Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050905.t1 | XP_003626205.2 | 93.8 | 275 | 16 | 1 | 1 | 274 | 1 | 275 | 5.30E-149 | 537.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050905.t1 | G7KXI4 | 93.8 | 275 | 16 | 1 | 1 | 274 | 1 | 275 | 3.8e-149 | 537.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene050905 | -0.804787 | 1.83E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene052519 | -0.816222 | 6.18E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene053006 | -0.808144 | 3.58E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene053145 | -0.80793 | 3.97E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene054559 | -0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene055818 | -0.820199 | 7.78E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene057060 | -0.812665 | 3.78E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene057208 | -0.800051 | 1.73E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene05979 | -0.803974 | 2.70E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene060634 | 0.801293 | 9.64E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene060803 | -0.805267 | 1.45E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene064797 | 0.830046 | 3.66E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene065711 | 0.815598 | 8.52E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene06643 | -0.803295 | 3.73E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene067173 | -0.804502 | 2.09E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene068385 | -0.800941 | 1.14E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene068514 | -0.815788 | 7.73E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene068515 | -0.810463 | 1.14E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene068529 | -0.805796 | 1.12E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene070210 | -0.829927 | 3.91E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene071152 | 0.807449 | 5.03E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene071342 | -0.840131 | 1.05E-57 | -1.69E-46 |
| MS.gene050905 | MS.gene071884 | -0.800693 | 1.28E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene07205 | -0.80507 | 1.59E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene072942 | -0.837676 | 4.52E-57 | -1.69E-46 |
| MS.gene050905 | MS.gene073008 | -0.812615 | 3.88E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene074184 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene074606 | -0.802799 | 4.73E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene08806 | -0.831465 | 1.64E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene08853 | -0.826996 | 2.00E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene09283 | -0.816857 | 4.45E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene23116 | 0.916544 | 1.57E-85 | -1.69E-46 |
| MS.gene050905 | MS.gene24628 | -0.805419 | 1.35E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene27219 | 0.814041 | 1.89E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene28944 | -0.806656 | 7.40E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene30085 | -0.811955 | 5.41E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene31022 | -0.820681 | 6.03E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene35611 | -0.810712 | 1.01E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene36022 | 0.8019 | 7.24E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene36046 | -0.820064 | 8.35E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene37722 | 0.831084 | 2.04E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene38269 | 0.817257 | 3.62E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene39376 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene39695 | 0.802107 | 6.56E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene40381 | 0.808991 | 2.36E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene41121 | -0.809777 | 1.60E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene42645 | -0.807096 | 5.97E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene43215 | 0.80753 | 4.83E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene47050 | -0.819478 | 1.14E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene49161 | -0.80627 | 8.93E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene51511 | -0.803152 | 4.00E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene52357 | -0.819856 | 9.32E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene53602 | -0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene58278 | -0.801185 | 1.01E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene60568 | -0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene62393 | -0.816342 | 5.81E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene64274 | -0.800301 | 1.54E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene67316 | -0.811794 | 5.86E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene67346 | -0.813211 | 2.87E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene69891 | -0.805803 | 1.12E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene73820 | -0.840647 | 7.67E-58 | -1.69E-46 |
| MS.gene050905 | MS.gene75003 | -0.806168 | 9.38E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene77015 | -0.80509 | 1.58E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene81107 | 0.814544 | 1.46E-51 | -1.69E-46 |
