Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66599.t1 | XP_013455676.1 | 98.8 | 243 | 3 | 0 | 1 | 243 | 34 | 276 | 2.20E-135 | 491.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66599.t1 | P46209 | 31.6 | 225 | 129 | 7 | 28 | 242 | 22 | 231 | 1.1e-21 | 105.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66599.t1 | A0A072UJ41 | 98.8 | 243 | 3 | 0 | 1 | 243 | 34 | 276 | 1.6e-135 | 491.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene66599 | MS.gene041454 | PPI |
| MS.gene66599 | MS.gene58725 | PPI |
| MS.gene66599 | MS.gene57720 | PPI |
| MS.gene66599 | MS.gene036601 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66599.t1 | MTR_4g049830 | 98.765 | 243 | 3 | 0 | 1 | 243 | 34 | 276 | 2.22e-180 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66599.t1 | AT2G32520 | 84.298 | 242 | 35 | 2 | 1 | 242 | 39 | 277 | 3.69e-151 | 422 |
| MS.gene66599.t1 | AT2G32520 | 84.298 | 242 | 35 | 2 | 1 | 242 | 79 | 317 | 4.43e-151 | 423 |
| MS.gene66599.t1 | AT2G32520 | 84.298 | 242 | 35 | 2 | 1 | 242 | 1 | 239 | 8.19e-151 | 419 |
| MS.gene66599.t1 | AT2G32520 | 84.753 | 223 | 34 | 0 | 20 | 242 | 3 | 225 | 5.46e-143 | 399 |
Find 68 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGCTGTTGTAGCTTTCTA+TGG | 0.249743 | 4.3:+49865973 | MS.gene66599:CDS |
| TGTTATCATCTCTTTGAATC+TGG | 0.273020 | 4.3:-49861853 | None:intergenic |
| CATGCAGGCTGCCAAGGCTT+TGG | 0.317707 | 4.3:+49866716 | MS.gene66599:intron |
| TCAAGCCAAGGCTCCTGTTC+AGG | 0.338295 | 4.3:+49866026 | MS.gene66599:CDS |
| TTCAGAAGCACAGCATTTGA+TGG | 0.352825 | 4.3:+49863136 | MS.gene66599:CDS |
| GAGGAGAAGTTGAAGGCATC+TGG | 0.384697 | 4.3:+49866738 | MS.gene66599:CDS |
| ACATTTGATGCGTACGTCAT+TGG | 0.386143 | 4.3:+49862865 | MS.gene66599:CDS |
| TGCAATTGCAAGCTCTGTCT+TGG | 0.389315 | 4.3:+49865939 | MS.gene66599:CDS |
| TGGTGTAACTGGATTCTGTA+TGG | 0.391719 | 4.3:+49865906 | MS.gene66599:CDS |
| TCCTGGAGCACTACAATTCC+AGG | 0.402054 | 4.3:-49862901 | None:intergenic |
| ACATTCATGCTTCTGTTGAC+TGG | 0.402293 | 4.3:+49863189 | MS.gene66599:CDS |
| AATCCACACCCCACCACTCC+TGG | 0.411434 | 4.3:-49862918 | None:intergenic |
| TCTCCAAAGTGAGCCTGAAC+AGG | 0.427638 | 4.3:-49866039 | None:intergenic |
| GTATAGAGGAAAGGTTGGTC+TGG | 0.438275 | 4.3:+49863109 | MS.gene66599:CDS |
| ACAGGAGCCTTGGCTTGAGC+AGG | 0.438480 | 4.3:-49866021 | None:intergenic |
| GCTCCAGGAGTGGTGGGGTG+TGG | 0.440846 | 4.3:+49862915 | MS.gene66599:CDS |
| ATTTGATGGATGGTCTTGAT+TGG | 0.447280 | 4.3:+49863150 | MS.gene66599:CDS |
| GTTGACTGGCTTAAAGCAAA+TGG | 0.448142 | 4.3:+49863203 | MS.gene66599:CDS |
| GGTGTAACTGGATTCTGTAT+GGG | 0.448505 | 4.3:+49865907 | MS.gene66599:CDS |
