Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64340.t1 | XP_003615684.2 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 8.90E-254 | 885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64340.t1 | Q8GV43 | 53.3 | 546 | 175 | 5 | 25 | 526 | 90 | 599 | 3.6e-163 | 576.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64340.t1 | G7KE98 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 6.4e-254 | 885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054999 | MS.gene64340 | 0.803006 | 4.28E-49 | -1.69E-46 |
| MS.gene055134 | MS.gene64340 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene055251 | MS.gene64340 | 0.84465 | 6.63E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene64340 | -0.807752 | 4.33E-50 | -1.69E-46 |
| MS.gene056266 | MS.gene64340 | -0.827231 | 1.75E-54 | -1.69E-46 |
| MS.gene056526 | MS.gene64340 | 0.803155 | 3.99E-49 | -1.69E-46 |
| MS.gene06057 | MS.gene64340 | 0.802877 | 4.55E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64340.t1 | MTR_5g071010 | 83.803 | 568 | 24 | 4 | 1 | 526 | 39 | 580 | 0.0 | 926 |
| MS.gene64340.t1 | MTR_5g082620 | 52.890 | 571 | 189 | 9 | 1 | 526 | 40 | 575 | 0.0 | 582 |
| MS.gene64340.t1 | MTR_5g082590 | 50.609 | 575 | 193 | 8 | 1 | 526 | 36 | 568 | 0.0 | 556 |
| MS.gene64340.t1 | MTR_3g070720 | 51.754 | 570 | 196 | 8 | 1 | 526 | 45 | 579 | 0.0 | 550 |
| MS.gene64340.t1 | MTR_3g069280 | 53.143 | 525 | 173 | 7 | 47 | 526 | 62 | 558 | 0.0 | 528 |
| MS.gene64340.t1 | MTR_5g082580 | 44.330 | 582 | 234 | 8 | 1 | 526 | 46 | 593 | 8.89e-165 | 481 |
| MS.gene64340.t1 | MTR_3g070710 | 45.804 | 572 | 224 | 12 | 1 | 526 | 42 | 573 | 5.15e-159 | 465 |
| MS.gene64340.t1 | MTR_3g070560 | 43.881 | 572 | 237 | 10 | 1 | 526 | 41 | 574 | 4.73e-151 | 445 |
| MS.gene64340.t1 | MTR_5g071040 | 44.190 | 568 | 213 | 11 | 1 | 526 | 54 | 559 | 1.12e-144 | 428 |
| MS.gene64340.t1 | MTR_3g070720 | 48.361 | 488 | 173 | 8 | 1 | 444 | 45 | 497 | 1.46e-142 | 420 |
| MS.gene64340.t1 | MTR_3g070720 | 47.826 | 460 | 161 | 8 | 1 | 416 | 45 | 469 | 3.06e-124 | 373 |
| MS.gene64340.t1 | MTR_3g070560 | 41.743 | 436 | 174 | 7 | 135 | 526 | 2 | 401 | 5.18e-108 | 329 |
| MS.gene64340.t1 | MTR_3g070720 | 47.355 | 397 | 145 | 7 | 1 | 368 | 45 | 406 | 4.93e-100 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64340.t1 | AT2G40116 | 52.531 | 573 | 182 | 8 | 1 | 526 | 70 | 599 | 0.0 | 591 |
| MS.gene64340.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene64340.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene64340.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 24 | 545 | 0.0 | 552 |
| MS.gene64340.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene64340.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene64340.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene64340.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene64340.t1 | AT3G55940 | 50.963 | 571 | 193 | 9 | 1 | 525 | 40 | 569 | 0.0 | 528 |
| MS.gene64340.t1 | AT5G58700 | 55.090 | 501 | 150 | 7 | 70 | 525 | 4 | 474 | 0.0 | 522 |
| MS.gene64340.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene64340.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene64340.t1 | AT5G58670 | 42.281 | 570 | 222 | 8 | 1 | 526 | 39 | 545 | 5.82e-145 | 428 |
| MS.gene64340.t1 | AT4G38530 | 42.207 | 571 | 220 | 12 | 1 | 526 | 39 | 544 | 1.25e-138 | 412 |
| MS.gene64340.t1 | AT3G47290 | 37.500 | 560 | 238 | 11 | 3 | 526 | 34 | 517 | 6.60e-114 | 348 |
| MS.gene64340.t1 | AT3G47290 | 37.455 | 558 | 237 | 11 | 3 | 524 | 34 | 515 | 2.72e-112 | 345 |
| MS.gene64340.t1 | AT3G47220 | 37.611 | 561 | 235 | 15 | 3 | 526 | 35 | 517 | 1.16e-105 | 327 |
Find 98 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATGCCTTTATAAT+AGG | 0.127135 | 5.3:+33801753 | None:intergenic |
| GGATTGAATACCTCATTATT+TGG | 0.164810 | 5.3:+33799250 | None:intergenic |
| CTGCTCAGGTAATTTCTTAT+AGG | 0.203651 | 5.3:-33800533 | MS.gene64340:CDS |
| AACATCATCTTTGGTGGAAT+TGG | 0.217676 | 5.3:+33801698 | None:intergenic |
| AGAATTCTCTCTCACACTTT+TGG | 0.234698 | 5.3:+33800127 | None:intergenic |
| GCAAGTTCAGGCACAGTTAA+AGG | 0.267197 | 5.3:+33798333 | None:intergenic |
| CAAATGTTTGAAATCCATTA+AGG | 0.273167 | 5.3:-33800634 | MS.gene64340:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.273183 | 5.3:+33801826 | None:intergenic |
| AGCGAACGCATGTTCCTTAA+TGG | 0.273224 | 5.3:+33800620 | None:intergenic |
| TTCACTTCCAACTTCTCTTT+AGG | 0.284668 | 5.3:+33799229 | None:intergenic |
| TTGGAATTTAAGTACTCTTT+TGG | 0.290635 | 5.3:+33800146 | None:intergenic |
| ATCCTATACTTCAGTTCTTC+AGG | 0.310159 | 5.3:+33800188 | None:intergenic |
| CAAAGACAATAGAGGATAAC+TGG | 0.310479 | 5.3:-33798386 | MS.gene64340:CDS |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5.3:-33801828 | MS.gene64340:CDS |
| TATTCAATGCCTTTATAATA+GGG | 0.323811 | 5.3:+33801754 | None:intergenic |
| CAACCCTCCTATTAGATCTA+AGG | 0.337822 | 5.3:-33802886 | MS.gene64340:intron |