| MS.gene050905 | MS.gene81375 | -0.803622 | 3.19E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene81861 | 0.822549 | 2.23E-53 | -1.69E-46 |
| MS.gene050905 | MS.gene82879 | -0.803047 | 4.20E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene85663 | -0.834738 | 2.52E-56 | -1.69E-46 |
| MS.gene050905 | MS.gene91907 | -0.806529 | 7.87E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene92188 | -0.825234 | 5.24E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene92579 | -0.8021 | 6.59E-49 | -1.69E-46 |
| MS.gene050905 | MS.gene93764 | -0.839251 | 1.77E-57 | -1.69E-46 |
| MS.gene050905 | MS.gene95625 | -0.819601 | 1.07E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene96224 | 0.826459 | 2.68E-54 | -1.69E-46 |
| MS.gene050905 | MS.gene97477 | 0.809949 | 1.47E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene97478 | 0.809492 | 1.84E-50 | -1.69E-46 |
| MS.gene050905 | MS.gene97609 | -0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene050905 | MS.gene98828 | -0.805092 | 1.58E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050905.t1 | MTR_7g112650 | 93.455 | 275 | 17 | 1 | 1 | 274 | 1 | 275 | 0.0 | 508 |
| MS.gene050905.t1 | MTR_4g015110 | 94.286 | 35 | 2 | 0 | 326 | 360 | 1 | 35 | 8.14e-13 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene050905.t1 | AT5G27710 | 60.364 | 275 | 95 | 4 | 9 | 274 | 10 | 279 | 4.28e-115 | 338 |
| MS.gene050905.t1 | AT5G27710 | 58.436 | 243 | 87 | 4 | 9 | 242 | 10 | 247 | 5.82e-96 | 286 |
Find 124 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCGACTTATTATCTCTTC+TGG | 0.152660 | 7.1:+3309404 | MS.gene050905:CDS |
| TCCTCCTCGTCACCGGAAAT+TGG | 0.182851 | 7.1:+3309527 | MS.gene050905:CDS |
| GCTCGCCTCGCTGTTGATTC+TGG | 0.254955 | 7.1:+3309630 | MS.gene050905:CDS |
| GTTCGGTCCGGCCCAATTTC+CGG | 0.262727 | 7.1:-3309539 | None:intergenic |
| GTTGATCGAGGTCCTTCTAT+TGG | 0.286664 | 7.1:+3309995 | MS.gene050905:CDS |
| AAGTCGGAGGGAGTGGCTTT+TGG | 0.287475 | 7.1:-3309390 | None:intergenic |
| CCGACAATTCCACCAAATCT+TGG | 0.314798 | 7.1:+3311285 | MS.gene050905:CDS |
| GTGGCCGCCTGAGCCCGTTT+TGG | 0.323158 | 7.1:+3309602 | MS.gene050905:CDS |
| ACCAAGTCTTCCAGAGTCTA+TGG | 0.333174 | 7.1:-3310071 | None:intergenic |
| TTGATCGAGGTCCTTCTATT+GGG | 0.346985 | 7.1:+3309996 | MS.gene050905:CDS |
| TCCGACTTATTATCTCTTCT+GGG | 0.347254 | 7.1:+3309405 | MS.gene050905:CDS |
| ACCTGGTGCCACCCAAGATT+TGG | 0.359141 | 7.1:-3311297 | None:intergenic |
| CCGTCTTCCATAGGGAGTTC+TGG | 0.369407 | 7.1:-3309834 | None:intergenic |
| CTTTGGATCTCAATTTCAAT+TGG | 0.374943 | 7.1:-3312141 | None:intergenic |
| ATGAGATACCCTTCAGTCTT+CGG | 0.379829 | 7.1:+3309273 | MS.gene050905:CDS |
| CCTCCTCGTCACCGGAAATT+GGG | 0.395672 | 7.1:+3309528 | MS.gene050905:CDS |
| TACATCGGGGATTGGGAGGG+TGG | 0.411314 | 7.1:-3312637 | None:intergenic |
| CTCGCATTACATCGGGGATT+GGG | 0.415479 | 7.1:-3312644 | None:intergenic |
| CCAAGATTTGGTGGAATTGT+CGG | 0.415928 | 7.1:-3311285 | None:intergenic |
| ATCGGGGATTGGGAGGGTGG+TGG | 0.417898 | 7.1:-3312634 | None:intergenic |
| CCTGTTCGAACCGGTGAGTT+CGG | 0.421689 | 7.1:-3309556 | None:intergenic |
| GAAATGATAACGATATGATT+TGG | 0.422232 | 7.1:+3309580 | MS.gene050905:CDS |
| CGACAATTCCACCAAATCTT+GGG | 0.422249 | 7.1:+3311286 | MS.gene050905:CDS |
| AACCGATTTGATTTATTCCA+TGG | 0.434310 | 7.1:+3310034 | MS.gene050905:CDS |
| ATCATTTCTCCTGTTCGAAC+CGG | 0.436492 | 7.1:-3309565 | None:intergenic |
| TCGGTAACCGTTGGAGAAAA+GGG | 0.437663 | 7.1:-3309501 | None:intergenic |
| ATCGGTAACCGTTGGAGAAA+AGG | 0.438477 | 7.1:-3309502 | None:intergenic |
| ACTCGCATTACATCGGGGAT+TGG | 0.439322 | 7.1:-3312645 | None:intergenic |
| GTAACTAACTGGGATGATAG+TGG | 0.443594 | 7.1:-3309688 | None:intergenic |
| AGTGGTCTTTGCGGCGGCGG+CGG | 0.444868 | 7.1:-3312567 | None:intergenic |
| TACGACGGGATTGACGAGTT+TGG | 0.446091 | 7.1:-3309442 | None:intergenic |
| CATAGGGAGTTCTGGTGAGC+TGG | 0.450173 | 7.1:-3309826 | None:intergenic |
| TTGAGTTGGCGTGCTACGAC+GGG | 0.457337 | 7.1:-3309456 | None:intergenic |
| TTGGTGGAATTGTCGGGAAA+AGG | 0.457612 | 7.1:-3311278 | None:intergenic |
| AAGACTGAAGGGTATCTCAT+TGG | 0.458926 | 7.1:-3309270 | None:intergenic |
| GCAACATCAAACCCAATAGA+AGG | 0.459101 | 7.1:-3310007 | None:intergenic |
| CAAGATTTGGTGGAATTGTC+GGG | 0.459261 | 7.1:-3311284 | None:intergenic |
| ATTGAAACTCGCATTACATC+GGG | 0.462212 | 7.1:-3312651 | None:intergenic |
| GCAAGTTCCAAAACGGGCTC+AGG | 0.462762 | 7.1:-3309609 | None:intergenic |
| GTCCATGGAATAAATCAAAT+CGG | 0.467875 | 7.1:-3310036 | None:intergenic |
| CCGAACTCACCGGTTCGAAC+AGG | 0.471024 | 7.1:+3309556 | MS.gene050905:CDS |
| AGATAATAAGTCGGAGGGAG+TGG | 0.471695 | 7.1:-3309397 | None:intergenic |
| TCGCTTGATCCTTCCACATC+GGG | 0.473179 | 7.1:-3309794 | None:intergenic |
| GAATAAATCAAATCGGTTCA+AGG | 0.474821 | 7.1:-3310029 | None:intergenic |
| ATTGAGACGATGGAGGAAGA+TGG | 0.479538 | 7.1:-3309366 | None:intergenic |
| GAAGATGGAAGAGGAAAGAA+TGG | 0.482040 | 7.1:-3309351 | None:intergenic |
| AGAAATAAACCGTCTTCCAT+AGG | 0.489093 | 7.1:-3309843 | None:intergenic |
| AGGCGAGCAAGTTCCAAAAC+GGG | 0.490630 | 7.1:-3309615 | None:intergenic |
| AGAGCGCGATGAATGGCGGC+AGG | 0.492442 | 7.1:-3309660 | None:intergenic |
| CCGATTCTCCTCCTCGTCAC+CGG | 0.497897 | 7.1:+3309520 | MS.gene050905:CDS |
| GAGGCGAGCAAGTTCCAAAA+CGG | 0.505321 | 7.1:-3309616 | None:intergenic |
| ACGAGTGGTCTTTGCGGCGG+CGG | 0.505447 | 7.1:-3312570 | None:intergenic |
| ATTTGAGGCATGATTTGAGT+TGG | 0.506345 | 7.1:-3309470 | None:intergenic |
