AlfalfaGEDB | MS.gene65458

M. sativa cultivar XinJiangDaYe / MS.gene65458

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65458.t1	XP_013467077.1	97.3	113	3	0	1	113	1	113	1.10E-55	225.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65458.t1	Q9FNL8	69.6	112	32	1	1	112	1	110	1.9e-40	166.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65458.t1	A0A072VH07	97.3	113	3	0	1	113	1	113	7.7e-56	225.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene051544	MS.gene65458	0.821875	3.20E-53	-1.69E-46
MS.gene052902	MS.gene65458	0.830142	3.47E-55	-1.69E-46
MS.gene053356	MS.gene65458	0.92725	1.53E-91	-1.69E-46
MS.gene058426	MS.gene65458	0.819789	9.66E-53	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65458.t1	MTR_1g041875	97.345	113	3	0	1	113	1	113	2.64e-74	230
MS.gene65458.t1	MTR_1g042310	79.464	112	20	1	1	112	1	109	1.68e-60	194
MS.gene65458.t1	MTR_1g075440	74.107	112	28	1	3	113	1	112	9.82e-57	184
MS.gene65458.t1	MTR_1g041815	71.818	110	31	0	3	112	1	110	2.21e-54	178
MS.gene65458.t1	MTR_1g041835	70.000	110	33	0	3	112	1	110	2.19e-53	176
MS.gene65458.t1	MTR_7g098180	68.807	109	34	0	4	112	6	114	3.29e-50	167
MS.gene65458.t1	MTR_7g098160	67.961	103	33	0	10	112	14	116	2.35e-48	162
MS.gene65458.t1	MTR_7g098150	67.961	103	33	0	10	112	14	116	5.10e-48	160
MS.gene65458.t1	MTR_7g098090	67.961	103	33	0	10	112	14	116	7.20e-48	161
MS.gene65458.t1	MTR_7g098220	65.455	110	38	0	3	112	4	113	1.06e-47	160
MS.gene65458.t1	MTR_7g098200	67.647	102	33	0	10	111	10	111	1.41e-45	155
MS.gene65458.t1	MTR_7g098200	67.647	102	33	0	10	111	10	111	1.44e-45	155
MS.gene65458.t1	MTR_7g098040	66.667	102	34	0	10	111	15	116	1.77e-44	152
MS.gene65458.t1	MTR_3g072300	58.252	103	43	0	10	112	5	107	6.07e-39	137
MS.gene65458.t1	MTR_1g042310	79.167	72	15	0	41	112	1	72	1.48e-36	130
MS.gene65458.t1	MTR_1g041885	87.879	66	8	0	48	113	1	66	8.06e-36	128
MS.gene65458.t1	MTR_3g462710	48.182	110	54	1	3	112	1	107	5.84e-33	120
MS.gene65458.t1	MTR_1g042310	80.000	65	13	0	48	112	1	65	2.13e-32	119
MS.gene65458.t1	MTR_3g005010	50.000	100	50	0	13	112	14	113	1.09e-29	111
MS.gene65458.t1	MTR_7g098230	68.000	75	24	0	37	111	34	108	1.10e-28	108
MS.gene65458.t1	MTR_7g098220	66.667	69	23	0	44	112	1	69	5.36e-28	106
MS.gene65458.t1	MTR_7g067010	45.545	101	55	0	12	112	7	107	1.28e-27	105
MS.gene65458.t1	MTR_4g015080	44.037	109	57	1	4	112	13	117	6.15e-27	103
