Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65325.t1 | XP_003612356.1 | 99 | 388 | 4 | 0 | 4 | 391 | 3 | 390 | 2.60E-222 | 781.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65325.t1 | Q42807 | 91.0 | 388 | 33 | 1 | 4 | 391 | 3 | 388 | 1.5e-207 | 723.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65325.t1 | Q4U601 | 99.0 | 388 | 4 | 0 | 4 | 391 | 3 | 390 | 1.9e-222 | 781.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene054155 | MS.gene65325 | PPI |
| MS.gene65325 | MS.gene32324 | PPI |
| MS.gene65325 | MS.gene31844 | PPI |
| MS.gene65325 | MS.gene026689 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65325.t1 | MTR_5g024130 | 98.969 | 388 | 4 | 0 | 4 | 391 | 3 | 390 | 0.0 | 802 |
| MS.gene65325.t1 | MTR_4g087440 | 97.938 | 388 | 8 | 0 | 4 | 391 | 3 | 390 | 0.0 | 793 |
| MS.gene65325.t1 | MTR_1g029150 | 71.726 | 336 | 91 | 2 | 60 | 391 | 52 | 387 | 0.0 | 519 |
| MS.gene65325.t1 | MTR_3g090100 | 64.000 | 350 | 114 | 4 | 46 | 391 | 22 | 363 | 3.55e-166 | 472 |
| MS.gene65325.t1 | MTR_3g089025 | 65.179 | 336 | 114 | 2 | 58 | 391 | 32 | 366 | 2.24e-165 | 470 |
| MS.gene65325.t1 | MTR_3g090020 | 63.506 | 348 | 119 | 3 | 46 | 391 | 22 | 363 | 1.39e-163 | 465 |
| MS.gene65325.t1 | MTR_3g090010 | 65.569 | 334 | 112 | 2 | 60 | 391 | 35 | 367 | 3.06e-162 | 462 |
| MS.gene65325.t1 | MTR_3g090110 | 40.171 | 117 | 47 | 1 | 238 | 354 | 2 | 95 | 1.57e-21 | 89.7 |
| MS.gene65325.t1 | MTR_3g089980 | 47.423 | 97 | 38 | 1 | 258 | 354 | 7 | 90 | 2.06e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65325.t1 | AT2G43710 | 81.679 | 393 | 67 | 2 | 3 | 391 | 7 | 398 | 0.0 | 666 |
| MS.gene65325.t1 | AT2G43710 | 81.425 | 393 | 68 | 2 | 3 | 391 | 7 | 398 | 0.0 | 664 |
| MS.gene65325.t1 | AT3G02630 | 80.654 | 367 | 70 | 1 | 25 | 390 | 26 | 392 | 0.0 | 633 |
| MS.gene65325.t1 | AT5G16240 | 77.159 | 359 | 79 | 2 | 34 | 391 | 35 | 391 | 0.0 | 591 |
| MS.gene65325.t1 | AT3G02610 | 68.090 | 398 | 112 | 6 | 3 | 391 | 19 | 410 | 0.0 | 546 |
| MS.gene65325.t1 | AT3G02610 | 68.090 | 398 | 112 | 6 | 3 | 391 | 17 | 408 | 0.0 | 545 |
| MS.gene65325.t1 | AT5G16230 | 65.327 | 398 | 133 | 4 | 1 | 393 | 3 | 400 | 0.0 | 533 |
| MS.gene65325.t1 | AT3G02620 | 68.085 | 376 | 108 | 4 | 22 | 391 | 34 | 403 | 0.0 | 531 |
| MS.gene65325.t1 | AT3G02620 | 68.085 | 376 | 108 | 4 | 22 | 391 | 31 | 400 | 0.0 | 531 |
| MS.gene65325.t1 | AT1G43800 | 65.625 | 384 | 121 | 4 | 15 | 391 | 9 | 388 | 0.0 | 516 |
| MS.gene65325.t1 | AT5G16230 | 73.457 | 324 | 82 | 3 | 74 | 393 | 1 | 324 | 1.52e-177 | 499 |
| MS.gene65325.t1 | AT3G02620 | 72.840 | 324 | 82 | 3 | 74 | 391 | 1 | 324 | 2.96e-176 | 496 |
Find 146 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAAATTTCAATCTTT+TGG | 0.153941 | 5.2:+15053556 | None:intergenic |
| TCCTCCAGCCTTCTGATTCT+TGG | 0.181095 | 5.2:+15052349 | None:intergenic |
| AACACTTCTCCACAGGTTTA+AGG | 0.192815 | 5.2:+15053496 | None:intergenic |
| GCCCTACTCCCTGGGCTATT+TGG | 0.216121 | 5.2:-15053275 | MS.gene65325:CDS |
| GGTGGAAGCCATGAGGAATT+TGG | 0.217183 | 5.2:+15054783 | None:intergenic |
| GCCGACATAACCGGACTTTC+AGG | 0.282345 | 5.2:-15052412 | MS.gene65325:CDS |
| CATTCAGTTGGATTCATGAT+AGG | 0.310680 | 5.2:-15052288 | MS.gene65325:CDS |
| TACTTGAACATGCACTTCTC+TGG | 0.313192 | 5.2:+15053596 | None:intergenic |
| CCAAACTATGCTTAATACTT+TGG | 0.328282 | 5.2:-15053325 | MS.gene65325:CDS |
| AGGTTTAAGGTGAGTCAATA+AGG | 0.334045 | 5.2:+15053509 | None:intergenic |
| TTAAGCATAGTTTGGTAAGT+AGG | 0.345744 | 5.2:+15053333 | None:intergenic |
| AGATGACTACTTTGTTGTTC+TGG | 0.348048 | 5.2:-15053385 | MS.gene65325:CDS |
| AATCCAACTGAATGCAAGTT+TGG | 0.355409 | 5.2:+15052297 | None:intergenic |
| CCAAAGTATTAAGCATAGTT+TGG | 0.366292 | 5.2:+15053325 | None:intergenic |
| CTGCCTGATCCTTCCTCAGA+TGG | 0.373394 | 5.2:-15053456 | MS.gene65325:CDS |
| GCGTGCACAGCTGTGGATGC+AGG | 0.375281 | 5.2:-15050954 | MS.gene65325:CDS |
| TGTTGTTCTGGTTGGAGATA+TGG | 0.377751 | 5.2:-15053373 | MS.gene65325:CDS |
| GTGGAAGCCATGAGGAATTT+GGG | 0.381387 | 5.2:+15054784 | None:intergenic |
| AACAAGTATCTTTACTTGTC+CGG | 0.381953 | 5.2:-15053207 | MS.gene65325:CDS |
| GATATACTTGAGTTTCTAGT+TGG | 0.383465 | 5.2:-15052448 | MS.gene65325:CDS |
| AAGACAATTCAGTACTTGAT+TGG | 0.388415 | 5.2:-15053159 | MS.gene65325:CDS |
| TCTGTTAAGCATAAGCAATC+AGG | 0.396112 | 5.2:-15052139 | MS.gene65325:intron |
| AGGATGTTTGTGTAGGGAAA+GGG | 0.397504 | 5.2:+15054842 | None:intergenic |
| CAGCCTCCGGCGTGGAGGCA+AGG | 0.399036 | 5.2:-15050803 | MS.gene65325:CDS |
| AAAGATAGTGGAAAAGCTAT+TGG | 0.403395 | 5.2:-15052632 | MS.gene65325:CDS |
| CTCCTTCTCTCTCCCTCAAA+TGG | 0.406762 | 5.2:-15054821 | MS.gene65325:CDS |
| TTTCAAATCGTTGGACGGTT+GGG | 0.409114 | 5.2:-15053541 | MS.gene65325:CDS |
| ATTCAGTACTTGATTGGCTC+TGG | 0.422057 | 5.2:-15053153 | MS.gene65325:CDS |
| ATGGCTTCCACCCTCCGTTC+TGG | 0.424747 | 5.2:-15054772 | MS.gene65325:CDS |
| CATCCAAACTTGCATTCAGT+TGG | 0.428488 | 5.2:-15052300 | MS.gene65325:CDS |
| GACGGGGTTCGTGATGAAAC+AGG | 0.435583 | 5.2:-15053303 | MS.gene65325:CDS |
| TGGAAGGTGGCCGACATAAC+CGG | 0.441892 | 5.2:-15052421 | MS.gene65325:CDS |
| TCCAAATAGCCCAGGGAGTA+GGG | 0.449927 | 5.2:+15053274 | None:intergenic |
| AGAACAACAAAGTAGTCATC+TGG | 0.454468 | 5.2:+15053387 | None:intergenic |
| TGTGTTTCCATGCGATATAA+AGG | 0.456327 | 5.2:+15052747 | None:intergenic |
| CAGGTGCCAGCCCTACTCCC+TGG | 0.456573 | 5.2:-15053284 | MS.gene65325:CDS |