| TGAACTTGCGAAATATTCTC+TGG | 0.514263 | 7.1:+3311249 | MS.gene050905:CDS |
| TCCATAGACTCTGGAAGACT+TGG | 0.517716 | 7.1:+3310070 | MS.gene050905:CDS |
| TCCATTACAAAAGTAGATGA+AGG | 0.519751 | 7.1:+3312165 | MS.gene050905:CDS |
| TAACTAACTGGGATGATAGT+GGG | 0.524208 | 7.1:-3309687 | None:intergenic |
| TGCGGCGGCGGCGGAACAGA+AGG | 0.528409 | 7.1:-3312558 | None:intergenic |
| AAAAGGGGACAAGGAATTTG+AGG | 0.529207 | 7.1:-3309485 | None:intergenic |
| CTTGCGAAATATTCTCTGGC+TGG | 0.532886 | 7.1:+3311253 | MS.gene050905:CDS |
| CTCTTTCTATCCATAGACTC+TGG | 0.533121 | 7.1:+3310061 | MS.gene050905:CDS |
| TGGAAGACGGTTTATTTCTG+AGG | 0.534633 | 7.1:+3309847 | MS.gene050905:CDS |
| AGAGGAAAGAATGGTGTTCG+TGG | 0.535932 | 7.1:-3309342 | None:intergenic |
| GGGGTCAAGAGCGCGATGAA+TGG | 0.537741 | 7.1:-3309667 | None:intergenic |
| CAGCTCACCAGAACTCCCTA+TGG | 0.539679 | 7.1:+3309827 | MS.gene050905:CDS |
| ATGCCGGGTATTCCCTTGCA+TGG | 0.543635 | 7.1:-3310187 | None:intergenic |
| GAAATAAACCGTCTTCCATA+GGG | 0.543980 | 7.1:-3309842 | None:intergenic |
| TGGTGCCACCCAAGATTTGG+TGG | 0.545818 | 7.1:-3311294 | None:intergenic |
| GACGAGTTTGGAACGAGGAG+TGG | 0.547074 | 7.1:-3309430 | None:intergenic |
| GAGTTCTGGTGAGCTGGCAC+CGG | 0.548486 | 7.1:-3309820 | None:intergenic |
| AGTTCCAAAACGGGCTCAGG+CGG | 0.553188 | 7.1:-3309606 | None:intergenic |
| GCATTACATCGGGGATTGGG+AGG | 0.553189 | 7.1:-3312641 | None:intergenic |
| CATTACATCGGGGATTGGGA+GGG | 0.555171 | 7.1:-3312640 | None:intergenic |
| CTCGTCACCGGAAATTGGGC+CGG | 0.557763 | 7.1:+3309532 | MS.gene050905:CDS |
| ACCAAATCTTGGGTGGCACC+AGG | 0.557895 | 7.1:+3311296 | MS.gene050905:CDS |
| TTTGAGTTGGCGTGCTACGA+CGG | 0.559770 | 7.1:-3309457 | None:intergenic |
| CCCAATTTCCGGTGACGAGG+AGG | 0.561944 | 7.1:-3309528 | None:intergenic |
| CCGGTGACGAGGAGGAGAAT+CGG | 0.563784 | 7.1:-3309520 | None:intergenic |
| AAAAGATGAAGATGATGTAA+CGG | 0.564122 | 7.1:-3309319 | None:intergenic |
| TGGAAGGATCAAGCGATGAC+CGG | 0.565520 | 7.1:+3309801 | MS.gene050905:CDS |
| TTTGAACTCATTGTTGATCG+AGG | 0.566371 | 7.1:+3309983 | MS.gene050905:CDS |
| GGAGGAGAATCGGTAACCGT+TGG | 0.570310 | 7.1:-3309510 | None:intergenic |
| ATTCCATGCAAGGGAATACC+CGG | 0.572278 | 7.1:+3310184 | MS.gene050905:CDS |
| CGGCCCAATTTCCGGTGACG+AGG | 0.574507 | 7.1:-3309531 | None:intergenic |
| ACGATGGAGGAAGATGGAAG+AGG | 0.575554 | 7.1:-3309360 | None:intergenic |
| ATCGCTTGATCCTTCCACAT+CGG | 0.577103 | 7.1:-3309795 | None:intergenic |
| ATACCCTTCAGTCTTCGGAT+TGG | 0.580395 | 7.1:+3309278 | MS.gene050905:CDS |
| ATGATAACGATATGATTTGG+TGG | 0.580672 | 7.1:+3309583 | MS.gene050905:CDS |
| TCGAACCGGTGAGTTCGGTC+CGG | 0.581346 | 7.1:-3309551 | None:intergenic |
| GATTGAAACTCGCATTACAT+CGG | 0.584356 | 7.1:-3312652 | None:intergenic |
| GTCAAGAGCGCGATGAATGG+CGG | 0.585038 | 7.1:-3309664 | None:intergenic |
| CGCCTCGCTGTTGATTCTGG+TGG | 0.587077 | 7.1:+3309633 | MS.gene050905:CDS |
| TGAATCATCATATGTCACAT+TGG | 0.587970 | 7.1:-3311225 | None:intergenic |
| ACTCTACTCCGACATGGCCA+CGG | 0.591659 | 7.1:+3312605 | MS.gene050905:CDS |
| GGATGAATCCGTGGCCATGT+CGG | 0.594422 | 7.1:-3312613 | None:intergenic |
| ACGAGTTTGGAACGAGGAGT+GGG | 0.596282 | 7.1:-3309429 | None:intergenic |
| CAGAAGAGATAATAAGTCGG+AGG | 0.598288 | 7.1:-3309403 | None:intergenic |
| AAAATGTTTCCGTACAACAT+GGG | 0.599086 | 7.1:+3310218 | MS.gene050905:CDS |
| AGTGCCAATCCGAAGACTGA+AGG | 0.600738 | 7.1:-3309282 | None:intergenic |
| AGAAGAGATAATAAGTCGGA+GGG | 0.608729 | 7.1:-3309402 | None:intergenic |
| ACGGTGACGAGTGGTCTTTG+CGG | 0.612877 | 7.1:-3312576 | None:intergenic |
| GTGCCAATCCGAAGACTGAA+GGG | 0.613768 | 7.1:-3309281 | None:intergenic |
| TTGGGCCGGACCGAACTCAC+CGG | 0.616716 | 7.1:+3309546 | MS.gene050905:CDS |
| TGGATAGAAAGAGATGTCCA+TGG | 0.616722 | 7.1:-3310051 | None:intergenic |
| ATGATGTAACGGAAAATGAG+AGG | 0.617921 | 7.1:-3309308 | None:intergenic |
| AATGTGGCAGGTACCCGATG+TGG | 0.622239 | 7.1:+3309781 | MS.gene050905:intron |
| CCGTTGGAGAAAAGGGGACA+AGG | 0.625902 | 7.1:-3309494 | None:intergenic |
| TGGCAGGTACCCGATGTGGA+AGG | 0.626234 | 7.1:+3309785 | MS.gene050905:intron |
| CCAGAACTCCCTATGGAAGA+CGG | 0.630084 | 7.1:+3309834 | MS.gene050905:CDS |
| CAATTCCACCAAATCTTGGG+TGG | 0.633630 | 7.1:+3311289 | MS.gene050905:CDS |
| TAACACTAATTTCAACGATG+TGG | 0.634447 | 7.1:+3312188 | MS.gene050905:CDS |
| GAGGGTGGTGGATGAATCCG+TGG | 0.637139 | 7.1:-3312622 | None:intergenic |
| GAGCGCGATGAATGGCGGCA+GGG | 0.637544 | 7.1:-3309659 | None:intergenic |
| CCACACACTCTACTCCGACA+TGG | 0.643886 | 7.1:+3312599 | MS.gene050905:CDS |
| AACTAACTGGGATGATAGTG+GGG | 0.647235 | 7.1:-3309686 | None:intergenic |
| CGGTAACCGTTGGAGAAAAG+GGG | 0.656704 | 7.1:-3309500 | None:intergenic |
| GTCGGAGTAGAGTGTGTGGA+CGG | 0.664855 | 7.1:-3312595 | None:intergenic |
| GTGACGAGTGGTCTTTGCGG+CGG | 0.670848 | 7.1:-3312573 | None:intergenic |
| CCATGTCGGAGTAGAGTGTG+TGG | 0.677641 | 7.1:-3312599 | None:intergenic |
| ACCCAGAAGAGATAATAAGT+CGG | 0.680610 | 7.1:-3309406 | None:intergenic |
| AGTGTGTGGACGGTGACGAG+TGG | 0.681531 | 7.1:-3312585 | None:intergenic |
| GGATTGACGAGTTTGGAACG+AGG | 0.693784 | 7.1:-3309435 | None:intergenic |
| TTGAAACTCGCATTACATCG+GGG | 0.716856 | 7.1:-3312650 | None:intergenic |
| CACCACCAGAATCAACAGCG+AGG | 0.763635 | 7.1:-3309635 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAATTAGTAATTAGTT+AGG | - | chr7.1:3311025-3311044 | None:intergenic | 10.0% |
| !! | TATATATATATATATGAGTC+AGG | + | chr7.1:3312434-3312453 | MS.gene050905:intron | 15.0% |
