Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64416.t1 | AFK46072.1 | 69.9 | 326 | 45 | 2 | 1 | 273 | 1 | 326 | 8.40E-115 | 423.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64416.t1 | Q9SAH9 | 34.9 | 318 | 147 | 6 | 9 | 270 | 4 | 317 | 8.5e-39 | 162.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64416.t1 | I3T0N0 | 69.9 | 326 | 45 | 2 | 1 | 273 | 1 | 326 | 6.1e-115 | 423.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051177 | MS.gene64416 | 0.833084 | 6.53E-56 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene64416 | MS.gene65685 | PPI |
MS.gene64416 | MS.gene63037 | PPI |
MS.gene64416 | MS.gene053809 | PPI |
MS.gene96654 | MS.gene64416 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64416.t1 | MTR_4g009040 | 76.074 | 326 | 25 | 2 | 1 | 273 | 1 | 326 | 4.99e-174 | 483 |
MS.gene64416.t1 | MTR_4g009040 | 75.152 | 330 | 25 | 2 | 1 | 273 | 1 | 330 | 1.92e-173 | 482 |
MS.gene64416.t1 | MTR_4g009690 | 75.077 | 325 | 28 | 2 | 1 | 272 | 1 | 325 | 4.25e-169 | 471 |
MS.gene64416.t1 | MTR_4g009690 | 74.769 | 325 | 28 | 3 | 1 | 272 | 1 | 324 | 1.55e-166 | 464 |
MS.gene64416.t1 | MTR_4g006940 | 36.562 | 320 | 151 | 3 | 3 | 270 | 7 | 326 | 8.22e-55 | 180 |
MS.gene64416.t1 | MTR_2g104960 | 38.658 | 313 | 134 | 5 | 13 | 270 | 20 | 329 | 5.06e-54 | 178 |
MS.gene64416.t1 | MTR_4g077100 | 35.873 | 315 | 141 | 8 | 11 | 266 | 9 | 321 | 2.19e-53 | 176 |
MS.gene64416.t1 | MTR_5g072620 | 33.746 | 323 | 147 | 6 | 10 | 270 | 2 | 319 | 1.82e-51 | 171 |
MS.gene64416.t1 | MTR_4g077130 | 35.238 | 315 | 143 | 8 | 11 | 266 | 7 | 319 | 1.06e-49 | 167 |
MS.gene64416.t1 | MTR_4g006940 | 37.729 | 273 | 122 | 2 | 3 | 227 | 7 | 279 | 1.98e-47 | 159 |
MS.gene64416.t1 | MTR_4g006940 | 37.729 | 273 | 122 | 2 | 3 | 227 | 7 | 279 | 1.98e-47 | 159 |
MS.gene64416.t1 | MTR_3g005210 | 33.228 | 316 | 152 | 6 | 9 | 266 | 2 | 316 | 1.46e-46 | 158 |
MS.gene64416.t1 | MTR_4g077100 | 36.162 | 271 | 117 | 7 | 11 | 226 | 9 | 278 | 1.50e-45 | 154 |
MS.gene64416.t1 | MTR_3g005170 | 36.082 | 291 | 152 | 9 | 6 | 266 | 3 | 289 | 1.52e-45 | 155 |
MS.gene64416.t1 | MTR_8g062440 | 34.579 | 321 | 146 | 9 | 11 | 271 | 6 | 322 | 1.37e-44 | 153 |
MS.gene64416.t1 | MTR_8g062440 | 34.783 | 322 | 145 | 10 | 11 | 271 | 6 | 323 | 8.13e-44 | 151 |
MS.gene64416.t1 | MTR_3g005170 | 33.540 | 322 | 149 | 9 | 6 | 266 | 3 | 320 | 3.22e-43 | 150 |
MS.gene64416.t1 | MTR_1g022440 | 32.722 | 327 | 156 | 9 | 5 | 270 | 2 | 325 | 2.09e-42 | 148 |
MS.gene64416.t1 | MTR_8g062110 | 34.579 | 321 | 146 | 9 | 11 | 271 | 7 | 323 | 4.37e-42 | 147 |
MS.gene64416.t1 | MTR_8g062110 | 34.688 | 320 | 145 | 9 | 11 | 270 | 16 | 331 | 4.83e-42 | 147 |
MS.gene64416.t1 | MTR_3g031650 | 30.841 | 321 | 159 | 5 | 10 | 270 | 2 | 319 | 2.37e-41 | 145 |
MS.gene64416.t1 | MTR_3g005170 | 33.696 | 276 | 127 | 7 | 6 | 226 | 3 | 277 | 5.68e-41 | 142 |
MS.gene64416.t1 | MTR_8g062710 | 75.556 | 90 | 12 | 1 | 12 | 101 | 19 | 98 | 1.07e-39 | 134 |
MS.gene64416.t1 | MTR_2g101330 | 31.153 | 321 | 158 | 6 | 12 | 272 | 4 | 321 | 1.17e-37 | 135 |
MS.gene64416.t1 | MTR_2g028620 | 31.928 | 332 | 155 | 9 | 5 | 271 | 2 | 327 | 2.55e-37 | 134 |
MS.gene64416.t1 | MTR_8g062440 | 34.831 | 267 | 115 | 7 | 11 | 221 | 6 | 269 | 6.77e-37 | 133 |
MS.gene64416.t1 | MTR_8g062110 | 34.444 | 270 | 118 | 7 | 11 | 224 | 7 | 273 | 2.40e-35 | 128 |
MS.gene64416.t1 | MTR_8g062110 | 33.566 | 286 | 124 | 8 | 11 | 240 | 7 | 282 | 2.52e-35 | 128 |
MS.gene64416.t1 | MTR_3g031650 | 29.889 | 271 | 130 | 4 | 10 | 223 | 2 | 269 | 9.50e-35 | 126 |
MS.gene64416.t1 | MTR_0164s0070 | 35.683 | 227 | 106 | 5 | 12 | 232 | 4 | 196 | 2.60e-34 | 123 |
MS.gene64416.t1 | MTR_5g056600 | 27.358 | 318 | 167 | 6 | 14 | 270 | 5 | 319 | 7.19e-34 | 125 |
MS.gene64416.t1 | MTR_1g022445 | 29.781 | 319 | 162 | 7 | 13 | 270 | 8 | 325 | 1.38e-33 | 125 |
MS.gene64416.t1 | MTR_4g092080 | 31.722 | 331 | 149 | 11 | 11 | 269 | 12 | 337 | 1.61e-32 | 122 |