| CAGCAGAATAGTTATCAAAC+AGG | 0.457192 | 5.2:+15052512 | None:intergenic |
| AGAAGGAGGATGTTTGTGTA+GGG | 0.463532 | 5.2:+15054836 | None:intergenic |
| TCCAGCCTTCTGATTCTTGG+TGG | 0.465016 | 5.2:+15052352 | None:intergenic |
| TCGTCCCTCACCTGAAAGTC+CGG | 0.465890 | 5.2:+15052402 | None:intergenic |
| AGCCTCCGGCGTGGAGGCAA+GGG | 0.471797 | 5.2:-15050802 | MS.gene65325:CDS |
| TCTGCTGTTGCCCAGCGCAT+TGG | 0.472536 | 5.2:-15052496 | MS.gene65325:CDS |
| ACCACGTTCCTTAGCAAGCC+TGG | 0.476409 | 5.2:+15052723 | None:intergenic |
| CAGTGTAGACTCCAATGCGC+TGG | 0.478141 | 5.2:+15052485 | None:intergenic |
| GTGTAGATAAAGCCAAGGTA+AGG | 0.480370 | 5.2:+15052790 | None:intergenic |
| GGATGTTTGTGTAGGGAAAG+GGG | 0.481333 | 5.2:+15054843 | None:intergenic |
| TATCGCATGGAAACACAGCC+AGG | 0.484282 | 5.2:-15052741 | MS.gene65325:CDS |
| GATCTGAGACTGGCCATTTG+AGG | 0.486343 | 5.2:+15054808 | None:intergenic |
| GACTACTTTGTTGTTCTGGT+TGG | 0.487848 | 5.2:-15053381 | MS.gene65325:CDS |
| CTATGCTTAATACTTTGGAC+GGG | 0.489694 | 5.2:-15053320 | MS.gene65325:CDS |
| GGTTGCCAACACTTCTCCAC+AGG | 0.491806 | 5.2:+15053489 | None:intergenic |
| AAGGCACAGGAGTATGTTTG+TGG | 0.492271 | 5.2:-15052379 | MS.gene65325:CDS |
| GAGAAGGAGGATGTTTGTGT+AGG | 0.492943 | 5.2:+15054835 | None:intergenic |
| TTGAGTTTCTAGTTGGGAAG+TGG | 0.493399 | 5.2:-15052441 | MS.gene65325:CDS |
| CAGGCTCCGACGCAGAGGTA+AGG | 0.502239 | 5.2:-15050935 | MS.gene65325:CDS |
| CGTCTCGGCCATCATACATC+AGG | 0.503492 | 5.2:+15052539 | None:intergenic |
| AAAGCAATAACTGTTCCATC+AGG | 0.503808 | 5.2:+15052601 | None:intergenic |
| ATCGTTGGACGGTTGGGCTG+AGG | 0.504685 | 5.2:-15053535 | MS.gene65325:CDS |
| TATCAAACAGGTTGTCGTCT+CGG | 0.505744 | 5.2:+15052524 | None:intergenic |
| GACTGCTTACACAAAGATAG+TGG | 0.506240 | 5.2:-15052644 | MS.gene65325:CDS |
| ATCTGAGACTGGCCATTTGA+GGG | 0.507077 | 5.2:+15054809 | None:intergenic |
| CCATCATACATCAGGTGTGC+TGG | 0.507354 | 5.2:+15052547 | None:intergenic |
| ATTCAGTTGGATTCATGATA+GGG | 0.509293 | 5.2:-15052287 | MS.gene65325:CDS |
| AATCCATCTGAGGAAGGATC+AGG | 0.510617 | 5.2:+15053453 | None:intergenic |
| TGCCCTTGTCCAAATAGCCC+AGG | 0.513839 | 5.2:+15053266 | None:intergenic |
| ACTATGCTTAATACTTTGGA+CGG | 0.515306 | 5.2:-15053321 | MS.gene65325:CDS |
| GTCCAAATAGCCCAGGGAGT+AGG | 0.517699 | 5.2:+15053273 | None:intergenic |
| CTGTTAAGCATAAGCAATCA+GGG | 0.518257 | 5.2:-15052138 | MS.gene65325:intron |
| AAGCTGCTTCACAAGGTATG+AGG | 0.519635 | 5.2:-15050979 | MS.gene65325:CDS |
| CTCCCTGGGCTATTTGGACA+AGG | 0.522312 | 5.2:-15053269 | MS.gene65325:CDS |
| GGAACGTGGTGATTTGAAGT+TGG | 0.522918 | 5.2:-15052710 | MS.gene65325:CDS |
| AGGTGCCAGCCCTACTCCCT+GGG | 0.525825 | 5.2:-15053283 | MS.gene65325:CDS |
| CTACACTTCATTTCAAGAGA+GGG | 0.526696 | 5.2:-15052773 | MS.gene65325:CDS |
| AATAGCCCAGGGAGTAGGGC+TGG | 0.527579 | 5.2:+15053278 | None:intergenic |
| ATATACTTGAGTTTCTAGTT+GGG | 0.527996 | 5.2:-15052447 | MS.gene65325:CDS |
| GTACTTGATTGGCTCTGGAA+TGG | 0.532321 | 5.2:-15053148 | MS.gene65325:intron |
| GGGCTATTTGGACAAGGGCA+TGG | 0.532896 | 5.2:-15053263 | MS.gene65325:CDS |
| TTGTCTCATATCAACACGTC+CGG | 0.538054 | 5.2:+15053188 | None:intergenic |
| ACTTGAACATGCACTTCTCT+GGG | 0.540588 | 5.2:+15053597 | None:intergenic |
| GCCACCAAGAATCAGAAGGC+TGG | 0.541195 | 5.2:-15052353 | MS.gene65325:CDS |
| GGTGGCAGCCTCCGGCGTGG+AGG | 0.545212 | 5.2:-15050808 | MS.gene65325:intron |
| GGAGAAGTGTTGGCAACCAC+AGG | 0.545456 | 5.2:-15053484 | MS.gene65325:CDS |
| AGGTGAGGGACGAAAGGCAC+AGG | 0.547789 | 5.2:-15052392 | MS.gene65325:CDS |
| ACCTGAAAGTCCGGTTATGT+CGG | 0.554587 | 5.2:+15052411 | None:intergenic |
| AGCCCTTGCCTCCACGCCGG+AGG | 0.554878 | 5.2:+15050800 | None:intergenic |
| TTGAAGTTGGCTCAGATCTG+TGG | 0.557237 | 5.2:-15052697 | MS.gene65325:CDS |
| AGGGCGACCTTTATATCGCA+TGG | 0.560815 | 5.2:-15052754 | MS.gene65325:CDS |
| GAGGATGTTTGTGTAGGGAA+AGG | 0.563996 | 5.2:+15054841 | None:intergenic |
| CAGATCTCCCAAATTCCTCA+TGG | 0.570557 | 5.2:-15054791 | MS.gene65325:CDS |
| AGTGTAGACTCCAATGCGCT+GGG | 0.573443 | 5.2:+15052486 | None:intergenic |
| AAGTGAAGGAACTGAGAGAG+AGG | 0.573671 | 5.2:-15053422 | MS.gene65325:CDS |
| AGGCACAGGAGTATGTTTGT+GGG | 0.574102 | 5.2:-15052378 | MS.gene65325:CDS |
| AAGTATATCAGCATAGTCCT+TGG | 0.575108 | 5.2:+15052462 | None:intergenic |
| GAATTTGGGAGATCTGAGAC+TGG | 0.578274 | 5.2:+15054798 | None:intergenic |
| TTAAACCTGTGGAGAAGTGT+TGG | 0.579690 | 5.2:-15053494 | MS.gene65325:CDS |
| TCTACACTTCATTTCAAGAG+AGG | 0.581234 | 5.2:-15052774 | MS.gene65325:CDS |
| TAATTCTAAGCTGCTTCACA+AGG | 0.588919 | 5.2:-15050986 | MS.gene65325:CDS |
| GGCCATTTGAGGGAGAGAGA+AGG | 0.589016 | 5.2:+15054819 | None:intergenic |
| CATTTGAGGGAGAGAGAAGG+AGG | 0.590783 | 5.2:+15054822 | None:intergenic |
| GAGAGCTTCAGCAAGAGCAA+AGG | 0.595934 | 5.2:-15052326 | MS.gene65325:CDS |
| AAACACAGCCAGGCTTGCTA+AGG | 0.597013 | 5.2:-15052731 | MS.gene65325:CDS |
| GTTTCTAGTTGGGAAGTGGA+AGG | 0.597631 | 5.2:-15052437 | MS.gene65325:CDS |
| TGTAGATAAAGCCAAGGTAA+GGG | 0.598444 | 5.2:+15052791 | None:intergenic |
| GCTCCGACGCAGAGGTAAGG+TGG | 0.601040 | 5.2:-15050932 | MS.gene65325:CDS |
| AATTTGATGGATAGGATCCT+CGG | 0.609645 | 5.2:-15052825 | MS.gene65325:intron |
| ACTTTCAGGTGAGGGACGAA+AGG | 0.610348 | 5.2:-15052398 | MS.gene65325:CDS |
| AGAAGCCCTTGCCTCCACGC+CGG | 0.611961 | 5.2:+15050797 | None:intergenic |