| !!! | ATCAGTTTAAAATTTTCAAA+AGG | - | chr7.1:3311490-3311509 | None:intergenic | 15.0% |
| !!! | TTATTTCTTACATAAATAAC+AGG | - | chr7.1:3310755-3310774 | None:intergenic | 15.0% |
| !!! | TTTTGTAAAATAATTGTTTC+AGG | + | chr7.1:3311929-3311948 | MS.gene050905:intron | 15.0% |
| !! | AATTAGTAATTAGTTAGGAT+TGG | - | chr7.1:3311020-3311039 | None:intergenic | 20.0% |
| !! | AATTATGATAACTTTACTGA+GGG | - | chr7.1:3311324-3311343 | None:intergenic | 20.0% |
| !! | TACATATCAATTGAGTAAAT+TGG | + | chr7.1:3312050-3312069 | MS.gene050905:intron | 20.0% |
| !! | TTATGAGAATTGATAGAATA+TGG | + | chr7.1:3312295-3312314 | MS.gene050905:intron | 20.0% |
| !! | TTATGAGAATTGATAGAATA+TGG | - | chr7.1:3312314-3312295 | None:intergenic | 20.0% |
| !!! | AAACAATTTTGTAACTAACT+GGG | - | chr7.1:3309701-3309720 | None:intergenic | 20.0% |
| !!! | AACATTTTTTTATCATATGC+CGG | - | chr7.1:3310206-3310225 | None:intergenic | 20.0% |
| !!! | ACTCTTTTTTTAAGAGAATT+AGG | - | chr7.1:3310962-3310981 | None:intergenic | 20.0% |
| !!! | CTCTTTTTTTAAGAGAATTA+GGG | - | chr7.1:3310961-3310980 | None:intergenic | 20.0% |
| ! | AAAAGATGAAGATGATGTAA+CGG | - | chr7.1:3309322-3309341 | None:intergenic | 25.0% |
| ! | AATAGTGACATGAACAAAAA+TGG | - | chr7.1:3311827-3311846 | None:intergenic | 25.0% |
| ! | ACCATTTGATTAAAAGCTAA+TGG | + | chr7.1:3311693-3311712 | MS.gene050905:intron | 25.0% |
| ! | ACCATTTGATTAAAAGTTGA+TGG | - | chr7.1:3312351-3312370 | None:intergenic | 25.0% |
| ! | ATATCTAATCCAAAACTGAA+AGG | - | chr7.1:3311574-3311593 | None:intergenic | 25.0% |
| ! | ATGAGTATCTTATATGAGAA+TGG | + | chr7.1:3311655-3311674 | MS.gene050905:intron | 25.0% |
| ! | ATGAGTATCTTATATGAGAA+TGG | - | chr7.1:3311674-3311655 | None:intergenic | 25.0% |
| ! | ATTGAAACTATTGAGAAGTA+TGG | - | chr7.1:3312092-3312111 | None:intergenic | 25.0% |
| ! | CAATTATGATAACTTTACTG+AGG | - | chr7.1:3311325-3311344 | None:intergenic | 25.0% |
| ! | TATTGTAAATTGAACGTTAC+CGG | - | chr7.1:3311978-3311997 | None:intergenic | 25.0% |
| ! | TCAATTGAGTAAATTGGATT+TGG | + | chr7.1:3312056-3312075 | MS.gene050905:intron | 25.0% |
| ! | TCTTACATAAATAACAGGAA+GGG | - | chr7.1:3310750-3310769 | None:intergenic | 25.0% |
| ! | TTCTTACATAAATAACAGGA+AGG | - | chr7.1:3310751-3310770 | None:intergenic | 25.0% |
| !! | AAAAGAAGAAGCATAATTTC+TGG | - | chr7.1:3311897-3311916 | None:intergenic | 25.0% |
| !! | ACCATCAACTTTTAATCAAA+TGG | + | chr7.1:3312347-3312366 | MS.gene050905:intron | 25.0% |
| !! | AGTTTCAATTTCAACTTTTG+AGG | + | chr7.1:3309724-3309743 | MS.gene050905:intron | 25.0% |
| !! | CAAACAATTTTGTAACTAAC+TGG | - | chr7.1:3309702-3309721 | None:intergenic | 25.0% |
| !! | GAAATGATAACGATATGATT+TGG | + | chr7.1:3309580-3309599 | MS.gene050905:CDS | 25.0% |
| !! | TTGATTTTTCCTTTCAGTTT+TGG | + | chr7.1:3311562-3311581 | MS.gene050905:intron | 25.0% |
| !! | TTTTGCAAAATAATTGGTAC+CGG | + | chr7.1:3311956-3311975 | MS.gene050905:intron | 25.0% |
| !! | TTTTTATAACTAGAAAGAGG+AGG | + | chr7.1:3310631-3310650 | MS.gene050905:intron | 25.0% |
| !!! | ACATTTTTTTATCATATGCC+GGG | - | chr7.1:3310205-3310224 | None:intergenic | 25.0% |
| !!! | ACCATTAGCTTTTAATCAAA+TGG | - | chr7.1:3311697-3311716 | None:intergenic | 25.0% |
| !!! | ATTTTGTACTGTTATTTCTC+TGG | + | chr7.1:3310357-3310376 | MS.gene050905:intron | 25.0% |
| !!! | CTTTCTAGTTATAAAAAACC+AGG | - | chr7.1:3310628-3310647 | None:intergenic | 25.0% |
| !!! | GGTCTTTTTTGCAAAATAAT+TGG | + | chr7.1:3311950-3311969 | MS.gene050905:intron | 25.0% |
| !!! | GGTTTTTTATAACTAGAAAG+AGG | + | chr7.1:3310628-3310647 | MS.gene050905:intron | 25.0% |
| AAAAATGTTTCCGTACAACA+TGG | + | chr7.1:3310217-3310236 | MS.gene050905:CDS | 30.0% | |
| AAAATGTTTCCGTACAACAT+GGG | + | chr7.1:3310218-3310237 | MS.gene050905:CDS | 30.0% | |
| AACTTGGATATTATGAGGTA+TGG | - | chr7.1:3310913-3310932 | None:intergenic | 30.0% | |
| ACTTGGATATTATGAGGTAT+GGG | - | chr7.1:3310912-3310931 | None:intergenic | 30.0% | |
| CTTTGGATCTCAATTTCAAT+TGG | - | chr7.1:3312144-3312163 | None:intergenic | 30.0% | |
| GACAGTTACAAATTACAATG+TGG | + | chr7.1:3309765-3309784 | MS.gene050905:intron | 30.0% | |
| GTAAGTTTCATTAGAGAGAA+AGG | + | chr7.1:3310470-3310489 | MS.gene050905:intron | 30.0% | |
| GTCCATGGAATAAATCAAAT+CGG | - | chr7.1:3310039-3310058 | None:intergenic | 30.0% | |
| TAACACTAATTTCAACGATG+TGG | + | chr7.1:3312188-3312207 | MS.gene050905:CDS | 30.0% | |
| TAACAGAACATCTTAAGATG+TGG | - | chr7.1:3310276-3310295 | None:intergenic | 30.0% | |
| TAACTCTTTGCATGATGAAT+AGG | - | chr7.1:3311431-3311450 | None:intergenic | 30.0% | |
| TAGTTTCAATTTCATAGCAC+AGG | + | chr7.1:3312102-3312121 | MS.gene050905:intron | 30.0% | |
| TCCATTACAAAAGTAGATGA+AGG | + | chr7.1:3312165-3312184 | MS.gene050905:CDS | 30.0% | |
| TGAATCATCATATGTCACAT+TGG | - | chr7.1:3311228-3311247 | None:intergenic | 30.0% | |
| TGTCTTTGCCTTAAAATTAG+AGG | + | chr7.1:3310552-3310571 | MS.gene050905:intron | 30.0% | |
| TTATGTTCTCTCTCATATCA+GGG | - | chr7.1:3311086-3311105 | None:intergenic | 30.0% | |
| TTCTAGCATGCTTATGATAT+TGG | - | chr7.1:3310814-3310833 | None:intergenic | 30.0% | |
| TTTAAGAGAATTAGGGCTTA+TGG | - | chr7.1:3310954-3310973 | None:intergenic | 30.0% | |
| TTTGTAACTGTCATAATGAG+CGG | - | chr7.1:3309757-3309776 | None:intergenic | 30.0% | |
| ! | ATGATAACGATATGATTTGG+TGG | + | chr7.1:3309583-3309602 | MS.gene050905:CDS | 30.0% |
| ! | ATTGTTCTTTTTCTGATTGC+AGG | + | chr7.1:3309934-3309953 | MS.gene050905:intron | 30.0% |