MS.gene64416.t1 | MTR_2g028620 | 33.096 | 281 | 120 | 8 | 5 | 223 | 2 | 276 | 1.61e-32 | 121 |
MS.gene64416.t1 | MTR_8g062708 | 82.812 | 64 | 11 | 0 | 165 | 228 | 5 | 68 | 4.73e-30 | 109 |
MS.gene64416.t1 | MTR_0685s0030 | 33.962 | 159 | 99 | 3 | 112 | 266 | 2 | 158 | 2.26e-23 | 93.6 |
MS.gene64416.t1 | MTR_4g023730 | 27.660 | 329 | 170 | 8 | 8 | 270 | 3 | 329 | 4.84e-21 | 91.3 |
MS.gene64416.t1 | MTR_8g062110 | 33.152 | 184 | 113 | 4 | 92 | 271 | 60 | 237 | 2.78e-20 | 87.4 |
MS.gene64416.t1 | MTR_4g081440 | 43.750 | 96 | 52 | 1 | 1 | 96 | 12 | 105 | 3.49e-18 | 83.6 |
MS.gene64416.t1 | MTR_7g074730 | 49.398 | 83 | 40 | 2 | 12 | 92 | 7 | 89 | 3.50e-18 | 83.2 |
MS.gene64416.t1 | MTR_7g074730 | 30.303 | 165 | 108 | 3 | 113 | 270 | 164 | 328 | 3.76e-13 | 68.9 |
MS.gene64416.t1 | MTR_4g081440 | 43.750 | 96 | 52 | 1 | 1 | 96 | 8 | 101 | 3.88e-18 | 83.2 |
MS.gene64416.t1 | MTR_7g074880 | 32.515 | 163 | 105 | 2 | 113 | 270 | 164 | 326 | 1.85e-17 | 81.3 |
MS.gene64416.t1 | MTR_7g074880 | 46.988 | 83 | 42 | 1 | 12 | 92 | 7 | 89 | 6.07e-16 | 76.6 |
MS.gene64416.t1 | MTR_0685s0030 | 33.913 | 115 | 75 | 1 | 112 | 226 | 2 | 115 | 2.01e-17 | 76.6 |
MS.gene64416.t1 | MTR_7g074820 | 50.602 | 83 | 39 | 2 | 12 | 92 | 7 | 89 | 4.17e-17 | 80.1 |
MS.gene64416.t1 | MTR_7g074820 | 31.737 | 167 | 104 | 4 | 113 | 270 | 164 | 329 | 7.42e-15 | 73.6 |
MS.gene64416.t1 | MTR_7g074850 | 46.988 | 83 | 42 | 2 | 12 | 92 | 7 | 89 | 5.65e-16 | 77.0 |
MS.gene64416.t1 | MTR_7g074850 | 31.325 | 166 | 106 | 4 | 113 | 270 | 164 | 329 | 8.24e-13 | 67.8 |
MS.gene64416.t1 | MTR_7g074710 | 44.565 | 92 | 48 | 2 | 12 | 101 | 7 | 97 | 3.16e-15 | 74.7 |
MS.gene64416.t1 | MTR_7g117190 | 47.561 | 82 | 42 | 1 | 12 | 92 | 6 | 87 | 2.34e-14 | 72.0 |
MS.gene64416.t1 | MTR_7g117190 | 47.561 | 82 | 42 | 1 | 12 | 92 | 6 | 87 | 2.61e-14 | 72.4 |
MS.gene64416.t1 | MTR_2g013230 | 47.561 | 82 | 42 | 1 | 12 | 92 | 7 | 88 | 3.25e-14 | 72.0 |
MS.gene64416.t1 | MTR_7g074870 | 31.288 | 163 | 107 | 2 | 113 | 270 | 126 | 288 | 5.86e-14 | 70.9 |
MS.gene64416.t1 | MTR_8g062110 | 32.540 | 126 | 80 | 2 | 99 | 224 | 67 | 187 | 7.10e-14 | 68.9 |
MS.gene64416.t1 | MTR_2g013250 | 48.148 | 81 | 41 | 1 | 12 | 91 | 6 | 86 | 8.58e-14 | 70.9 |
MS.gene64416.t1 | MTR_2g013260 | 48.148 | 81 | 41 | 1 | 12 | 91 | 7 | 87 | 9.38e-14 | 70.1 |
MS.gene64416.t1 | MTR_2g013260 | 48.148 | 81 | 41 | 1 | 12 | 91 | 7 | 87 | 1.15e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64416.t1 | AT2G33590 | 53.355 | 313 | 92 | 3 | 12 | 270 | 8 | 320 | 4.48e-102 | 300 |
MS.gene64416.t1 | AT2G33600 | 49.379 | 322 | 103 | 5 | 6 | 270 | 2 | 320 | 3.99e-93 | 278 |
MS.gene64416.t1 | AT1G76470 | 46.417 | 321 | 114 | 4 | 11 | 273 | 5 | 325 | 2.50e-88 | 266 |
MS.gene64416.t1 | AT1G51410 | 35.671 | 328 | 144 | 7 | 6 | 271 | 2 | 324 | 1.06e-55 | 182 |
MS.gene64416.t1 | AT1G09510 | 40.062 | 322 | 132 | 8 | 8 | 270 | 3 | 322 | 6.01e-55 | 180 |
MS.gene64416.t1 | AT1G66800 | 38.730 | 315 | 136 | 8 | 11 | 270 | 6 | 318 | 3.38e-51 | 170 |
MS.gene64416.t1 | AT1G80820 | 36.278 | 317 | 144 | 5 | 9 | 270 | 4 | 317 | 1.57e-50 | 169 |
MS.gene64416.t1 | AT1G15950 | 37.025 | 316 | 141 | 6 | 10 | 270 | 10 | 322 | 6.17e-48 | 162 |
MS.gene64416.t1 | AT1G15950 | 37.025 | 316 | 141 | 6 | 10 | 270 | 10 | 322 | 6.17e-48 | 162 |
MS.gene64416.t1 | AT1G09480 | 35.312 | 320 | 144 | 7 | 11 | 270 | 53 | 369 | 1.19e-47 | 162 |
MS.gene64416.t1 | AT1G09480 | 35.000 | 320 | 145 | 7 | 11 | 270 | 6 | 322 | 3.58e-47 | 160 |
MS.gene64416.t1 | AT1G09490 | 33.333 | 321 | 149 | 6 | 11 | 270 | 6 | 322 | 1.70e-46 | 158 |
MS.gene64416.t1 | AT5G19440 | 33.735 | 332 | 152 | 9 | 1 | 271 | 1 | 325 | 4.30e-45 | 155 |
MS.gene64416.t1 | AT1G15950 | 36.721 | 305 | 135 | 6 | 11 | 260 | 11 | 312 | 8.82e-45 | 154 |
MS.gene64416.t1 | AT5G42800 | 33.231 | 325 | 155 | 7 | 7 | 270 | 2 | 325 | 9.19e-45 | 155 |
MS.gene64416.t1 | AT1G15950 | 39.051 | 274 | 113 | 5 | 10 | 232 | 10 | 280 | 3.36e-44 | 151 |
MS.gene64416.t1 | AT1G15950 | 39.483 | 271 | 110 | 5 | 10 | 229 | 10 | 277 | 4.13e-44 | 151 |