| CCAGCACACCTGATGTATGA+TGG | 0.611997 | 5.2:-15052547 | MS.gene65325:CDS |
| CTATTGGAGATTGATCCTGA+TGG | 0.612852 | 5.2:-15052616 | MS.gene65325:CDS |
| TCTAGTTGGGAAGTGGAAGG+TGG | 0.613838 | 5.2:-15052434 | MS.gene65325:CDS |
| TCTTCGAATCCATCTGAGGA+AGG | 0.617698 | 5.2:+15053447 | None:intergenic |
| GCCCTTGTCCAAATAGCCCA+GGG | 0.621824 | 5.2:+15053267 | None:intergenic |
| TATGGTGGCAGCCTCCGGCG+TGG | 0.622758 | 5.2:-15050811 | MS.gene65325:intron |
| AGTGAAGGAACTGAGAGAGA+GGG | 0.623958 | 5.2:-15053421 | MS.gene65325:CDS |
| ACTGAGAATAGCCCTTACCT+TGG | 0.627826 | 5.2:-15052802 | MS.gene65325:CDS |
| TAGAAATATATACTGGAGCA+CGG | 0.627906 | 5.2:+15050908 | None:intergenic |
| TGACTTGGAACCAGAACGGA+GGG | 0.629360 | 5.2:+15054762 | None:intergenic |
| ATGAAGTGTAGATAAAGCCA+AGG | 0.630791 | 5.2:+15052785 | None:intergenic |
| TTGCTCTTCGAATCCATCTG+AGG | 0.631251 | 5.2:+15053443 | None:intergenic |
| TGAGGCAGCGTGCACAGCTG+TGG | 0.632974 | 5.2:-15050961 | MS.gene65325:CDS |
| ATTGACTCACCTTAAACCTG+TGG | 0.633294 | 5.2:-15053505 | MS.gene65325:CDS |
| TCTTTGTGTAAGCAGTCTCA+TGG | 0.635579 | 5.2:+15052650 | None:intergenic |
| CTTGGAACCAGAACGGAGGG+TGG | 0.638218 | 5.2:+15054765 | None:intergenic |
| TGGATTCGAAGAGCAAGTGA+AGG | 0.638840 | 5.2:-15053436 | MS.gene65325:CDS |
| CATTGGAGTCTACACTGCCA+AGG | 0.641019 | 5.2:-15052479 | MS.gene65325:CDS |
| GGTTGCCACCAAGAATCAGA+AGG | 0.645168 | 5.2:-15052357 | MS.gene65325:CDS |
| GCCAGGCTTGCTAAGGAACG+TGG | 0.645565 | 5.2:-15052724 | MS.gene65325:CDS |
| AGAGGTTGAAAATATTAACA+AGG | 0.647622 | 5.2:-15053631 | MS.gene65325:CDS |
| TATGCTTAATACTTTGGACG+GGG | 0.647926 | 5.2:-15053319 | MS.gene65325:CDS |
| GGATGCAGGCTCCGACGCAG+AGG | 0.653972 | 5.2:-15050940 | MS.gene65325:CDS |
| GGACCACCTTACCTCTGCGT+CGG | 0.656178 | 5.2:+15050929 | None:intergenic |
| GGGAAAGGGGTTGCTCTGAG+AGG | 0.657951 | 5.2:+15054856 | None:intergenic |
| TCCCTGGGCTATTTGGACAA+GGG | 0.661918 | 5.2:-15053268 | MS.gene65325:CDS |
| ATAACCGGACTTTCAGGTGA+GGG | 0.664241 | 5.2:-15052406 | MS.gene65325:CDS |
| ACCAAGAATCAGAAGGCTGG+AGG | 0.675099 | 5.2:-15052350 | MS.gene65325:CDS |
| TTACTGACTTGGAACCAGAA+CGG | 0.677723 | 5.2:+15054758 | None:intergenic |
| TAAGGGCTATTCTCAGTCCG+AGG | 0.684437 | 5.2:+15052808 | None:intergenic |
| AGCAGCTTAGAATTAAAACA+TGG | 0.685073 | 5.2:+15050994 | None:intergenic |
| CATAACCGGACTTTCAGGTG+AGG | 0.689606 | 5.2:-15052407 | MS.gene65325:CDS |
| GTTAAGCATAAGCAATCAGG+GGG | 0.690132 | 5.2:-15052136 | MS.gene65325:intron |
| AACGGAGGGTGGAAGCCATG+AGG | 0.693929 | 5.2:+15054776 | None:intergenic |
| TGTTAAGCATAAGCAATCAG+GGG | 0.694067 | 5.2:-15052137 | MS.gene65325:intron |
| TGAACATGCACTTCTCTGGG+AGG | 0.699562 | 5.2:+15053600 | None:intergenic |
| CTGACTTGGAACCAGAACGG+AGG | 0.718153 | 5.2:+15054761 | None:intergenic |
| GGATCAGGCAGAAAATCCTG+TGG | 0.729854 | 5.2:+15053468 | None:intergenic |
| ACAGCTGAAGAAAATAGACA+CGG | 0.759947 | 5.2:-15053240 | MS.gene65325:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATCATTATTTTTTTAAC+AGG | + | chr5.2:15051913-15051932 | None:intergenic | 10.0% |
| !!! | GTATAATCAATTATAAATTT+TGG | - | chr5.2:15051389-15051408 | MS.gene65325:intron | 10.0% |
| !! | AAATTTCGAAATTGAATTTA+TGG | + | chr5.2:15051330-15051349 | None:intergenic | 15.0% |
| !! | AATTTATTATGAAACTAACT+AGG | + | chr5.2:15052541-15052560 | None:intergenic | 15.0% |
| !! | GATAAAGAAAATTTAGTTAA+TGG | - | chr5.2:15053641-15053660 | MS.gene65325:intron | 15.0% |
| !! | TAAATTATTACTATCATTCA+TGG | + | chr5.2:15051869-15051888 | None:intergenic | 15.0% |
| !!! | ATTTGAAAATTTCAATCTTT+TGG | + | chr5.2:15052104-15052123 | None:intergenic | 15.0% |
| !!! | TTTGAAAATTTCAATCTTTT+GGG | + | chr5.2:15052103-15052122 | None:intergenic | 15.0% |
| !! | AAAAATACTGAACTTAATTC+TGG | - | chr5.2:15051611-15051630 | MS.gene65325:intron | 20.0% |
| !! | AAGATGAAATGAAAAAGTAA+GGG | + | chr5.2:15050931-15050950 | None:intergenic | 20.0% |
| !! | ATAATGATATTAATACAGTC+TGG | - | chr5.2:15051922-15051941 | MS.gene65325:intron | 20.0% |
| !! | CAATCAAAAAAACAAAACTA+AGG | + | chr5.2:15051268-15051287 | None:intergenic | 20.0% |
| !! | TAGATGTCATAAAAAAGAAT+CGG | + | chr5.2:15051715-15051734 | None:intergenic | 20.0% |
| !! | TATCTTGACATTTGTATAAA+TGG | - | chr5.2:15054588-15054607 | MS.gene65325:intron | 20.0% |
| !! | TATTAATCAACAATTCACAA+AGG | - | chr5.2:15053906-15053925 | MS.gene65325:intron | 20.0% |
| !! | TTTGTGATATGATATTGAAA+TGG | - | chr5.2:15051013-15051032 | MS.gene65325:intron | 20.0% |
| !!! | GTTTTTTTGATTGTATTCTA+TGG | - | chr5.2:15051275-15051294 | MS.gene65325:intron | 20.0% |
| !!! | TATAAATTTTGGAACTTGTT+GGG | - | chr5.2:15051400-15051419 | MS.gene65325:intron | 20.0% |
| !!! | TGTTTATATCTCTCTAATTT+TGG | - | chr5.2:15052801-15052820 | MS.gene65325:CDS | 20.0% |
| !!! | TTATAAATTTTGGAACTTGT+TGG | - | chr5.2:15051399-15051418 | MS.gene65325:intron | 20.0% |
| !!! | TTGAAAATTTCAATCTTTTG+GGG | + | chr5.2:15052102-15052121 | None:intergenic | 20.0% |
| !!! | TTTCATATTATCACTTGTTA+TGG | - | chr5.2:15051148-15051167 | MS.gene65325:intron | 20.0% |
| !!! | TTTGTGAATTGTTGATTAAT+AGG | + | chr5.2:15053907-15053926 | None:intergenic | 20.0% |
| ! | AAGTTGAGAACGAAATTTAA+GGG | + | chr5.2:15054466-15054485 | None:intergenic | 25.0% |
| ! | ACTATAAACATGTGATGAAA+AGG | + | chr5.2:15053849-15053868 | None:intergenic | 25.0% |
| ! | AGAGGTTGAAAATATTAACA+AGG | - | chr5.2:15052026-15052045 | MS.gene65325:intron | 25.0% |