| ! | CAAACACCACTTTAAAAGTT+GGG | - | chr7.1:3311183-3311202 | None:intergenic | 30.0% |
| ! | GAATAAATCAAATCGGTTCA+AGG | - | chr7.1:3310032-3310051 | None:intergenic | 30.0% |
| ! | GATACGATCCTCTAATTTTA+AGG | - | chr7.1:3310563-3310582 | None:intergenic | 30.0% |
| ! | TATTGTGGCATTTGATAACT+TGG | + | chr7.1:3311591-3311610 | MS.gene050905:intron | 30.0% |
| ! | TTGAGGGATTTAAAGTTTGT+TGG | - | chr7.1:3311048-3311067 | None:intergenic | 30.0% |
| ! | TTGGGCTTTATAACTTATGT+AGG | + | chr7.1:3310389-3310408 | MS.gene050905:intron | 30.0% |
| !! | AACCGATTTGATTTATTCCA+TGG | + | chr7.1:3310034-3310053 | MS.gene050905:CDS | 30.0% |
| !! | ACCTTCATCTACTTTTGTAA+TGG | - | chr7.1:3312169-3312188 | None:intergenic | 30.0% |
| !! | CTACTTTTGTAATGGAACTT+TGG | - | chr7.1:3312161-3312180 | None:intergenic | 30.0% |
| !! | CTATTAAGCTTTCAAGTTGT+AGG | + | chr7.1:3310321-3310340 | MS.gene050905:intron | 30.0% |
| !!! | CAGTTTTGGATTAGATATTG+TGG | + | chr7.1:3311576-3311595 | MS.gene050905:intron | 30.0% |
| !!! | TGGTTTTATGAATCCTTTCA+GGG | + | chr7.1:3311201-3311220 | MS.gene050905:intron | 30.0% |
| !!! | TTGGTTTTATGAATCCTTTC+AGG | + | chr7.1:3311200-3311219 | MS.gene050905:intron | 30.0% |
| AAATAACAGGAAGGGAAGAT+AGG | - | chr7.1:3310742-3310761 | None:intergenic | 35.0% | |
| AATAACAGGAAGGGAAGATA+GGG | - | chr7.1:3310741-3310760 | None:intergenic | 35.0% | |
| ACATGAACAAAAATGGTGGT+GGG | - | chr7.1:3311820-3311839 | None:intergenic | 35.0% | |
| ACCCAGAAGAGATAATAAGT+CGG | - | chr7.1:3309409-3309428 | None:intergenic | 35.0% | |
| AGAAATAAACCGTCTTCCAT+AGG | - | chr7.1:3309846-3309865 | None:intergenic | 35.0% | |
| AGAAGAGATAATAAGTCGGA+GGG | - | chr7.1:3309405-3309424 | None:intergenic | 35.0% | |
| AGAGATCGACGGTTAATATT+TGG | - | chr7.1:3312471-3312490 | None:intergenic | 35.0% | |
| AGTGACATGAACAAAAATGG+TGG | - | chr7.1:3311824-3311843 | None:intergenic | 35.0% | |
| ATAGTTAGAAGAGGTAACAC+AGG | - | chr7.1:3310986-3311005 | None:intergenic | 35.0% | |
| ATATATGAGAGCCTCAAGTA+TGG | + | chr7.1:3311517-3311536 | MS.gene050905:intron | 35.0% | |
| ATCGGAACTTGGATATTATG+AGG | - | chr7.1:3310918-3310937 | None:intergenic | 35.0% | |
| ATGCAACTCACAAATCTTTG+AGG | + | chr7.1:3310674-3310693 | MS.gene050905:intron | 35.0% | |
| ATTGAAACTCGCATTACATC+GGG | - | chr7.1:3312654-3312673 | None:intergenic | 35.0% | |
| ATTTCTCTGGATCTTGATGT+TGG | + | chr7.1:3310370-3310389 | MS.gene050905:intron | 35.0% | |
| CCTTAAGTGGAGGAAATTTA+CGG | + | chr7.1:3310439-3310458 | MS.gene050905:intron | 35.0% | |
| CTTAGATCAAAAGAGATCGA+CGG | - | chr7.1:3312482-3312501 | None:intergenic | 35.0% | |
| CTTGGATATTATGAGGTATG+GGG | - | chr7.1:3310911-3310930 | None:intergenic | 35.0% | |
| GAAATAAACCGTCTTCCATA+GGG | - | chr7.1:3309845-3309864 | None:intergenic | 35.0% | |
| GACTCTTGTATGTTAGTTGA+GGG | - | chr7.1:3311064-3311083 | None:intergenic | 35.0% | |
| GAGAAGGAACAAATTGATGA+TGG | + | chr7.1:3312241-3312260 | MS.gene050905:intron | 35.0% | |
| GATTGAAACTCGCATTACAT+CGG | - | chr7.1:3312655-3312674 | None:intergenic | 35.0% | |
| GTTACAAATTACAATGTGGC+AGG | + | chr7.1:3309769-3309788 | MS.gene050905:intron | 35.0% | |
| GTTATGACTGACATAGTTAG+AGG | - | chr7.1:3310782-3310801 | None:intergenic | 35.0% | |
| GTTATGTTCTCTCTCATATC+AGG | - | chr7.1:3311087-3311106 | None:intergenic | 35.0% | |
| TAACTAACTGGGATGATAGT+GGG | - | chr7.1:3309690-3309709 | None:intergenic | 35.0% | |
| TAGGCATTTGATGTGAGAAA+TGG | + | chr7.1:3310408-3310427 | MS.gene050905:intron | 35.0% | |
| TCCGACTTATTATCTCTTCT+GGG | + | chr7.1:3309405-3309424 | MS.gene050905:CDS | 35.0% | |
| TGAACTTGCGAAATATTCTC+TGG | + | chr7.1:3311249-3311268 | MS.gene050905:CDS | 35.0% | |
| TGACAAAAACCCATGTTGTA+CGG | - | chr7.1:3310230-3310249 | None:intergenic | 35.0% | |
| TGCAACTCACAAATCTTTGA+GGG | + | chr7.1:3310675-3310694 | MS.gene050905:intron | 35.0% | |
| TTTCTCTGGATCTTGATGTT+GGG | + | chr7.1:3310371-3310390 | MS.gene050905:intron | 35.0% | |
| TTTGAACTCATTGTTGATCG+AGG | + | chr7.1:3309983-3310002 | MS.gene050905:CDS | 35.0% | |
| ! | ATGATGTAACGGAAAATGAG+AGG | - | chr7.1:3309311-3309330 | None:intergenic | 35.0% |
| ! | ATTTGAGGCATGATTTGAGT+TGG | - | chr7.1:3309473-3309492 | None:intergenic | 35.0% |
| ! | ATTTTGCAGATTCCATGCAA+GGG | + | chr7.1:3310175-3310194 | MS.gene050905:intron | 35.0% |
| ! | CCAAACACCACTTTAAAAGT+TGG | - | chr7.1:3311184-3311203 | None:intergenic | 35.0% |
| ! | GCATGCTTATGATATTGGTT+AGG | - | chr7.1:3310809-3310828 | None:intergenic | 35.0% |
| ! | GTCGATCTCTTTTGATCTAA+GGG | + | chr7.1:3312481-3312500 | MS.gene050905:intron | 35.0% |
| ! | TTGTCTGAGATAGTTAGAAG+AGG | - | chr7.1:3310995-3311014 | None:intergenic | 35.0% |
| !! | AAGGAACAAATTGATGATGG+TGG | + | chr7.1:3312244-3312263 | MS.gene050905:intron | 35.0% |
| !! | AGGAACAAATTGATGATGGT+GGG | + | chr7.1:3312245-3312264 | MS.gene050905:intron | 35.0% |
| !! | CGGTTAATATTTGGTGTCAA+CGG | - | chr7.1:3312462-3312481 | None:intergenic | 35.0% |
| !! | TTGAGTCCCAACTTTTAAAG+TGG | + | chr7.1:3311174-3311193 | MS.gene050905:intron | 35.0% |
| !!! | CCAACTTTTAAAGTGGTGTT+TGG | + | chr7.1:3311181-3311200 | MS.gene050905:intron | 35.0% |
| !!! | TTCGGATCTTGTTTTGTTGA+TGG | - | chr7.1:3311855-3311874 | None:intergenic | 35.0% |
| AAAAGGGGACAAGGAATTTG+AGG | - | chr7.1:3309488-3309507 | None:intergenic | 40.0% | |
| AAAATCGAATCCTTGTGGCA+GGG | - | chr7.1:3310711-3310730 | None:intergenic | 40.0% | |
| ACAGTCGATATTGAATCCCA+AGG | + | chr7.1:3309880-3309899 | MS.gene050905:intron | 40.0% | |