MS.gene65458.t1	MTR_4g033395	42.857	98	56	0	15	112	18	115	2.09e-25	99.0
MS.gene65458.t1	MTR_7g065080	44.118	102	57	0	11	112	13	114	5.52e-25	98.2
MS.gene65458.t1	MTR_3g069500	43.878	98	55	0	15	112	21	118	1.13e-24	97.4
MS.gene65458.t1	MTR_4g033375	41.837	98	57	0	15	112	18	115	3.10e-24	95.9
MS.gene65458.t1	MTR_0294s0020	43.750	96	54	0	13	108	15	110	9.13e-24	94.7
MS.gene65458.t1	MTR_4g033310	42.553	94	54	0	15	108	17	110	1.55e-23	94.0
MS.gene65458.t1	MTR_4g019580	40.196	102	61	0	11	112	18	119	1.83e-23	94.0
MS.gene65458.t1	MTR_3g069420	39.394	99	60	0	15	113	20	118	1.92e-23	94.0
MS.gene65458.t1	MTR_4g033315	42.553	94	54	0	15	108	17	110	2.21e-23	93.6
MS.gene65458.t1	MTR_4g033310	42.553	94	54	0	15	108	17	110	2.21e-23	93.6
MS.gene65458.t1	MTR_4g033325	43.617	94	53	0	15	108	17	110	1.32e-22	91.3
MS.gene65458.t1	MTR_4g033330	41.489	94	55	0	15	108	17	110	2.47e-22	90.5
MS.gene65458.t1	MTR_3g069440	41.489	94	55	0	15	108	19	112	1.09e-21	89.0
MS.gene65458.t1	MTR_4g024930	37.963	108	66	1	4	111	12	118	3.26e-20	84.7
MS.gene65458.t1	MTR_3g112460	31.429	105	72	0	7	111	1	105	8.72e-20	83.6
MS.gene65458.t1	MTR_7g006540	41.667	108	61	2	8	113	40	147	9.21e-20	83.2
MS.gene65458.t1	MTR_8g038880	45.882	85	46	0	28	112	19	103	1.40e-19	82.8
MS.gene65458.t1	MTR_5g014150	33.981	103	68	0	10	112	25	127	2.42e-19	82.0
MS.gene65458.t1	MTR_5g012290	44.565	92	51	0	19	110	17	108	8.61e-19	80.5
MS.gene65458.t1	MTR_3g014790	39.796	98	57	1	15	112	5	100	1.15e-18	80.1
MS.gene65458.t1	MTR_4g101380	43.478	92	52	0	19	110	17	108	5.67e-18	78.2
MS.gene65458.t1	MTR_3g112470	31.429	105	72	0	7	111	1	105	6.59e-18	78.2
MS.gene65458.t1	MTR_3g112450	31.373	102	70	0	10	111	4	105	3.58e-17	75.9
MS.gene65458.t1	MTR_7g010820	36.000	100	64	0	13	112	10	109	3.77e-17	75.9
MS.gene65458.t1	MTR_5g012270	37.383	107	61	1	4	110	10	110	4.75e-17	75.5
MS.gene65458.t1	MTR_4g098800	35.052	97	63	0	10	106	17	113	6.01e-17	75.5
MS.gene65458.t1	MTR_4g098800	35.052	97	63	0	10	106	82	178	6.63e-17	75.1
MS.gene65458.t1	MTR_5g038060	41.860	86	50	0	27	112	29	114	1.11e-16	74.7
MS.gene65458.t1	MTR_7g088790	31.532	111	76	0	1	111	1	111	2.11e-16	73.9
MS.gene65458.t1	MTR_8g469480	40.741	81	48	0	32	112	41	121	4.63e-16	72.8
MS.gene65458.t1	MTR_7g088825	33.333	111	67	1	1	111	1	104	7.04e-16	72.4
MS.gene65458.t1	MTR_7g013270	36.782	87	55	0	20	106	81	167	1.60e-15	71.2
MS.gene65458.t1	MTR_1g116930	35.000	100	65	0	7	106	1	100	2.87e-15	70.5