| ! | AGTTCATCAAAATGACAATT+TGG | + | chr5.2:15051819-15051838 | None:intergenic | 25.0% |
| ! | CATAATCATGCAAATGTTAA+AGG | - | chr5.2:15052562-15052581 | MS.gene65325:CDS | 25.0% |
| ! | CTTTAACATTTGCATGATTA+TGG | + | chr5.2:15052564-15052583 | None:intergenic | 25.0% |
| ! | GAAGATGAAATGAAAAAGTA+AGG | + | chr5.2:15050932-15050951 | None:intergenic | 25.0% |
| ! | GAAGATGTAGAAATATATAC+TGG | + | chr5.2:15054759-15054778 | None:intergenic | 25.0% |
| ! | GAATCAAATTGTGGAATATA+TGG | + | chr5.2:15054051-15054070 | None:intergenic | 25.0% |
| ! | GATTCTATTTCCTCAAATTA+AGG | - | chr5.2:15054066-15054085 | MS.gene65325:intron | 25.0% |
| ! | TAAAAAAGAATCGGTAAACA+TGG | + | chr5.2:15051706-15051725 | None:intergenic | 25.0% |
| ! | TTAATCAATCAAATCACTAG+AGG | + | chr5.2:15051757-15051776 | None:intergenic | 25.0% |
| ! | TTGAAATTCAAATCTTCACT+AGG | - | chr5.2:15054002-15054021 | MS.gene65325:intron | 25.0% |
| ! | TTGATTAACCTATGCATTTA+TGG | - | chr5.2:15051769-15051788 | MS.gene65325:intron | 25.0% |
| ! | TTTAAGGGAATTTAAGAGAA+AGG | + | chr5.2:15054451-15054470 | None:intergenic | 25.0% |
| !! | ATGTTCATTTGAAACTTTGA+GGG | + | chr5.2:15054127-15054146 | None:intergenic | 25.0% |
| !! | GATTGAAATTTTCAAATCGT+TGG | - | chr5.2:15052107-15052126 | MS.gene65325:intron | 25.0% |
| !! | GTGAATTTGATAACTGTTTA+CGG | - | chr5.2:15051510-15051529 | MS.gene65325:intron | 25.0% |
| !! | TTTTATATTACTTTGCAGAG+AGG | - | chr5.2:15052008-15052027 | MS.gene65325:intron | 25.0% |
| !!! | ATATACTTGAGTTTCTAGTT+GGG | - | chr5.2:15053210-15053229 | MS.gene65325:CDS | 25.0% |
| !!! | ATTTAGCTACTTTTAGCTTT+CGG | - | chr5.2:15053936-15053955 | MS.gene65325:intron | 25.0% |
| !!! | CTTTTTTATGACATCTACAT+GGG | - | chr5.2:15051718-15051737 | MS.gene65325:intron | 25.0% |
| !!! | TCTTTTTTATGACATCTACA+TGG | - | chr5.2:15051717-15051736 | MS.gene65325:intron | 25.0% |
| !!! | TGTTTTGAATTTCTAGAACA+AGG | - | chr5.2:15052713-15052732 | MS.gene65325:CDS | 25.0% |
| !!! | TTTAAAGGCAATTTTGATTG+CGG | - | chr5.2:15053686-15053705 | MS.gene65325:intron | 25.0% |
| !!! | TTTTTTTTTTCCTTCTTTGC+AGG | - | chr5.2:15051054-15051073 | MS.gene65325:intron | 25.0% |
| AACAAGTATCTTTACTTGTC+CGG | - | chr5.2:15052450-15052469 | MS.gene65325:CDS | 30.0% | |
| AAGACAATTCAGTACTTGAT+TGG | - | chr5.2:15052498-15052517 | MS.gene65325:CDS | 30.0% | |
| ACTATGCTTAATACTTTGGA+CGG | - | chr5.2:15052336-15052355 | MS.gene65325:CDS | 30.0% | |
| AGCAGCTTAGAATTAAAACA+TGG | + | chr5.2:15054666-15054685 | None:intergenic | 30.0% | |
| ATATCACTACTACAAGGAAA+AGG | + | chr5.2:15053580-15053599 | None:intergenic | 30.0% | |
| ATGATAGATGCTAATCTGAT+GGG | + | chr5.2:15054419-15054438 | None:intergenic | 30.0% | |
| ATTCAGTTGGATTCATGATA+GGG | - | chr5.2:15053370-15053389 | MS.gene65325:CDS | 30.0% | |
| CAAACGTAAGGTCATTTAAA+TGG | - | chr5.2:15051959-15051978 | MS.gene65325:intron | 30.0% | |
| CCAAACTATGCTTAATACTT+TGG | - | chr5.2:15052332-15052351 | MS.gene65325:CDS | 30.0% | |
| CTGATACTAGAGAAAAACAT+CGG | + | chr5.2:15051241-15051260 | None:intergenic | 30.0% | |
| CTTTCTTTGTGCAGAAAAAA+TGG | - | chr5.2:15054266-15054285 | MS.gene65325:intron | 30.0% | |
| GAAATGAAAAAGTAAGGGAA+GGG | + | chr5.2:15050926-15050945 | None:intergenic | 30.0% | |
| GAAGTTGAGAACGAAATTTA+AGG | + | chr5.2:15054467-15054486 | None:intergenic | 30.0% | |
| GAGGAAATAGAATCAAATTG+TGG | + | chr5.2:15054060-15054079 | None:intergenic | 30.0% | |
| GCAATCAAAATTGCCTTTAA+AGG | + | chr5.2:15053687-15053706 | None:intergenic | 30.0% | |
| TAAATCAATTCGCAAACGTA+AGG | - | chr5.2:15051947-15051966 | MS.gene65325:intron | 30.0% | |
| TACAGAGAATGTGCTTAAAA+TGG | - | chr5.2:15052620-15052639 | MS.gene65325:CDS | 30.0% | |
| TAGAAATATATACTGGAGCA+CGG | + | chr5.2:15054752-15054771 | None:intergenic | 30.0% | |
| TCATTGGAATAAGGCTATAT+TGG | - | chr5.2:15053796-15053815 | MS.gene65325:intron | 30.0% | |
| TGAAACATATCACTACTACA+AGG | + | chr5.2:15053586-15053605 | None:intergenic | 30.0% | |
| TGAAATGAAAAAGTAAGGGA+AGG | + | chr5.2:15050927-15050946 | None:intergenic | 30.0% | |
| TGAGTCAAGAATGAATTTCA+TGG | + | chr5.2:15052747-15052766 | None:intergenic | 30.0% | |
| TGATAACTGTTTACGGAAAT+TGG | - | chr5.2:15051517-15051536 | MS.gene65325:intron | 30.0% | |
| TGATACTAGAGAAAAACATC+GGG | + | chr5.2:15051240-15051259 | None:intergenic | 30.0% | |
| TTAAGCATAGTTTGGTAAGT+AGG | + | chr5.2:15052327-15052346 | None:intergenic | 30.0% | |
| TTGTCCTTTATTCTTCTTTG+CGG | - | chr5.2:15053719-15053738 | MS.gene65325:intron | 30.0% | |
| TTTGGATTGATGGAATTTGA+TGG | - | chr5.2:15052819-15052838 | MS.gene65325:intron | 30.0% | |
| ! | ATTGATGGAATTTGATGGAT+AGG | - | chr5.2:15052824-15052843 | MS.gene65325:intron | 30.0% |
| ! | CCAAAGTATTAAGCATAGTT+TGG | + | chr5.2:15052335-15052354 | None:intergenic | 30.0% |
| ! | GAAATTTTCAAATCGTTGGA+CGG | - | chr5.2:15052111-15052130 | MS.gene65325:intron | 30.0% |
| ! | GATGTTCATTTGAAACTTTG+AGG | + | chr5.2:15054128-15054147 | None:intergenic | 30.0% |
| ! | GTGAATTGTTGATTAATAGG+TGG | + | chr5.2:15053904-15053923 | None:intergenic | 30.0% |
| ! | TCTCTCTAATTTTGGATTGA+TGG | - | chr5.2:15052809-15052828 | MS.gene65325:CDS | 30.0% |
| !! | AAAATTTCAATCTTTTGGGG+AGG | + | chr5.2:15052099-15052118 | None:intergenic | 30.0% |
| !! | AAAGATAGTGGAAAAGCTAT+TGG | - | chr5.2:15053025-15053044 | MS.gene65325:intron | 30.0% |