| ATAACTAGAAAGAGGAGGAG+TGG | + | chr7.1:3310636-3310655 | MS.gene050905:intron | 40.0% | |
| ATCATTTCTCCTGTTCGAAC+CGG | - | chr7.1:3309568-3309587 | None:intergenic | 40.0% | |
| ATGAGATACCCTTCAGTCTT+CGG | + | chr7.1:3309273-3309292 | MS.gene050905:CDS | 40.0% | |
| ATTGCTTACCACCATACTTG+AGG | - | chr7.1:3311531-3311550 | None:intergenic | 40.0% | |
| CAAAAAGCTAGGTGTCAAGA+GGG | + | chr7.1:3310848-3310867 | MS.gene050905:intron | 40.0% | |
| CAGAAGAGATAATAAGTCGG+AGG | - | chr7.1:3309406-3309425 | None:intergenic | 40.0% | |
| CAGTCGATATTGAATCCCAA+GGG | + | chr7.1:3309881-3309900 | MS.gene050905:intron | 40.0% | |
| CCGTAAATTTCCTCCACTTA+AGG | - | chr7.1:3310442-3310461 | None:intergenic | 40.0% | |
| CGACAATTCCACCAAATCTT+GGG | + | chr7.1:3311286-3311305 | MS.gene050905:CDS | 40.0% | |
| CGATGAAAATCGAATCCTTG+TGG | - | chr7.1:3310716-3310735 | None:intergenic | 40.0% | |
| CTCCGACTTATTATCTCTTC+TGG | + | chr7.1:3309404-3309423 | MS.gene050905:CDS | 40.0% | |
| CTCTTTCTATCCATAGACTC+TGG | + | chr7.1:3310061-3310080 | MS.gene050905:CDS | 40.0% | |
| GAAGATGGAAGAGGAAAGAA+TGG | - | chr7.1:3309354-3309373 | None:intergenic | 40.0% | |
| GACATGAACAAAAATGGTGG+TGG | - | chr7.1:3311821-3311840 | None:intergenic | 40.0% | |
| GCAACATCAAACCCAATAGA+AGG | - | chr7.1:3310010-3310029 | None:intergenic | 40.0% | |
| GGACTCTTGTATGTTAGTTG+AGG | - | chr7.1:3311065-3311084 | None:intergenic | 40.0% | |
| GTAACTAACTGGGATGATAG+TGG | - | chr7.1:3309691-3309710 | None:intergenic | 40.0% | |
| GTATCTCACTTGTTTGTGAG+TGG | + | chr7.1:3310578-3310597 | MS.gene050905:intron | 40.0% | |
| GTGAATGTGAATTGCAAGTG+TGG | + | chr7.1:3312210-3312229 | MS.gene050905:intron | 40.0% | |
| GTGAGTTGCATTCATCATTG+AGG | - | chr7.1:3310665-3310684 | None:intergenic | 40.0% | |
| TGCATGTAAACTACTCTCAG+AGG | + | chr7.1:3312526-3312545 | MS.gene050905:intron | 40.0% | |
| TGGATAGAAAGAGATGTCCA+TGG | - | chr7.1:3310054-3310073 | None:intergenic | 40.0% | |
| TTGAAACTCGCATTACATCG+GGG | - | chr7.1:3312653-3312672 | None:intergenic | 40.0% | |
| TTGAGGCTCTCATATATCTG+AGG | - | chr7.1:3311514-3311533 | None:intergenic | 40.0% | |
| TTGATCGAGGTCCTTCTATT+GGG | + | chr7.1:3309996-3310015 | MS.gene050905:CDS | 40.0% | |
| ! | AACATGGGTTTTTGTCAGAG+AGG | + | chr7.1:3310233-3310252 | MS.gene050905:CDS | 40.0% |
| ! | AACTAACTGGGATGATAGTG+GGG | - | chr7.1:3309689-3309708 | None:intergenic | 40.0% |
| ! | CATTTTGCAGATTCCATGCA+AGG | + | chr7.1:3310174-3310193 | MS.gene050905:intron | 40.0% |
| ! | CGTCGATCTCTTTTGATCTA+AGG | + | chr7.1:3312480-3312499 | MS.gene050905:intron | 40.0% |
| ! | TCAAGTTGTAGGTCATGCTT+TGG | + | chr7.1:3310332-3310351 | MS.gene050905:intron | 40.0% |
| !! | ACAAATTGATGATGGTGGGT+TGG | + | chr7.1:3312249-3312268 | MS.gene050905:intron | 40.0% |
| !! | ATAACTTTACTGAGGGTACC+TGG | - | chr7.1:3311317-3311336 | None:intergenic | 40.0% |
| !! | CAAGATTTGGTGGAATTGTC+GGG | - | chr7.1:3311287-3311306 | None:intergenic | 40.0% |
| !! | CCAAGATTTGGTGGAATTGT+CGG | - | chr7.1:3311288-3311307 | None:intergenic | 40.0% |
| !! | TGGAAGACGGTTTATTTCTG+AGG | + | chr7.1:3309847-3309866 | MS.gene050905:CDS | 40.0% |
| !! | TTGACACCTAGCTTTTTGGA+GGG | - | chr7.1:3310846-3310865 | None:intergenic | 40.0% |
| AAATCGAATCCTTGTGGCAG+GGG | - | chr7.1:3310710-3310729 | None:intergenic | 45.0% | |
| AAGTGTGGAACACACAGAGA+AGG | + | chr7.1:3312225-3312244 | MS.gene050905:intron | 45.0% | |
| AATGGATCCTCTGCCTTAAG+TGG | + | chr7.1:3310426-3310445 | MS.gene050905:intron | 45.0% | |
| AATGGCGTTGTTGGAGAAGA+TGG | - | chr7.1:3311786-3311805 | None:intergenic | 45.0% | |
| ACCAAGTCTTCCAGAGTCTA+TGG | - | chr7.1:3310074-3310093 | None:intergenic | 45.0% | |
| AGAGGAAAGAATGGTGTTCG+TGG | - | chr7.1:3309345-3309364 | None:intergenic | 45.0% | |
| AGATAATAAGTCGGAGGGAG+TGG | - | chr7.1:3309400-3309419 | None:intergenic | 45.0% | |
| AGTACTCTCTCTTTCACCCT+TGG | - | chr7.1:3309900-3309919 | None:intergenic | 45.0% | |
| ATACCCTTCAGTCTTCGGAT+TGG | + | chr7.1:3309278-3309297 | MS.gene050905:CDS | 45.0% | |
| ATCGCTTGATCCTTCCACAT+CGG | - | chr7.1:3309798-3309817 | None:intergenic | 45.0% | |
| ATCGGTAACCGTTGGAGAAA+AGG | - | chr7.1:3309505-3309524 | None:intergenic | 45.0% | |
| ATGTCACATTGGACCCTGAA+AGG | - | chr7.1:3311217-3311236 | None:intergenic | 45.0% | |
| ATTCCATGCAAGGGAATACC+CGG | + | chr7.1:3310184-3310203 | MS.gene050905:CDS | 45.0% | |
| ATTGAGACGATGGAGGAAGA+TGG | - | chr7.1:3309369-3309388 | None:intergenic | 45.0% | |
| ATTTCCTCCACTTAAGGCAG+AGG | - | chr7.1:3310436-3310455 | None:intergenic | 45.0% | |
| CAATTCCACCAAATCTTGGG+TGG | + | chr7.1:3311289-3311308 | MS.gene050905:CDS | 45.0% | |
| CCAAAAAGCTAGGTGTCAAG+AGG | + | chr7.1:3310847-3310866 | MS.gene050905:intron | 45.0% | |
| CCGACAATTCCACCAAATCT+TGG | + | chr7.1:3311285-3311304 | MS.gene050905:CDS | 45.0% | |
| CTTGCGAAATATTCTCTGGC+TGG | + | chr7.1:3311253-3311272 | MS.gene050905:CDS | 45.0% | |
| GAAAATCGAATCCTTGTGGC+AGG | - | chr7.1:3310712-3310731 | None:intergenic | 45.0% | |
| GAGAATTAGGGCTTATGGCA+CGG | - | chr7.1:3310949-3310968 | None:intergenic | 45.0% | |
| GTACTCTCTCTTTCACCCTT+GGG | - | chr7.1:3309899-3309918 | None:intergenic | 45.0% | |
| GTGAAACCCTCCAAAAAGCT+AGG | + | chr7.1:3310837-3310856 | MS.gene050905:intron | 45.0% | |
| GTTGATCGAGGTCCTTCTAT+TGG | + | chr7.1:3309995-3310014 | MS.gene050905:CDS | 45.0% | |
| GTTTGTGAGTGGACATGAGA+CGG | + | chr7.1:3310589-3310608 | MS.gene050905:intron | 45.0% | |