MS.gene65458.t1	MTR_4g107670	34.906	106	66	1	3	108	1	103	4.75e-15	70.1
MS.gene65458.t1	MTR_7g098210	53.125	64	15	1	48	111	1	49	7.01e-15	69.3
MS.gene65458.t1	MTR_2g005130	31.858	113	77	0	1	113	12	124	2.17e-14	68.2
MS.gene65458.t1	MTR_7g098080	59.184	49	17	1	34	79	13	61	2.66e-14	62.8
MS.gene65458.t1	MTR_5g038380	39.796	98	59	0	15	112	14	111	3.87e-14	67.4
MS.gene65458.t1	MTR_8g469470	28.155	103	74	0	10	112	13	115	8.12e-14	66.2
MS.gene65458.t1	MTR_5g055000	31.868	91	62	0	21	111	10	100	1.57e-13	65.5
MS.gene65458.t1	MTR_1g026750	35.000	80	52	0	26	105	15	94	3.18e-13	64.7
MS.gene65458.t1	MTR_7g064160	31.429	105	70	1	3	105	1	105	3.79e-13	61.2
MS.gene65458.t1	MTR_7g005930	38.158	76	47	0	31	106	37	112	5.83e-13	63.9
MS.gene65458.t1	MTR_7g498330	61.905	42	15	1	11	52	11	51	8.59e-13	58.5
MS.gene65458.t1	MTR_1g026770	37.179	78	49	0	28	105	14	91	8.82e-13	63.5
MS.gene65458.t1	MTR_7g088820	31.776	107	68	2	8	111	3	107	9.31e-13	63.5
MS.gene65458.t1	MTR_5g038190	32.979	94	63	0	20	113	15	108	3.62e-12	61.6
MS.gene65458.t1	MTR_4g114340	37.624	101	60	1	3	103	1	98	9.93e-12	60.5
MS.gene65458.t1	MTR_1g026740	35.616	73	47	0	31	103	19	91	1.12e-11	60.5
MS.gene65458.t1	MTR_5g085850	38.542	96	59	0	15	110	16	111	1.27e-11	60.1
MS.gene65458.t1	MTR_7g064780	27.184	103	75	0	10	112	7	109	2.90e-11	59.3
MS.gene65458.t1	MTR_6g008690	38.462	78	48	0	35	112	13	90	4.32e-11	58.5
MS.gene65458.t1	MTR_8g469310	35.789	95	61	0	16	110	13	107	6.35e-11	58.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene65458.t1	AT5G46040	69.643	112	32	1	1	112	1	110	3.16e-51	170
MS.gene65458.t1	AT5G46050	68.142	113	34	1	1	113	1	111	1.11e-48	163
MS.gene65458.t1	AT2G40460	60.396	101	40	0	12	112	7	107	5.82e-40	139
MS.gene65458.t1	AT2G02040	47.788	113	56	1	3	112	12	124	7.39e-33	120
MS.gene65458.t1	AT3G54140	47.748	111	55	1	3	113	1	108	2.66e-32	118
MS.gene65458.t1	AT3G54140	47.748	111	55	1	3	113	1	108	2.66e-32	118
MS.gene65458.t1	AT5G01180	48.039	102	53	0	12	113	8	109	1.37e-29	111
MS.gene65458.t1	AT5G01180	48.039	102	53	0	12	113	8	109	1.37e-29	111
MS.gene65458.t1	AT5G01180	48.039	102	53	0	12	113	8	109	1.37e-29	111
MS.gene65458.t1	AT2G02020	42.241	116	64	1	1	113	11	126	1.85e-29	110
MS.gene65458.t1	AT2G02020	42.241	116	64	1	1	113	11	126	2.14e-29	110
MS.gene65458.t1	AT1G62200	43.878	98	55	0	14	111	37	134	6.05e-25	98.2
MS.gene65458.t1	AT1G62200	43.878	98	55	0	14	111	37	134	6.25e-25	98.2