| !! | CATTTTGATGAACTCTACAT+GGG | - | chr5.2:15051825-15051844 | MS.gene65325:intron | 30.0% |
| !! | GATATACTTGAGTTTCTAGT+TGG | - | chr5.2:15053209-15053228 | MS.gene65325:CDS | 30.0% |
| !! | TCATTTTGATGAACTCTACA+TGG | - | chr5.2:15051824-15051843 | MS.gene65325:intron | 30.0% |
| AAAGCAATAACTGTTCCATC+AGG | + | chr5.2:15053059-15053078 | None:intergenic | 35.0% | |
| AACTTCACTGAATCTGTTCA+TGG | - | chr5.2:15054481-15054500 | MS.gene65325:intron | 35.0% | |
| AAGTATATCAGCATAGTCCT+TGG | + | chr5.2:15053198-15053217 | None:intergenic | 35.0% | |
| AATCCAACTGAATGCAAGTT+TGG | + | chr5.2:15053363-15053382 | None:intergenic | 35.0% | |
| AATGAAGGATGTAGAATGAG+AGG | + | chr5.2:15054151-15054170 | None:intergenic | 35.0% | |
| AATTTATGGTGAAGTCACCT+AGG | + | chr5.2:15051316-15051335 | None:intergenic | 35.0% | |
| ACAGCTGAAGAAAATAGACA+CGG | - | chr5.2:15052417-15052436 | MS.gene65325:CDS | 35.0% | |
| ACTATGAAAGAGAAGAGAAG+AGG | + | chr5.2:15054233-15054252 | None:intergenic | 35.0% | |
| AGAACAACAAAGTAGTCATC+TGG | + | chr5.2:15052273-15052292 | None:intergenic | 35.0% | |
| ATGAAGGATGTAGAATGAGA+GGG | + | chr5.2:15054150-15054169 | None:intergenic | 35.0% | |
| ATGAAGTGTAGATAAAGCCA+AGG | + | chr5.2:15052875-15052894 | None:intergenic | 35.0% | |
| ATGCGTGAAAAGTCCTTTAA+AGG | - | chr5.2:15053671-15053690 | MS.gene65325:intron | 35.0% | |
| ATTTATGGTGAAGTCACCTA+GGG | + | chr5.2:15051315-15051334 | None:intergenic | 35.0% | |
| CAGCAGAATAGTTATCAAAC+AGG | + | chr5.2:15053148-15053167 | None:intergenic | 35.0% | |
| CATCAGATTAGCATCTATCA+TGG | - | chr5.2:15054418-15054437 | MS.gene65325:intron | 35.0% | |
| CATGATAGATGCTAATCTGA+TGG | + | chr5.2:15054420-15054439 | None:intergenic | 35.0% | |
| CATTCAGTTGGATTCATGAT+AGG | - | chr5.2:15053369-15053388 | MS.gene65325:CDS | 35.0% | |
| CTACACTTCATTTCAAGAGA+GGG | - | chr5.2:15052884-15052903 | MS.gene65325:intron | 35.0% | |
| CTATGCTTAATACTTTGGAC+GGG | - | chr5.2:15052337-15052356 | MS.gene65325:CDS | 35.0% | |
| CTGTTAAGCATAAGCAATCA+GGG | - | chr5.2:15053519-15053538 | MS.gene65325:CDS | 35.0% | |
| CTTGTAGCTTCATTGGAATA+AGG | - | chr5.2:15053787-15053806 | MS.gene65325:intron | 35.0% | |
| GGTATAAACGTATATTCCCT+AGG | - | chr5.2:15051296-15051315 | MS.gene65325:intron | 35.0% | |
| GTACTACTCTAAGCATAGTA+AGG | - | chr5.2:15053395-15053414 | MS.gene65325:CDS | 35.0% | |
| TAATTCTAAGCTGCTTCACA+AGG | - | chr5.2:15054671-15054690 | MS.gene65325:intron | 35.0% | |
| TATACGCTTTCTCTCTTTCT+TGG | - | chr5.2:15051469-15051488 | MS.gene65325:intron | 35.0% | |
| TATGCTTAATACTTTGGACG+GGG | - | chr5.2:15052338-15052357 | MS.gene65325:CDS | 35.0% | |
| TCTACACTTCATTTCAAGAG+AGG | - | chr5.2:15052883-15052902 | MS.gene65325:intron | 35.0% | |
| TCTGTTAAGCATAAGCAATC+AGG | - | chr5.2:15053518-15053537 | MS.gene65325:CDS | 35.0% | |
| TGTAGATAAAGCCAAGGTAA+GGG | + | chr5.2:15052869-15052888 | None:intergenic | 35.0% | |
| TGTGTTTCCATGCGATATAA+AGG | + | chr5.2:15052913-15052932 | None:intergenic | 35.0% | |
| TGTTAAGCATAAGCAATCAG+GGG | - | chr5.2:15053520-15053539 | MS.gene65325:CDS | 35.0% | |
| TTTAATGAGCTGTCCATTCT+TGG | + | chr5.2:15051557-15051576 | None:intergenic | 35.0% | |
| ! | AAACTTTGAGGGAAAATGTG+TGG | + | chr5.2:15054116-15054135 | None:intergenic | 35.0% |
| ! | AATTTGATGGATAGGATCCT+CGG | - | chr5.2:15052832-15052851 | MS.gene65325:intron | 35.0% |
| ! | AGGTTTAAGGTGAGTCAATA+AGG | + | chr5.2:15052151-15052170 | None:intergenic | 35.0% |
| ! | TATATTGACTGCGATAACGT+TGG | + | chr5.2:15052599-15052618 | None:intergenic | 35.0% |
| ! | TTTGTTGCTTGTAGCTTCAT+TGG | - | chr5.2:15053780-15053799 | MS.gene65325:intron | 35.0% |
| !! | AGATGACTACTTTGTTGTTC+TGG | - | chr5.2:15052272-15052291 | MS.gene65325:intron | 35.0% |
| !! | TCGGCATTTCTTTGATTTTG+AGG | + | chr5.2:15054296-15054315 | None:intergenic | 35.0% |
| !!! | ACTTTTAGCTTTCGGCAAAA+TGG | - | chr5.2:15053944-15053963 | MS.gene65325:intron | 35.0% |
| !!! | CTTTTAGCTTTCGGCAAAAT+GGG | - | chr5.2:15053945-15053964 | MS.gene65325:intron | 35.0% |
| !!! | TTTCTTTTGGGGTTTTGATG+TGG | + | chr5.2:15054347-15054366 | None:intergenic | 35.0% |
| AACACTTCTCCACAGGTTTA+AGG | + | chr5.2:15052164-15052183 | None:intergenic | 40.0% | |
| AACCTATGCATTTATGGTGC+TGG | - | chr5.2:15051775-15051794 | MS.gene65325:intron | 40.0% | |
| AAGGATTGAATCGGAGAAGT+CGG | + | chr5.2:15054178-15054197 | None:intergenic | 40.0% | |
| AATATCCTCACCTGCAAAGA+AGG | + | chr5.2:15051067-15051086 | None:intergenic | 40.0% | |
| AATCTTCCAGCAACTCTACT+TGG | - | chr5.2:15053427-15053446 | MS.gene65325:CDS | 40.0% | |
| ACTTGAACATGCACTTCTCT+GGG | + | chr5.2:15052063-15052082 | None:intergenic | 40.0% | |
| AGAAGGAGGATGTTTGTGTA+GGG | + | chr5.2:15050824-15050843 | None:intergenic | 40.0% | |
| AGGATGTTTGTGTAGGGAAA+GGG | + | chr5.2:15050818-15050837 | None:intergenic | 40.0% | |
| ATCTCTGCCAAGGATTGAAT+CGG | + | chr5.2:15054187-15054206 | None:intergenic | 40.0% | |
| CATCCAAACTTGCATTCAGT+TGG | - | chr5.2:15053357-15053376 | MS.gene65325:CDS | 40.0% | |
| CTATTGGAGATTGATCCTGA+TGG | - | chr5.2:15053041-15053060 | MS.gene65325:intron | 40.0% | |
| CTCTGTTCCAACAAACACTA+TGG | - | chr5.2:15054828-15054847 | MS.gene65325:CDS | 40.0% | |
| GAAACAATTGTTCTCTTGCG+TGG | - | chr5.2:15053495-15053514 | MS.gene65325:CDS | 40.0% | |
| GACTGCTTACACAAAGATAG+TGG | - | chr5.2:15053013-15053032 | MS.gene65325:intron | 40.0% | |