| TATGAGAGCCTCAAGTATGG+TGG | + | chr7.1:3311520-3311539 | MS.gene050905:intron | 45.0% | |
| TATGGCACGGAGTTTGTGAT+CGG | - | chr7.1:3310936-3310955 | None:intergenic | 45.0% | |
| TCGGTAACCGTTGGAGAAAA+GGG | - | chr7.1:3309504-3309523 | None:intergenic | 45.0% | |
| TTGGTGGAATTGTCGGGAAA+AGG | - | chr7.1:3311281-3311300 | None:intergenic | 45.0% | |
| TTTGTGAGTGGACATGAGAC+GGG | + | chr7.1:3310590-3310609 | MS.gene050905:intron | 45.0% | |
| ! | TCCATAGACTCTGGAAGACT+TGG | + | chr7.1:3310070-3310089 | MS.gene050905:CDS | 45.0% |
| !! | AGCTTTTTGGAGGGTTTCAC+TGG | - | chr7.1:3310837-3310856 | None:intergenic | 45.0% |
| !! | CCTCTTGACACCTAGCTTTT+TGG | - | chr7.1:3310850-3310869 | None:intergenic | 45.0% |
| !! | CTTGACACCTAGCTTTTTGG+AGG | - | chr7.1:3310847-3310866 | None:intergenic | 45.0% |
| !!! | TTTTGGGATTGAGACGATGG+AGG | - | chr7.1:3309376-3309395 | None:intergenic | 45.0% |
| !! | ATATATATATATATATATAG+AGG | + | chr7.1:3311617-3311636 | MS.gene050905:intron | 5.0% |
| !! | ATATATATATATATATATAG+AGG | - | chr7.1:3311636-3311617 | None:intergenic | 5.0% |
| !! | TTATTATCAATTAAAATATT+CGG | - | chr7.1:3311873-3311892 | None:intergenic | 5.0% |
| !!! | TAAATTTTATGAATAATAAT+TGG | + | chr7.1:3311400-3311419 | MS.gene050905:intron | 5.0% |
| AAGAGAGAGCCACAGTGTGT+CGG | + | chr7.1:3310529-3310548 | MS.gene050905:intron | 50.0% | |
| AATCGAATCCTTGTGGCAGG+GGG | - | chr7.1:3310709-3310728 | None:intergenic | 50.0% | |
| ACGATGGAGGAAGATGGAAG+AGG | - | chr7.1:3309363-3309382 | None:intergenic | 50.0% | |
| ACTCGCATTACATCGGGGAT+TGG | - | chr7.1:3312648-3312667 | None:intergenic | 50.0% | |
| AGGCGAGCAAGTTCCAAAAC+GGG | - | chr7.1:3309618-3309637 | None:intergenic | 50.0% | |
| AGTGCCAATCCGAAGACTGA+AGG | - | chr7.1:3309285-3309304 | None:intergenic | 50.0% | |
| CATTACATCGGGGATTGGGA+GGG | - | chr7.1:3312643-3312662 | None:intergenic | 50.0% | |
| CCAGAACTCCCTATGGAAGA+CGG | + | chr7.1:3309834-3309853 | MS.gene050905:CDS | 50.0% | |
| CGGAGTTTGTGATCGGAACT+TGG | - | chr7.1:3310929-3310948 | None:intergenic | 50.0% | |
| CGGTAACCGTTGGAGAAAAG+GGG | - | chr7.1:3309503-3309522 | None:intergenic | 50.0% | |
| CTCGCATTACATCGGGGATT+GGG | - | chr7.1:3312647-3312666 | None:intergenic | 50.0% | |
| GACATGAGCAATGGCGTTGT+TGG | - | chr7.1:3311795-3311814 | None:intergenic | 50.0% | |
| GAGGCGAGCAAGTTCCAAAA+CGG | - | chr7.1:3309619-3309638 | None:intergenic | 50.0% | |
| GCGTTGTTGGAGAAGATGGA+GGG | - | chr7.1:3311782-3311801 | None:intergenic | 50.0% | |
| GTGCCAATCCGAAGACTGAA+GGG | - | chr7.1:3309284-3309303 | None:intergenic | 50.0% | |
| TACGACGGGATTGACGAGTT+TGG | - | chr7.1:3309445-3309464 | None:intergenic | 50.0% | |
| TCGCTTGATCCTTCCACATC+GGG | - | chr7.1:3309797-3309816 | None:intergenic | 50.0% | |
| TGGAAGGATCAAGCGATGAC+CGG | + | chr7.1:3309801-3309820 | MS.gene050905:CDS | 50.0% | |
| TTGTGAGTGGACATGAGACG+GGG | + | chr7.1:3310591-3310610 | MS.gene050905:intron | 50.0% | |
| ! | ACGAGTTTGGAACGAGGAGT+GGG | - | chr7.1:3309432-3309451 | None:intergenic | 50.0% |
| ! | CCTTGTCCCCTTTTCTCCAA+CGG | + | chr7.1:3309494-3309513 | MS.gene050905:CDS | 50.0% |
| ! | GGATTGACGAGTTTGGAACG+AGG | - | chr7.1:3309438-3309457 | None:intergenic | 50.0% |
| ! | TGGTGGGTAGACATGAGCAA+TGG | - | chr7.1:3311804-3311823 | None:intergenic | 50.0% |
| !! | TGATGGTGGGTTGGAGAAGA+TGG | + | chr7.1:3312258-3312277 | MS.gene050905:intron | 50.0% |
| !! | TTTGAGTTGGCGTGCTACGA+CGG | - | chr7.1:3309460-3309479 | None:intergenic | 50.0% |
| !!! | GGCTTTTGGGATTGAGACGA+TGG | - | chr7.1:3309379-3309398 | None:intergenic | 50.0% |
| AATGTGGCAGGTACCCGATG+TGG | + | chr7.1:3309781-3309800 | MS.gene050905:intron | 55.0% | |
| ACCAAATCTTGGGTGGCACC+AGG | + | chr7.1:3311296-3311315 | MS.gene050905:CDS | 55.0% | |
| ACGGTGACGAGTGGTCTTTG+CGG | - | chr7.1:3312579-3312598 | None:intergenic | 55.0% | |
| ACTCTACTCCGACATGGCCA+CGG | + | chr7.1:3312605-3312624 | MS.gene050905:CDS | 55.0% | |
| ATCGAATCCTTGTGGCAGGG+GGG | - | chr7.1:3310708-3310727 | None:intergenic | 55.0% | |
| ATGCCGGGTATTCCCTTGCA+TGG | - | chr7.1:3310190-3310209 | None:intergenic | 55.0% | |
| CACCACCAGAATCAACAGCG+AGG | - | chr7.1:3309638-3309657 | None:intergenic | 55.0% | |
| CAGCTCACCAGAACTCCCTA+TGG | + | chr7.1:3309827-3309846 | MS.gene050905:CDS | 55.0% | |
| CCACACACTCTACTCCGACA+TGG | + | chr7.1:3312599-3312618 | MS.gene050905:CDS | 55.0% | |
| CCATGTCGGAGTAGAGTGTG+TGG | - | chr7.1:3312602-3312621 | None:intergenic | 55.0% | |
| CCGTCTTCCATAGGGAGTTC+TGG | - | chr7.1:3309837-3309856 | None:intergenic | 55.0% | |
| CCGTTGGAGAAAAGGGGACA+AGG | - | chr7.1:3309497-3309516 | None:intergenic | 55.0% | |
| CCTCCTCGTCACCGGAAATT+GGG | + | chr7.1:3309528-3309547 | MS.gene050905:CDS | 55.0% | |
| CCTGTTCGAACCGGTGAGTT+CGG | - | chr7.1:3309559-3309578 | None:intergenic | 55.0% | |
| GCAAAGACACCGACACACTG+TGG | - | chr7.1:3310541-3310560 | None:intergenic | 55.0% | |
| GCATTACATCGGGGATTGGG+AGG | - | chr7.1:3312644-3312663 | None:intergenic | 55.0% | |
| GGAGGAGAATCGGTAACCGT+TGG | - | chr7.1:3309513-3309532 | None:intergenic | 55.0% | |
| GGATCCTCTGCCTTAAGTGG+AGG | + | chr7.1:3310429-3310448 | MS.gene050905:intron | 55.0% | |
| GGATGAATCCGTGGCCATGT+CGG | - | chr7.1:3312616-3312635 | None:intergenic | 55.0% | |
| GGCGTTGTTGGAGAAGATGG+AGG | - | chr7.1:3311783-3311802 | None:intergenic | 55.0% | |
| GTCGGAGTAGAGTGTGTGGA+CGG | - | chr7.1:3312598-3312617 | None:intergenic | 55.0% | |