| ACAGTCATGCATTCATGAAC+AGG | 0.454518 | 4.3:+49866793 | MS.gene66599:CDS |
| TAAAGCAAATGGTTCAAAGA+AGG | 0.456452 | 4.3:+49863214 | MS.gene66599:CDS |
| TCAGGCTCACTTTGGAGAGC+TGG | 0.461699 | 4.3:+49866044 | MS.gene66599:CDS |
| GTGTAACTGGATTCTGTATG+GGG | 0.468243 | 4.3:+49865908 | MS.gene66599:CDS |
| GCAGGCTGCCAAGGCTTTGG+AGG | 0.468360 | 4.3:+49866719 | MS.gene66599:intron |
| ATGTCTCATGCAGGCTGCCA+AGG | 0.474747 | 4.3:+49866710 | MS.gene66599:intron |
| TCCTGGAATTGTAGTGCTCC+AGG | 0.475207 | 4.3:+49862900 | MS.gene66599:CDS |
| GGTCAACTGAAGGAATCAAT+AGG | 0.478292 | 4.3:+49866814 | MS.gene66599:CDS |
| TTGTAGTGCTCCAGGAGTGG+TGG | 0.482110 | 4.3:+49862908 | MS.gene66599:CDS |
| GCTCCTGTTCAGGCTCACTT+TGG | 0.484552 | 4.3:+49866036 | MS.gene66599:CDS |
| ACTGAAGCTTCATCTTCATC+AGG | 0.490861 | 4.3:-49866855 | None:intergenic |
| TGATTGGCCTGGTGCTGTGA+AGG | 0.498803 | 4.3:+49863166 | MS.gene66599:CDS |
| CAACTTCTCCTCCAAAGCCT+TGG | 0.502223 | 4.3:-49866727 | None:intergenic |
| ATGGATGGTCTTGATTGGCC+TGG | 0.507113 | 4.3:+49863155 | MS.gene66599:CDS |
| GGCTTTGGAGGAGAAGTTGA+AGG | 0.512111 | 4.3:+49866731 | MS.gene66599:CDS |
| CTAGTAATAAATTACCTAGC+TGG | 0.513168 | 4.3:-49866925 | None:intergenic |
| GTGAGCCTGAACAGGAGCCT+TGG | 0.516240 | 4.3:-49866031 | None:intergenic |
| TGTAGTGCTCCAGGAGTGGT+GGG | 0.520604 | 4.3:+49862909 | MS.gene66599:CDS |
| ATGAATGCATGACTGTTGCC+AGG | 0.525116 | 4.3:-49866786 | None:intergenic |
| ATTGGCAAACAAGATGCTCC+TGG | 0.525265 | 4.3:+49862883 | MS.gene66599:CDS |
| CAGTTCAGCTCGCATGGTCG+CGG | 0.528504 | 4.3:+49866874 | MS.gene66599:CDS |
| TGAATGTCCTTCACAGCACC+AGG | 0.540593 | 4.3:-49863173 | None:intergenic |
| AAGCTTCAGTTCAGCTCGCA+TGG | 0.544132 | 4.3:+49866868 | MS.gene66599:CDS |
| CCGCAGTCTGTATAGAGGAA+AGG | 0.544545 | 4.3:+49863100 | MS.gene66599:intron |
| GAAGCACAGCATTTGATGGA+TGG | 0.544964 | 4.3:+49863140 | MS.gene66599:CDS |
| ATGATTTCTCAACTTGGCCG+TGG | 0.545015 | 4.3:+49862964 | MS.gene66599:CDS |
| CATGGTCGCGGTTCCAATCG+TGG | 0.545374 | 4.3:+49866886 | MS.gene66599:CDS |
| AATCAATAGGAGGAAGAACA+TGG | 0.545686 | 4.3:+49866827 | MS.gene66599:CDS |
| GGGTCTGCAAGTTCAGAAGA+AGG | 0.545874 | 4.3:-49866000 | None:intergenic |
| TGCAGACCCTGCTCAAGCCA+AGG | 0.561123 | 4.3:+49866014 | MS.gene66599:CDS |
| GGATAAGAGCTTTAAATCCA+CGG | 0.597090 | 4.3:-49862981 | None:intergenic |
| GGGTATATGTGTACCTCATG+TGG | 0.597791 | 4.3:-49866765 | None:intergenic |
| AGTACTGTGTCATCCACGAT+TGG | 0.602092 | 4.3:-49866899 | None:intergenic |
| CAGGAGCCTTGGCTTGAGCA+GGG | 0.602268 | 4.3:-49866020 | None:intergenic |
| GCTGCTATGATTTCTCAACT+TGG | 0.611149 | 4.3:+49862958 | MS.gene66599:CDS |
