Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65383.t1 | XP_003618123.2 | 98.9 | 268 | 3 | 0 | 2 | 269 | 46 | 313 | 2.20E-155 | 558.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65383.t1 | B5X582 | 53.8 | 277 | 116 | 4 | 3 | 269 | 115 | 389 | 4.4e-80 | 299.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65383.t1 | G7KFG5 | 98.9 | 268 | 3 | 0 | 2 | 269 | 41 | 308 | 1.6e-155 | 558.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049230 | MS.gene65383 | 0.801303 | 9.60E-49 | -1.69E-46 |
| MS.gene049378 | MS.gene65383 | 0.80307 | 4.15E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene65383 | 0.806444 | 8.20E-50 | -1.69E-46 |
| MS.gene050762 | MS.gene65383 | 0.803586 | 3.25E-49 | -1.69E-46 |
| MS.gene050763 | MS.gene65383 | 0.804501 | 2.10E-49 | -1.69E-46 |
| MS.gene054379 | MS.gene65383 | 0.814417 | 1.56E-51 | -1.69E-46 |
| MS.gene054930 | MS.gene65383 | 0.826522 | 2.59E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65383.t1 | MTR_5g099220 | 98.881 | 268 | 3 | 0 | 2 | 269 | 41 | 308 | 0.0 | 547 |
| MS.gene65383.t1 | MTR_5g099220 | 98.876 | 267 | 3 | 0 | 2 | 268 | 46 | 312 | 0.0 | 545 |
| MS.gene65383.t1 | MTR_5g099220 | 98.785 | 247 | 3 | 0 | 2 | 248 | 46 | 292 | 0.0 | 504 |
| MS.gene65383.t1 | MTR_2g031740 | 89.963 | 269 | 26 | 1 | 2 | 269 | 48 | 316 | 0.0 | 503 |
| MS.gene65383.t1 | MTR_5g099220 | 98.729 | 236 | 3 | 0 | 34 | 269 | 1 | 236 | 5.19e-173 | 478 |
| MS.gene65383.t1 | MTR_5g099220 | 98.723 | 235 | 3 | 0 | 34 | 268 | 1 | 235 | 4.54e-172 | 475 |
| MS.gene65383.t1 | MTR_2g031620 | 54.965 | 282 | 111 | 4 | 3 | 269 | 98 | 378 | 2.44e-99 | 305 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65383.t1 | AT1G30680 | 53.791 | 277 | 116 | 4 | 3 | 269 | 115 | 389 | 1.65e-92 | 288 |
| MS.gene65383.t1 | AT1G30660 | 53.597 | 278 | 118 | 4 | 1 | 269 | 32 | 307 | 5.93e-92 | 275 |
| MS.gene65383.t1 | AT1G30660 | 53.597 | 278 | 118 | 4 | 1 | 269 | 29 | 304 | 8.16e-92 | 275 |
| MS.gene65383.t1 | AT1G30660 | 53.597 | 278 | 118 | 4 | 1 | 269 | 39 | 314 | 8.71e-92 | 275 |
Find 65 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGCTTGTTGCTTACTTTA+AGG | 0.093113 | 5.2:+83923848 | MS.gene65383:intron |
| GTTATAGACAAGGTCCTTTA+TGG | 0.130566 | 5.2:+83925328 | MS.gene65383:CDS |
| GAACAATGGAGAAAAGATTT+TGG | 0.263962 | 5.2:+83924811 | MS.gene65383:CDS |
| AAGCTGAGTTCATCTTTCTT+TGG | 0.292938 | 5.2:-83926789 | None:intergenic |
| GTGTAAAGGTGGACAGTTAA+TGG | 0.331736 | 5.2:+83922551 | MS.gene65383:intron |
| AAGAGCTAGCACGGCGCCTT+GGG | 0.357506 | 5.2:+83926196 | MS.gene65383:CDS |
| GAAGAGCTAGCACGGCGCCT+TGG | 0.374758 | 5.2:+83926195 | MS.gene65383:CDS |
| CCTTACAGAATTTCTGCTTA+AGG | 0.380916 | 5.2:-83923892 | None:intergenic |
| AACCCTAAGCTCTCCTCATC+AGG | 0.396006 | 5.2:-83923163 | None:intergenic |
| TACATGTGGTTGGGCTGGTC+AGG | 0.399429 | 5.2:+83923016 | MS.gene65383:CDS |
| GTGGAACAGCAAAGCTTACT+TGG | 0.403923 | 5.2:+83926013 | MS.gene65383:CDS |
| AAACCTGATGAGGAGAGCTT+AGG | 0.440096 | 5.2:+83923160 | MS.gene65383:CDS |
| ACCTTTCCTGGTGCACCATC+AGG | 0.440161 | 5.2:-83925566 | None:intergenic |
| TTAGACAACTCTTGTTTGCC+TGG | 0.447652 | 5.2:+83922409 | MS.gene65383:CDS |
| TTAGGTGGTTCGCATTATCC+TGG | 0.449392 | 5.2:+83926137 | MS.gene65383:intron |
| TTGACCTGGTGGATCATTAT+CGG | 0.454060 | 5.2:-83926163 | None:intergenic |
| AAACAAAATGGGTTGATTGT+TGG | 0.461337 | 5.2:+83924777 | MS.gene65383:CDS |
| GTTGTAGTGAATTTGCAATC+TGG | 0.465654 | 5.2:+83922979 | MS.gene65383:intron |
| AACCTGATGAGGAGAGCTTA+GGG | 0.465798 | 5.2:+83923161 | MS.gene65383:CDS |
| TAATGTCGTCAAGTCCATAA+AGG | 0.465841 | 5.2:-83925342 | None:intergenic |
| TTCTGCAGATGACAAGGAAC+TGG | 0.466614 | 5.2:+83923132 | MS.gene65383:CDS |
| AAGCTTTCACTTGAAGAGGC+TGG | 0.467773 | 5.2:+83925521 | MS.gene65383:CDS |
| TGATAAGCTTTCACTTGAAG+AGG | 0.469616 | 5.2:+83925517 | MS.gene65383:CDS |
| CACGGCGCCTTGGGCGAGAA+AGG | 0.471934 | 5.2:+83926205 | MS.gene65383:CDS |
| GATAATGATAATAGGTTGAG+GGG | 0.483543 | 5.2:+83925489 | MS.gene65383:intron |
| AGACCTACATGTGGTTGGGC+TGG | 0.487821 | 5.2:+83923011 | MS.gene65383:CDS |
| CAGCAAAGCTTACTTGGATA+AGG | 0.491598 | 5.2:+83926019 | MS.gene65383:CDS |
| GTTGGAACCACTTGGTCCTA+AGG | 0.491634 | 5.2:+83923183 | MS.gene65383:CDS |
| AGTAAGCTTTGCTGTTCCAC+AGG | 0.494786 | 5.2:-83926010 | None:intergenic |
| TGGATACCTTTGGACAAAAG+AGG | 0.502264 | 5.2:-83922444 | None:intergenic |
| AGATCTGCCACCAATAGAAA+AGG | 0.504280 | 5.2:+83925598 | MS.gene65383:CDS |
| CCTTTGGACAAAAGAGGTTG+TGG | 0.510616 | 5.2:-83922438 | None:intergenic |
| TGATAATGATAATAGGTTGA+GGG | 0.514143 | 5.2:+83925488 | MS.gene65383:intron |
| AGCTTAGGGTTGGAACCACT+TGG | 0.515652 | 5.2:+83923175 | MS.gene65383:CDS |
| AAGGCAACTCTCGGACGAAA+AGG | 0.520966 | 5.2:+83923911 | MS.gene65383:CDS |