MS.gene64416.t1 | AT1G80820 | 38.148 | 270 | 113 | 4 | 9 | 227 | 4 | 270 | 1.06e-43 | 149 |
MS.gene64416.t1 | AT1G15950 | 39.405 | 269 | 109 | 5 | 10 | 227 | 10 | 275 | 4.98e-43 | 148 |
MS.gene64416.t1 | AT5G58490 | 33.333 | 315 | 153 | 5 | 13 | 270 | 9 | 323 | 5.47e-43 | 149 |
MS.gene64416.t1 | AT2G02400 | 29.688 | 320 | 156 | 8 | 13 | 270 | 6 | 318 | 2.00e-41 | 145 |
MS.gene64416.t1 | AT1G09500 | 32.722 | 327 | 152 | 7 | 8 | 270 | 3 | 325 | 2.66e-40 | 142 |
MS.gene64416.t1 | AT1G09500 | 33.942 | 274 | 118 | 5 | 8 | 222 | 3 | 272 | 1.84e-37 | 134 |
MS.gene64416.t1 | AT4G35420 | 30.625 | 320 | 160 | 7 | 12 | 272 | 7 | 323 | 4.37e-35 | 129 |
MS.gene64416.t1 | AT1G09490 | 29.682 | 283 | 135 | 5 | 48 | 270 | 13 | 291 | 1.14e-29 | 113 |
MS.gene64416.t1 | AT1G09500 | 29.720 | 286 | 134 | 6 | 48 | 270 | 10 | 291 | 1.10e-23 | 97.8 |
MS.gene64416.t1 | AT1G61720 | 28.446 | 341 | 173 | 12 | 1 | 272 | 1 | 339 | 1.97e-23 | 97.8 |
MS.gene64416.t1 | AT1G68540 | 31.720 | 186 | 120 | 3 | 89 | 270 | 32 | 214 | 2.12e-23 | 95.1 |
MS.gene64416.t1 | AT1G68540 | 31.720 | 186 | 120 | 3 | 89 | 270 | 139 | 321 | 1.23e-22 | 95.5 |
MS.gene64416.t1 | AT1G25460 | 30.811 | 185 | 121 | 3 | 90 | 270 | 138 | 319 | 3.88e-21 | 91.3 |
MS.gene64416.t1 | AT4G27250 | 37.410 | 139 | 72 | 4 | 1 | 139 | 1 | 124 | 5.51e-18 | 82.8 |
MS.gene64416.t1 | AT1G15950 | 34.483 | 174 | 107 | 2 | 101 | 270 | 54 | 224 | 6.01e-18 | 81.3 |
MS.gene64416.t1 | AT4G27250 | 37.410 | 139 | 72 | 4 | 1 | 139 | 1 | 124 | 6.30e-18 | 82.8 |
MS.gene64416.t1 | AT2G45400 | 51.807 | 83 | 37 | 1 | 13 | 92 | 40 | 122 | 9.87e-18 | 80.9 |
MS.gene64416.t1 | AT2G45400 | 51.807 | 83 | 37 | 1 | 13 | 92 | 40 | 122 | 3.07e-17 | 80.5 |
MS.gene64416.t1 | AT2G45400 | 51.807 | 83 | 37 | 1 | 13 | 92 | 40 | 122 | 4.03e-17 | 80.5 |
MS.gene64416.t1 | AT2G45400 | 30.460 | 174 | 106 | 5 | 107 | 270 | 196 | 364 | 2.17e-16 | 78.6 |
MS.gene64416.t1 | AT2G45400 | 30.460 | 174 | 106 | 5 | 107 | 270 | 139 | 307 | 1.11e-16 | 78.6 |
MS.gene64416.t1 | AT2G23910 | 29.921 | 127 | 64 | 4 | 14 | 139 | 11 | 113 | 2.90e-11 | 62.8 |
MS.gene64416.t1 | AT2G23910 | 29.921 | 127 | 64 | 4 | 14 | 139 | 11 | 113 | 3.21e-11 | 62.8 |
MS.gene64416.t1 | AT2G23910 | 29.921 | 127 | 64 | 4 | 14 | 139 | 11 | 113 | 3.46e-11 | 62.8 |
Find 58 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTTGTCCTACTCTTGTTT+TGG | 0.177937 | 2.1:-49328349 | MS.gene64416:CDS |
CTCAGAGAAACTGCAAAGTT+TGG | 0.267800 | 2.1:-49327011 | MS.gene64416:CDS |
AAAGTTTGGGTTGGAATTTC+AGG | 0.268144 | 2.1:-49326997 | MS.gene64416:CDS |
TTCAGCAAGTGTTCATATTT+CGG | 0.273006 | 2.1:+49329179 | None:intergenic |
AATAAGAAGGTGTGTGTAAC+TGG | 0.296410 | 2.1:-49330407 | MS.gene64416:CDS |
ATATGAACACTTGCTGAAAC+TGG | 0.306288 | 2.1:-49329174 | MS.gene64416:CDS |
TTTGCGGTTGACTGTAAAAT+TGG | 0.328927 | 2.1:+49328324 | None:intergenic |
TTCGTAGGGTACTTGTAGTT+TGG | 0.336746 | 2.1:+49327585 | None:intergenic |
GCTCTTCAAAGCAGATATCT+TGG | 0.340288 | 2.1:-49329129 | MS.gene64416:CDS |
CTGTTCTTCTGCTTCTGTCT+TGG | 0.343397 | 2.1:+49328413 | None:intergenic |
TATCTGCTTTGAAGAGCTTA+AGG | 0.348799 | 2.1:+49329135 | None:intergenic |
CATTGGAGAATAAGCTTTGT+TGG | 0.352362 | 2.1:-49327740 | MS.gene64416:CDS |
CGTAGTTGATGCAATACTTT+CGG | 0.367768 | 2.1:-49327700 | MS.gene64416:CDS |
CAAGACAGAAGCAGAAGAAC+AGG | 0.371007 | 2.1:-49328412 | MS.gene64416:CDS |
CACTATCGAGACACGAGATT+TGG | 0.373994 | 2.1:-49327631 | MS.gene64416:CDS |
CTTAGAAGGCCATGACTCAT+TGG | 0.391769 | 2.1:-49327757 | MS.gene64416:intron |
TGATTCTGTTGAGAGCTATA+AGG | 0.391851 | 2.1:-49326954 | MS.gene64416:CDS |
TCAGTTTACGCTGCAATTGT+TGG | 0.392704 | 2.1:-49329098 | MS.gene64416:CDS |
AGAAACGTTACCTCAGGATT+AGG | 0.396379 | 2.1:+49329026 | None:intergenic |
AACCAAGCTACTTGAATTTG+CGG | 0.408743 | 2.1:+49328308 | None:intergenic |
TCAGAGAAACTGCAAAGTTT+GGG | 0.410030 | 2.1:-49327010 | MS.gene64416:CDS |
TCCATGGACAAAGTAACCTT+TGG | 0.412376 | 2.1:+49330340 | None:intergenic |