MS.gene65458.t1	AT1G62200	43.878	98	55	0	14	111	51	148	6.62e-25	98.2
MS.gene65458.t1	AT2G37900	40.777	103	61	0	10	112	19	121	1.34e-24	97.1
MS.gene65458.t1	AT3G53960	41.748	103	60	0	10	112	18	120	4.06e-24	95.9
MS.gene65458.t1	AT1G22570	44.762	105	57	1	4	108	6	109	7.41e-24	95.1
MS.gene65458.t1	AT1G22550	43.519	108	60	1	1	108	3	109	9.83e-24	94.7
MS.gene65458.t1	AT3G54450	46.512	86	45	1	27	112	11	95	8.05e-22	89.4
MS.gene65458.t1	AT1G72120	43.519	108	60	1	5	112	6	112	4.94e-21	87.0
MS.gene65458.t1	AT1G72140	35.780	109	70	0	4	112	9	117	9.85e-21	86.3
MS.gene65458.t1	AT1G22540	42.708	96	55	0	17	112	18	113	2.99e-20	84.7
MS.gene65458.t1	AT1G72125	44.762	105	57	1	8	112	9	112	1.30e-19	82.8
MS.gene65458.t1	AT1G32450	35.577	104	67	0	9	112	17	120	2.85e-19	82.0
MS.gene65458.t1	AT1G12110	42.391	92	53	0	19	110	17	108	4.39e-19	81.6
MS.gene65458.t1	AT1G72130	40.952	105	55	2	8	112	11	108	1.22e-18	80.1
MS.gene65458.t1	AT5G13400	41.121	107	61	2	8	112	41	147	6.65e-18	78.2
MS.gene65458.t1	AT4G21680	36.170	94	60	0	13	106	12	105	2.43e-17	76.6
MS.gene65458.t1	AT1G22570	55.556	63	28	0	46	108	10	72	7.67e-17	75.1
MS.gene65458.t1	AT1G69870	39.080	87	53	0	26	112	48	134	3.24e-16	73.2
MS.gene65458.t1	AT1G59740	33.981	103	68	0	11	113	23	125	3.41e-15	70.5
MS.gene65458.t1	AT1G68570	37.647	85	52	1	27	111	22	105	6.88e-14	66.6
MS.gene65458.t1	AT5G19640	36.585	82	52	0	31	112	61	142	1.37e-13	65.9
MS.gene65458.t1	AT5G28470	33.735	83	55	0	24	106	12	94	4.63e-13	64.3
MS.gene65458.t1	AT5G28470	33.735	83	55	0	24	106	12	94	4.68e-13	64.3
MS.gene65458.t1	AT1G68570	39.706	68	41	0	44	111	8	75	1.10e-12	63.2
MS.gene65458.t1	AT5G62730	31.915	94	64	0	15	108	42	135	3.31e-12	62.0
MS.gene65458.t1	AT3G01350	36.782	87	54	1	26	111	3	89	4.86e-12	61.2
MS.gene65458.t1	AT5G14940	34.118	85	56	0	27	111	5	89	9.30e-12	60.5
MS.gene65458.t1	AT1G69860	31.395	86	59	0	27	112	16	101	1.37e-11	60.1
MS.gene65458.t1	AT3G25260	34.091	88	58	0	19	106	11	98	1.56e-11	60.1
MS.gene65458.t1	AT2G26690	35.870	92	59	0	12	103	7	98	2.86e-11	59.3
MS.gene65458.t1	AT1G69850	35.106	94	61	0	15	108	11	104	5.28e-11	58.5

Find 23 sgRNAs with CRISPR-Local

Find 51 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTGAAAGAATTGCTTATTT+TGG	0.103448	1.1:+25847455	MS.gene65458:CDS
GATGGAACTATTGATCTTAA+AGG	0.228746	1.1:+25846673	MS.gene65458:CDS
AGCAATATAAGCACCTAATA+TGG	0.230184	1.1:-25847582	None:intergenic