| GTGGATCATTATCGGTAGCC+AGG | 0.524131 | 5.2:-83926155 | None:intergenic |
| AGTGTTCCTGATGGTGCACC+AGG | 0.529108 | 5.2:+83925560 | MS.gene65383:CDS |
| CCTTAAGCAGAAATTCTGTA+AGG | 0.535293 | 5.2:+83923892 | MS.gene65383:CDS |
| TCCTGATGGTGCACCAGGAA+AGG | 0.537409 | 5.2:+83925565 | MS.gene65383:CDS |
| CTTCTTCAAAGATGCAAATG+AGG | 0.541918 | 5.2:+83926809 | MS.gene65383:CDS |
| AAGCACAAAGTGGAACCTCT+TGG | 0.547568 | 5.2:+83922379 | MS.gene65383:intron |
| TAAAATATTGAAGCACAAAG+TGG | 0.551755 | 5.2:+83922369 | MS.gene65383:intron |
| TTGATATGCCAGTGTAAAGG+TGG | 0.562981 | 5.2:+83922540 | MS.gene65383:intron |
| CTTTAGCTGAAGAGCTAGCA+CGG | 0.564457 | 5.2:+83926187 | MS.gene65383:CDS |
| TAGACAACTCTTGTTTGCCT+GGG | 0.566831 | 5.2:+83922410 | MS.gene65383:CDS |
| AAGAGGTTGTGGTAGTTCCC+AGG | 0.571323 | 5.2:-83922427 | None:intergenic |
| TGATGAGGAGAGCTTAGGGT+TGG | 0.580112 | 5.2:+83923165 | MS.gene65383:CDS |
| TGAATGACCTTTCTCGCCCA+AGG | 0.584678 | 5.2:-83926212 | None:intergenic |
| TCAGGTGTTGGCAAGTACGC+TGG | 0.585250 | 5.2:+83926766 | MS.gene65383:intron |
| TCAGCTAAAGCTTGACCTGG+TGG | 0.586602 | 5.2:-83926174 | None:intergenic |
| ATAGGTTTCTGCAGATGACA+AGG | 0.602576 | 5.2:+83923126 | MS.gene65383:intron |
| TCTTCAGCTAAAGCTTGACC+TGG | 0.612094 | 5.2:-83926177 | None:intergenic |
| AAATTCTGTAAGGCAACTCT+CGG | 0.613403 | 5.2:+83923902 | MS.gene65383:CDS |
| AAGGTGGACAGTTAATGGAG+AGG | 0.614763 | 5.2:+83922556 | MS.gene65383:CDS |
| TTGAATACCTTAGGACCAAG+TGG | 0.632809 | 5.2:-83923190 | None:intergenic |
| TGACCAGCCCAACCACATGT+AGG | 0.639589 | 5.2:-83923014 | None:intergenic |
| TGGTTGCAAGTACAGAACAA+TGG | 0.639955 | 5.2:+83924797 | MS.gene65383:CDS |
| ATAATGATAATAGGTTGAGG+GGG | 0.644644 | 5.2:+83925490 | MS.gene65383:intron |
| AATTGTGTTAGTGTTCCTGA+TGG | 0.656404 | 5.2:+83925551 | MS.gene65383:CDS |
| ACTGGACAATAAACCTGATG+AGG | 0.661447 | 5.2:+83923150 | MS.gene65383:CDS |
| TTGTCTAAGCTGATACCAAG+AGG | 0.662148 | 5.2:-83922394 | None:intergenic |
| ATACTGCATATCAATACCTG+TGG | 0.667697 | 5.2:+83925994 | MS.gene65383:CDS |
| GCTACCGATAATGATCCACC+AGG | 0.671318 | 5.2:+83926159 | MS.gene65383:CDS |
| GTAGTGAATTTGCAATCTGG+AGG | 0.685376 | 5.2:+83922982 | MS.gene65383:intron |
| ACAGGGAAAAGTTATAGACA+AGG | 0.702128 | 5.2:+83925318 | MS.gene65383:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAAAAAAAAAATAGTATAA+TGG | - | chr5.2:83923593-83923612 | None:intergenic | 10.0% |
| !!! | TTCTAAAAAAAATAGATTTT+GGG | - | chr5.2:83924369-83924388 | None:intergenic | 10.0% |
| !!! | TTTCTAAAAAAAATAGATTT+TGG | - | chr5.2:83924370-83924389 | None:intergenic | 10.0% |
| !! | AAAAATGTAAAACAAGATAT+CGG | - | chr5.2:83923962-83923981 | None:intergenic | 15.0% |
| !! | AAATATATAATTGAAAGAGA+AGG | - | chr5.2:83926067-83926086 | None:intergenic | 15.0% |
| !! | ACATTTATATTCATTTAAGA+TGG | - | chr5.2:83923719-83923738 | None:intergenic | 15.0% |
| !! | ATTTATAAAAAACACTAGTA+AGG | - | chr5.2:83924490-83924509 | None:intergenic | 15.0% |
| !! | CTTAAATGAATATAAATGTA+TGG | + | chr5.2:83923720-83923739 | MS.gene65383:intron | 15.0% |
| !! | GAAAATTATCAAAATAATAG+AGG | + | chr5.2:83923502-83923521 | MS.gene65383:intron | 15.0% |
| !! | TAAAATAATTTGAATACCTT+AGG | - | chr5.2:83923202-83923221 | None:intergenic | 15.0% |
| !! | TTGAATCAATTATGTTAATT+AGG | - | chr5.2:83925009-83925028 | None:intergenic | 15.0% |
| !!! | ATCTTGTTTTACATTTTTTT+TGG | + | chr5.2:83923964-83923983 | MS.gene65383:intron | 15.0% |
| !!! | ATTCAAATGCTAAATTTTTT+TGG | + | chr5.2:83925292-83925311 | MS.gene65383:intron | 15.0% |
| !!! | TAATTTTCATTAACAATTTG+AGG | - | chr5.2:83923490-83923509 | None:intergenic | 15.0% |
| !!! | TATAGTTTGATAATGATAAT+AGG | + | chr5.2:83925481-83925500 | MS.gene65383:intron | 15.0% |
| !!! | TATATTTTTCCAAAATCATT+AGG | + | chr5.2:83924333-83924352 | MS.gene65383:intron | 15.0% |
| !!! | TTTCTTTATTTTTTAATGTC+AGG | + | chr5.2:83926748-83926767 | MS.gene65383:intron | 15.0% |
| !! | AAATGAAGATAACTTCAAAA+AGG | + | chr5.2:83925442-83925461 | MS.gene65383:intron | 20.0% |
| !! | AATGAAGATAACTTCAAAAA+GGG | + | chr5.2:83925443-83925462 | MS.gene65383:intron | 20.0% |
| !! | ACACATATAAATAGAGTAAA+TGG | - | chr5.2:83922943-83922962 | None:intergenic | 20.0% |
| !! | AGATAAAATGCAACTAATAA+AGG | - | chr5.2:83923411-83923430 | None:intergenic | 20.0% |
| !! | GACAACATTATAAAAAAGTA+AGG | - | chr5.2:83924577-83924596 | None:intergenic | 20.0% |
| !! | TAAATCCTAACGTATAAAAA+TGG | - | chr5.2:83924553-83924572 | None:intergenic | 20.0% |
| !! | TAGCATTTGAATTAAAATCA+GGG | - | chr5.2:83925284-83925303 | None:intergenic | 20.0% |
| !! | TCTATAAAATTACTTATCCA+GGG | + | chr5.2:83922842-83922861 | MS.gene65383:intron | 20.0% |
| !! | TGAAAGAAATAAAGGAAAAT+GGG | - | chr5.2:83924160-83924179 | None:intergenic | 20.0% |