| TCCTCCTCGTCACCGGAAAT+TGG | + | chr7.1:3309527-3309546 | MS.gene050905:CDS | 55.0% | |
| ! | AAGTCGGAGGGAGTGGCTTT+TGG | - | chr7.1:3309393-3309412 | None:intergenic | 55.0% |
| ! | AGTCGGAGGGAGTGGCTTTT+GGG | - | chr7.1:3309392-3309411 | None:intergenic | 55.0% |
| ! | AGTTCCAAAACGGGCTCAGG+CGG | - | chr7.1:3309609-3309628 | None:intergenic | 55.0% |
| ! | CATAGGGAGTTCTGGTGAGC+TGG | - | chr7.1:3309829-3309848 | None:intergenic | 55.0% |
| ! | GACGAGTTTGGAACGAGGAG+TGG | - | chr7.1:3309433-3309452 | None:intergenic | 55.0% |
| ! | GCAAGTTCCAAAACGGGCTC+AGG | - | chr7.1:3309612-3309631 | None:intergenic | 55.0% |
| ! | GTCAAGAGCGCGATGAATGG+CGG | - | chr7.1:3309667-3309686 | None:intergenic | 55.0% |
| ! | TGAGGTATGGGGTGCTAGCT+AGG | - | chr7.1:3310900-3310919 | None:intergenic | 55.0% |
| !! | ACCTGGTGCCACCCAAGATT+TGG | - | chr7.1:3311300-3311319 | None:intergenic | 55.0% |
| !! | GGTGGGTTGGAGAAGATGGA+GGG | + | chr7.1:3312262-3312281 | MS.gene050905:intron | 55.0% |
| !! | TGGTGCCACCCAAGATTTGG+TGG | - | chr7.1:3311297-3311316 | None:intergenic | 55.0% |
| !! | TGGTGGGTTGGAGAAGATGG+AGG | + | chr7.1:3312261-3312280 | MS.gene050905:intron | 55.0% |
| !! | TTGAGTTGGCGTGCTACGAC+GGG | - | chr7.1:3309459-3309478 | None:intergenic | 55.0% |
| AGTGTGTGGACGGTGACGAG+TGG | - | chr7.1:3312588-3312607 | None:intergenic | 60.0% | |
| CATGAGACGGGGAGTGATGG+AGG | + | chr7.1:3310602-3310621 | MS.gene050905:intron | 60.0% | |
| CCCAATTTCCGGTGACGAGG+AGG | - | chr7.1:3309531-3309550 | None:intergenic | 60.0% | |
| CCGATTCTCCTCCTCGTCAC+CGG | + | chr7.1:3309520-3309539 | MS.gene050905:CDS | 60.0% | |
| CCGGTGACGAGGAGGAGAAT+CGG | - | chr7.1:3309523-3309542 | None:intergenic | 60.0% | |
| CTCGTCACCGGAAATTGGGC+CGG | + | chr7.1:3309532-3309551 | MS.gene050905:CDS | 60.0% | |
| GGACATGAGACGGGGAGTGA+TGG | + | chr7.1:3310599-3310618 | MS.gene050905:intron | 60.0% | |
| GTGACGAGTGGTCTTTGCGG+CGG | - | chr7.1:3312576-3312595 | None:intergenic | 60.0% | |
| GTTCGGTCCGGCCCAATTTC+CGG | - | chr7.1:3309542-3309561 | None:intergenic | 60.0% | |
| TACATCGGGGATTGGGAGGG+TGG | - | chr7.1:3312640-3312659 | None:intergenic | 60.0% | |
| TCGAACCGGTGAGTTCGGTC+CGG | - | chr7.1:3309554-3309573 | None:intergenic | 60.0% | |
| TGGCAGGTACCCGATGTGGA+AGG | + | chr7.1:3309785-3309804 | MS.gene050905:intron | 60.0% | |
| ! | GAGTTCTGGTGAGCTGGCAC+CGG | - | chr7.1:3309823-3309842 | None:intergenic | 60.0% |
| ! | GGGGTCAAGAGCGCGATGAA+TGG | - | chr7.1:3309670-3309689 | None:intergenic | 60.0% |
| !! | CCGAACTCACCGGTTCGAAC+AGG | + | chr7.1:3309556-3309575 | MS.gene050905:CDS | 60.0% |
| !! | CGCCTCGCTGTTGATTCTGG+TGG | + | chr7.1:3309633-3309652 | MS.gene050905:CDS | 60.0% |
| !! | GAGGGTGGTGGATGAATCCG+TGG | - | chr7.1:3312625-3312644 | None:intergenic | 60.0% |
| !! | GCTCGCCTCGCTGTTGATTC+TGG | + | chr7.1:3309630-3309649 | MS.gene050905:CDS | 60.0% |
| ACGAGTGGTCTTTGCGGCGG+CGG | - | chr7.1:3312573-3312592 | None:intergenic | 65.0% | |
| AGAGCGCGATGAATGGCGGC+AGG | - | chr7.1:3309663-3309682 | None:intergenic | 65.0% | |
| ATCGGGGATTGGGAGGGTGG+TGG | - | chr7.1:3312637-3312656 | None:intergenic | 65.0% | |
| CGGCCCAATTTCCGGTGACG+AGG | - | chr7.1:3309534-3309553 | None:intergenic | 65.0% | |
| GAGCGCGATGAATGGCGGCA+GGG | - | chr7.1:3309662-3309681 | None:intergenic | 65.0% | |
| TTGGGCCGGACCGAACTCAC+CGG | + | chr7.1:3309546-3309565 | MS.gene050905:CDS | 65.0% | |
| AGTGGTCTTTGCGGCGGCGG+CGG | - | chr7.1:3312570-3312589 | None:intergenic | 70.0% | |
| CCAGCAACCCCCCTGCCACA+AGG | + | chr7.1:3310698-3310717 | MS.gene050905:intron | 70.0% | |
| CCTTGTGGCAGGGGGGTTGC+TGG | - | chr7.1:3310701-3310720 | None:intergenic | 70.0% | |
| ! | GACGGGGAGTGATGGAGGCC+TGG | + | chr7.1:3310607-3310626 | MS.gene050905:intron | 70.0% |
| ! | GTGGCCGCCTGAGCCCGTTT+TGG | + | chr7.1:3309602-3309621 | MS.gene050905:CDS | 70.0% |
| TGCGGCGGCGGCGGAACAGA+AGG | - | chr7.1:3312561-3312580 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 3309273 | 3312734 | 3309273 | ID=MS.gene050905 |
| chr7.1 | mRNA | 3309273 | 3312734 | 3309273 | ID=MS.gene050905.t1;Parent=MS.gene050905 |
| chr7.1 | exon | 3309273 | 3309701 | 3309273 | ID=MS.gene050905.t1.exon1;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3309273 | 3309701 | 3309273 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3309791 | 3309868 | 3309791 | ID=MS.gene050905.t1.exon2;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3309791 | 3309868 | 3309791 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3309956 | 3310098 | 3309956 | ID=MS.gene050905.t1.exon3;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3309956 | 3310098 | 3309956 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3310184 | 3310254 | 3310184 | ID=MS.gene050905.t1.exon4;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3310184 | 3310254 | 3310184 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3311222 | 3311317 | 3311222 | ID=MS.gene050905.t1.exon5;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3311222 | 3311317 | 3311222 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3312124 | 3312209 | 3312124 | ID=MS.gene050905.t1.exon6;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3312124 | 3312209 | 3312124 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| chr7.1 | exon | 3312546 | 3312734 | 3312546 | ID=MS.gene050905.t1.exon7;Parent=MS.gene050905.t1 |
| chr7.1 | CDS | 3312546 | 3312734 | 3312546 | ID=cds.MS.gene050905.t1;Parent=MS.gene050905.t1 |
| Gene Sequence |
| Protein sequence |