CTTCCAACAATGTCAACAAT+TGG	0.331479	1.1:+25847537	MS.gene65458:CDS
ATGCTCATCTTGGACGCTAT+TGG	0.389843	1.1:+25847606	MS.gene65458:CDS
AGCTTTCCAACCACCTGTCT+TGG	0.404551	1.1:-25846713	None:intergenic
TATATTGCTGATGCTCATCT+TGG	0.415388	1.1:+25847596	MS.gene65458:CDS
TTCTGCCTTTGTTTATCTAT+CGG	0.418528	1.1:+25847640	MS.gene65458:CDS
AACCCAATTGTTGACATTGT+TGG	0.426281	1.1:-25847540	None:intergenic
AAAGCTTGCTCATTTCTTGT+TGG	0.433680	1.1:+25846730	MS.gene65458:CDS
GCAATATAAGCACCTAATAT+GGG	0.438247	1.1:-25847581	None:intergenic
GCAATGGAAGAAGGCATGAT+TGG	0.445717	1.1:+25846634	MS.gene65458:CDS
TTCCAACAATGTCAACAATT+GGG	0.470599	1.1:+25847538	MS.gene65458:CDS
GGAAATGAGTACACAAAAGA+TGG	0.476556	1.1:+25846655	MS.gene65458:CDS
AATATTATGGCAATGGAAGA+AGG	0.492661	1.1:+25846625	None:intergenic
AACAATGTCAACAATTGGGT+TGG	0.530864	1.1:+25847542	MS.gene65458:CDS
TCATGTCTACTGCAGTGTAT+GGG	0.587588	1.1:+25847429	MS.gene65458:intron
TCAGATCCAAGACAGGTGGT+TGG	0.608354	1.1:+25846707	MS.gene65458:CDS
TCTGTTCTCAGATCCAAGAC+AGG	0.609180	1.1:+25846700	MS.gene65458:CDS
TGGAAGAGATGACAGTGCCT+TGG	0.622263	1.1:-25847520	None:intergenic
ACATACCGATAGATAAACAA+AGG	0.660655	1.1:-25847645	None:intergenic
GTTCTCAGATCCAAGACAGG+TGG	0.678500	1.1:+25846703	MS.gene65458:CDS
TTGACAAAGAAGCTTCACCA+AGG	0.708677	1.1:+25847503	MS.gene65458:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAACAATTCAATTAAA+TGG	-	chr1.1:25847396-25847415	None:intergenic	10.0%
!!	AATAATTGAACAATATATAT+AGG	-	chr1.1:25846847-25846866	None:intergenic	10.0%
!!	AATTAACAATTCAATTAAAT+GGG	-	chr1.1:25847395-25847414	None:intergenic	10.0%
!!	AAAATATGTTAATTGTACTA+AGG	-	chr1.1:25846870-25846889	None:intergenic	15.0%
!!	ATAAAAAATAAGAGACATTA+TGG	+	chr1.1:25847046-25847065	MS.gene65458:intron	15.0%
!!	TAAAGATTATAAATAATCCA+CGG	-	chr1.1:25847024-25847043	None:intergenic	15.0%
!!!	AAGATAAAATTTTAGATTAG+AGG	-	chr1.1:25847244-25847263	None:intergenic	15.0%
!!	AAACTTATCAACAACATATA+AGG	-	chr1.1:25847350-25847369	None:intergenic	20.0%
!!	ATTCAATTAAATGGGTAATA+TGG	-	chr1.1:25847387-25847406	None:intergenic	20.0%
!!	TTCACTAGAAAAATGTTATT+CGG	+	chr1.1:25846789-25846808	MS.gene65458:intron	20.0%
!!	TTTACCAACAAAGAAAATAA+TGG	+	chr1.1:25847262-25847281	MS.gene65458:intron	20.0%
!!!	TTTGAAAGAATTGCTTATTT+TGG	+	chr1.1:25847455-25847474	MS.gene65458:CDS	20.0%