| !! | TTAGCATTTGAATTAAAATC+AGG | - | chr5.2:83925285-83925304 | None:intergenic | 20.0% |
| !! | TTCATTTATTTAGTTGGATA+TGG | - | chr5.2:83926668-83926687 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGAAGTAAACAT+AGG | + | chr5.2:83923422-83923441 | MS.gene65383:intron | 20.0% |
| !!! | CTTTTACCTATAAACAAAAT+GGG | + | chr5.2:83924766-83924785 | MS.gene65383:CDS | 20.0% |
| !!! | GAACATTTTAAAAGTATATG+AGG | - | chr5.2:83924243-83924262 | None:intergenic | 20.0% |
| !!! | TATATATTTCTAGATCAGAA+GGG | + | chr5.2:83926078-83926097 | MS.gene65383:intron | 20.0% |
| !!! | TATTTTTCATGTTCATAGTA+AGG | + | chr5.2:83926245-83926264 | MS.gene65383:intron | 20.0% |
| !!! | TCACTTGAAATTTTGAAATA+AGG | + | chr5.2:83923527-83923546 | MS.gene65383:intron | 20.0% |
| !!! | TGATTACTATTGATTATTCT+CGG | + | chr5.2:83923335-83923354 | MS.gene65383:intron | 20.0% |
| !!! | TTATATATTTCTAGATCAGA+AGG | + | chr5.2:83926077-83926096 | MS.gene65383:intron | 20.0% |
| !!! | TTATTCCAAAAGTCTTATTT+AGG | + | chr5.2:83923296-83923315 | MS.gene65383:intron | 20.0% |
| !!! | TTATTTTATTCAGTTTCAGA+AGG | + | chr5.2:83923214-83923233 | MS.gene65383:intron | 20.0% |
| !!! | TTGAAACATGTATTTTAGAT+GGG | - | chr5.2:83925915-83925934 | None:intergenic | 20.0% |
| !!! | TTTTATCTGAAGTAAACATA+GGG | + | chr5.2:83923423-83923442 | MS.gene65383:intron | 20.0% |
| ! | AACCATCCAATTTAAATCAA+TGG | - | chr5.2:83926516-83926535 | None:intergenic | 25.0% |
| ! | AAGTTAAGAACTAACTAGTT+AGG | - | chr5.2:83924710-83924729 | None:intergenic | 25.0% |
| ! | ATAAAAAACACTAGTAAGGA+GGG | - | chr5.2:83924486-83924505 | None:intergenic | 25.0% |
| ! | ATGGAAATATTTGCTCTATA+TGG | - | chr5.2:83926649-83926668 | None:intergenic | 25.0% |
| ! | ATTTCCAACAAAAGAAGATA+TGG | - | chr5.2:83925418-83925437 | None:intergenic | 25.0% |
| ! | CATATGAAAATGTATATGCT+TGG | - | chr5.2:83925209-83925228 | None:intergenic | 25.0% |
| ! | CATCACACTAAATATTTACT+AGG | - | chr5.2:83925830-83925849 | None:intergenic | 25.0% |
| ! | GAACATGAAAAATAAATGAC+AGG | - | chr5.2:83926239-83926258 | None:intergenic | 25.0% |
| ! | GACAATTTATGACAAAAAGA+AGG | - | chr5.2:83923275-83923294 | None:intergenic | 25.0% |
| ! | GATTGAAGAGATAAAACAAT+TGG | - | chr5.2:83925938-83925957 | None:intergenic | 25.0% |
| ! | GTATAATTTCATAACCAGTT+AGG | + | chr5.2:83924934-83924953 | MS.gene65383:intron | 25.0% |
| ! | GTCTATAAAATTACTTATCC+AGG | + | chr5.2:83922841-83922860 | MS.gene65383:intron | 25.0% |
| ! | GTGAAAGAAATAAAGGAAAA+TGG | - | chr5.2:83924161-83924180 | None:intergenic | 25.0% |
| ! | TAAAATATTGAAGCACAAAG+TGG | + | chr5.2:83922369-83922388 | MS.gene65383:intron | 25.0% |
| ! | TATAAAAAACACTAGTAAGG+AGG | - | chr5.2:83924487-83924506 | None:intergenic | 25.0% |
| ! | TCAAACATAGAACTTCATTA+AGG | + | chr5.2:83923073-83923092 | MS.gene65383:intron | 25.0% |
| ! | TGTGTCTTCATTTATTTAGT+TGG | - | chr5.2:83926674-83926693 | None:intergenic | 25.0% |
| !! | AAAGACCTAAATAAGACTTT+TGG | - | chr5.2:83923304-83923323 | None:intergenic | 25.0% |
| !! | AAAGCTAATCCTAATGATTT+TGG | - | chr5.2:83924345-83924364 | None:intergenic | 25.0% |
| !! | AAGACACAATATGGATTTTA+GGG | + | chr5.2:83924264-83924283 | MS.gene65383:intron | 25.0% |
| !! | ATAACACAAACCTTTTCTAT+TGG | - | chr5.2:83925611-83925630 | None:intergenic | 25.0% |
| !! | ATGCAATTGTCACTTAAAAA+TGG | - | chr5.2:83924305-83924324 | None:intergenic | 25.0% |
| !! | GCTTTTACCTATAAACAAAA+TGG | + | chr5.2:83924765-83924784 | MS.gene65383:CDS | 25.0% |
| !! | TAAATGGTCATTACTCATTT+TGG | - | chr5.2:83922927-83922946 | None:intergenic | 25.0% |
| !! | TAAGACACAATATGGATTTT+AGG | + | chr5.2:83924263-83924282 | MS.gene65383:intron | 25.0% |
| !! | TGATAATGATAATAGGTTGA+GGG | + | chr5.2:83925488-83925507 | MS.gene65383:intron | 25.0% |
| !! | TTACATTTTACTTGATTACG+TGG | + | chr5.2:83923101-83923120 | MS.gene65383:intron | 25.0% |
| !! | TTGTAAATATTTTATGTGCG+TGG | + | chr5.2:83924669-83924688 | MS.gene65383:intron | 25.0% |
| !!! | AAATGTTCTAAGACACAATA+TGG | + | chr5.2:83924255-83924274 | MS.gene65383:intron | 25.0% |
| !!! | AACCATTGATTTAAATTGGA+TGG | + | chr5.2:83926511-83926530 | MS.gene65383:intron | 25.0% |
| !!! | AATCAACCCATTTTGTTTAT+AGG | - | chr5.2:83924775-83924794 | None:intergenic | 25.0% |
| !!! | ACTCATTTTGGTTCTTAAAT+GGG | - | chr5.2:83922915-83922934 | None:intergenic | 25.0% |
| !!! | AGTTTGATTTGATACATTCA+AGG | + | chr5.2:83922876-83922895 | MS.gene65383:intron | 25.0% |
| !!! | ATTTTTTTGGAGGATTAATG+TGG | + | chr5.2:83925143-83925162 | MS.gene65383:intron | 25.0% |
| !!! | CTAAATTTTTTTGGTGTACA+GGG | + | chr5.2:83925301-83925320 | MS.gene65383:intron | 25.0% |
| !!! | GAAATTTTGAAATAAGGTTC+AGG | + | chr5.2:83923533-83923552 | MS.gene65383:intron | 25.0% |
| !!! | GTTGAAACATGTATTTTAGA+TGG | - | chr5.2:83925916-83925935 | None:intergenic | 25.0% |