| ATAAAATTCGAGATAATTAC+AGG | 0.353684 | 5.3:+33800491 | None:intergenic |
| TTCTTCATTGTTACATCAGC+TGG | 0.355429 | 5.3:+33798411 | None:intergenic |
| ATAAACCTCCAGAGCTGTTC+CGG | 0.366121 | 5.3:+33803065 | None:intergenic |
| ATGAGGCAGGTTGGCATAGC+TGG | 0.369626 | 5.3:-33798438 | MS.gene64340:intron |
| TAAAACAAGAACATCATCTT+TGG | 0.382673 | 5.3:+33801689 | None:intergenic |
| ACATCATCTTTGGTGGAATT+GGG | 0.394799 | 5.3:+33801699 | None:intergenic |
| TGTGGGAGATGGATGGAGTA+TGG | 0.405885 | 5.3:-33799102 | MS.gene64340:CDS |
| TGTTCTAATTCAGGTTCATC+AGG | 0.406713 | 5.3:-33801868 | MS.gene64340:intron |
| CCTACATTCATAAGAAAGTC+TGG | 0.411811 | 5.3:+33799274 | None:intergenic |
| GAGTTGATTTCCAGTGAGAT+AGG | 0.412212 | 5.3:+33801797 | None:intergenic |
| GGATTCTGATGAAGATGAAT+GGG | 0.415064 | 5.3:-33800078 | MS.gene64340:CDS |
| TAGTGATATCCCTATTATAA+AGG | 0.415361 | 5.3:-33801763 | MS.gene64340:CDS |
| AGGGATATGGCAGAAATCTT+TGG | 0.418091 | 5.3:-33799348 | MS.gene64340:intron |
| AAACATTTGATCAAATCAAC+AGG | 0.419291 | 5.3:+33800648 | None:intergenic |
| GAGTTGTTGAGCTTGATATT+TGG | 0.429323 | 5.3:-33801722 | MS.gene64340:CDS |
| TACATTACCTTAGATCTAAT+AGG | 0.436253 | 5.3:+33802879 | None:intergenic |
| ACTACAAGCCACTGGTTGGC+TGG | 0.443070 | 5.3:-33799405 | MS.gene64340:CDS |
| ACATGACTCCGGAACAGCTC+TGG | 0.445811 | 5.3:-33803073 | MS.gene64340:CDS |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5.3:+33801827 | None:intergenic |
| AAGAGTTATTATGACTGGAT+AGG | 0.447144 | 5.3:+33800590 | None:intergenic |
| GCTTCCTTCAAACTACCCTT+AGG | 0.448231 | 5.3:+33799656 | None:intergenic |
| CCAGACTTTCTTATGAATGT+AGG | 0.454137 | 5.3:-33799274 | MS.gene64340:CDS |
| ATTCAATCCTAAAGAGAAGT+TGG | 0.456474 | 5.3:-33799236 | MS.gene64340:CDS |
| CCTTCAAGCAAAAGCTGCTC+AGG | 0.456718 | 5.3:-33800547 | MS.gene64340:CDS |
| GAGAGAGGTTGATGATGAGA+AGG | 0.459589 | 5.3:-33803030 | MS.gene64340:CDS |
| AGGATTCTGATGAAGATGAA+TGG | 0.465159 | 5.3:-33800079 | MS.gene64340:CDS |
| TACACAAAATGAAGATGATA+AGG | 0.467374 | 5.3:-33800030 | MS.gene64340:intron |
| AGGATAACTGGATACCTACT+TGG | 0.472804 | 5.3:-33798374 | MS.gene64340:CDS |
| CTTGAAGGTCTGAGGTAAGA+TGG | 0.476823 | 5.3:+33800562 | None:intergenic |
| GAGGTTGATGATGAGAAGGA+TGG | 0.479346 | 5.3:-33803026 | MS.gene64340:CDS |
| CGAGGTGACACGTGTACCCT+TGG | 0.479526 | 5.3:+33799432 | None:intergenic |
| CATCGAATGTTTAGATCCAA+TGG | 0.482284 | 5.3:-33799319 | MS.gene64340:CDS |
| GGAAGTGAAGAAGACTCTTA+AGG | 0.485765 | 5.3:-33799215 | MS.gene64340:intron |
| GTGAATTCTTCTTCCCAAGT+AGG | 0.486822 | 5.3:+33798360 | None:intergenic |
| AGAGTTATTATGACTGGATA+GGG | 0.489103 | 5.3:+33800591 | None:intergenic |
| AAAACCTAAGGGTAGTTTGA+AGG | 0.497454 | 5.3:-33799660 | MS.gene64340:CDS |
| TCTTCAAGAGTTATTATGAC+TGG | 0.499791 | 5.3:+33800585 | None:intergenic |
| ATTATAAAGGCATTGAATAG+AGG | 0.500119 | 5.3:-33801750 | MS.gene64340:CDS |
| ATCGAATGTTTAGATCCAAT+GGG | 0.505076 | 5.3:-33799318 | MS.gene64340:CDS |
| TGGATAGGTTAAAATATATG+TGG | 0.514224 | 5.3:-33799120 | MS.gene64340:intron |
| CACCTGAAGAACTGAAGTAT+AGG | 0.517294 | 5.3:-33800190 | MS.gene64340:CDS |
| GAAGAAAACAAAGACAATAG+AGG | 0.517311 | 5.3:-33798394 | MS.gene64340:CDS |
| GTTCCACTTTACAATCGAAA+AGG | 0.517940 | 5.3:-33798207 | MS.gene64340:CDS |
| GTATCCTCTTCGAGAACTAA+AGG | 0.519491 | 5.3:-33800457 | MS.gene64340:CDS |
| AACAAGAACATCATCTTTGG+TGG | 0.520787 | 5.3:+33801692 | None:intergenic |
| GGTCATAACTCCTATCTCAC+TGG | 0.522887 | 5.3:-33801807 | MS.gene64340:CDS |
| TACTTCAGTTCTTCAGGTGA+CGG | 0.528094 | 5.3:+33800194 | None:intergenic |
| ATTACCTTAGATCTAATAGG+AGG | 0.531527 | 5.3:+33802882 | None:intergenic |
| TGAACTTGCTTTGCTTAGAG+TGG | 0.533590 | 5.3:-33798319 | MS.gene64340:CDS |
| GTTAAAATATATGTGGGAGA+TGG | 0.540418 | 5.3:-33799113 | MS.gene64340:CDS |
| ACTCTAAGCAAAGCAAGTTC+AGG | 0.549966 | 5.3:+33798321 | None:intergenic |
| GGTTGAATTCAGCAGAGAAA+AGG | 0.550704 | 5.3:+33802904 | None:intergenic |
| TGGAGGAAGTGCTGCAGAAG+CGG | 0.552240 | 5.3:-33802983 | MS.gene64340:CDS |
| AAATATATGTGGGAGATGGA+TGG | 0.558373 | 5.3:-33799109 | MS.gene64340:CDS |
| GAGGTGACACGTGTACCCTT+GGG | 0.560335 | 5.3:+33799433 | None:intergenic |
| CCAATCACTGAACTAAAACA+AGG | 0.561367 | 5.3:-33798240 | MS.gene64340:CDS |
| TGATACACAGAAGGTGGTGG+AGG | 0.563976 | 5.3:-33803000 | MS.gene64340:CDS |
| GTTGCTGAAATCAAAATCAA+AGG | 0.564989 | 5.3:-33800099 | MS.gene64340:CDS |
| TATCGTGGAGGTTCAGAGAG+AGG | 0.571463 | 5.3:-33803045 | MS.gene64340:CDS |
| TGATGAAGATGAATGGGGAA+AGG | 0.584071 | 5.3:-33800072 | MS.gene64340:CDS |
| GAATGTAGGTCCAAATAATG+AGG | 0.588015 | 5.3:-33799260 | MS.gene64340:CDS |
| CTCGTCGAACTACAAGCCAC+TGG | 0.588860 | 5.3:-33799413 | MS.gene64340:CDS |
| TGGTGGGGCCCACATGACTC+CGG | 0.590939 | 5.3:-33803084 | None:intergenic |
| CAATCACTGAACTAAAACAA+GGG | 0.591710 | 5.3:-33798239 | MS.gene64340:CDS |
| TTACCTTAGATCTAATAGGA+GGG | 0.601825 | 5.3:+33802883 | None:intergenic |
| TTCAGGCACAGTTAAAGGAA+AGG | 0.610669 | 5.3:+33798338 | None:intergenic |