!	AAAAAAATGCCGAAATTGTT+TGG	+	chr1.1:25846980-25846999	MS.gene65458:intron	25.0%
!	ATTTGTAAGCAAAAACCTTA+AGG	+	chr1.1:25847098-25847117	MS.gene65458:intron	25.0%
!	TTACACTCTATAAGAGTAAA+TGG	-	chr1.1:25847162-25847181	None:intergenic	25.0%
!!	ATGACCATTATTTTCTTTGT+TGG	-	chr1.1:25847269-25847288	None:intergenic	25.0%
!!!	AACAATTTCGGCATTTTTTT+CGG	-	chr1.1:25846980-25846999	None:intergenic	25.0%
	ACCTTAAGGAGTTATCTTAT+TGG	+	chr1.1:25847112-25847131	MS.gene65458:intron	30.0%
	AGCAATATAAGCACCTAATA+TGG	-	chr1.1:25847585-25847604	None:intergenic	30.0%
	AGGTAGATTAAATTGTACTG+TGG	-	chr1.1:25846827-25846846	None:intergenic	30.0%
	CCTTAAGGAGTTATCTTATT+GGG	+	chr1.1:25847113-25847132	MS.gene65458:intron	30.0%
	GATGGAACTATTGATCTTAA+AGG	+	chr1.1:25846673-25846692	MS.gene65458:CDS	30.0%
	GCAATATAAGCACCTAATAT+GGG	-	chr1.1:25847584-25847603	None:intergenic	30.0%
	TTCCAACAATGTCAACAATT+GGG	+	chr1.1:25847538-25847557	MS.gene65458:CDS	30.0%
	TTGATCTTCTTAAGCAAAGT+TGG	-	chr1.1:25847305-25847324	None:intergenic	30.0%
!	GTTTTTATGACTCCCATATT+AGG	+	chr1.1:25847569-25847588	MS.gene65458:CDS	30.0%
	AAATGCCGAAATTGTTTGGT+CGG	+	chr1.1:25846984-25847003	MS.gene65458:intron	35.0%
	AACAATGTCAACAATTGGGT+TGG	+	chr1.1:25847542-25847561	MS.gene65458:CDS	35.0%
	AACCCAATTGTTGACATTGT+TGG	-	chr1.1:25847543-25847562	None:intergenic	35.0%
	AAGATCAAAGCATGCTCATT+AGG	+	chr1.1:25847317-25847336	MS.gene65458:intron	35.0%
	CCCAATAAGATAACTCCTTA+AGG	-	chr1.1:25847116-25847135	None:intergenic	35.0%
	CTTCCAACAATGTCAACAAT+TGG	+	chr1.1:25847537-25847556	MS.gene65458:CDS	35.0%
	GGAAATGAGTACACAAAAGA+TGG	+	chr1.1:25846655-25846674	MS.gene65458:CDS	35.0%
	TATATTGCTGATGCTCATCT+TGG	+	chr1.1:25847596-25847615	MS.gene65458:CDS	35.0%
	TATGACCGACCAAACAATTT+CGG	-	chr1.1:25846992-25847011	None:intergenic	35.0%
	TTTCTCTCTCACACACTTTA+TGG	+	chr1.1:25846758-25846777	MS.gene65458:intron	35.0%
!	AAAGCTTGCTCATTTCTTGT+TGG	+	chr1.1:25846730-25846749	MS.gene65458:CDS	35.0%
!!!	GCATTTTTTTCGGTTGAGTT+AGG	-	chr1.1:25846970-25846989	None:intergenic	35.0%
	TCATGTCTACTGCAGTGTAT+GGG	+	chr1.1:25847429-25847448	MS.gene65458:intron	40.0%
	TTCATGTCTACTGCAGTGTA+TGG	+	chr1.1:25847428-25847447	MS.gene65458:intron	40.0%
	TTGACAAAGAAGCTTCACCA+AGG	+	chr1.1:25847503-25847522	MS.gene65458:CDS	40.0%
!!	TTTTTCGGTTGAGTTAGGAC+AGG	-	chr1.1:25846965-25846984	None:intergenic	40.0%
	ATGCTCATCTTGGACGCTAT+TGG	+	chr1.1:25847606-25847625	MS.gene65458:CDS	45.0%