| GGATATTCAGGATGCTTGTT+TGG | - | chr5.2:15051080-15051099 | MS.gene65325:intron | 40.0% | |
| GTGACCGCAAAGAAGAATAA+AGG | + | chr5.2:15053726-15053745 | None:intergenic | 40.0% | |
| GTGTAGATAAAGCCAAGGTA+AGG | + | chr5.2:15052870-15052889 | None:intergenic | 40.0% | |
| GTTAAGCATAAGCAATCAGG+GGG | - | chr5.2:15053521-15053540 | MS.gene65325:CDS | 40.0% | |
| TACCAGCACCATAAATGCAT+AGG | + | chr5.2:15051780-15051799 | None:intergenic | 40.0% | |
| TACTTGAACATGCACTTCTC+TGG | + | chr5.2:15052064-15052083 | None:intergenic | 40.0% | |
| TATCAAACAGGTTGTCGTCT+CGG | + | chr5.2:15053136-15053155 | None:intergenic | 40.0% | |
| TCTTTGTGTAAGCAGTCTCA+TGG | + | chr5.2:15053010-15053029 | None:intergenic | 40.0% | |
| TGTTCCAACAAACACTATGG+TGG | - | chr5.2:15054831-15054850 | MS.gene65325:CDS | 40.0% | |
| TTATTCTTCTTTGCGGTCAC+CGG | - | chr5.2:15053726-15053745 | MS.gene65325:intron | 40.0% | |
| TTGTCTCATATCAACACGTC+CGG | + | chr5.2:15052472-15052491 | None:intergenic | 40.0% | |
| TTTCAAATCGTTGGACGGTT+GGG | - | chr5.2:15052116-15052135 | MS.gene65325:intron | 40.0% | |
| ! | AGCAACAACGCTTTCTTTTG+GGG | + | chr5.2:15054358-15054377 | None:intergenic | 40.0% |
| ! | AGTGTTTGTTGGAACAGAGA+GGG | + | chr5.2:15054827-15054846 | None:intergenic | 40.0% |
| ! | ATTCAGTACTTGATTGGCTC+TGG | - | chr5.2:15052504-15052523 | MS.gene65325:CDS | 40.0% |
| ! | ATTGACTCACCTTAAACCTG+TGG | - | chr5.2:15052152-15052171 | MS.gene65325:intron | 40.0% |
| ! | CAGCAACAACGCTTTCTTTT+GGG | + | chr5.2:15054359-15054378 | None:intergenic | 40.0% |
| ! | GGAGTTTGAGCCTTAATTTG+AGG | + | chr5.2:15054079-15054098 | None:intergenic | 40.0% |
| ! | TAGTGTTTGTTGGAACAGAG+AGG | + | chr5.2:15054828-15054847 | None:intergenic | 40.0% |
| ! | TCAGCAACAACGCTTTCTTT+TGG | + | chr5.2:15054360-15054379 | None:intergenic | 40.0% |
| ! | TGACATCTACATGGGAGTAT+TGG | - | chr5.2:15051726-15051745 | MS.gene65325:intron | 40.0% |
| ! | TGTTGTTCTGGTTGGAGATA+TGG | - | chr5.2:15052284-15052303 | MS.gene65325:intron | 40.0% |
| ! | TTAAACCTGTGGAGAAGTGT+TGG | - | chr5.2:15052163-15052182 | MS.gene65325:intron | 40.0% |
| ! | TTTTCAAATCGTTGGACGGT+TGG | - | chr5.2:15052115-15052134 | MS.gene65325:intron | 40.0% |
| ! | TTTTTCCTTCTTTGCAGGTG+AGG | - | chr5.2:15051059-15051078 | MS.gene65325:intron | 40.0% |
| !! | AATACTTGAGTTGGTGCGAA+TGG | - | chr5.2:15053749-15053768 | MS.gene65325:intron | 40.0% |
| !! | GACTACTTTGTTGTTCTGGT+TGG | - | chr5.2:15052276-15052295 | MS.gene65325:intron | 40.0% |
| !! | TTACTGACTTGGAACCAGAA+CGG | + | chr5.2:15050902-15050921 | None:intergenic | 40.0% |
| !! | TTGAGTTTCTAGTTGGGAAG+TGG | - | chr5.2:15053216-15053235 | MS.gene65325:CDS | 40.0% |
| !! | TTGCTTTTGCTGACATGATG+AGG | - | chr5.2:15053072-15053091 | MS.gene65325:intron | 40.0% |
| !!! | AAGGCAATTTTGATTGCGGT+TGG | - | chr5.2:15053690-15053709 | MS.gene65325:intron | 40.0% |
| !!! | ACTGTCGATTTTGATCAGAC+TGG | - | chr5.2:15051634-15051653 | MS.gene65325:intron | 40.0% |
| AAGAAATGCCGAGTACGATG+AGG | - | chr5.2:15054304-15054323 | MS.gene65325:intron | 45.0% | |
| AAGCTGCTTCACAAGGTATG+AGG | - | chr5.2:15054678-15054697 | MS.gene65325:intron | 45.0% | |
| AAGTGAAGGAACTGAGAGAG+AGG | - | chr5.2:15052235-15052254 | MS.gene65325:intron | 45.0% | |
| AATCCATCTGAGGAAGGATC+AGG | + | chr5.2:15052207-15052226 | None:intergenic | 45.0% | |
| ACCTGAAAGTCCGGTTATGT+CGG | + | chr5.2:15053249-15053268 | None:intergenic | 45.0% | |
| ACTGAGAATAGCCCTTACCT+TGG | - | chr5.2:15052855-15052874 | MS.gene65325:intron | 45.0% | |
| AGAATCGGTAAACATGGACC+CGG | + | chr5.2:15051700-15051719 | None:intergenic | 45.0% | |
| AGTGAAGGAACTGAGAGAGA+GGG | - | chr5.2:15052236-15052255 | MS.gene65325:intron | 45.0% | |
| ATTGAATCGGAGAAGTCGGA+AGG | + | chr5.2:15054174-15054193 | None:intergenic | 45.0% | |
| ATTGCTCCAAGTAGAGTTGC+TGG | + | chr5.2:15053436-15053455 | None:intergenic | 45.0% | |
| CAGATCTCCCAAATTCCTCA+TGG | - | chr5.2:15050866-15050885 | MS.gene65325:intron | 45.0% | |
| CAGTGACACATTGATGCATC+TGG | + | chr5.2:15052674-15052693 | None:intergenic | 45.0% | |
| CCTTCTAGTGAAAGTAGCCA+TGG | + | chr5.2:15054210-15054229 | None:intergenic | 45.0% | |
| CTTTGCAGGTGAGGATATTC+AGG | - | chr5.2:15051068-15051087 | MS.gene65325:intron | 45.0% | |
| GACTTCTCCGATTCAATCCT+TGG | - | chr5.2:15054177-15054196 | MS.gene65325:intron | 45.0% | |
| GAGAAGGAGGATGTTTGTGT+AGG | + | chr5.2:15050825-15050844 | None:intergenic | 45.0% | |
| GAGGATGTTTGTGTAGGGAA+AGG | + | chr5.2:15050819-15050838 | None:intergenic | 45.0% | |
| GGATGTTTGTGTAGGGAAAG+GGG | + | chr5.2:15050817-15050836 | None:intergenic | 45.0% | |
| GTGGAAGCCATGAGGAATTT+GGG | + | chr5.2:15050876-15050895 | None:intergenic | 45.0% | |
| TCGCACCAACTCAAGTATTC+CGG | + | chr5.2:15053748-15053767 | None:intergenic | 45.0% | |
| TCTTCGAATCCATCTGAGGA+AGG | + | chr5.2:15052213-15052232 | None:intergenic | 45.0% | |
| TGCCTTTAGCAAGTGACATG+TGG | + | chr5.2:15053880-15053899 | None:intergenic | 45.0% | |
| TGGATTCGAAGAGCAAGTGA+AGG | - | chr5.2:15052221-15052240 | MS.gene65325:intron | 45.0% | |
| TGTGTGGATAGCAGAGATAG+AGG | + | chr5.2:15054100-15054119 | None:intergenic | 45.0% | |
| TTGCTCTTCGAATCCATCTG+AGG | + | chr5.2:15052217-15052236 | None:intergenic | 45.0% | |
| TTTGCTCACTGCAGCAAATC+CGG | - | chr5.2:15051678-15051697 | MS.gene65325:intron | 45.0% | |
| TTTGCTGCAGTGAGCAAATC+CGG | + | chr5.2:15051676-15051695 | None:intergenic | 45.0% | |