| !!! | TACTCATTTTGGTTCTTAAA+TGG | - | chr5.2:83922916-83922935 | None:intergenic | 25.0% |
| !!! | TATTTTTTAATGTCAGGTGT+TGG | + | chr5.2:83926754-83926773 | MS.gene65383:intron | 25.0% |
| !!! | TCTCAACCATTGATTTAAAT+TGG | + | chr5.2:83926507-83926526 | MS.gene65383:intron | 25.0% |
| !!! | TTGATAATGATAATAGGTTG+AGG | + | chr5.2:83925487-83925506 | MS.gene65383:intron | 25.0% |
| !!! | TTTGACCATTTTTATACGTT+AGG | + | chr5.2:83924545-83924564 | MS.gene65383:intron | 25.0% |
| AACAAGCTAAAATAGGGAAA+AGG | - | chr5.2:83923838-83923857 | None:intergenic | 30.0% | |
| AACAGAAGACACAATATTTG+AGG | - | chr5.2:83922779-83922798 | None:intergenic | 30.0% | |
| AAGAAATAAAGGAAAATGGG+AGG | - | chr5.2:83924157-83924176 | None:intergenic | 30.0% | |
| AATAGAAATCTCTCCTCATT+TGG | - | chr5.2:83924104-83924123 | None:intergenic | 30.0% | |
| AATGTAAAACAAGATATCGG+AGG | - | chr5.2:83923959-83923978 | None:intergenic | 30.0% | |
| ACCAAATACATTGAAAAGAC+TGG | - | chr5.2:83922513-83922532 | None:intergenic | 30.0% | |
| AGAAATAAAGGAAAATGGGA+GGG | - | chr5.2:83924156-83924175 | None:intergenic | 30.0% | |
| AGTAAGCAACAAGCTAAAAT+AGG | - | chr5.2:83923845-83923864 | None:intergenic | 30.0% | |
| ATAAGTATGGTATGTTCAAG+TGG | + | chr5.2:83923672-83923691 | MS.gene65383:intron | 30.0% | |
| ATAGAAATCTCTCCTCATTT+GGG | - | chr5.2:83924103-83924122 | None:intergenic | 30.0% | |
| ATTCCAATAGTAAGAGATAG+AGG | - | chr5.2:83924446-83924465 | None:intergenic | 30.0% | |
| CAACAAAAGAAGATATGGAT+GGG | - | chr5.2:83925413-83925432 | None:intergenic | 30.0% | |
| CTAGTCAGATTATTTGCTTA+TGG | + | chr5.2:83923808-83923827 | MS.gene65383:intron | 30.0% | |
| GAAGGGACAACTTATTAATT+TGG | + | chr5.2:83926095-83926114 | MS.gene65383:intron | 30.0% | |
| GGGGAACTTAAAAATTGTAT+TGG | - | chr5.2:83924082-83924101 | None:intergenic | 30.0% | |
| GTAAGCAACAAGCTAAAATA+GGG | - | chr5.2:83923844-83923863 | None:intergenic | 30.0% | |
| TAAGTATGGTATGTTCAAGT+GGG | + | chr5.2:83923673-83923692 | MS.gene65383:intron | 30.0% | |
| TACACTTACAGGATATGATT+AGG | - | chr5.2:83924603-83924622 | None:intergenic | 30.0% | |
| TACTGATGTTTGCATCATTA+AGG | - | chr5.2:83925853-83925872 | None:intergenic | 30.0% | |
| TATTTACTAGGCCTTAAAAG+TGG | - | chr5.2:83925818-83925837 | None:intergenic | 30.0% | |
| TCAGCAAGTGAAAGAAATAA+AGG | - | chr5.2:83924168-83924187 | None:intergenic | 30.0% | |
| TCATTAATGCCACACAATAA+AGG | - | chr5.2:83924969-83924988 | None:intergenic | 30.0% | |
| TTACTTGATTACGTGGTTAT+AGG | + | chr5.2:83923108-83923127 | MS.gene65383:intron | 30.0% | |
| TTGCATTCTCTTGAAATATC+TGG | + | chr5.2:83926623-83926642 | MS.gene65383:intron | 30.0% | |
| ! | ATAATGATAATAGGTTGAGG+GGG | + | chr5.2:83925490-83925509 | MS.gene65383:intron | 30.0% |
| ! | CTTTTCACATTATCACTGAT+GGG | + | chr5.2:83922586-83922605 | MS.gene65383:CDS | 30.0% |
| ! | GAACAATGGAGAAAAGATTT+TGG | + | chr5.2:83924811-83924830 | MS.gene65383:CDS | 30.0% |
| ! | GATAATGATAATAGGTTGAG+GGG | + | chr5.2:83925489-83925508 | MS.gene65383:intron | 30.0% |
| ! | TCTTTTCACATTATCACTGA+TGG | + | chr5.2:83922585-83922604 | MS.gene65383:CDS | 30.0% |
| ! | TTTTTGATATGCCAGTGTAA+AGG | + | chr5.2:83922537-83922556 | MS.gene65383:intron | 30.0% |
| !! | AAACAAAATGGGTTGATTGT+TGG | + | chr5.2:83924777-83924796 | MS.gene65383:CDS | 30.0% |
| !! | CAAATTTTAACATGCAAGCA+TGG | - | chr5.2:83924859-83924878 | None:intergenic | 30.0% |
| !! | CTTCATAGATTCCACTTTTA+AGG | + | chr5.2:83925804-83925823 | MS.gene65383:intron | 30.0% |
| !! | TTAGCTTGTTGCTTACTTTA+AGG | + | chr5.2:83923848-83923867 | MS.gene65383:intron | 30.0% |
| !! | TTTTGACTAATAGTTCTCCT+TGG | + | chr5.2:83924416-83924435 | MS.gene65383:intron | 30.0% |
| !!! | ACGGAAAAGAATTTTTTTGG+AGG | + | chr5.2:83925133-83925152 | MS.gene65383:intron | 30.0% |
| !!! | ACTTGTTTGTTTTGAGGTTT+TGG | + | chr5.2:83922621-83922640 | MS.gene65383:intron | 30.0% |
| !!! | GAGACGGAAAAGAATTTTTT+TGG | + | chr5.2:83925130-83925149 | MS.gene65383:intron | 30.0% |
| !!! | GCTAAATTTTTTTGGTGTAC+AGG | + | chr5.2:83925300-83925319 | MS.gene65383:intron | 30.0% |
| !!! | TCTTCAACTTGTTTGTTTTG+AGG | + | chr5.2:83922615-83922634 | MS.gene65383:intron | 30.0% |
| !!! | TTTTGAGGTTTTGGTGATAT+TGG | + | chr5.2:83922630-83922649 | MS.gene65383:intron | 30.0% |
| AAATGGTCAAATCTCGTCTT+AGG | - | chr5.2:83924536-83924555 | None:intergenic | 35.0% | |
| AAATTCTGTAAGGCAACTCT+CGG | + | chr5.2:83923902-83923921 | MS.gene65383:CDS | 35.0% | |
| AAGCTGAGTTCATCTTTCTT+TGG | - | chr5.2:83926792-83926811 | None:intergenic | 35.0% | |
| AATACATTGCAGTAGTAGTG+TGG | + | chr5.2:83923639-83923658 | MS.gene65383:intron | 35.0% | |
| AATTGTGTTAGTGTTCCTGA+TGG | + | chr5.2:83925551-83925570 | MS.gene65383:CDS | 35.0% | |