	TCTGTTCTCAGATCCAAGAC+AGG	+	chr1.1:25846700-25846719	MS.gene65458:CDS	45.0%
!	GCAATGGAAGAAGGCATGAT+TGG	+	chr1.1:25846634-25846653	MS.gene65458:CDS	45.0%
!!	TAATATCTAATAAAATATAA+TGG	+	chr1.1:25847197-25847216	MS.gene65458:intron	5.0%
	AGCTTTCCAACCACCTGTCT+TGG	-	chr1.1:25846716-25846735	None:intergenic	50.0%
	CGGTCATATCGATATGACCG+TGG	+	chr1.1:25847004-25847023	MS.gene65458:intron	50.0%
	GTTCTCAGATCCAAGACAGG+TGG	+	chr1.1:25846703-25846722	MS.gene65458:CDS	50.0%
	TCAGATCCAAGACAGGTGGT+TGG	+	chr1.1:25846707-25846726	MS.gene65458:CDS	50.0%
	TGGAAGAGATGACAGTGCCT+TGG	-	chr1.1:25847523-25847542	None:intergenic	50.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	25846631	25847661	25846631	ID=MS.gene65458
chr1.1	mRNA	25846631	25847661	25846631	ID=MS.gene65458.t1;Parent=MS.gene65458
chr1.1	exon	25846631	25846751	25846631	ID=MS.gene65458.t1.exon1;Parent=MS.gene65458.t1
chr1.1	CDS	25846631	25846751	25846631	ID=cds.MS.gene65458.t1;Parent=MS.gene65458.t1
chr1.1	exon	25847444	25847661	25847444	ID=MS.gene65458.t1.exon2;Parent=MS.gene65458.t1
chr1.1	CDS	25847444	25847661	25847444	ID=cds.MS.gene65458.t1;Parent=MS.gene65458.t1

Gene Sequence

>MS.gene65458

ATGGCAATGGAAGAAGGCATGATTGGAAATGAGTACACAAAAGATGGAACTATTGATCTTAAAGGAAAATCTGTTCTCAGATCCAAGACAGGTGGTTGGAAAGCTTGCTCATTTCTTGTTGGTAACATTTCTCTCTCACACACTTTATGGTCATGATTTTCACTAGAAAAATGTTATTCGGACACTCATGCATCCACAGTACAATTTAATCTACCTATATATATTGTTCAATTATTCCTTAGTACAATTAACATATTTTTCTCTCAAAATTAGTACAATTAACATATTTTTCTCTCAAAAAAAAAAAAATTAACATATTTTATTCACATATCCTGTCCTAACTCAACCGAAAAAAATGCCGAAATTGTTTGGTCGGTCATATCGATATGACCGTGGATTATTTATAATCTTTACAATAAAAAATAAGAGACATTATGGTCATGATATAATATATATCAATTTTTTTAATTTGTAAGCAAAAACCTTAAGGAGTTATCTTATTGGGTAGAATAAAAGAGAAAAAGTTTACCATTTACTCTTATAGAGTGTAATTTAGAATATAAAATTAATATCTAATAAAATATAATGGTCACTTAGAGCAGTTGTGTCTCCTCTAATCTAAAATTTTATCTTTACCAACAAAGAAAATAATGGTCATTCAGTATAGAGCTCCAACTTTGCTTAAGAAGATCAAAGCATGCTCATTAGGAAATAAACCTTATATGTTGTTGATAAGTTTCTCATGCATTCAAACCATATTACCCATTTAATTGAATTGTTAATTTTGCTTGAATGAATTCATGTCTACTGCAGTGTATGGGATATTTGAAAGAATTGCTTATTTTGGAATATCATCAAATTTGTTTGTGTATTTGACAAAGAAGCTTCACCAAGGCACTGTCATCTCTTCCAACAATGTCAACAATTGGGTTGGCACTGTTTTTATGACTCCCATATTAGGTGCTTATATTGCTGATGCTCATCTTGGACGCTATTGGACTTTTGTCATTTCTGCCTTTGTTTATCTATCG

Protein sequence

>MS.gene65458.t1

MAMEEGMIGNEYTKDGTIDLKGKSVLRSKTGGWKACSFLVVYGIFERIAYFGISSNLFVYLTKKLHQGTVISSNNVNNWVGTVFMTPILGAYIADAHLGRYWTFVISAFVYLS