| AATTGATACACAGAAGGTGG+TGG | 0.611302 | 5.3:-33803003 | MS.gene64340:CDS |
| TATATGAAATAATGGGACAA+TGG | 0.614028 | 5.3:+33801834 | None:intergenic |
| TGACTCCGGAACAGCTCTGG+AGG | 0.614053 | 5.3:-33803070 | MS.gene64340:CDS |
| GATTCTGATGAAGATGAATG+GGG | 0.619806 | 5.3:-33800077 | MS.gene64340:CDS |
| CCAAGCATCCAGCCAACCAG+TGG | 0.621623 | 5.3:+33799397 | None:intergenic |
| GGATAGGTTAAAATATATGT+GGG | 0.623354 | 5.3:-33799119 | MS.gene64340:intron |
| GGATAACTGGATACCTACTT+GGG | 0.627164 | 5.3:-33798373 | MS.gene64340:CDS |
| TGGAATTGATACACAGAAGG+TGG | 0.632697 | 5.3:-33803006 | MS.gene64340:CDS |
| TCGAACTACAAGCCACTGGT+TGG | 0.635611 | 5.3:-33799409 | MS.gene64340:CDS |
| GGATGGAATTGATACACAGA+AGG | 0.635682 | 5.3:-33803009 | MS.gene64340:CDS |
| CACGCCTTTAGTTCTCGAAG+AGG | 0.638865 | 5.3:+33800453 | None:intergenic |
| GCTCTGGAGGTTTATCGTGG+AGG | 0.645693 | 5.3:-33803057 | MS.gene64340:CDS |
| ACAGCTCTGGAGGTTTATCG+TGG | 0.661181 | 5.3:-33803060 | MS.gene64340:CDS |
| CAGTGGCTTGTAGTTCGACG+AGG | 0.682847 | 5.3:+33799414 | None:intergenic |
| TCGAATGTTTAGATCCAATG+GGG | 0.693138 | 5.3:-33799317 | MS.gene64340:CDS |
| CGAATGTTTAGATCCAATGG+GGG | 0.716144 | 5.3:-33799316 | MS.gene64340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAATAATAAAAATT+TGG | + | chr5.3:33799770-33799789 | None:intergenic | 0.0% |
| !! | GTTTATAACTTATATAAAAA+CGG | + | chr5.3:33801337-33801356 | None:intergenic | 10.0% |
| !!! | TACAATTTGATTTTTTATAA+AGG | + | chr5.3:33800181-33800200 | None:intergenic | 10.0% |
| !!! | ATAAAACGTGTAAATTTTAT+AGG | - | chr5.3:33800889-33800908 | MS.gene64340:intron | 15.0% |
| !!! | TAAAACGTGTAAATTTTATA+GGG | - | chr5.3:33800890-33800909 | MS.gene64340:intron | 15.0% |
| !!! | TTGTTTAAATTTTCATCATT+TGG | + | chr5.3:33801054-33801073 | None:intergenic | 15.0% |
| !! | AAAATAAAGACTGTTTGAAT+TGG | + | chr5.3:33801459-33801478 | None:intergenic | 20.0% |
| !! | AATTCAAAGAAAAAGATTAC+TGG | + | chr5.3:33800516-33800535 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | + | chr5.3:33799448-33799467 | None:intergenic | 20.0% |
| !! | AGTAGATTATTTGTATACTT+AGG | + | chr5.3:33801720-33801739 | None:intergenic | 20.0% |
| !! | ATAAAATTCGAGATAATTAC+AGG | + | chr5.3:33800784-33800803 | None:intergenic | 20.0% |
| !! | ATTAACTTAACATCACTAAT+AGG | + | chr5.3:33799381-33799400 | None:intergenic | 20.0% |
| !! | ATTCTACATTCTAATTGTAA+TGG | - | chr5.3:33801766-33801785 | MS.gene64340:CDS | 20.0% |
| !! | CAAACATATGCATTAAATTA+AGG | + | chr5.3:33799288-33799307 | None:intergenic | 20.0% |
| !! | TAGATGATTACTTAAACATT+TGG | - | chr5.3:33801012-33801031 | MS.gene64340:intron | 20.0% |
| !! | TATTCAATGCCTTTATAATA+GGG | + | chr5.3:33799521-33799540 | None:intergenic | 20.0% |
| !! | TTAGAATGTAGAATAGTTTA+AGG | + | chr5.3:33801760-33801779 | None:intergenic | 20.0% |
| !! | TTGAAGCTTAAATAACTTTA+AGG | - | chr5.3:33802349-33802368 | MS.gene64340:intron | 20.0% |
| !!! | AATCATTTGTTATATCTGAA+AGG | - | chr5.3:33800928-33800947 | MS.gene64340:intron | 20.0% |
| !!! | AGTTTTGAAGTTAATATGAA+TGG | - | chr5.3:33799137-33799156 | MS.gene64340:intron | 20.0% |
| !!! | ATTATGTTGTTTTGATTCAA+TGG | - | chr5.3:33798430-33798449 | MS.gene64340:CDS | 20.0% |
| !!! | ATTATTGAATATTTTCTCTC+TGG | + | chr5.3:33798556-33798575 | None:intergenic | 20.0% |
| !!! | TGTATTTAATTTATTCTCAC+TGG | - | chr5.3:33802132-33802151 | MS.gene64340:intron | 20.0% |
| !!! | TTGGTATTTTTACTAGTTAT+TGG | - | chr5.3:33799229-33799248 | MS.gene64340:CDS | 20.0% |
| !!! | TTTATCTTCTTCAACTTTTA+AGG | + | chr5.3:33801641-33801660 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTATTTTCTTACA+GGG | - | chr5.3:33801478-33801497 | MS.gene64340:intron | 20.0% |
| !!! | TTTTCTTTCTATTTTCTTAC+AGG | - | chr5.3:33801477-33801496 | MS.gene64340:intron | 20.0% |
| ! | AAACATCTTATAACATGTTC+AGG | + | chr5.3:33801376-33801395 | None:intergenic | 25.0% |
| ! | AAACATTTGATCAAATCAAC+AGG | + | chr5.3:33800627-33800646 | None:intergenic | 25.0% |
| ! | AAAGTTATTTAAGCTTCAAG+TGG | + | chr5.3:33802348-33802367 | None:intergenic | 25.0% |
| ! | ACATTATCTTGTGAAAATAG+AGG | + | chr5.3:33801300-33801319 | None:intergenic | 25.0% |
| ! | AGGTCTATTTACAAGTTATT+TGG | - | chr5.3:33802439-33802458 | MS.gene64340:intron | 25.0% |
| ! | ATAAATTCACATGTAAGCTA+AGG | + | chr5.3:33802816-33802835 | None:intergenic | 25.0% |
| ! | CAAATTAAGTAAACTTGGAT+TGG | + | chr5.3:33799319-33799338 | None:intergenic | 25.0% |
| ! | CTATTCAATGCCTTTATAAT+AGG | + | chr5.3:33799522-33799541 | None:intergenic | 25.0% |
| ! | CTTTGAATTTACATATTTGC+TGG | - | chr5.3:33800527-33800546 | MS.gene64340:CDS | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | + | chr5.3:33799449-33799468 | None:intergenic | 25.0% |
| ! | GCAGTTATATTGTAAATCAA+AGG | + | chr5.3:33802278-33802297 | None:intergenic | 25.0% |
| ! | GGATAGGTTAAAATATATGT+GGG | - | chr5.3:33802153-33802172 | MS.gene64340:intron | 25.0% |
| ! | GTTAATTTCTGTTCTAATTC+AGG | - | chr5.3:33799395-33799414 | MS.gene64340:intron | 25.0% |