| TTCATGAACAGGTCAACTGA+AGG | 0.617778 | 4.3:+49866804 | MS.gene66599:CDS |
| AGTCTGTATAGAGGAAAGGT+TGG | 0.617998 | 4.3:+49863104 | MS.gene66599:intron |
| CAACTGAAGGAATCAATAGG+AGG | 0.618505 | 4.3:+49866817 | MS.gene66599:CDS |
| GTAACTGGATTCTGTATGGG+GGG | 0.624606 | 4.3:+49865910 | MS.gene66599:CDS |
| TGTAACTGGATTCTGTATGG+GGG | 0.630703 | 4.3:+49865909 | MS.gene66599:CDS |
| AGGGGCAGCAGAGTCAGCCA+TGG | 0.635296 | 4.3:-49861819 | None:intergenic |
| GAATTGTAGTGCTCCAGGAG+TGG | 0.651111 | 4.3:+49862905 | MS.gene66599:CDS |
| ATCAATAGGAGGAAGAACAT+GGG | 0.656787 | 4.3:+49866828 | MS.gene66599:CDS |
| GTAGTGCTCCAGGAGTGGTG+GGG | 0.672015 | 4.3:+49862910 | MS.gene66599:CDS |
| GACACAGTACTTGTCCAGCT+AGG | 0.679629 | 4.3:+49866911 | MS.gene66599:CDS |
| TGAATGCATGACTGTTGCCA+GGG | 0.681441 | 4.3:-49866785 | None:intergenic |
| GCTACAACAGCATCAACATG+CGG | 0.685667 | 4.3:-49865964 | None:intergenic |
| GGCATCTGGAATTCCACATG+AGG | 0.693376 | 4.3:+49866752 | MS.gene66599:CDS |
| CATGAGGTACACATATACCC+TGG | 0.700589 | 4.3:+49866768 | MS.gene66599:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CATTTTTTTTTTCATTTTAA+AGG | + | chr4.3:49861942-49861961 | MS.gene66599:intron | 10.0% |
| !!! | TATTTTTTTTTCCTTTTAAA+GGG | + | chr4.3:49863280-49863299 | MS.gene66599:intron | 10.0% |
| !!! | TTAAATTTTAAAAAAGTTGA+TGG | + | chr4.3:49862370-49862389 | MS.gene66599:intron | 10.0% |
| !!! | TTATTTTTTTTTCCTTTTAA+AGG | + | chr4.3:49863279-49863298 | MS.gene66599:intron | 10.0% |
| !!! | TTTAATATTGTTTTTGTAAT+TGG | + | chr4.3:49862110-49862129 | MS.gene66599:intron | 10.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | + | chr4.3:49865475-49865494 | MS.gene66599:intron | 15.0% |
| !! | AAAGTGAATGAAATAAATAA+TGG | - | chr4.3:49863826-49863845 | None:intergenic | 15.0% |
| !! | AAGTGAATGAAATAAATAAT+GGG | - | chr4.3:49863825-49863844 | None:intergenic | 15.0% |
| !! | ATTGCTAAATATATAATTCT+TGG | - | chr4.3:49863460-49863479 | None:intergenic | 15.0% |
| !! | CAATCTATTTATTCAATTAT+TGG | + | chr4.3:49865778-49865797 | MS.gene66599:intron | 15.0% |
| !!! | ATCTTCTAGAAATTTAATAT+TGG | - | chr4.3:49864442-49864461 | None:intergenic | 15.0% |
| !!! | TCAAATTTTGTAAAAGAAAA+TGG | + | chr4.3:49862680-49862699 | MS.gene66599:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | - | chr4.3:49865476-49865495 | None:intergenic | 15.0% |
| !!! | TTTTTATTGTTAATGTGTTA+TGG | + | chr4.3:49862050-49862069 | MS.gene66599:intron | 15.0% |
| !! | AAAGCAACTGAATTAAATTT+AGG | - | chr4.3:49866591-49866610 | None:intergenic | 20.0% |
| !! | AACAGAGATTAAATATTTCT+AGG | - | chr4.3:49863028-49863047 | None:intergenic | 20.0% |