| ! | AAGGACTTTTCACGCATGCA+CGG | + | chr5.2:15053668-15053687 | None:intergenic | 45.0% |
| ! | AAGGCACAGGAGTATGTTTG+TGG | - | chr5.2:15053278-15053297 | MS.gene65325:CDS | 45.0% |
| ! | AAGGGAAGGGATTACTGACT+TGG | + | chr5.2:15050913-15050932 | None:intergenic | 45.0% |
| ! | AGGCACAGGAGTATGTTTGT+GGG | - | chr5.2:15053279-15053298 | MS.gene65325:CDS | 45.0% |
| ! | ATAACCGGACTTTCAGGTGA+GGG | - | chr5.2:15053251-15053270 | MS.gene65325:CDS | 45.0% |
| ! | ATCTGAGACTGGCCATTTGA+GGG | + | chr5.2:15050851-15050870 | None:intergenic | 45.0% |
| ! | CCATGGCTACTTTCACTAGA+AGG | - | chr5.2:15054207-15054226 | MS.gene65325:intron | 45.0% |
| ! | GAATTTGGGAGATCTGAGAC+TGG | + | chr5.2:15050862-15050881 | None:intergenic | 45.0% |
| ! | GGAACGTGGTGATTTGAAGT+TGG | - | chr5.2:15052947-15052966 | MS.gene65325:intron | 45.0% |
| ! | TGCCACATGTCACTTGCTAA+AGG | - | chr5.2:15053875-15053894 | MS.gene65325:intron | 45.0% |
| ! | TTGAAGTTGGCTCAGATCTG+TGG | - | chr5.2:15052960-15052979 | MS.gene65325:intron | 45.0% |
| !! | GAAAGCGTTGTTGCTGATTG+CGG | - | chr5.2:15054363-15054382 | MS.gene65325:intron | 45.0% |
| !! | GTACTTGATTGGCTCTGGAA+TGG | - | chr5.2:15052509-15052528 | MS.gene65325:CDS | 45.0% |
| !! | GTTTCTAGTTGGGAAGTGGA+AGG | - | chr5.2:15053220-15053239 | MS.gene65325:CDS | 45.0% |
| !! | AAAAAAAAAAAAAAAAAAAG+TGG | + | chr5.2:15051182-15051201 | None:intergenic | 5.0% |
| ACCAAGAATCAGAAGGCTGG+AGG | - | chr5.2:15053307-15053326 | MS.gene65325:CDS | 50.0% | |
| AGCGAGTCTCGTGGTTATTG+TGG | - | chr5.2:15054388-15054407 | MS.gene65325:intron | 50.0% | |
| AGGGCGACCTTTATATCGCA+TGG | - | chr5.2:15052903-15052922 | MS.gene65325:intron | 50.0% | |
| AGTGTAGACTCCAATGCGCT+GGG | + | chr5.2:15053174-15053193 | None:intergenic | 50.0% | |
| ATGGGACCGCAGAGTAAACT+AGG | - | chr5.2:15053963-15053982 | MS.gene65325:intron | 50.0% | |
| CAATCCTTGGCAGAGATCCA+TGG | - | chr5.2:15054190-15054209 | MS.gene65325:intron | 50.0% | |
| CATACAGTCGCGTCCAAGAA+TGG | - | chr5.2:15051541-15051560 | MS.gene65325:intron | 50.0% | |
| CATTGGAGTCTACACTGCCA+AGG | - | chr5.2:15053178-15053197 | MS.gene65325:CDS | 50.0% | |
| CATTTGAGGGAGAGAGAAGG+AGG | + | chr5.2:15050838-15050857 | None:intergenic | 50.0% | |
| CCAGCACACCTGATGTATGA+TGG | - | chr5.2:15053110-15053129 | MS.gene65325:intron | 50.0% | |
| CCATCATACATCAGGTGTGC+TGG | + | chr5.2:15053113-15053132 | None:intergenic | 50.0% | |
| CCTTCGTTCCTCATCGTACT+CGG | + | chr5.2:15054315-15054334 | None:intergenic | 50.0% | |
| CTCCTTCTCTCTCCCTCAAA+TGG | - | chr5.2:15050836-15050855 | MS.gene65325:intron | 50.0% | |
| GAGAGCTTCAGCAAGAGCAA+AGG | - | chr5.2:15053331-15053350 | MS.gene65325:CDS | 50.0% | |
| GCTGCCACCATAGTGTTTGT+TGG | + | chr5.2:15054838-15054857 | None:intergenic | 50.0% | |
| GGAGAAGTCGGAAGGAATGA+AGG | + | chr5.2:15054166-15054185 | None:intergenic | 50.0% | |
| GGATCAGGCAGAAAATCCTG+TGG | + | chr5.2:15052192-15052211 | None:intergenic | 50.0% | |
| GGTCACCGGAATACTTGAGT+TGG | - | chr5.2:15053740-15053759 | MS.gene65325:intron | 50.0% | |
| GGTGGAAGCCATGAGGAATT+TGG | + | chr5.2:15050877-15050896 | None:intergenic | 50.0% | |
| GGTTGCCACCAAGAATCAGA+AGG | - | chr5.2:15053300-15053319 | MS.gene65325:CDS | 50.0% | |
| TAAGGGCTATTCTCAGTCCG+AGG | + | chr5.2:15052852-15052871 | None:intergenic | 50.0% | |
| TATCGCATGGAAACACAGCC+AGG | - | chr5.2:15052916-15052935 | MS.gene65325:intron | 50.0% | |
| TCCAAATAGCCCAGGGAGTA+GGG | + | chr5.2:15052386-15052405 | None:intergenic | 50.0% | |
| TCCAGCCTTCTGATTCTTGG+TGG | + | chr5.2:15053308-15053327 | None:intergenic | 50.0% | |
| TCCCTGGGCTATTTGGACAA+GGG | - | chr5.2:15052389-15052408 | MS.gene65325:CDS | 50.0% | |
| TCCTCCAGCCTTCTGATTCT+TGG | + | chr5.2:15053311-15053330 | None:intergenic | 50.0% | |
| TCTAGTTGGGAAGTGGAAGG+TGG | - | chr5.2:15053223-15053242 | MS.gene65325:CDS | 50.0% | |
| TGAACATGCACTTCTCTGGG+AGG | + | chr5.2:15052060-15052079 | None:intergenic | 50.0% | |
| TTGCTCACTGCAGCAAATCC+GGG | - | chr5.2:15051679-15051698 | MS.gene65325:intron | 50.0% | |
| ! | ACTTTCAGGTGAGGGACGAA+AGG | - | chr5.2:15053259-15053278 | MS.gene65325:CDS | 50.0% |
| ! | CATAACCGGACTTTCAGGTG+AGG | - | chr5.2:15053250-15053269 | MS.gene65325:CDS | 50.0% |
| ! | GATCTGAGACTGGCCATTTG+AGG | + | chr5.2:15050852-15050871 | None:intergenic | 50.0% |
| ! | TGACTTGGAACCAGAACGGA+GGG | + | chr5.2:15050898-15050917 | None:intergenic | 50.0% |
| !! | AAACACAGCCAGGCTTGCTA+AGG | - | chr5.2:15052926-15052945 | MS.gene65325:intron | 50.0% |
| !! | CTTTTGGGGAGGCATAGAGT+GGG | + | chr5.2:15052088-15052107 | None:intergenic | 50.0% |
| !! | TCTTTTGGGGAGGCATAGAG+TGG | + | chr5.2:15052089-15052108 | None:intergenic | 50.0% |
| AACACTATGGTGGCAGCCTC+CGG | - | chr5.2:15054841-15054860 | MS.gene65325:CDS | 55.0% | |
| ACCACGTTCCTTAGCAAGCC+TGG | + | chr5.2:15052937-15052956 | None:intergenic | 55.0% | |
| ATTGCGGAAAGCGAGTCTCG+TGG | - | chr5.2:15054379-15054398 | MS.gene65325:intron | 55.0% | |
| CAGGGGGCAGCTGTAGTAAT+AGG | - | chr5.2:15053537-15053556 | MS.gene65325:CDS | 55.0% | |
| CAGTGTAGACTCCAATGCGC+TGG | + | chr5.2:15053175-15053194 | None:intergenic | 55.0% | |
| CCGAGTACGATGAGGAACGA+AGG | - | chr5.2:15054312-15054331 | MS.gene65325:intron | 55.0% | |
| CGTCTCGGCCATCATACATC+AGG | + | chr5.2:15053121-15053140 | None:intergenic | 55.0% | |
| CTCCCGCCTAGTTTACTCTG+CGG | + | chr5.2:15053972-15053991 | None:intergenic | 55.0% | |