| AATTTCATAACCAGTTAGGC+AGG | + | chr5.2:83924938-83924957 | MS.gene65383:intron | 35.0% | |
| ACAAGCAAAAGATACACTTG+GGG | - | chr5.2:83922747-83922766 | None:intergenic | 35.0% | |
| ACAGGGAAAAGTTATAGACA+AGG | + | chr5.2:83925318-83925337 | MS.gene65383:intron | 35.0% | |
| ATACTGCATATCAATACCTG+TGG | + | chr5.2:83925994-83926013 | MS.gene65383:CDS | 35.0% | |
| ATAGCATTGCATACACTTAC+AGG | - | chr5.2:83924614-83924633 | None:intergenic | 35.0% | |
| ATATTTGGAGGACCAATTAG+AGG | + | chr5.2:83925176-83925195 | MS.gene65383:intron | 35.0% | |
| ATGCTTGTCTTTATGAAGTC+AGG | + | chr5.2:83925971-83925990 | MS.gene65383:intron | 35.0% | |
| ATGGATGGGAAAATAGGTTT+AGG | - | chr5.2:83925399-83925418 | None:intergenic | 35.0% | |
| CAAACTTTCAAAAACATCCC+TGG | - | chr5.2:83922862-83922881 | None:intergenic | 35.0% | |
| CCAACAAAAGAAGATATGGA+TGG | - | chr5.2:83925414-83925433 | None:intergenic | 35.0% | |
| CCTTAAGCAGAAATTCTGTA+AGG | + | chr5.2:83923892-83923911 | MS.gene65383:CDS | 35.0% | |
| CCTTACAGAATTTCTGCTTA+AGG | - | chr5.2:83923895-83923914 | None:intergenic | 35.0% | |
| CTTCCTCTATCTCTTACTAT+TGG | + | chr5.2:83924440-83924459 | MS.gene65383:intron | 35.0% | |
| CTTCTTCAAAGATGCAAATG+AGG | + | chr5.2:83926809-83926828 | MS.gene65383:CDS | 35.0% | |
| GAAATAAAGGAAAATGGGAG+GGG | - | chr5.2:83924155-83924174 | None:intergenic | 35.0% | |
| GAAGATATGGATGGGAAAAT+AGG | - | chr5.2:83925405-83925424 | None:intergenic | 35.0% | |
| GAAGTTCTATGTTTGAGAAC+AGG | - | chr5.2:83923069-83923088 | None:intergenic | 35.0% | |
| GACAAGCAAAAGATACACTT+GGG | - | chr5.2:83922748-83922767 | None:intergenic | 35.0% | |
| GACATATTCAAGGATCGAAA+TGG | - | chr5.2:83922677-83922696 | None:intergenic | 35.0% | |
| GGCAATGTATTAACTCAACA+TGG | - | chr5.2:83923777-83923796 | None:intergenic | 35.0% | |
| GTGTCTTCTGTTAGTTAGTT+TGG | + | chr5.2:83922787-83922806 | MS.gene65383:intron | 35.0% | |
| GTTATAGACAAGGTCCTTTA+TGG | + | chr5.2:83925328-83925347 | MS.gene65383:CDS | 35.0% | |
| GTTGTAGTGAATTTGCAATC+TGG | + | chr5.2:83922979-83922998 | MS.gene65383:intron | 35.0% | |
| TAATGTCGTCAAGTCCATAA+AGG | - | chr5.2:83925345-83925364 | None:intergenic | 35.0% | |
| TAATTGGTCCTCCAAATATC+AGG | - | chr5.2:83925175-83925194 | None:intergenic | 35.0% | |
| TAGAAATCTCTCCTCATTTG+GGG | - | chr5.2:83924102-83924121 | None:intergenic | 35.0% | |
| TATTTGGAGGACCAATTAGA+GGG | + | chr5.2:83925177-83925196 | MS.gene65383:intron | 35.0% | |
| TGACAAGCAAAAGATACACT+TGG | - | chr5.2:83922749-83922768 | None:intergenic | 35.0% | |
| TGATAAGCTTTCACTTGAAG+AGG | + | chr5.2:83925517-83925536 | MS.gene65383:CDS | 35.0% | |
| TGATGACTATACGTTAGAGA+CGG | + | chr5.2:83925114-83925133 | MS.gene65383:intron | 35.0% | |
| TGGATGGGAAAATAGGTTTA+GGG | - | chr5.2:83925398-83925417 | None:intergenic | 35.0% | |
| TTATAGACCATGCTGACAAT+TGG | - | chr5.2:83922829-83922848 | None:intergenic | 35.0% | |
| TTGAGGTGCAATTAATCGTT+GGG | - | chr5.2:83926367-83926386 | None:intergenic | 35.0% | |
| ! | ACACAAACCTTTTCTATTGG+TGG | - | chr5.2:83925608-83925627 | None:intergenic | 35.0% |
| ! | CCATCCATATCTTCTTTTGT+TGG | + | chr5.2:83925411-83925430 | MS.gene65383:intron | 35.0% |
| ! | GATACACTTGGGGATATTTT+TGG | - | chr5.2:83922737-83922756 | None:intergenic | 35.0% |
| ! | GCCAGTCTTTTCAATGTATT+TGG | + | chr5.2:83922509-83922528 | MS.gene65383:intron | 35.0% |
| ! | GCTACCTCATTCTGAAAAAT+TGG | - | chr5.2:83923251-83923270 | None:intergenic | 35.0% |
| ! | TTCCTTTCTCCCATTCTTTT+AGG | + | chr5.2:83926119-83926138 | MS.gene65383:intron | 35.0% |
| ! | TTTTAGACCTACATGTGGTT+GGG | + | chr5.2:83923007-83923026 | MS.gene65383:CDS | 35.0% |
| !! | AATGGAGAAAAGATTTTGGC+AGG | + | chr5.2:83924815-83924834 | MS.gene65383:CDS | 35.0% |
| !! | ACACTTAAGCTTTGTTTGCA+AGG | - | chr5.2:83924217-83924236 | None:intergenic | 35.0% |
| !! | ACTGCCAATTTTTCAGAATG+AGG | + | chr5.2:83923244-83923263 | MS.gene65383:intron | 35.0% |
| !! | ACTTAAGCTTTGTTTGCAAG+GGG | - | chr5.2:83924215-83924234 | None:intergenic | 35.0% |
| !! | AGGTTTTGGTGATATTGGTA+TGG | + | chr5.2:83922635-83922654 | MS.gene65383:intron | 35.0% |
| !! | CACTTAAGCTTTGTTTGCAA+GGG | - | chr5.2:83924216-83924235 | None:intergenic | 35.0% |
| !! | GTTAATACATTGCCACTTTC+AGG | + | chr5.2:83923783-83923802 | MS.gene65383:intron | 35.0% |
| !! | TCTTTTGAAGATACCTTTCC+TGG | - | chr5.2:83925581-83925600 | None:intergenic | 35.0% |
| !! | TGGTCAATGGTTGATAAGTA+TGG | + | chr5.2:83923659-83923678 | MS.gene65383:intron | 35.0% |
| !! | TGTGAGTTATGAGTATTGAG+TGG | + | chr5.2:83923381-83923400 | MS.gene65383:intron | 35.0% |
| !!! | GGACGAAAAGGTATTTTCAA+TGG | + | chr5.2:83923923-83923942 | MS.gene65383:intron | 35.0% |
| !!! | TTTTGGTTCTTAAATGGGTG+AGG | - | chr5.2:83922910-83922929 | None:intergenic | 35.0% |