| ! | TAAAACAAGAACATCATCTT+TGG | + | chr5.3:33799586-33799605 | None:intergenic | 25.0% |
| ! | TAAATAGAAAAAACTTACCC+TGG | + | chr5.3:33802244-33802263 | None:intergenic | 25.0% |
| ! | TACACAAAATGAAGATGATA+AGG | - | chr5.3:33801242-33801261 | MS.gene64340:intron | 25.0% |
| ! | TACATTACCTTAGATCTAAT+AGG | + | chr5.3:33798396-33798415 | None:intergenic | 25.0% |
| ! | TACTAGTTATTGGATGAAAA+AGG | - | chr5.3:33799239-33799258 | MS.gene64340:CDS | 25.0% |
| ! | TAGAATAGTTTAAGGAAAAG+TGG | + | chr5.3:33801752-33801771 | None:intergenic | 25.0% |
| ! | TAGTGATATCCCTATTATAA+AGG | - | chr5.3:33799509-33799528 | MS.gene64340:intron | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | - | chr5.3:33799444-33799463 | MS.gene64340:CDS | 25.0% |
| ! | TGGATAGGTTAAAATATATG+TGG | - | chr5.3:33802152-33802171 | MS.gene64340:intron | 25.0% |
| ! | TTAATTTATTCTCACTGGAT+AGG | - | chr5.3:33802137-33802156 | MS.gene64340:intron | 25.0% |
| ! | TTCTGCAAATTAAGTAAACT+TGG | + | chr5.3:33799324-33799343 | None:intergenic | 25.0% |
| ! | TTGAAGTTAATATGAATGGA+AGG | - | chr5.3:33799141-33799160 | MS.gene64340:intron | 25.0% |
| !! | ATATCCTCAAAAAGTTTTTC+TGG | + | chr5.3:33801817-33801836 | None:intergenic | 25.0% |
| !! | ATTTTGTGTATGTACAACAT+CGG | + | chr5.3:33801232-33801251 | None:intergenic | 25.0% |
| !! | CAAATGTTTGAAATCCATTA+AGG | - | chr5.3:33800638-33800657 | MS.gene64340:CDS | 25.0% |
| !! | TATATGAAATAATGGGACAA+TGG | + | chr5.3:33799441-33799460 | None:intergenic | 25.0% |
| !! | TATCCTCAAAAAGTTTTTCT+GGG | + | chr5.3:33801816-33801835 | None:intergenic | 25.0% |
| !! | TGGTTTCTATTTTGTATGAT+AGG | - | chr5.3:33801786-33801805 | MS.gene64340:CDS | 25.0% |
| !! | TTGGAATTTAAGTACTCTTT+TGG | + | chr5.3:33801129-33801148 | None:intergenic | 25.0% |
| !!! | AACAAAGTGTTTTCAAATAG+AGG | - | chr5.3:33798990-33799009 | MS.gene64340:intron | 25.0% |
| !!! | ACACTTTTAAGAAGTACATT+AGG | + | chr5.3:33798831-33798850 | None:intergenic | 25.0% |
| !!! | ATTATAAAGGCATTGAATAG+AGG | - | chr5.3:33799522-33799541 | MS.gene64340:intron | 25.0% |
| !!! | CACTTTTAAGAAGTACATTA+GGG | + | chr5.3:33798830-33798849 | None:intergenic | 25.0% |
| !!! | CTTCAAAACTGCTTTAAAAA+GGG | + | chr5.3:33799919-33799938 | None:intergenic | 25.0% |
| !!! | TCTTCAAAACTGCTTTAAAA+AGG | + | chr5.3:33799920-33799939 | None:intergenic | 25.0% |
| !!! | TGAAAAAGGCAAGTTTTTTT+AGG | - | chr5.3:33799253-33799272 | MS.gene64340:CDS | 25.0% |
| !!! | TTTCTAGAGTACATTTGTTA+AGG | - | chr5.3:33802419-33802438 | MS.gene64340:intron | 25.0% |
| AAACTGAACTGAACAATGAA+TGG | - | chr5.3:33800083-33800102 | MS.gene64340:CDS | 30.0% | |
| AACAAATTTCTCTTCTGCTT+TGG | - | chr5.3:33799991-33800010 | MS.gene64340:intron | 30.0% | |
| AACTTGTAGAGACATAAAAG+TGG | - | chr5.3:33800851-33800870 | MS.gene64340:intron | 30.0% | |
| AAGAGTTATTATGACTGGAT+AGG | + | chr5.3:33800685-33800704 | None:intergenic | 30.0% | |
| AAGTTAATATGAATGGAAGG+TGG | - | chr5.3:33799144-33799163 | MS.gene64340:intron | 30.0% | |
| AATAGTTTAAGGAAAAGTGG+AGG | + | chr5.3:33801749-33801768 | None:intergenic | 30.0% | |
| AGAGTTATTATGACTGGATA+GGG | + | chr5.3:33800684-33800703 | None:intergenic | 30.0% | |
| AGCTTACATGTGAATTTATG+AGG | - | chr5.3:33802817-33802836 | MS.gene64340:intron | 30.0% | |
| AGTTAATATGAATGGAAGGT+GGG | - | chr5.3:33799145-33799164 | MS.gene64340:intron | 30.0% | |
| ATCGAATGTTTAGATCCAAT+GGG | - | chr5.3:33801954-33801973 | MS.gene64340:intron | 30.0% | |
| ATTACCTTAGATCTAATAGG+AGG | + | chr5.3:33798393-33798412 | None:intergenic | 30.0% | |
| ATTCAATCCTAAAGAGAAGT+TGG | - | chr5.3:33802036-33802055 | MS.gene64340:intron | 30.0% | |
| ATTCATGCTGAAAAACCTAA+GGG | - | chr5.3:33801601-33801620 | MS.gene64340:intron | 30.0% | |
| CAATCACTGAACTAAAACAA+GGG | - | chr5.3:33803033-33803052 | MS.gene64340:CDS | 30.0% | |
| GAAGAAAACAAAGACAATAG+AGG | - | chr5.3:33802878-33802897 | MS.gene64340:intron | 30.0% | |
| GGATTGAATACCTCATTATT+TGG | + | chr5.3:33802025-33802044 | None:intergenic | 30.0% | |
| GTTAAAATATATGTGGGAGA+TGG | - | chr5.3:33802159-33802178 | MS.gene64340:intron | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr5.3:33799817-33799836 | None:intergenic | 30.0% | |
| GTTGCTGAAATCAAAATCAA+AGG | - | chr5.3:33801173-33801192 | MS.gene64340:intron | 30.0% | |
| TATTCATGCTGAAAAACCTA+AGG | - | chr5.3:33801600-33801619 | MS.gene64340:intron | 30.0% | |
| TCTTCAAGAGTTATTATGAC+TGG | + | chr5.3:33800690-33800709 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr5.3:33799821-33799840 | MS.gene64340:intron | 30.0% | |
| TTACCTTAGATCTAATAGGA+GGG | + | chr5.3:33798392-33798411 | None:intergenic | 30.0% | |
| TTCAAAACAGTGTTCTCAAT+CGG | + | chr5.3:33799080-33799099 | None:intergenic | 30.0% | |
| TTCAAATTTCACTTCACTAC+AGG | + | chr5.3:33798926-33798945 | None:intergenic | 30.0% | |
| TTCACAAAGGAAAAACAGTT+CGG | + | chr5.3:33800233-33800252 | None:intergenic | 30.0% | |
| ! | GAATTTAAGTACTCTTTTGG+AGG | + | chr5.3:33801126-33801145 | None:intergenic | 30.0% |