| CTCCCTGGGCTATTTGGACA+AGG | - | chr5.2:15052388-15052407 | MS.gene65325:CDS | 55.0% | |
| CTGCCTGATCCTTCCTCAGA+TGG | - | chr5.2:15052201-15052220 | MS.gene65325:intron | 55.0% | |
| GACCGCAGAGTAAACTAGGC+GGG | - | chr5.2:15053967-15053986 | MS.gene65325:intron | 55.0% | |
| GACGGGGTTCGTGATGAAAC+AGG | - | chr5.2:15052354-15052373 | MS.gene65325:CDS | 55.0% | |
| GCCACCAAGAATCAGAAGGC+TGG | - | chr5.2:15053304-15053323 | MS.gene65325:CDS | 55.0% | |
| GCCCTTGTCCAAATAGCCCA+GGG | + | chr5.2:15052393-15052412 | None:intergenic | 55.0% | |
| GCCGACATAACCGGACTTTC+AGG | - | chr5.2:15053245-15053264 | MS.gene65325:CDS | 55.0% | |
| GGACCGCAGAGTAAACTAGG+CGG | - | chr5.2:15053966-15053985 | MS.gene65325:intron | 55.0% | |
| GGCCATTTGAGGGAGAGAGA+AGG | + | chr5.2:15050841-15050860 | None:intergenic | 55.0% | |
| GGGCTATTTGGACAAGGGCA+TGG | - | chr5.2:15052394-15052413 | MS.gene65325:CDS | 55.0% | |
| GGTTGCCAACACTTCTCCAC+AGG | + | chr5.2:15052171-15052190 | None:intergenic | 55.0% | |
| GTAGCCATGGATCTCTGCCA+AGG | + | chr5.2:15054197-15054216 | None:intergenic | 55.0% | |
| GTCCAAATAGCCCAGGGAGT+AGG | + | chr5.2:15052387-15052406 | None:intergenic | 55.0% | |
| TCGTCCCTCACCTGAAAGTC+CGG | + | chr5.2:15053258-15053277 | None:intergenic | 55.0% | |
| TGCCCTTGTCCAAATAGCCC+AGG | + | chr5.2:15052394-15052413 | None:intergenic | 55.0% | |
| TGGAAGGTGGCCGACATAAC+CGG | - | chr5.2:15053236-15053255 | MS.gene65325:CDS | 55.0% | |
| !! | CTGACTTGGAACCAGAACGG+AGG | + | chr5.2:15050899-15050918 | None:intergenic | 55.0% |
| !! | GGAGAAGTGTTGGCAACCAC+AGG | - | chr5.2:15052173-15052192 | MS.gene65325:intron | 55.0% |
| !! | TGGCATCGACTTGTGACTGC+CGG | - | chr5.2:15051654-15051673 | MS.gene65325:intron | 55.0% |
| AACGGAGGGTGGAAGCCATG+AGG | + | chr5.2:15050884-15050903 | None:intergenic | 60.0% | |
| AATAGCCCAGGGAGTAGGGC+TGG | + | chr5.2:15052382-15052401 | None:intergenic | 60.0% | |
| ATCGTTGGACGGTTGGGCTG+AGG | - | chr5.2:15052122-15052141 | MS.gene65325:intron | 60.0% | |
| ATGGCTTCCACCCTCCGTTC+TGG | - | chr5.2:15050885-15050904 | MS.gene65325:intron | 60.0% | |
| CTTGGAACCAGAACGGAGGG+TGG | + | chr5.2:15050895-15050914 | None:intergenic | 60.0% | |
| GCCCTACTCCCTGGGCTATT+TGG | - | chr5.2:15052382-15052401 | MS.gene65325:CDS | 60.0% | |
| GGACCACCTTACCTCTGCGT+CGG | + | chr5.2:15054731-15054750 | None:intergenic | 60.0% | |
| TCTGCTGTTGCCCAGCGCAT+TGG | - | chr5.2:15053161-15053180 | MS.gene65325:CDS | 60.0% | |
| ! | AGGTGAGGGACGAAAGGCAC+AGG | - | chr5.2:15053265-15053284 | MS.gene65325:CDS | 60.0% |
| ! | GGGAAAGGGGTTGCTCTGAG+AGG | + | chr5.2:15050804-15050823 | None:intergenic | 60.0% |
| !! | GCCAGGCTTGCTAAGGAACG+TGG | - | chr5.2:15052933-15052952 | MS.gene65325:intron | 60.0% |
| AGAAGCCCTTGCCTCCACGC+CGG | + | chr5.2:15054863-15054882 | None:intergenic | 65.0% | |
| AGGTGCCAGCCCTACTCCCT+GGG | - | chr5.2:15052374-15052393 | MS.gene65325:CDS | 65.0% | |
| CAGGCTCCGACGCAGAGGTA+AGG | - | chr5.2:15054722-15054741 | MS.gene65325:intron | 65.0% | |
| GCGTGCACAGCTGTGGATGC+AGG | - | chr5.2:15054703-15054722 | MS.gene65325:intron | 65.0% | |
| GCTCCGACGCAGAGGTAAGG+TGG | - | chr5.2:15054725-15054744 | MS.gene65325:intron | 65.0% | |
| TGAGGCAGCGTGCACAGCTG+TGG | - | chr5.2:15054696-15054715 | MS.gene65325:intron | 65.0% | |
| AGCCTCCGGCGTGGAGGCAA+GGG | - | chr5.2:15054855-15054874 | MS.gene65325:CDS | 70.0% | |
| CAGGTGCCAGCCCTACTCCC+TGG | - | chr5.2:15052373-15052392 | MS.gene65325:CDS | 70.0% | |
| GGATGCAGGCTCCGACGCAG+AGG | - | chr5.2:15054717-15054736 | MS.gene65325:intron | 70.0% | |
| TATGGTGGCAGCCTCCGGCG+TGG | - | chr5.2:15054846-15054865 | MS.gene65325:CDS | 70.0% | |
| AGCCCTTGCCTCCACGCCGG+AGG | + | chr5.2:15054860-15054879 | None:intergenic | 75.0% | |
| CAGCCTCCGGCGTGGAGGCA+AGG | - | chr5.2:15054854-15054873 | MS.gene65325:CDS | 75.0% | |
| ! | GGTGGCAGCCTCCGGCGTGG+AGG | - | chr5.2:15054849-15054868 | MS.gene65325:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 15050795 | 15054884 | 15050795 | ID=MS.gene65325 |
| chr5.2 | mRNA | 15050795 | 15054884 | 15050795 | ID=MS.gene65325.t1;Parent=MS.gene65325 |
| chr5.2 | exon | 15054766 | 15054884 | 15054766 | ID=MS.gene65325.t1.exon1;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15054766 | 15054884 | 15054766 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| chr5.2 | exon | 15053149 | 15053653 | 15053149 | ID=MS.gene65325.t1.exon2;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15053149 | 15053653 | 15053149 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| chr5.2 | exon | 15052285 | 15052833 | 15052285 | ID=MS.gene65325.t1.exon3;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15052285 | 15052833 | 15052285 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| chr5.2 | exon | 15052128 | 15052152 | 15052128 | ID=MS.gene65325.t1.exon4;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15052128 | 15052152 | 15052128 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| chr5.2 | exon | 15050921 | 15051026 | 15050921 | ID=MS.gene65325.t1.exon5;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15050921 | 15051026 | 15050921 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| chr5.2 | exon | 15050795 | 15050822 | 15050795 | ID=MS.gene65325.t1.exon6;Parent=MS.gene65325.t1 |
| chr5.2 | CDS | 15050795 | 15050822 | 15050795 | ID=cds.MS.gene65325.t1;Parent=MS.gene65325.t1 |
| Gene Sequence |
| Protein sequence |