| !!! | TTTTTAAGTTCCCCCAAATG+AGG | + | chr5.2:83924088-83924107 | MS.gene65383:intron | 35.0% |
| AAGCCGAGTTCATCTTTCTT+AGG | - | chr5.2:83926722-83926741 | None:intergenic | 40.0% | |
| ACAATGCGTTAAGCAGTTGA+GGG | - | chr5.2:83926583-83926602 | None:intergenic | 40.0% | |
| ACTGGACAATAAACCTGATG+AGG | + | chr5.2:83923150-83923169 | MS.gene65383:CDS | 40.0% | |
| AGAAATCTCTCCTCATTTGG+GGG | - | chr5.2:83924101-83924120 | None:intergenic | 40.0% | |
| AGATCTGCCACCAATAGAAA+AGG | + | chr5.2:83925598-83925617 | MS.gene65383:CDS | 40.0% | |
| AGTAGCACAGACACTTCTAA+GGG | + | chr5.2:83925658-83925677 | MS.gene65383:intron | 40.0% | |
| ATAGCTAGGTGGAAGAAAAG+TGG | - | chr5.2:83922467-83922486 | None:intergenic | 40.0% | |
| ATAGGTTTCTGCAGATGACA+AGG | + | chr5.2:83923126-83923145 | MS.gene65383:intron | 40.0% | |
| ATGAAGACACATCCTGAATC+CGG | + | chr5.2:83926683-83926702 | MS.gene65383:intron | 40.0% | |
| ATGCGAACCACCTAAAAGAA+TGG | - | chr5.2:83926132-83926151 | None:intergenic | 40.0% | |
| CACCTAAAAGAATGGGAGAA+AGG | - | chr5.2:83926124-83926143 | None:intergenic | 40.0% | |
| CAGCAAAGCTTACTTGGATA+AGG | + | chr5.2:83926019-83926038 | MS.gene65383:CDS | 40.0% | |
| CTACAACACACAAATGCAAG+AGG | - | chr5.2:83922966-83922985 | None:intergenic | 40.0% | |
| CTTGGAGTAAACCCTCTAAT+TGG | - | chr5.2:83925191-83925210 | None:intergenic | 40.0% | |
| GACAACGTCTGACATATTCA+AGG | - | chr5.2:83922687-83922706 | None:intergenic | 40.0% | |
| GATTGAACGTAATCACGTGT+CGG | - | chr5.2:83925706-83925725 | None:intergenic | 40.0% | |
| GGAAGAAAAGTGGATACCTT+TGG | - | chr5.2:83922457-83922476 | None:intergenic | 40.0% | |
| GGACCTAAGAAAGATGAACT+CGG | + | chr5.2:83926716-83926735 | MS.gene65383:intron | 40.0% | |
| GGATTTGACCCTTGAACATA+AGG | - | chr5.2:83923572-83923591 | None:intergenic | 40.0% | |
| GTAGTGAATTTGCAATCTGG+AGG | + | chr5.2:83922982-83923001 | MS.gene65383:intron | 40.0% | |
| GTGTAAAGGTGGACAGTTAA+TGG | + | chr5.2:83922551-83922570 | MS.gene65383:intron | 40.0% | |
| GTTGAGGTGCAATTAATCGT+TGG | - | chr5.2:83926368-83926387 | None:intergenic | 40.0% | |
| TAAGAGATAGAGGAAGACCA+AGG | - | chr5.2:83924436-83924455 | None:intergenic | 40.0% | |
| TGCGAACCACCTAAAAGAAT+GGG | - | chr5.2:83926131-83926150 | None:intergenic | 40.0% | |
| TGGATACCTTTGGACAAAAG+AGG | - | chr5.2:83922447-83922466 | None:intergenic | 40.0% | |
| TGGTTGCAAGTACAGAACAA+TGG | + | chr5.2:83924797-83924816 | MS.gene65383:CDS | 40.0% | |
| TGTGGTTACAGCCTGATATT+TGG | + | chr5.2:83925161-83925180 | MS.gene65383:intron | 40.0% | |
| TTAACTGTCCACCTTTACAC+TGG | - | chr5.2:83922551-83922570 | None:intergenic | 40.0% | |
| TTGAATACCTTAGGACCAAG+TGG | - | chr5.2:83923193-83923212 | None:intergenic | 40.0% | |
| TTGACCCTTGAACATAAGGA+GGG | - | chr5.2:83923568-83923587 | None:intergenic | 40.0% | |
| TTGATATGCCAGTGTAAAGG+TGG | + | chr5.2:83922540-83922559 | MS.gene65383:intron | 40.0% | |
| TTGATTATTCTCGGAGCACA+AGG | + | chr5.2:83923344-83923363 | MS.gene65383:intron | 40.0% | |
| TTGTCTAAGCTGATACCAAG+AGG | - | chr5.2:83922397-83922416 | None:intergenic | 40.0% | |
| TTTGACCCTTGAACATAAGG+AGG | - | chr5.2:83923569-83923588 | None:intergenic | 40.0% | |
| ! | AAACAGAAGCGGTTCTGATA+AGG | - | chr5.2:83923746-83923765 | None:intergenic | 40.0% |
| ! | ATCAGAACCGCTTCTGTTTT+TGG | + | chr5.2:83923747-83923766 | MS.gene65383:intron | 40.0% |
| ! | CTCTGCAATCGATTTACGAT+CGG | + | chr5.2:83926444-83926463 | MS.gene65383:intron | 40.0% |
| ! | CTTTCTCCCATTCTTTTAGG+TGG | + | chr5.2:83926122-83926141 | MS.gene65383:intron | 40.0% |
| ! | GGTGATATTGGTATGGACTA+TGG | + | chr5.2:83922642-83922661 | MS.gene65383:intron | 40.0% |
| ! | GTGTTTTCCAATTGTCAGCA+TGG | + | chr5.2:83922819-83922838 | MS.gene65383:intron | 40.0% |
| ! | TAGACAACTCTTGTTTGCCT+GGG | + | chr5.2:83922410-83922429 | MS.gene65383:CDS | 40.0% |
| ! | TCTGCAATCGATTTACGATC+GGG | + | chr5.2:83926445-83926464 | MS.gene65383:intron | 40.0% |
| ! | TTAGACAACTCTTGTTTGCC+TGG | + | chr5.2:83922409-83922428 | MS.gene65383:CDS | 40.0% |
| ! | TTGACCTGGTGGATCATTAT+CGG | - | chr5.2:83926166-83926185 | None:intergenic | 40.0% |
| !! | AGGTGTTTTAGACCTACATG+TGG | + | chr5.2:83923002-83923021 | MS.gene65383:CDS | 40.0% |
| !! | GTTTTAGACCTACATGTGGT+TGG | + | chr5.2:83923006-83923025 | MS.gene65383:CDS | 40.0% |
| !! | TATGTGCGTGGTTTAGTTCT+TGG | + | chr5.2:83924681-83924700 | MS.gene65383:intron | 40.0% |
| AAACCTGATGAGGAGAGCTT+AGG | + | chr5.2:83923160-83923179 | MS.gene65383:CDS | 45.0% | |
| AACCTGATGAGGAGAGCTTA+GGG | + | chr5.2:83923161-83923180 | MS.gene65383:CDS | 45.0% | |
| AAGCACAAAGTGGAACCTCT+TGG | + | chr5.2:83922379-83922398 | MS.gene65383:intron | 45.0% | |
| AAGCTTTCACTTGAAGAGGC+TGG | + | chr5.2:83925521-83925540 | MS.gene65383:CDS | 45.0% | |
| AAGGTGGACAGTTAATGGAG+AGG | + | chr5.2:83922556-83922575 | MS.gene65383:CDS | 45.0% | |