GAAAATGAAGCTTACTTCGT+AGG | 0.425779 | 2.1:+49327570 | None:intergenic |
GGGTTGGAATTTCAGGCCAT+TGG | 0.441671 | 2.1:-49326990 | MS.gene64416:CDS |
TCCAAAGGTTACTTTGTCCA+TGG | 0.474794 | 2.1:-49330341 | MS.gene64416:CDS |
CATGGAACTGTTAGAGAACC+TGG | 0.480190 | 2.1:-49330323 | MS.gene64416:intron |
GGTACAACTGTTGAAGGTAC+AGG | 0.487565 | 2.1:+49329047 | None:intergenic |
GAGATTTGGTGGAGAAATTG+AGG | 0.494019 | 2.1:-49327617 | MS.gene64416:CDS |
CAAAACAAGAGTAGGACAAA+TGG | 0.495861 | 2.1:+49328350 | None:intergenic |
AAGGTGTGTGTAACTGGAGC+AGG | 0.505575 | 2.1:-49330401 | MS.gene64416:CDS |
CAGGAGGGTTTGTAGCATCA+TGG | 0.506329 | 2.1:-49330382 | MS.gene64416:CDS |
AACCGCAAATTCAAGTAGCT+TGG | 0.506503 | 2.1:-49328310 | MS.gene64416:CDS |
TATCGAGACACGAGATTTGG+TGG | 0.511530 | 2.1:-49327628 | MS.gene64416:CDS |
GGATTAGGTACAACTGTTGA+AGG | 0.511645 | 2.1:+49329041 | None:intergenic |
AAAATGAAGCTTACTTCGTA+GGG | 0.514933 | 2.1:+49327571 | None:intergenic |
AGAAACTGCAAAGTTTGGGT+TGG | 0.515747 | 2.1:-49327006 | MS.gene64416:CDS |
TTGGAATTTCAGGCCATTGG+AGG | 0.517528 | 2.1:-49326987 | MS.gene64416:CDS |
GTTGAGAGCTATAAGGAGGC+TGG | 0.522498 | 2.1:-49326947 | MS.gene64416:CDS |
TATGAGAATCACAAGGCAGA+TGG | 0.526023 | 2.1:-49327675 | MS.gene64416:CDS |
GTTAAACTTCTCCTTTCCAA+AGG | 0.537463 | 2.1:-49330356 | MS.gene64416:CDS |
TCAATGAGTGTTTCCTCCAA+TGG | 0.543548 | 2.1:+49326974 | None:intergenic |
CAGGTTCTCTAACAGTTCCA+TGG | 0.559703 | 2.1:+49330324 | None:intergenic |
GAGGAGAAAATGGAAACAAG+TGG | 0.561006 | 2.1:-49330443 | None:intergenic |
TGCTGACAGCTATATTGAGA+TGG | 0.567912 | 2.1:-49327053 | MS.gene64416:intron |
ATTGGTCCCAAAACAAGAGT+AGG | 0.572490 | 2.1:+49328342 | None:intergenic |
AGGAGAAAATGGAAACAAGT+GGG | 0.578026 | 2.1:-49330442 | None:intergenic |
GAGTGTTAATAACAATAAGA+AGG | 0.578284 | 2.1:-49330420 | MS.gene64416:CDS |
ATGAGAATCACAAGGCAGAT+GGG | 0.578597 | 2.1:-49327674 | MS.gene64416:CDS |
GTGTGTGTAACTGGAGCAGG+AGG | 0.579894 | 2.1:-49330398 | MS.gene64416:CDS |
AAGGTACAGGGCTAGCAACA+TGG | 0.584108 | 2.1:+49329060 | None:intergenic |
GGACAAAGTAACCTTTGGAA+AGG | 0.613225 | 2.1:+49330345 | None:intergenic |
GCTTATTCTCCAATGAGTCA+TGG | 0.616079 | 2.1:+49327748 | None:intergenic |
GTACAACTGTTGAAGGTACA+GGG | 0.621515 | 2.1:+49329048 | None:intergenic |
TTCTGTTGAGAGCTATAAGG+AGG | 0.627623 | 2.1:-49326951 | MS.gene64416:CDS |
AACAGTTGTACCTAATCCTG+AGG | 0.672409 | 2.1:-49329036 | MS.gene64416:intron |
GAAAAGAACTGGACTTAACG+TGG | 0.682734 | 2.1:-49328376 | MS.gene64416:CDS |
TTCGGCTTATGAGAATCACA+AGG | 0.712543 | 2.1:-49327682 | MS.gene64416:CDS |
TGTGTGTAACTGGAGCAGGA+GGG | 0.744318 | 2.1:-49330397 | MS.gene64416:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATATATATATATATTTAT+CGG | + | chr2.1:49327528-49327547 | None:intergenic | 0.0% |
!! | AATTTGAAAACAAAATATAA+AGG | + | chr2.1:49327721-49327740 | None:intergenic | 10.0% |
!! | ATTTGAAAACAAAATATAAA+GGG | + | chr2.1:49327720-49327739 | None:intergenic | 10.0% |
!!! | AAAGAATAAAAAGTTTTTTT+GGG | - | chr2.1:49327623-49327642 | MS.gene64416:CDS | 10.0% |
!!! | ATTATTTAGTTTATGTTATA+AGG | - | chr2.1:49328015-49328034 | MS.gene64416:intron | 10.0% |
!! | AAAATATTTAAATTTAGAGG+TGG | + | chr2.1:49329837-49329856 | None:intergenic | 15.0% |
!! | AAATAGTATACTAAGAAATA+TGG | + | chr2.1:49328069-49328088 | None:intergenic | 15.0% |
!! | AAATATTTAAATTTAGAGGT+GGG | + | chr2.1:49329836-49329855 | None:intergenic | 15.0% |
!! | AAGAATTTCATTACTATATA+TGG | - | chr2.1:49327211-49327230 | MS.gene64416:intron | 15.0% |
!! | AGAATTAATTAAAAATGTCT+TGG | - | chr2.1:49327109-49327128 | MS.gene64416:intron | 15.0% |
!! | CTGAAAATATTTAAATTTAG+AGG | + | chr2.1:49329840-49329859 | None:intergenic | 15.0% |
!! | TGAAATTAGTTAAATTATAC+TGG | + | chr2.1:49329532-49329551 | None:intergenic | 15.0% |
!!! | AAACTTTTTATTCTTTGTAT+CGG | + | chr2.1:49327619-49327638 | None:intergenic | 15.0% |
!!! | CAAAGAATAAAAAGTTTTTT+TGG | - | chr2.1:49327622-49327641 | MS.gene64416:CDS | 15.0% |