| !! | AAGCAACTGAATTAAATTTA+GGG | - | chr4.3:49866590-49866609 | None:intergenic | 20.0% |
| !! | AGATGAAAGAATAAAAATGA+TGG | - | chr4.3:49866219-49866238 | None:intergenic | 20.0% |
| !! | AGTGAATGAAATAAATAATG+GGG | - | chr4.3:49863824-49863843 | None:intergenic | 20.0% |
| !! | CAAATCAATGAAAATATTGT+CGG | + | chr4.3:49865688-49865707 | MS.gene66599:intron | 20.0% |
| !! | CAATGTTTATAAATGTAGTT+TGG | + | chr4.3:49864549-49864568 | MS.gene66599:intron | 20.0% |
| !! | CCACATAAGTTAATAAAATA+AGG | - | chr4.3:49864342-49864361 | None:intergenic | 20.0% |
| !! | CCTCTAATTTAAACAAAATT+AGG | - | chr4.3:49865837-49865856 | None:intergenic | 20.0% |
| !! | TCAAAATACATTCTCTAATA+TGG | + | chr4.3:49863734-49863753 | MS.gene66599:intron | 20.0% |
| !! | TTAAATTAGAGGTAAATCAT+TGG | + | chr4.3:49865845-49865864 | MS.gene66599:intron | 20.0% |
| !!! | AAGATTTAACCACAAAATTT+TGG | - | chr4.3:49863935-49863954 | None:intergenic | 20.0% |
| !!! | ACTTTTCTATTATTCTTGTA+AGG | - | chr4.3:49864371-49864390 | None:intergenic | 20.0% |
| !!! | ATTATCAGTATTTTTTTCTC+CGG | + | chr4.3:49864159-49864178 | MS.gene66599:intron | 20.0% |
| !!! | ATTTTCCATTGATCTAAAAA+TGG | + | chr4.3:49866433-49866452 | MS.gene66599:intron | 20.0% |
| !!! | CCTAATTTTGTTTAAATTAG+AGG | + | chr4.3:49865834-49865853 | MS.gene66599:intron | 20.0% |
| !!! | CCTTATTTTATTAACTTATG+TGG | + | chr4.3:49864339-49864358 | MS.gene66599:intron | 20.0% |
| !!! | TAATTCCATTTTTAGATCAA+TGG | - | chr4.3:49866441-49866460 | None:intergenic | 20.0% |
| !!! | TATTAAATTTCTAGAAGATG+TGG | + | chr4.3:49864443-49864462 | MS.gene66599:intron | 20.0% |
| !!! | TTAAAACCTTATCTTTTCAA+TGG | - | chr4.3:49866477-49866496 | None:intergenic | 20.0% |
| !!! | TTCAATTATTGGTTTATGTT+TGG | + | chr4.3:49865789-49865808 | MS.gene66599:intron | 20.0% |
| !!! | TTGATTTTTGATAGTGATAT+AGG | + | chr4.3:49862176-49862195 | MS.gene66599:intron | 20.0% |
| !!! | TTTTATTCGTTGTAGATAAT+TGG | - | chr4.3:49864136-49864155 | None:intergenic | 20.0% |
| !!! | TTTTTAGATCAATGGAAAAT+AGG | - | chr4.3:49866433-49866452 | None:intergenic | 20.0% |
| !!! | TTTTTGAGTTTTTGGAAATT+GGG | + | chr4.3:49861969-49861988 | MS.gene66599:intron | 20.0% |
| !!! | TTTTTTGAGTTTTTGGAAAT+TGG | + | chr4.3:49861968-49861987 | MS.gene66599:intron | 20.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | - | chr4.3:49864732-49864751 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | + | chr4.3:49865482-49865501 | MS.gene66599:intron | 25.0% |
| ! | AATCATCAAAGAGTTTACTT+AGG | - | chr4.3:49866662-49866681 | None:intergenic | 25.0% |
| ! | AATGTTCCATTGAAAAGATA+AGG | + | chr4.3:49866468-49866487 | MS.gene66599:intron | 25.0% |
