% | |
| GGGGTGATATGGCAAAGTAG+TGG | - | chr1.3:28150449-28150468 | MS.gene64274:intron | 50.0% | |
| GGGGTGTGAGGAAAATTCAG+GGG | + | chr1.3:28152926-28152945 | None:intergenic | 50.0% | |
| GTTTCTGCCAAAGCTTCGTG+TGG | - | chr1.3:28150902-28150921 | MS.gene64274:intron | 50.0% | |
| TAGGGCCAACTTAGGAGGAA+TGG | + | chr1.3:28153129-28153148 | None:intergenic | 50.0% | |
| TCAGGGGCTTAATGGAAGGT+TGG | + | chr1.3:28152910-28152929 | None:intergenic | 50.0% | |
| TCTCCGGCGATTTCTTGTTG+CGG | + | chr1.3:28154474-28154493 | None:intergenic | 50.0% | |
| TGTCCAAACTGCAACAGCAG+CGG | - | chr1.3:28154132-28154151 | MS.gene64274:intron | 50.0% | |
| TTTGCCATATCACCCCACTC+TGG | + | chr1.3:28150445-28150464 | None:intergenic | 50.0% | |
| ! | AATTTTCCTCACACCCCTCG+TGG | - | chr1.3:28152929-28152948 | MS.gene64274:intron | 50.0% |
| ! | GAGGGGTGTGAGGAAAATTC+AGG | + | chr1.3:28152928-28152947 | None:intergenic | 50.0% |
| ! | TTGTAAAGAGGTGCACGACG+CGG | + | chr1.3:28149798-28149817 | None:intergenic | 50.0% |
| !! | GGATTAGGTTGGGAGAGACT+AGG | + | chr1.3:28153370-28153389 | None:intergenic | 50.0% |
| AAAAGTCGCCTTGGCTGTCC+AGG | - | chr1.3:28151528-28151547 | MS.gene64274:intron | 55.0% | |
| ACTCAAAAAGAACCGGGGGG+GGG | + | chr1.3:28153907-28153926 | None:intergenic | 55.0% | |
| AGTGACATTATGCACGCCGG+TGG | - | chr1.3:28149765-28149784 | MS.gene64274:CDS | 55.0% | |
| ATCGTATGCCTGGACAGCCA+AGG | + | chr1.3:28151539-28151558 | None:intergenic | 55.0% | |
| ATGGGCCCAAGACTCACACA+AGG | + | chr1.3:28153071-28153090 | None:intergenic | 55.0% | |
| GACATATGGCCCAAGGAGAG+TGG | + | chr1.3:28153000-28153019 | None:intergenic | 55.0% | |
| GATATCCTATCTCGGGGGTC+CGG | - | chr1.3:28153754-28153773 | MS.gene64274:intron | 55.0% | |
| GCAACAAGAAATCGCCGGAG+AGG | - | chr1.3:28154473-28154492 | MS.gene64274:CDS | 55.0% | |
| GCAGCCCTTGTGTGAGTCTT+GGG | - | chr1.3:28153063-28153082 | MS.gene64274:intron | 55.0% | |
| GCCACATCTGCAAACCCTAC+TGG | - | chr1.3:28154181-28154200 | MS.gene64274:intron | 55.0% | |
| GCCAGTAGGGTTTGCAGATG+TGG | + | chr1.3:28154185-28154204 | None:intergenic | 55.0% | |
| GCGCCTACTTCAAGTCCTGA+TGG | - | chr1.3:28152337-28152356 | MS.gene64274:intron | 55.0% | |
| GGCTGCCGAGTAAGGAAAAC+AGG | + | chr1.3:28153049-28153068 | None:intergenic | 55.0% | |
| GGCTGTCCAGGCATACGATT+TGG | - | chr1.3:28151540-28151559 | MS.gene64274:intron | 55.0% | |
| GTGCCGCAACAAGAAATCGC+CGG | - | chr1.3:28154468-28154487 | MS.gene64274:CDS | 55.0% | |
| TCTGGAAAGGAAGGCGGTAG+AGG | - | chr1.3:28152370-28152389 | MS.gene64274:intron | 55.0% | |
| TGGGCCCAAGACTCACACAA+GGG | + | chr1.3:28153070-28153089 | None:intergenic | 55.0% | |
| TGGGGTGTGTTTATGGGCCT+CGG | - | chr1.3:28153825-28153844 | MS.gene64274:intron | 55.0% | |
| TTTGATGAGGAGCTTCGGCG+TGG | - | chr1.3:28152144-28152163 | MS.gene64274:intron | 55.0% | |
| AACTGCAACAGCAGCGGCAG+TGG | - | chr1.3:28154138-28154157 | MS.gene64274:intron | 60.0% | |
| AAGGATGGAGCGTAGCCACG+AGG | + | chr1.3:28152947-28152966 | None:intergenic | 60.0% | |
| ACCAGACTCAGGACCCCAAC+CGG | + | chr1.3:28153776-28153795 | None:intergenic | 60.0% | |
| ACGACGCGGTTCTCTACCAC+CGG | + | chr1.3:28149784-28149803 | None:intergenic | 60.0% | |
| AGGATGGAGCGTAGCCACGA+GGG | + | chr1.3:28152946-28152965 | None:intergenic | 60.0% | |
| CACACAAGGGCTGCCGAGTA+AGG | + | chr1.3:28153057-28153076 | None:intergenic | 60.0% | |
| CTCAAAAAGAACCGGGGGGG+GGG | + | chr1.3:28153906-28153925 | None:intergenic | 60.0% | |
| CTGCCGCTGCTGTTGCAGTT+TGG | + | chr1.3:28154138-28154157 | None:intergenic | 60.0% | |