!! | ATCATATGATTCATATCTTA+AGG | + | chr2.1:49328796-49328815 | None:intergenic | 20.0% |
!! | TAACTTCTATATAAAATCCT+TGG | - | chr2.1:49329203-49329222 | MS.gene64416:intron | 20.0% |
!! | TAATTAAGCAGTATATGTAA+AGG | - | chr2.1:49329946-49329965 | MS.gene64416:intron | 20.0% |
!! | TACATATACTGCTTAATTAA+TGG | + | chr2.1:49329945-49329964 | None:intergenic | 20.0% |
!!! | AAATTGAAGAAAGTTTTGAT+TGG | - | chr2.1:49327799-49327818 | MS.gene64416:intron | 20.0% |
!!! | CTTTATCTTTTGGTAAATTA+GGG | + | chr2.1:49328671-49328690 | None:intergenic | 20.0% |
!!! | GATTTTATATAGAAGTTATG+TGG | + | chr2.1:49329201-49329220 | None:intergenic | 20.0% |
!!! | TCTGTTTTTCAAATTATCAT+TGG | - | chr2.1:49330195-49330214 | MS.gene64416:intron | 20.0% |
! | AATGATCATGTTAGTAAACA+CGG | - | chr2.1:49328478-49328497 | MS.gene64416:intron | 25.0% |
! | ACTATATATGGAAAGAAACA+AGG | - | chr2.1:49327223-49327242 | MS.gene64416:intron | 25.0% |
! | AGTCATTTACTACAATTTGT+AGG | + | chr2.1:49327879-49327898 | None:intergenic | 25.0% |
! | ATTCAATTGTCTTTCTTAGA+AGG | - | chr2.1:49329591-49329610 | MS.gene64416:intron | 25.0% |
! | CATATACAAGTATAACATGT+TGG | + | chr2.1:49327952-49327971 | None:intergenic | 25.0% |
! | CATTATCATGTAAAACAACA+AGG | + | chr2.1:49329174-49329193 | None:intergenic | 25.0% |
! | GAGAAGTCTAAACAAATTTA+TGG | - | chr2.1:49327285-49327304 | MS.gene64416:intron | 25.0% |
! | GAGTGTTAATAACAATAAGA+AGG | - | chr2.1:49326942-49326961 | MS.gene64416:CDS | 25.0% |
! | GTTGTAATAAGAACTTGATA+AGG | + | chr2.1:49329114-49329133 | None:intergenic | 25.0% |
! | TGTAACCATCAAATCTATAT+AGG | + | chr2.1:49330268-49330287 | None:intergenic | 25.0% |
!! | ACACTTTCAACGTAAATTTT+CGG | + | chr2.1:49330124-49330143 | None:intergenic | 25.0% |
!! | ACTTTTAACGTCAAAAACAT+AGG | - | chr2.1:49327493-49327512 | MS.gene64416:intron | 25.0% |
!! | GCTTTATCTTTTGGTAAATT+AGG | + | chr2.1:49328672-49328691 | None:intergenic | 25.0% |
!! | TTTTGGCGTCAATATTTATT+TGG | - | chr2.1:49329273-49329292 | MS.gene64416:intron | 25.0% |
!!! | AAAAGTTTTTTTGGGATTGT+CGG | - | chr2.1:49327631-49327650 | MS.gene64416:CDS | 25.0% |
!!! | ATTTTAGTCCCTAAAATTGA+AGG | + | chr2.1:49327338-49327357 | None:intergenic | 25.0% |
!!! | GAATTTTAACTCGCATTATA+CGG | + | chr2.1:49329152-49329171 | None:intergenic | 25.0% |
!!! | TCATTTAAACAACTAGCTTT+TGG | + | chr2.1:49327372-49327391 | None:intergenic | 25.0% |
!!! | TTCAATTTTAGGGACTAAAA+TGG | - | chr2.1:49327337-49327356 | MS.gene64416:intron | 25.0% |
AAAATGAAGCTTACTTCGTA+GGG | + | chr2.1:49329794-49329813 | None:intergenic | 30.0% | |
ACTTGATAAGGCATATTAGT+AGG | + | chr2.1:49329102-49329121 | None:intergenic | 30.0% | |
AGACTACTGCAAAAATACTA+AGG | - | chr2.1:49328723-49328742 | MS.gene64416:intron | 30.0% | |
ATCAGGAAAATTGTTGAGTA+AGG | - | chr2.1:49330012-49330031 | MS.gene64416:intron | 30.0% | |
CTGATAAACTTTCAACTTAC+TGG | + | chr2.1:49328436-49328455 | None:intergenic | 30.0% | |
GAGAGATAAATACTTGTATC+AGG | - | chr2.1:49329995-49330014 | MS.gene64416:intron | 30.0% | |
GTATGGACATACACATATAA+AGG | + | chr2.1:49329384-49329403 | None:intergenic | 30.0% | |
TCATGAATTACGAATATGCT+CGG | - | chr2.1:49329478-49329497 | MS.gene64416:intron | 30.0% | |
TCTCTACTAGAATAACAAGT+TGG | - | chr2.1:49327849-49327868 | MS.gene64416:intron | 30.0% | |
TTCAGCAAGTGTTCATATTT+CGG | + | chr2.1:49328186-49328205 | None:intergenic | 30.0% | |
! | AGTTCTTTTCGCAAAATTCA+GGG | + | chr2.1:49328976-49328995 | None:intergenic | 30.0% |
! | GTTCTCGTCAAACTTTTAAA+AGG | - | chr2.1:49329074-49329093 | MS.gene64416:CDS | 30.0% |
! | TCATCAATCGCTTTATCTTT+TGG | + | chr2.1:49328681-49328700 | None:intergenic | 30.0% |
! | TGTGATGACCTTCAATTTTA+GGG | - | chr2.1:49327327-49327346 | MS.gene64416:intron | 30.0% |
! | TTGTGATGACCTTCAATTTT+AGG | - | chr2.1:49327326-49327345 | MS.gene64416:intron | 30.0% |
! | TTTTTGTGCATAACAGATTC+AGG | - | chr2.1:49329250-49329269 | MS.gene64416:intron | 30.0% |