| ! | GATACGTAAACTTAGGTTTT+TGG | + | chr5.3:33802530-33802549 | None:intergenic | 30.0% |
| ! | GATCTTGTGTTTTCTTTGAT+TGG | - | chr5.3:33799210-33799229 | MS.gene64340:intron | 30.0% |
| ! | TTTTATAGAGGTCAATGAGT+TGG | - | chr5.3:33799789-33799808 | MS.gene64340:intron | 30.0% |
| ! | TTTTCGATTGTAAAGTGGAA+CGG | + | chr5.3:33803066-33803085 | None:intergenic | 30.0% |
| !! | CGATTTTGATACGTAAACTT+AGG | + | chr5.3:33802537-33802556 | None:intergenic | 30.0% |
| !! | TATTGCGCAATAACTGATTT+TGG | - | chr5.3:33800292-33800311 | MS.gene64340:intron | 30.0% |
| !! | TGATTCAATGGTTTGACTTT+TGG | - | chr5.3:33798442-33798461 | MS.gene64340:intron | 30.0% |
| !! | TTTTTGAGGATATATCCCAA+GGG | - | chr5.3:33801824-33801843 | MS.gene64340:CDS | 30.0% |
| !!! | AATTAGTTTTCTGTGTATCG+TGG | + | chr5.3:33798964-33798983 | None:intergenic | 30.0% |
| !!! | ATGTTCTTGTTTTACATGGA+AGG | - | chr5.3:33799592-33799611 | MS.gene64340:intron | 30.0% |
| !!! | CAATTTGGTTTTGTTCAGTT+CGG | + | chr5.3:33800353-33800372 | None:intergenic | 30.0% |
| !!! | CTCAGGTTCACAATTTTTTT+TGG | - | chr5.3:33800960-33800979 | MS.gene64340:intron | 30.0% |
| !!! | GATGATGTTCTTGTTTTACA+TGG | - | chr5.3:33799588-33799607 | MS.gene64340:intron | 30.0% |
| !!! | TCTTTGTTTTCAAACAGAAC+TGG | - | chr5.3:33800150-33800169 | MS.gene64340:CDS | 30.0% |
| AAAAAGATTACTGGCACAGT+AGG | + | chr5.3:33800507-33800526 | None:intergenic | 35.0% | |
| AAAACCTAAGGGTAGTTTGA+AGG | - | chr5.3:33801612-33801631 | MS.gene64340:intron | 35.0% | |
| AAATATATGTGGGAGATGGA+TGG | - | chr5.3:33802163-33802182 | MS.gene64340:intron | 35.0% | |
| AACAAGAACATCATCTTTGG+TGG | + | chr5.3:33799583-33799602 | None:intergenic | 35.0% | |
| AACAGAACCGTTAAACTGAA+TGG | + | chr5.3:33800464-33800483 | None:intergenic | 35.0% | |
| AACAGTTTAACCACTTCCTT+TGG | - | chr5.3:33802680-33802699 | MS.gene64340:intron | 35.0% | |
| AACATCATCTTTGGTGGAAT+TGG | + | chr5.3:33799577-33799596 | None:intergenic | 35.0% | |
| AATGGTTGCATTCAATATGC+AGG | - | chr5.3:33801904-33801923 | MS.gene64340:intron | 35.0% | |
| ACATCATCTTTGGTGGAATT+GGG | + | chr5.3:33799576-33799595 | None:intergenic | 35.0% | |
| ACTACCATGAACTTCTACTT+AGG | + | chr5.3:33798626-33798645 | None:intergenic | 35.0% | |
| AGACTGTTTGAAAGAGCTTT+CGG | + | chr5.3:33801399-33801418 | None:intergenic | 35.0% | |
| AGGATTCATCATAACCAATC+GGG | - | chr5.3:33802584-33802603 | MS.gene64340:intron | 35.0% | |
| AGGATTCTGATGAAGATGAA+TGG | - | chr5.3:33801193-33801212 | MS.gene64340:intron | 35.0% | |
| ATCCTATACTTCAGTTCTTC+AGG | + | chr5.3:33801087-33801106 | None:intergenic | 35.0% | |
| ATGGTTGCATTCAATATGCA+GGG | - | chr5.3:33801905-33801924 | MS.gene64340:intron | 35.0% | |
| CAAAGACAATAGAGGATAAC+TGG | - | chr5.3:33802886-33802905 | MS.gene64340:intron | 35.0% | |
| CACGAGTGACATTTCAAAAA+AGG | - | chr5.3:33799112-33799131 | MS.gene64340:CDS | 35.0% | |
| CAGGATTCATCATAACCAAT+CGG | - | chr5.3:33802583-33802602 | MS.gene64340:intron | 35.0% | |
| CATCGAATGTTTAGATCCAA+TGG | - | chr5.3:33801953-33801972 | MS.gene64340:intron | 35.0% | |
| CCAATCACTGAACTAAAACA+AGG | - | chr5.3:33803032-33803051 | MS.gene64340:CDS | 35.0% | |
| CCAGACTTTCTTATGAATGT+AGG | - | chr5.3:33801998-33802017 | MS.gene64340:intron | 35.0% | |
| CCTACATTCATAAGAAAGTC+TGG | + | chr5.3:33802001-33802020 | None:intergenic | 35.0% | |
| CGTATCAAAATCGAGTTAAC+AGG | - | chr5.3:33802544-33802563 | MS.gene64340:intron | 35.0% | |
| CTGATCAACACATTGCAAAA+TGG | - | chr5.3:33799629-33799648 | MS.gene64340:intron | 35.0% | |
| CTGCTCAGGTAATTTCTTAT+AGG | - | chr5.3:33800739-33800758 | MS.gene64340:intron | 35.0% | |
| GAATGTAGGTCCAAATAATG+AGG | - | chr5.3:33802012-33802031 | MS.gene64340:intron | 35.0% | |
| GAGTTGTTGAGCTTGATATT+TGG | - | chr5.3:33799550-33799569 | MS.gene64340:intron | 35.0% | |
| GATTCTGATGAAGATGAATG+GGG | - | chr5.3:33801195-33801214 | MS.gene64340:intron | 35.0% | |
| GGATTCTGATGAAGATGAAT+GGG | - | chr5.3:33801194-33801213 | MS.gene64340:intron | 35.0% | |
| GTTCAATTCAGTCCATGAAT+TGG | + | chr5.3:33800381-33800400 | None:intergenic | 35.0% | |
| GTTCCACTTTACAATCGAAA+AGG | - | chr5.3:33803065-33803084 | MS.gene64340:CDS | 35.0% | |
| TACATGTGAATTTATGAGGC+AGG | - | chr5.3:33802821-33802840 | MS.gene64340:intron | 35.0% | |
| TCAAAACAGTGTTCTCAATC+GGG | + | chr5.3:33799079-33799098 | None:intergenic | 35.0% | |
| TCGAATGTTTAGATCCAATG+GGG | - | chr5.3:33801955-33801974 | MS.gene64340:intron | 35.0% | |
| TCTTCAAAACTATCTTCACC+TGG | + | chr5.3:33799184-33799203 | None:intergenic | 35.0% | |
| TCTTCCTAAGTAGAAGTTCA+TGG | - | chr5.3:33798619-33798638 | MS.gene64340:intron | 35.0% | |
| TTCACTTCCAACTTCTCTTT+AGG | + | chr5.3:33802046-33802065 | None:intergenic | 35.0% | |
| TTCTTCATTGTTACATCAGC+TGG | + | chr5.3:33802864-33802883 | None:intergenic | 35.0% | |
| TTGAAGAAGATAAAGTGAGC+CGG | - | chr5.3:33801647-33801666 | MS.gene64340:intron | 35.0% | |
| TTTATAGTAGTGCAACGTAG+CGG | - | chr5.3:33799023-33799042 | MS.gene64340:intron | 35.0% | |