| AGTGGGTACCAAGGAAGTTA+AGG | + | chr5.2:83923690-83923709 | MS.gene65383:intron | 45.0% | |
| ATAAAGGAAAATGGGAGGGG+AGG | - | chr5.2:83924152-83924171 | None:intergenic | 45.0% | |
| ATCTGACTAGCACCTGAAAG+TGG | - | chr5.2:83923798-83923817 | None:intergenic | 45.0% | |
| ATTGTTACTGCAGGGAATCC+AGG | - | chr5.2:83926397-83926416 | None:intergenic | 45.0% | |
| CACAATGCGTTAAGCAGTTG+AGG | - | chr5.2:83926584-83926603 | None:intergenic | 45.0% | |
| CACCAGACATGACACTTACA+CGG | - | chr5.2:83925766-83925785 | None:intergenic | 45.0% | |
| CAGCTTAAGTCATAGCTAGG+TGG | - | chr5.2:83922478-83922497 | None:intergenic | 45.0% | |
| CAGGTGGTTCCTTTATTGTG+TGG | + | chr5.2:83924957-83924976 | MS.gene65383:intron | 45.0% | |
| CAGTAGCACAGACACTTCTA+AGG | + | chr5.2:83925657-83925676 | MS.gene65383:intron | 45.0% | |
| CATGCAAGCATGGTTTGAAC+TGG | - | chr5.2:83924849-83924868 | None:intergenic | 45.0% | |
| CCTTTGGACAAAAGAGGTTG+TGG | - | chr5.2:83922441-83922460 | None:intergenic | 45.0% | |
| CTACCCCTCCTTATGTTCAA+GGG | + | chr5.2:83923561-83923580 | MS.gene65383:intron | 45.0% | |
| CTAGCTATGACTTAAGCTGC+AGG | + | chr5.2:83922479-83922498 | MS.gene65383:intron | 45.0% | |
| CTGCAGCTTAAGTCATAGCT+AGG | - | chr5.2:83922481-83922500 | None:intergenic | 45.0% | |
| CTTTAGCTGAAGAGCTAGCA+CGG | + | chr5.2:83926187-83926206 | MS.gene65383:CDS | 45.0% | |
| GACTTAAGCTGCAGGTAACA+GGG | + | chr5.2:83922487-83922506 | MS.gene65383:intron | 45.0% | |
| GATTGTTACGAGTAACTGCG+TGG | - | chr5.2:83926421-83926440 | None:intergenic | 45.0% | |
| GGTTACAGCCTGATATTTGG+AGG | + | chr5.2:83925164-83925183 | MS.gene65383:intron | 45.0% | |
| GTATGTTCAAGTGGGTACCA+AGG | + | chr5.2:83923681-83923700 | MS.gene65383:intron | 45.0% | |
| GTGGAACAGCAAAGCTTACT+TGG | + | chr5.2:83926013-83926032 | MS.gene65383:CDS | 45.0% | |
| TCTACCCCTCCTTATGTTCA+AGG | + | chr5.2:83923560-83923579 | MS.gene65383:intron | 45.0% | |
| TCTTCAGCTAAAGCTTGACC+TGG | - | chr5.2:83926180-83926199 | None:intergenic | 45.0% | |
| TGACCCTTGAACATAAGGAG+GGG | - | chr5.2:83923567-83923586 | None:intergenic | 45.0% | |
| TGACTTAAGCTGCAGGTAAC+AGG | + | chr5.2:83922486-83922505 | MS.gene65383:intron | 45.0% | |
| TGCAGTAGTAGTGTGGTCAA+TGG | + | chr5.2:83923646-83923665 | MS.gene65383:intron | 45.0% | |
| TGCGTGGTATTGTTACTGCA+GGG | - | chr5.2:83926405-83926424 | None:intergenic | 45.0% | |
| TGGACAGCCAAAAACAGAAG+CGG | - | chr5.2:83923757-83923776 | None:intergenic | 45.0% | |
| TTAGGTGGTTCGCATTATCC+TGG | + | chr5.2:83926137-83926156 | MS.gene65383:intron | 45.0% | |
| TTCATAACCAGTTAGGCAGG+TGG | + | chr5.2:83924941-83924960 | MS.gene65383:intron | 45.0% | |
| TTCTGCAGATGACAAGGAAC+TGG | + | chr5.2:83923132-83923151 | MS.gene65383:CDS | 45.0% | |
| ! | CCACAACCTCTTTTGTCCAA+AGG | + | chr5.2:83922438-83922457 | MS.gene65383:CDS | 45.0% |
| ! | CTTCTAAGGGAATGTGTGTC+CGG | + | chr5.2:83925671-83925690 | MS.gene65383:intron | 45.0% |
| ! | GATGGTAGCCTTAACTTCCT+TGG | - | chr5.2:83923701-83923720 | None:intergenic | 45.0% |
| !! | AAGCTTTGTTTGCAAGGGGA+AGG | - | chr5.2:83924211-83924230 | None:intergenic | 45.0% |
| !! | AGCTTTGTTTGCAAGGGGAA+GGG | - | chr5.2:83924210-83924229 | None:intergenic | 45.0% |
| !! | AGTAAGCTTTGCTGTTCCAC+AGG | - | chr5.2:83926013-83926032 | None:intergenic | 45.0% |
| !! | GAAGGGAGGCTTTGGAAAAA+AGG | - | chr5.2:83924193-83924212 | None:intergenic | 45.0% |
| !!! | TATGATTTTTTTTTTTTTTT+TGG | + | chr5.2:83925225-83925244 | MS.gene65383:intron | 5.0% |
| AAAATGGGAGGGGAGGACTT+TGG | - | chr5.2:83924145-83924164 | None:intergenic | 50.0% | |
| AAAGGAACCACCTGCCTAAC+TGG | - | chr5.2:83924951-83924970 | None:intergenic | 50.0% | |
| AAATGGGAGGGGAGGACTTT+GGG | - | chr5.2:83924144-83924163 | None:intergenic | 50.0% | |
| AACCCTAAGCTCTCCTCATC+AGG | - | chr5.2:83923166-83923185 | None:intergenic | 50.0% | |
| AAGAGGTTGTGGTAGTTCCC+AGG | - | chr5.2:83922430-83922449 | None:intergenic | 50.0% | |
| AAGGCAACTCTCGGACGAAA+AGG | + | chr5.2:83923911-83923930 | MS.gene65383:CDS | 50.0% | |
| AGCTTAGGGTTGGAACCACT+TGG | + | chr5.2:83923175-83923194 | MS.gene65383:CDS | 50.0% | |
| CTGCGTGGTATTGTTACTGC+AGG | - | chr5.2:83926406-83926425 | None:intergenic | 50.0% | |
| CTTAGGTCCATTATGAGCGC+CGG | - | chr5.2:83926705-83926724 | None:intergenic | 50.0% | |
| GCTACCGATAATGATCCACC+AGG | + | chr5.2:83926159-83926178 | MS.gene65383:CDS | 50.0% | |
| GGAATCCAGGTCTGTAGTTG+AGG | - | chr5.2:83926384-83926403 | None:intergenic | 50.0% | |
| GTCCGTGTAAGTGTCATGTC+TGG | + | chr5.2:83925761-83925780 | MS.gene65383:intron | 50.0% | |
| GTGGATCATTATCGGTAGCC+AGG | - | chr5.2:83926158-83926177 | None:intergenic | 50.0% | |
| GTTGGAACCACTTGGTCCTA+AGG | + | chr5.2:83923183-83923202 | MS.gene65383:CDS | 50.0% | |