!! | AACTTGTTATTCTAGTAGAG+AGG | + | chr2.1:49327850-49327869 | None:intergenic | 30.0% |
!! | TTTTTGAAGAGGTCATATAC+AGG | + | chr2.1:49327760-49327779 | None:intergenic | 30.0% |
!!! | ATTTGTCCTACTCTTGTTTT+GGG | - | chr2.1:49329014-49329033 | MS.gene64416:intron | 30.0% |
!!! | TGTCACTTTAGACTTTTTCA+TGG | + | chr2.1:49328507-49328526 | None:intergenic | 30.0% |
AAAACACTATAACGGTGAAG+CGG | + | chr2.1:49329413-49329432 | None:intergenic | 35.0% | |
AACATTAGAAACGTTACCTC+AGG | + | chr2.1:49328345-49328364 | None:intergenic | 35.0% | |
AACCAAGCTACTTGAATTTG+CGG | + | chr2.1:49329057-49329076 | None:intergenic | 35.0% | |
ATGAGATGAGAAATAGTACC+AGG | + | chr2.1:49327060-49327079 | None:intergenic | 35.0% | |
ATGGAAAGAAACAAGGCTTA+AGG | - | chr2.1:49327230-49327249 | MS.gene64416:intron | 35.0% | |
ATTGTTGAGTAAGGAGAATG+AGG | - | chr2.1:49330021-49330040 | MS.gene64416:intron | 35.0% | |
CAAAACAAGAGTAGGACAAA+TGG | + | chr2.1:49329015-49329034 | None:intergenic | 35.0% | |
GAAAATGAAGCTTACTTCGT+AGG | + | chr2.1:49329795-49329814 | None:intergenic | 35.0% | |
GCTTGCCTATATAGATTTGA+TGG | - | chr2.1:49330260-49330279 | MS.gene64416:intron | 35.0% | |
GTTAAACTTCTCCTTTCCAA+AGG | - | chr2.1:49327006-49327025 | MS.gene64416:CDS | 35.0% | |
TAGCAGATAGTGTAGCTTAA+CGG | + | chr2.1:49329445-49329464 | None:intergenic | 35.0% | |
TCAGAGAAACTGCAAAGTTT+GGG | - | chr2.1:49330352-49330371 | MS.gene64416:CDS | 35.0% | |
TGATTCTGTTGAGAGCTATA+AGG | - | chr2.1:49330408-49330427 | MS.gene64416:CDS | 35.0% | |
TTGCAAACAATGTTGTACGA+TGG | - | chr2.1:49330053-49330072 | MS.gene64416:intron | 35.0% | |
TTTGCGGTTGACTGTAAAAT+TGG | + | chr2.1:49329041-49329060 | None:intergenic | 35.0% | |
! | AATAAGAAGGTGTGTGTAAC+TGG | - | chr2.1:49326955-49326974 | MS.gene64416:CDS | 35.0% |
! | ACATGTTGGTCTGTTTAAGA+TGG | + | chr2.1:49327938-49327957 | None:intergenic | 35.0% |
! | ATATGAACACTTGCTGAAAC+TGG | - | chr2.1:49328188-49328207 | MS.gene64416:intron | 35.0% |
! | CAGTTCTTTTCGCAAAATTC+AGG | + | chr2.1:49328977-49328996 | None:intergenic | 35.0% |
! | CATTGGAGAATAAGCTTTGT+TGG | - | chr2.1:49329622-49329641 | MS.gene64416:intron | 35.0% |
! | CGTAGTTGATGCAATACTTT+CGG | - | chr2.1:49329662-49329681 | MS.gene64416:intron | 35.0% |
! | CTACTAGAATAACAAGTTGG+TGG | - | chr2.1:49327852-49327871 | MS.gene64416:intron | 35.0% |
! | CTGAATTTTGCGAAAAGAAC+TGG | - | chr2.1:49328975-49328994 | MS.gene64416:intron | 35.0% |
! | CTTCACCGTTATAGTGTTTT+GGG | - | chr2.1:49329413-49329432 | MS.gene64416:intron | 35.0% |
! | TGCATCTTTTCTCTGTTTTG+AGG | - | chr2.1:49328107-49328126 | MS.gene64416:intron | 35.0% |
! | TTGGTCTGTTTAAGATGGTT+TGG | + | chr2.1:49327933-49327952 | None:intergenic | 35.0% |
! | TTTTGCAAGTTGCTACGTAT+GGG | + | chr2.1:49327402-49327421 | None:intergenic | 35.0% |
!! | AAAGTTTGGGTTGGAATTTC+AGG | - | chr2.1:49330365-49330384 | MS.gene64416:CDS | 35.0% |
!! | CATTTGTCCTACTCTTGTTT+TGG | - | chr2.1:49329013-49329032 | MS.gene64416:intron | 35.0% |
!! | TATCTGCTTTGAAGAGCTTA+AGG | + | chr2.1:49328230-49328249 | None:intergenic | 35.0% |
!! | TGCATAACAGATTCAGGTTT+TGG | - | chr2.1:49329256-49329275 | MS.gene64416:intron | 35.0% |
AAACACTATAACGGTGAAGC+GGG | + | chr2.1:49329412-49329431 | None:intergenic | 40.0% | |
AACAGTTGTACCTAATCCTG+AGG | - | chr2.1:49328326-49328345 | MS.gene64416:CDS | 40.0% | |
AACCGCAAATTCAAGTAGCT+TGG | - | chr2.1:49329052-49329071 | MS.gene64416:CDS | 40.0% | |
AAGAGGTCATATACAGGTCA+TGG | + | chr2.1:49327754-49327773 | None:intergenic | 40.0% | |
AGAAACGTTACCTCAGGATT+AGG | + | chr2.1:49328339-49328358 | None:intergenic | 40.0% | |
AGAAACTGCAAAGTTTGGGT+TGG | - | chr2.1:49330356-49330375 | MS.gene64416:CDS | 40.0% | |
AGCTTGTCTCAAAGCTAATG+TGG | - | chr2.1:49328602-49328621 | MS.gene64416:intron | 40.0% | |
ATACCTGAAGCTTAATCTGC+AGG | - | chr2.1:49328533-49328552 | MS.gene64416:intron | 40.0% | |
ATGAGAATCACAAGGCAGAT+GGG | - | chr2.1:49329688-49329707 | MS.gene64416:intron | 40.0% | |