| ! | AAAAGGTGCAAGATTCACAA+AGG | + | chr5.3:33800246-33800265 | None:intergenic | 35.0% |
| ! | AATTTCCCTTTTTGTCCCTT+CGG | - | chr5.3:33799661-33799680 | MS.gene64340:CDS | 35.0% |
| ! | AGAATTCTCTCTCACACTTT+TGG | + | chr5.3:33801148-33801167 | None:intergenic | 35.0% |
| ! | ATCTCATTTTGAATCCCGAT+TGG | + | chr5.3:33802601-33802620 | None:intergenic | 35.0% |
| ! | ATGTCATTGTCCTTGCTATA+AGG | - | chr5.3:33798794-33798813 | MS.gene64340:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr5.3:33799801-33799820 | MS.gene64340:intron | 35.0% |
| ! | TATGTTTCTGTCTCAAGTGT+TGG | - | chr5.3:33798479-33798498 | MS.gene64340:intron | 35.0% |
| ! | TCACCCAGAAAAACTTTTTG+AGG | - | chr5.3:33801810-33801829 | MS.gene64340:CDS | 35.0% |
| ! | TCTCCTTTTCGATTGTAAAG+TGG | + | chr5.3:33803071-33803090 | None:intergenic | 35.0% |
| ! | TGTTCTAATTCAGGTTCATC+AGG | - | chr5.3:33799404-33799423 | MS.gene64340:CDS | 35.0% |
| !! | CTATTTCTGTAATCGTCCAA+AGG | + | chr5.3:33802699-33802718 | None:intergenic | 35.0% |
| !! | CTTTTTGAGGATATATCCCA+AGG | - | chr5.3:33801823-33801842 | MS.gene64340:CDS | 35.0% |
| !! | GTCTCAAGTGTTGGATTAAT+TGG | - | chr5.3:33798513-33798532 | MS.gene64340:intron | 35.0% |
| !! | GTTTTAGCGAACAGTTTTAG+TGG | + | chr5.3:33800067-33800086 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTAGTTCAGTGAT+TGG | + | chr5.3:33803035-33803054 | None:intergenic | 35.0% |
| AATTGATACACAGAAGGTGG+TGG | - | chr5.3:33798269-33798288 | MS.gene64340:CDS | 40.0% | |
| ACTCTAAGCAAAGCAAGTTC+AGG | + | chr5.3:33802954-33802973 | None:intergenic | 40.0% | |
| AGCAAAGAACCGAACTATGA+CGG | + | chr5.3:33800433-33800452 | None:intergenic | 40.0% | |
| AGGATAACTGGATACCTACT+TGG | - | chr5.3:33802898-33802917 | MS.gene64340:CDS | 40.0% | |
| AGGGATATGGCAGAAATCTT+TGG | - | chr5.3:33801924-33801943 | MS.gene64340:intron | 40.0% | |
| ATGGAAGTGGTATATGGGTT+TGG | - | chr5.3:33800118-33800137 | MS.gene64340:CDS | 40.0% | |
| CAAAACAGTGTTCTCAATCG+GGG | + | chr5.3:33799078-33799097 | None:intergenic | 40.0% | |
| CAAATTGTGACGCCAATTCA+TGG | - | chr5.3:33800366-33800385 | MS.gene64340:intron | 40.0% | |
| CAACCCTCCTATTAGATCTA+AGG | - | chr5.3:33798386-33798405 | MS.gene64340:CDS | 40.0% | |
| CACCTGAAGAACTGAAGTAT+AGG | - | chr5.3:33801082-33801101 | MS.gene64340:intron | 40.0% | |
| CATGAATTGGCGTCACAATT+TGG | + | chr5.3:33800368-33800387 | None:intergenic | 40.0% | |
| CCAGAATGGAAGTGGTATAT+GGG | - | chr5.3:33800113-33800132 | MS.gene64340:CDS | 40.0% | |
| CGAATGTTTAGATCCAATGG+GGG | - | chr5.3:33801956-33801975 | MS.gene64340:intron | 40.0% | |
| CGATACAGAGAAGATTAGCA+TGG | - | chr5.3:33799705-33799724 | MS.gene64340:CDS | 40.0% | |
| CGGTACACAAAGATACAGTT+CGG | + | chr5.3:33800213-33800232 | None:intergenic | 40.0% | |
| CGTAATTGTCCGTCATAGTT+CGG | - | chr5.3:33800421-33800440 | MS.gene64340:intron | 40.0% | |
| CTTACCCTGGCATAAAAATC+TGG | + | chr5.3:33802231-33802250 | None:intergenic | 40.0% | |
| GAACTTCTACTTAGGAAGAG+TGG | + | chr5.3:33798618-33798637 | None:intergenic | 40.0% | |
| GCATTCAATATGCAGGGATA+TGG | - | chr5.3:33801911-33801930 | MS.gene64340:intron | 40.0% | |
| GGAAGTGAAGAAGACTCTTA+AGG | - | chr5.3:33802057-33802076 | MS.gene64340:intron | 40.0% | |
| GGATAACTGGATACCTACTT+GGG | - | chr5.3:33802899-33802918 | MS.gene64340:CDS | 40.0% | |
| GGATGGAATTGATACACAGA+AGG | - | chr5.3:33798263-33798282 | MS.gene64340:CDS | 40.0% | |
| GGTTGAATTCAGCAGAGAAA+AGG | + | chr5.3:33798371-33798390 | None:intergenic | 40.0% | |
| GTATCCTCTTCGAGAACTAA+AGG | - | chr5.3:33800815-33800834 | MS.gene64340:intron | 40.0% | |
| GTGAATTCTTCTTCCCAAGT+AGG | + | chr5.3:33802915-33802934 | None:intergenic | 40.0% | |
| TACTTCAGTTCTTCAGGTGA+CGG | + | chr5.3:33801081-33801100 | None:intergenic | 40.0% | |
| TAGTTCGGTTCTTTGCTTTG+CGG | - | chr5.3:33800436-33800455 | MS.gene64340:intron | 40.0% | |
| TCCAGAATGGAAGTGGTATA+TGG | - | chr5.3:33800112-33800131 | MS.gene64340:CDS | 40.0% | |
| TCGGGGACATCTGATAAAAT+TGG | - | chr5.3:33799680-33799699 | MS.gene64340:CDS | 40.0% | |
| TGAACTTGTCCAGTTCGAAA+AGG | + | chr5.3:33800263-33800282 | None:intergenic | 40.0% | |
| TGAAGAAGACTCTTAAGGTG+AGG | - | chr5.3:33802062-33802081 | MS.gene64340:intron | 40.0% | |
| TGAATGGTATACGTCCAGAA+TGG | - | chr5.3:33800099-33800118 | MS.gene64340:CDS | 40.0% | |
| TGATGAAGATGAATGGGGAA+AGG | - | chr5.3:33801200-33801219 | MS.gene64340:intron | 40.0% | |
| TGGAATTGATACACAGAAGG+TGG | - | chr5.3:33798266-33798285 | MS.gene64340:CDS | 40.0% | |
| TGTCAATGTCCTACATTCAC+AGG | + | chr5.3:33800601-33800620 | None:intergenic | 40.0% | |
| TGTGAATTTATGAGGCAGGT+TGG | - | chr5.3:33802825-33802844 | MS.gene64340:intron | 40.0% | |
| TTCAGGCACAGTTAAAGGAA+AGG | + | chr5.3:33802937-33802956 | None:intergenic | 40.0% | |
| TTCGTAAACCGAACCATGAA+CGG | + | chr5.3:33800018-33800037 | None:intergenic | 40.0% | |
| TTTCGAACTGGACAAGTTCA+AGG | - | chr5.3:33800263-33800282 | MS.gene64340:intron | 40.0% | |
| ! | AATCTTGCACCTTTTCGAAC+TGG | - | chr5.3:33800251-33800270 | MS.gene64340:intron | 40.0% |