| TCAGCTAAAGCTTGACCTGG+TGG | - | chr5.2:83926177-83926196 | None:intergenic | 50.0% | |
| TGAATGACCTTTCTCGCCCA+AGG | - | chr5.2:83926215-83926234 | None:intergenic | 50.0% | |
| TGATGAGGAGAGCTTAGGGT+TGG | + | chr5.2:83923165-83923184 | MS.gene65383:CDS | 50.0% | |
| TTACACGGACACGTTGAGAC+TGG | - | chr5.2:83925751-83925770 | None:intergenic | 50.0% | |
| TTGCACCTCAACTACAGACC+TGG | + | chr5.2:83926376-83926395 | MS.gene65383:intron | 50.0% | |
| TTTGTTTGCAAGGGGAAGGG+AGG | - | chr5.2:83924207-83924226 | None:intergenic | 50.0% | |
| ! | ACGTAATCACGTGTCGGTGT+CGG | - | chr5.2:83925700-83925719 | None:intergenic | 50.0% |
| AATGGGAGGGGAGGACTTTG+GGG | - | chr5.2:83924143-83924162 | None:intergenic | 55.0% | |
| ACCTTTCCTGGTGCACCATC+AGG | - | chr5.2:83925569-83925588 | None:intergenic | 55.0% | |
| AGACCTACATGTGGTTGGGC+TGG | + | chr5.2:83923011-83923030 | MS.gene65383:CDS | 55.0% | |
| CCTGAATCCGGCGCTCATAA+TGG | + | chr5.2:83926695-83926714 | MS.gene65383:intron | 55.0% | |
| TGACCAGCCCAACCACATGT+AGG | - | chr5.2:83923017-83923036 | None:intergenic | 55.0% | |
| TTGCGCTCGAACTTGCAGCT+TGG | + | chr5.2:83926332-83926351 | MS.gene65383:intron | 55.0% | |
| ! | AGTGTTCCTGATGGTGCACC+AGG | + | chr5.2:83925560-83925579 | MS.gene65383:CDS | 55.0% |
| ! | TCCTGATGGTGCACCAGGAA+AGG | + | chr5.2:83925565-83925584 | MS.gene65383:CDS | 55.0% |
| !! | CCATTATGAGCGCCGGATTC+AGG | - | chr5.2:83926698-83926717 | None:intergenic | 55.0% |
| !! | TACATGTGGTTGGGCTGGTC+AGG | + | chr5.2:83923016-83923035 | MS.gene65383:CDS | 55.0% |
| !! | TCAGGTGTTGGCAAGTACGC+TGG | + | chr5.2:83926766-83926785 | MS.gene65383:intron | 55.0% |
| AAGAGCTAGCACGGCGCCTT+GGG | + | chr5.2:83926196-83926215 | MS.gene65383:CDS | 60.0% | |
| ATGGGAGGGGAGGACTTTGG+GGG | - | chr5.2:83924142-83924161 | None:intergenic | 60.0% | |
| TGCAAGGGGAAGGGAGGCTT+TGG | - | chr5.2:83924201-83924220 | None:intergenic | 60.0% | |
| GAAGAGCTAGCACGGCGCCT+TGG | + | chr5.2:83926195-83926214 | MS.gene65383:CDS | 65.0% | |
| !! | CACGTGTCGGTGTCGGACAC+CGG | - | chr5.2:83925693-83925712 | None:intergenic | 65.0% |
| CACGGCGCCTTGGGCGAGAA+AGG | + | chr5.2:83926205-83926224 | MS.gene65383:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 83922308 | 83926836 | 83922308 | ID=MS.gene65383 |
| chr5.2 | mRNA | 83922308 | 83926836 | 83922308 | ID=MS.gene65383.t1;Parent=MS.gene65383 |
| chr5.2 | exon | 83922308 | 83922310 | 83922308 | ID=MS.gene65383.t1.exon1;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83922308 | 83922310 | 83922308 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83922382 | 83922459 | 83922382 | ID=MS.gene65383.t1.exon2;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83922382 | 83922459 | 83922382 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83922552 | 83922607 | 83922552 | ID=MS.gene65383.t1.exon3;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83922552 | 83922607 | 83922552 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83922986 | 83923037 | 83922986 | ID=MS.gene65383.t1.exon4;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83922986 | 83923037 | 83922986 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83923130 | 83923204 | 83923130 | ID=MS.gene65383.t1.exon5;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83923130 | 83923204 | 83923130 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83923852 | 83923932 | 83923852 | ID=MS.gene65383.t1.exon6;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83923852 | 83923932 | 83923852 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83924756 | 83924836 | 83924756 | ID=MS.gene65383.t1.exon7;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83924756 | 83924836 | 83924756 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83925322 | 83925387 | 83925322 | ID=MS.gene65383.t1.exon8;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83925322 | 83925387 | 83925322 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83925503 | 83925619 | 83925503 | ID=MS.gene65383.t1.exon9;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83925503 | 83925619 | 83925503 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83925993 | 83926040 | 83925993 | ID=MS.gene65383.t1.exon10;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83925993 | 83926040 | 83925993 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83926141 | 83926226 | 83926141 | ID=MS.gene65383.t1.exon11;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83926141 | 83926226 | 83926141 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| chr5.2 | exon | 83926770 | 83926836 | 83926770 | ID=MS.gene65383.t1.exon12;Parent=MS.gene65383.t1 |
| chr5.2 | CDS | 83926770 | 83926836 | 83926770 | ID=cds.MS.gene65383.t1;Parent=MS.gene65383.t1 |
| Gene Sequence |
| Protein sequence |