ATTGGTCCCAAAACAAGAGT+AGG | + | chr2.1:49329023-49329042 | None:intergenic | 40.0% | |
CGACTCCCAAAACACTATAA+CGG | + | chr2.1:49329421-49329440 | None:intergenic | 40.0% | |
CTCAGAGAAACTGCAAAGTT+TGG | - | chr2.1:49330351-49330370 | MS.gene64416:CDS | 40.0% | |
GAAAAGAACTGGACTTAACG+TGG | - | chr2.1:49328986-49329005 | MS.gene64416:intron | 40.0% | |
GCTCTTCAAAGCAGATATCT+TGG | - | chr2.1:49328233-49328252 | MS.gene64416:intron | 40.0% | |
GCTTATTCTCCAATGAGTCA+TGG | + | chr2.1:49329617-49329636 | None:intergenic | 40.0% | |
GGATTAGGTACAACTGTTGA+AGG | + | chr2.1:49328324-49328343 | None:intergenic | 40.0% | |
GTTATTCTAGTAGAGAGGCT+TGG | + | chr2.1:49327845-49327864 | None:intergenic | 40.0% | |
TATGAGAATCACAAGGCAGA+TGG | - | chr2.1:49329687-49329706 | MS.gene64416:intron | 40.0% | |
TCAATGAGTGTTTCCTCCAA+TGG | + | chr2.1:49330391-49330410 | None:intergenic | 40.0% | |
TCAGTTTACGCTGCAATTGT+TGG | - | chr2.1:49328264-49328283 | MS.gene64416:intron | 40.0% | |
TCATATACAGGTCATGGAGT+TGG | + | chr2.1:49327748-49327767 | None:intergenic | 40.0% | |
TCCATGGACAAAGTAACCTT+TGG | + | chr2.1:49327025-49327044 | None:intergenic | 40.0% | |
TCTCAATATAGCTGTCAGCA+AGG | + | chr2.1:49330309-49330328 | None:intergenic | 40.0% | |
TGATCTATGAAGCATAGACG+TGG | + | chr2.1:49327682-49327701 | None:intergenic | 40.0% | |
TGCTGACAGCTATATTGAGA+TGG | - | chr2.1:49330309-49330328 | MS.gene64416:intron | 40.0% | |
TGTCCTACGATGGTCATAAA+TGG | + | chr2.1:49327454-49327473 | None:intergenic | 40.0% | |
TTCGGCTTATGAGAATCACA+AGG | - | chr2.1:49329680-49329699 | MS.gene64416:intron | 40.0% | |
TTCTGTTGAGAGCTATAAGG+AGG | - | chr2.1:49330411-49330430 | MS.gene64416:CDS | 40.0% | |
TTGAGTAAGGAGAATGAGGA+AGG | - | chr2.1:49330025-49330044 | MS.gene64416:intron | 40.0% | |
! | AAGCGATTGATGAGTCTTGT+TGG | - | chr2.1:49328688-49328707 | MS.gene64416:intron | 40.0% |
! | GCTTCACCGTTATAGTGTTT+TGG | - | chr2.1:49329412-49329431 | MS.gene64416:intron | 40.0% |
! | GGACAAAGTAACCTTTGGAA+AGG | + | chr2.1:49327020-49327039 | None:intergenic | 40.0% |
! | GTACAACTGTTGAAGGTACA+GGG | + | chr2.1:49328317-49328336 | None:intergenic | 40.0% |
! | GTCTATGTGTTGACACAAGT+CGG | + | chr2.1:49327658-49327677 | None:intergenic | 40.0% |
! | GTTTTGCAAGTTGCTACGTA+TGG | + | chr2.1:49327403-49327422 | None:intergenic | 40.0% |
! | TCCAAAGGTTACTTTGTCCA+TGG | - | chr2.1:49327021-49327040 | MS.gene64416:CDS | 40.0% |
! | TTCGTAGGGTACTTGTAGTT+TGG | + | chr2.1:49329780-49329799 | None:intergenic | 40.0% |
!! | GAGATTTGGTGGAGAAATTG+AGG | - | chr2.1:49329745-49329764 | MS.gene64416:intron | 40.0% |
!! | TGCTGAGCAGATTTTTGAAG+AGG | + | chr2.1:49327771-49327790 | None:intergenic | 40.0% |
!!! | CGTTATAGTGTTTTGGGAGT+CGG | - | chr2.1:49329419-49329438 | MS.gene64416:intron | 40.0% |
!!! | TGGTTCTAGTTTTGCCTTCA+TGG | - | chr2.1:49328400-49328419 | MS.gene64416:CDS | 40.0% |
AAGGCAAAACTAGAACCACG+CGG | + | chr2.1:49328398-49328417 | None:intergenic | 45.0% | |
AATCCTTGGTCGTGTAACAG+TGG | - | chr2.1:49329217-49329236 | MS.gene64416:intron | 45.0% | |
CAAGACAGAAGCAGAAGAAC+AGG | - | chr2.1:49328950-49328969 | MS.gene64416:CDS | 45.0% | |
CACTATCGAGACACGAGATT+TGG | - | chr2.1:49329731-49329750 | MS.gene64416:intron | 45.0% | |
CAGGTTCTCTAACAGTTCCA+TGG | + | chr2.1:49327041-49327060 | None:intergenic | 45.0% | |
CATGGAACTGTTAGAGAACC+TGG | - | chr2.1:49327039-49327058 | MS.gene64416:CDS | 45.0% | |
CCTACGATGGTCATAAATGG+AGG | + | chr2.1:49327451-49327470 | None:intergenic | 45.0% | |
CCTCCATTTATGACCATCGT+AGG | - | chr2.1:49327448-49327467 | MS.gene64416:intron | 45.0% | |
CGAAACACCGACAGATTCAA+CGG | + | chr2.1:49330238-49330257 | None:intergenic | 45.0% | |
CTGTTCTTCTGCTTCTGTCT+TGG | + | chr2.1:49328952-49328971 | None:intergenic | 45.0% | |
CTTAGAAGGCCATGACTCAT+TGG | - | chr2.1:49329605-49329624 | MS.gene64416:intron | 45.0% | |
TAACTTGATATGTCACCGCG+TGG | - | chr2.1:49328380-49328399 | MS.gene64416:CDS | 45.0% | |
TATCGAGACACGAGATTTGG+TGG | - | chr2.1:49329734-49329753 | MS.gene64416:intron | 45.0% | |