| ! | ATTTCCCTTTTTGTCCCTTC+GGG | - | chr5.3:33799662-33799681 | MS.gene64340:CDS | 40.0% |
| ! | ATTTTATCAGATGTCCCCGA+AGG | + | chr5.3:33799680-33799699 | None:intergenic | 40.0% |
| ! | CTGAAAGGTGTAAATCACTC+AGG | - | chr5.3:33800943-33800962 | MS.gene64340:intron | 40.0% |
| ! | GAGTTGATTTCCAGTGAGAT+AGG | + | chr5.3:33799478-33799497 | None:intergenic | 40.0% |
| ! | TCCACCAGATTTTTATGCCA+GGG | - | chr5.3:33802224-33802243 | MS.gene64340:intron | 40.0% |
| ! | TGAACTTGCTTTGCTTAGAG+TGG | - | chr5.3:33802953-33802972 | MS.gene64340:CDS | 40.0% |
| ! | TTGTGTTGACCTGTGAATGT+AGG | - | chr5.3:33800589-33800608 | MS.gene64340:CDS | 40.0% |
| ! | TTTTATCAGATGTCCCCGAA+GGG | + | chr5.3:33799679-33799698 | None:intergenic | 40.0% |
| !! | TCTGAGACAGATGATTTTGC+AGG | - | chr5.3:33802996-33803015 | MS.gene64340:CDS | 40.0% |
| ACCCTGGCATAAAAATCTGG+TGG | + | chr5.3:33802228-33802247 | None:intergenic | 45.0% | |
| AGCGAACGCATGTTCCTTAA+TGG | + | chr5.3:33800655-33800674 | None:intergenic | 45.0% | |
| ATAAACCTCCAGAGCTGTTC+CGG | + | chr5.3:33798210-33798229 | None:intergenic | 45.0% | |
| CCCATATACCACTTCCATTC+TGG | + | chr5.3:33800116-33800135 | None:intergenic | 45.0% | |
| CTGTAATCGTCCAAAGGAAG+TGG | + | chr5.3:33802693-33802712 | None:intergenic | 45.0% | |
| GACACGCACAAATCGAGAAA+TGG | - | chr5.3:33799743-33799762 | MS.gene64340:CDS | 45.0% | |
| GCAAGTTCAGGCACAGTTAA+AGG | + | chr5.3:33802942-33802961 | None:intergenic | 45.0% | |
| GCTTCCTTCAAACTACCCTT+AGG | + | chr5.3:33801619-33801638 | None:intergenic | 45.0% | |
| GGTCATAACTCCTATCTCAC+TGG | - | chr5.3:33799465-33799484 | MS.gene64340:intron | 45.0% | |
| GTATACGTCCAGAATGGAAG+TGG | - | chr5.3:33800105-33800124 | MS.gene64340:CDS | 45.0% | |
| GTTGACCCAATCAACTGAGT+CGG | - | chr5.3:33798674-33798693 | MS.gene64340:intron | 45.0% | |
| TGCGGCTCCATTCAGTTTAA+CGG | - | chr5.3:33800454-33800473 | MS.gene64340:CDS | 45.0% | |
| TTTAGATCCAATGGGGGATG+TGG | - | chr5.3:33801962-33801981 | MS.gene64340:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr5.3:33799870-33799889 | None:intergenic | 45.0% |
| ! | AGCATGTGTTGACCATTGAC+CGG | - | chr5.3:33798888-33798907 | MS.gene64340:intron | 45.0% |
| ! | AGCTTTTGCTTGAAGGTCTG+AGG | + | chr5.3:33800721-33800740 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr5.3:33799871-33799890 | None:intergenic | 45.0% |
| ! | CCAAACCGACTCAGTTGATT+GGG | + | chr5.3:33798682-33798701 | None:intergenic | 45.0% |
| ! | CTCCACCAGATTTTTATGCC+AGG | - | chr5.3:33802223-33802242 | MS.gene64340:intron | 45.0% |
| ! | CTTGAAGGTCTGAGGTAAGA+TGG | + | chr5.3:33800713-33800732 | None:intergenic | 45.0% |
| ! | TTTCCCTTTTTGTCCCTTCG+GGG | - | chr5.3:33799663-33799682 | MS.gene64340:CDS | 45.0% |
| !! | GAAGCACTGAGGGTTTGTTT+AGG | + | chr5.3:33802790-33802809 | None:intergenic | 45.0% |
| !! | GAGAGAGGTTGATGATGAGA+AGG | - | chr5.3:33798242-33798261 | MS.gene64340:CDS | 45.0% |
| !! | GAGGTTGATGATGAGAAGGA+TGG | - | chr5.3:33798246-33798265 | MS.gene64340:CDS | 45.0% |
| !! | GGTATATGGGTTTGGTGCAT+TGG | - | chr5.3:33800126-33800145 | MS.gene64340:CDS | 45.0% |
| !! | GTTCATGGTTCGGTTTACGA+AGG | - | chr5.3:33800017-33800036 | MS.gene64340:intron | 45.0% |
| !!! | ATTATTTTTTTATTTTATAG+AGG | - | chr5.3:33799777-33799796 | MS.gene64340:intron | 5.0% |
| AGGACTCATCACTGTGAGTC+AGG | - | chr5.3:33802564-33802583 | MS.gene64340:intron | 50.0% | |
| ATGTCCCCGAAGGGACAAAA+AGG | + | chr5.3:33799670-33799689 | None:intergenic | 50.0% | |
| CACATAACCACATCCCCCAT+TGG | + | chr5.3:33801972-33801991 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr5.3:33799869-33799888 | MS.gene64340:intron | 50.0% | |
| CCCAATCAACTGAGTCGGTT+TGG | - | chr5.3:33798679-33798698 | MS.gene64340:intron | 50.0% | |
| CCTTCAAGCAAAAGCTGCTC+AGG | - | chr5.3:33800725-33800744 | MS.gene64340:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr5.3:33799866-33799885 | None:intergenic | 50.0% | |
| GTGGGATTGAACAATGCACC+AGG | - | chr5.3:33799163-33799182 | MS.gene64340:intron | 50.0% | |
| TATCGTGGAGGTTCAGAGAG+AGG | - | chr5.3:33798227-33798246 | MS.gene64340:CDS | 50.0% | |
| TCCTCGACGTCCTTATAGCA+AGG | + | chr5.3:33798807-33798826 | None:intergenic | 50.0% | |
| TCGAACTACAAGCCACTGGT+TGG | - | chr5.3:33801863-33801882 | MS.gene64340:intron | 50.0% | |
| TGTCCCCGAAGGGACAAAAA+GGG | + | chr5.3:33799669-33799688 | None:intergenic | 50.0% | |
| TGTGGGAGATGGATGGAGTA+TGG | - | chr5.3:33802170-33802189 | MS.gene64340:intron | 50.0% | |
| TGTTGACCATTGACCGGTAG+TGG | - | chr5.3:33798894-33798913 | MS.gene64340:intron | 50.0% | |
| TTGGGTCAACGTCTCAGACA+AGG | + | chr5.3:33798664-33798683 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr5.3:33799872-33799891 | None:intergenic | 50.0% |
| ! | CCTGAGCAGCTTTTGCTTGA+AGG | + | chr5.3:33800728-33800747 | None:intergenic | 50.0% |
| ! | CTTCTGCTTTGGACCGTTCA+TGG | - | chr5.3:33800002-33800021 | MS.gene64340:intron | 50.0% |