| GGAAAGGAAGGCGGTAGAGG+AGG | - | chr1.3:28152373-28152392 | MS.gene64274:intron | 60.0% | |
| GGCAGCCCTTGTGTGAGTCT+TGG | - | chr1.3:28153062-28153081 | MS.gene64274:intron | 60.0% | |
| GGGGGGATAAAACCCCCCAA+AGG | + | chr1.3:28153880-28153899 | None:intergenic | 60.0% | |
| GTCCAAGGCACACACAACCG+AGG | + | chr1.3:28153845-28153864 | None:intergenic | 60.0% | |
| TCAAAAAGAACCGGGGGGGG+GGG | + | chr1.3:28153905-28153924 | None:intergenic | 60.0% | |
| AAAAAGAACCGGGGGGGGGG+GGG | + | chr1.3:28153903-28153922 | None:intergenic | 65.0% | |
| CAAAAAGAACCGGGGGGGGG+GGG | + | chr1.3:28153904-28153923 | None:intergenic | 65.0% | |
| CCTATCTCGGGGGTCCGGTT+GGG | - | chr1.3:28153759-28153778 | MS.gene64274:intron | 65.0% | |
| CTATCTCGGGGGTCCGGTTG+GGG | - | chr1.3:28153760-28153779 | MS.gene64274:intron | 65.0% | |
| GGATGGAGCGTAGCCACGAG+GGG | + | chr1.3:28152945-28152964 | None:intergenic | 65.0% | |
| GGCCTCGGTTGTGTGTGCCT+TGG | - | chr1.3:28153840-28153859 | MS.gene64274:intron | 65.0% | |
| TCCGGTTGGGGTCCTGAGTC+TGG | - | chr1.3:28153772-28153791 | MS.gene64274:intron | 65.0% | |
| TCCTATCTCGGGGGTCCGGT+TGG | - | chr1.3:28153758-28153777 | MS.gene64274:intron | 65.0% | |
| AAAAGAACCGGGGGGGGGGG+GGG | + | chr1.3:28153902-28153921 | None:intergenic | 70.0% | |
| CCCAACCGGACCCCCGAGAT+AGG | + | chr1.3:28153762-28153781 | None:intergenic | 70.0% | |
| ! | GCGTAGCCACGAGGGGTGTG+AGG | + | chr1.3:28152938-28152957 | None:intergenic | 70.0% |
| AAAGAACCGGGGGGGGGGGG+GGG | + | chr1.3:28153901-28153920 | None:intergenic | 75.0% | |
| ! | AAGAACCGGGGGGGGGGGGG+GGG | + | chr1.3:28153900-28153919 | None:intergenic | 80.0% |
| ! | AGAACCGGGGGGGGGGGGGG+GGG | + | chr1.3:28153899-28153918 | None:intergenic | 85.0% |
| ! | AACCGGGGGGGGGGGGGGGG+GGG | + | chr1.3:28153897-28153916 | None:intergenic | 90.0% |
| ! | ATCCCCCCCCCCCCCCCCCC+CGG | - | chr1.3:28153892-28153911 | MS.gene64274:intron | 90.0% |
| ! | GAACCGGGGGGGGGGGGGGG+GGG | + | chr1.3:28153898-28153917 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 28149744 | 28154502 | 28149744 | ID=MS.gene64274 |
| chr1.3 | mRNA | 28149744 | 28154502 | 28149744 | ID=MS.gene64274.t1;Parent=MS.gene64274 |
| chr1.3 | exon | 28154422 | 28154502 | 28154422 | ID=MS.gene64274.t1.exon1;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28154422 | 28154502 | 28154422 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28154001 | 28154034 | 28154001 | ID=MS.gene64274.t1.exon2;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28154001 | 28154034 | 28154001 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28152685 | 28152872 | 28152685 | ID=MS.gene64274.t1.exon3;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28152685 | 28152872 | 28152685 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28152081 | 28152144 | 28152081 | ID=MS.gene64274.t1.exon4;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28152081 | 28152144 | 28152081 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28151842 | 28151935 | 28151842 | ID=MS.gene64274.t1.exon5;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28151842 | 28151935 | 28151842 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28149946 | 28150132 | 28149946 | ID=MS.gene64274.t1.exon6;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28149946 | 28150132 | 28149946 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| chr1.3 | exon | 28149744 | 28149854 | 28149744 | ID=MS.gene64274.t1.exon7;Parent=MS.gene64274.t1 |
| chr1.3 | CDS | 28149744 | 28149854 | 28149744 | ID=cds.MS.gene64274.t1;Parent=MS.gene64274.t1 |
| Gene Sequence |
| Protein sequence |