TCTGTGTCAATGTCCTACGA+TGG | + | chr2.1:49327464-49327483 | None:intergenic | 45.0% | |
TGTCAGTGTCGTGTCAATGT+CGG | + | chr2.1:49330156-49330175 | None:intergenic | 45.0% | |
TTGGAATTTCAGGCCATTGG+AGG | - | chr2.1:49330375-49330394 | MS.gene64416:CDS | 45.0% | |
! | CTGGTGTCTTTTCACCATGA+AGG | + | chr2.1:49328417-49328436 | None:intergenic | 45.0% |
! | GGTACAACTGTTGAAGGTAC+AGG | + | chr2.1:49328318-49328337 | None:intergenic | 45.0% |
!! | TGGCATAAGAGTACCAGTTC+TGG | + | chr2.1:49328932-49328951 | None:intergenic | 45.0% |
!! | AAAAAAAATTGAAAATTAAT+AGG | + | chr2.1:49327087-49327106 | None:intergenic | 5.0% |
AAGGTGTGTGTAACTGGAGC+AGG | - | chr2.1:49326961-49326980 | MS.gene64416:CDS | 50.0% | |
AGTGATTGAGCCTGCAGTGA+AGG | - | chr2.1:49328560-49328579 | MS.gene64416:intron | 50.0% | |
CAGGAGGGTTTGTAGCATCA+TGG | - | chr2.1:49326980-49326999 | MS.gene64416:CDS | 50.0% | |
CCACCTGCAGATTAAGCTTC+AGG | + | chr2.1:49328539-49328558 | None:intergenic | 50.0% | |
CCTGAAGCTTAATCTGCAGG+TGG | - | chr2.1:49328536-49328555 | MS.gene64416:intron | 50.0% | |
CTCGTGTCCGTTGAATCTGT+CGG | - | chr2.1:49330228-49330247 | MS.gene64416:intron | 50.0% | |
CTTCGCATGTGATCCAGAAC+TGG | - | chr2.1:49328916-49328935 | MS.gene64416:intron | 50.0% | |
GGGTTGGAATTTCAGGCCAT+TGG | - | chr2.1:49330372-49330391 | MS.gene64416:CDS | 50.0% | |
GTCGTGTCAATGTCGGACAA+GGG | + | chr2.1:49330149-49330168 | None:intergenic | 50.0% | |
GTGATTGAGCCTGCAGTGAA+GGG | - | chr2.1:49328561-49328580 | MS.gene64416:intron | 50.0% | |
GTTGAGAGCTATAAGGAGGC+TGG | - | chr2.1:49330415-49330434 | MS.gene64416:CDS | 50.0% | |
TATAACGGTGAAGCGGGTAG+TGG | + | chr2.1:49329406-49329425 | None:intergenic | 50.0% | |
TGTCGTGTCAATGTCGGACA+AGG | + | chr2.1:49330150-49330169 | None:intergenic | 50.0% | |
TGTGTGTAACTGGAGCAGGA+GGG | - | chr2.1:49326965-49326984 | MS.gene64416:CDS | 50.0% | |
TTAGCAGTTCCCTTCACTGC+AGG | + | chr2.1:49328573-49328592 | None:intergenic | 50.0% | |
TTCGGACTACCTGCAGTTGT+CGG | + | chr2.1:49328168-49328187 | None:intergenic | 50.0% | |
! | AAGGTACAGGGCTAGCAACA+TGG | + | chr2.1:49328305-49328324 | None:intergenic | 50.0% |
ACGCCACTGTTACACGACCA+AGG | + | chr2.1:49329223-49329242 | None:intergenic | 55.0% | |
AGCGTATGTCCGACAACTGC+AGG | - | chr2.1:49328156-49328175 | MS.gene64416:intron | 55.0% | |
GTGTGTGTAACTGGAGCAGG+AGG | - | chr2.1:49326964-49326983 | MS.gene64416:CDS | 55.0% | |
! | CGGTGAAGCGGGTAGTGGTA+TGG | + | chr2.1:49329401-49329420 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 49326928 | 49330456 | 49326928 | ID=MS.gene64416 |
chr2.1 | mRNA | 49326928 | 49330456 | 49326928 | ID=MS.gene64416.t1;Parent=MS.gene64416 |
chr2.1 | exon | 49330324 | 49330456 | 49330324 | ID=MS.gene64416.t1.exon1;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49330324 | 49330456 | 49330324 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
chr2.1 | exon | 49329037 | 49329206 | 49329037 | ID=MS.gene64416.t1.exon2;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49329037 | 49329206 | 49329037 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
chr2.1 | exon | 49328949 | 49328975 | 49328949 | ID=MS.gene64416.t1.exon3;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49328949 | 49328975 | 49328949 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
chr2.1 | exon | 49328289 | 49328451 | 49328289 | ID=MS.gene64416.t1.exon4;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49328289 | 49328451 | 49328289 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
chr2.1 | exon | 49327585 | 49327774 | 49327585 | ID=MS.gene64416.t1.exon5;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49327585 | 49327774 | 49327585 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
chr2.1 | exon | 49326928 | 49327066 | 49326928 | ID=MS.gene64416.t1.exon6;Parent=MS.gene64416.t1 |
chr2.1 | CDS | 49326928 | 49327066 | 49326928 | ID=cds.MS.gene64416.t1;Parent=MS.gene64416.t1 |
Gene Sequence |
Protein sequence |