| ! | GCCAAACCGACTCAGTTGAT+TGG | + | chr5.3:33798683-33798702 | None:intergenic | 50.0% |
| ! | GCTTTGGACCGTTCATGGTT+CGG | - | chr5.3:33800007-33800026 | MS.gene64340:intron | 50.0% |
| ! | TCCTTGCTATAAGGACGTCG+AGG | - | chr5.3:33798803-33798822 | MS.gene64340:intron | 50.0% |
| ! | TGATACACAGAAGGTGGTGG+AGG | - | chr5.3:33798272-33798291 | MS.gene64340:CDS | 50.0% |
| !! | ACAGCTCTGGAGGTTTATCG+TGG | - | chr5.3:33798212-33798231 | MS.gene64340:CDS | 50.0% |
| !! | AGCTAAGGCAAGAAGCACTG+AGG | + | chr5.3:33802801-33802820 | None:intergenic | 50.0% |
| !! | CACGCCTTTAGTTCTCGAAG+AGG | + | chr5.3:33800822-33800841 | None:intergenic | 50.0% |
| !! | CTGGATGCTTGGTGCTCAAA+TGG | - | chr5.3:33801886-33801905 | MS.gene64340:intron | 50.0% |
| !! | GCTAAGGCAAGAAGCACTGA+GGG | + | chr5.3:33802800-33802819 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+GGG | + | chr5.3:33799858-33799877 | None:intergenic | 55.0% | |
| CCTAGTGTCAGCTCAGTAGC+CGG | + | chr5.3:33801669-33801688 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr5.3:33799864-33799883 | MS.gene64340:intron | 55.0% | |
| CTACAGCCACTACCGGTCAA+TGG | + | chr5.3:33798903-33798922 | None:intergenic | 55.0% | |
| CTACAGGCTACAGCCACTAC+CGG | + | chr5.3:33798910-33798929 | None:intergenic | 55.0% | |
| CTCGTCGAACTACAAGCCAC+TGG | - | chr5.3:33801859-33801878 | MS.gene64340:intron | 55.0% | |
| GAGGTGACACGTGTACCCTT+GGG | + | chr5.3:33801842-33801861 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr5.3:33799858-33799877 | MS.gene64340:intron | 55.0% | |
| ! | ACTACAAGCCACTGGTTGGC+TGG | - | chr5.3:33801867-33801886 | MS.gene64340:intron | 55.0% |
| ! | ATGAGGCAGGTTGGCATAGC+TGG | - | chr5.3:33802834-33802853 | MS.gene64340:intron | 55.0% |
| ! | CAGTGGCTTGTAGTTCGACG+AGG | + | chr5.3:33801861-33801880 | None:intergenic | 55.0% |
| !! | GCTCTGGAGGTTTATCGTGG+AGG | - | chr5.3:33798215-33798234 | MS.gene64340:CDS | 55.0% |
| !! | TGGAGGAAGTGCTGCAGAAG+CGG | - | chr5.3:33798289-33798308 | MS.gene64340:CDS | 55.0% |
| ATTAGCATGGCCCCTGCGCA+AGG | - | chr5.3:33799718-33799737 | MS.gene64340:CDS | 60.0% | |
| CACTAAGTGGGGTCGGCTAC+AGG | + | chr5.3:33799859-33799878 | None:intergenic | 60.0% | |
| CCAAGCATCCAGCCAACCAG+TGG | + | chr5.3:33801878-33801897 | None:intergenic | 60.0% | |
| CCGGCTACTGAGCTGACACT+AGG | - | chr5.3:33801666-33801685 | MS.gene64340:intron | 60.0% | |
| CGAGGTGACACGTGTACCCT+TGG | + | chr5.3:33801843-33801862 | None:intergenic | 60.0% | |
| CTGTAGCCGACCCCACTTAG+TGG | - | chr5.3:33799857-33799876 | MS.gene64340:intron | 60.0% | |
| GTGCGTGTCATCCTTGCGCA+GGG | + | chr5.3:33799732-33799751 | None:intergenic | 60.0% | |
| TGCGTGTCATCCTTGCGCAG+GGG | + | chr5.3:33799731-33799750 | None:intergenic | 60.0% | |
| TGTGCGTGTCATCCTTGCGC+AGG | + | chr5.3:33799733-33799752 | None:intergenic | 60.0% | |
| ! | CCACTGGTTGGCTGGATGCT+TGG | - | chr5.3:33801875-33801894 | MS.gene64340:intron | 60.0% |
| ! | TGACTCCGGAACAGCTCTGG+AGG | - | chr5.3:33798202-33798221 | MS.gene64340:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 33798201 | 33803093 | 33798201 | ID=MS.gene64340 |
| chr5.3 | mRNA | 33798201 | 33803093 | 33798201 | ID=MS.gene64340.t1;Parent=MS.gene64340 |
| chr5.3 | exon | 33802887 | 33803093 | 33802887 | ID=MS.gene64340.t1.exon1;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33802887 | 33803093 | 33802887 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33801681 | 33801877 | 33801681 | ID=MS.gene64340.t1.exon2;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33801681 | 33801877 | 33801681 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33800451 | 33800683 | 33800451 | ID=MS.gene64340.t1.exon3;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33800451 | 33800683 | 33800451 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33800031 | 33800257 | 33800031 | ID=MS.gene64340.t1.exon4;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33800031 | 33800257 | 33800031 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33799634 | 33799795 | 33799634 | ID=MS.gene64340.t1.exon5;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33799634 | 33799795 | 33799634 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33799403 | 33799476 | 33799403 | ID=MS.gene64340.t1.exon6;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33799403 | 33799476 | 33799403 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33799216 | 33799357 | 33799216 | ID=MS.gene64340.t1.exon7;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33799216 | 33799357 | 33799216 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33799049 | 33799135 | 33799049 | ID=MS.gene64340.t1.exon8;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33799049 | 33799135 | 33799049 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| chr5.3 | exon | 33798201 | 33798451 | 33798201 | ID=MS.gene64340.t1.exon9;Parent=MS.gene64340.t1 |
| chr5.3 | CDS | 33798201 | 33798451 | 33798201 | ID=cds.MS.gene64340.t1;Parent=MS.gene64340.t1 |
| Gene Sequence |
| Protein sequence |