| ! | ACAATTACAAAGCATGTATT+AGG | - | chr4.3:49863416-49863435 | None:intergenic | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | + | chr4.3:49865483-49865502 | MS.gene66599:intron | 25.0% |
| ! | AGTATTTAATCGAATCTTAG+AGG | - | chr4.3:49864070-49864089 | None:intergenic | 25.0% |
| ! | GATTCGATTAAATACTTTCA+TGG | + | chr4.3:49864074-49864093 | MS.gene66599:intron | 25.0% |
| ! | GTATTTAATCGAATCTTAGA+GGG | - | chr4.3:49864069-49864088 | None:intergenic | 25.0% |
| ! | TAAATGCAGAAATGTTATCT+TGG | - | chr4.3:49866528-49866547 | None:intergenic | 25.0% |
| ! | TCAATGGAAAATAGGATTAT+AGG | - | chr4.3:49866425-49866444 | None:intergenic | 25.0% |
| ! | TCTAACTGTATTAAAGTTGT+AGG | + | chr4.3:49863550-49863569 | MS.gene66599:intron | 25.0% |
| ! | TGACTTAAGGTAATTATTGT+AGG | + | chr4.3:49864586-49864605 | MS.gene66599:intron | 25.0% |
| !! | ATGGTAATGAATAATCATCA+GGG | + | chr4.3:49862069-49862088 | MS.gene66599:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | + | chr4.3:49864749-49864768 | MS.gene66599:intron | 25.0% |
| !! | TATGGTAATGAATAATCATC+AGG | + | chr4.3:49862068-49862087 | MS.gene66599:intron | 25.0% |
| !! | TTATTGAGGTTTTGCTTATT+TGG | - | chr4.3:49866382-49866401 | None:intergenic | 25.0% |
| !!! | AAAAATGATGGATGAAAGAA+AGG | - | chr4.3:49866207-49866226 | None:intergenic | 25.0% |
| !!! | AACTTATCTTTCATTTTGAC+AGG | + | chr4.3:49865882-49865901 | MS.gene66599:intron | 25.0% |
| !!! | AAGGGAATTTTTTGAGTTTT+TGG | + | chr4.3:49861961-49861980 | MS.gene66599:intron | 25.0% |
| !!! | ACTCAGAAATTTGATTTGAA+TGG | - | chr4.3:49862285-49862304 | None:intergenic | 25.0% |
| !!! | ATTGATTTGAATAGTTCATG+AGG | - | chr4.3:49863620-49863639 | None:intergenic | 25.0% |
| !!! | CATAAAGTTTTGGTTTAGAT+CGG | + | chr4.3:49862247-49862266 | MS.gene66599:intron | 25.0% |
| !!! | CGACAATATTTTCATTGATT+TGG | - | chr4.3:49865690-49865709 | None:intergenic | 25.0% |
| !!! | GTTTTAATTTGAGAGTATGT+AGG | + | chr4.3:49863333-49863352 | MS.gene66599:intron | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | - | chr4.3:49864874-49864893 | None:intergenic | 25.0% |
| !!! | TATTTTCATTGATTTGGAGA+AGG | - | chr4.3:49865684-49865703 | None:intergenic | 25.0% |
| AGAAAGGTTAAAGCTTATTG+AGG | - | chr4.3:49866396-49866415 | None:intergenic | 30.0% | |
| AGAGAACAGAAAACAAAACA+CGG | - | chr4.3:49866634-49866653 | None:intergenic | 30.0% | |
| AGATGAATATGCATGAATGT+TGG | - | chr4.3:49866152-49866171 | None:intergenic | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | + | chr4.3:49865213-49865232 | MS.gene66599:intron | 30.0% | |
| ATATGGTATAAGTGTCTTCT+AGG | + | chr4.3:49863751-49863770 | MS.gene66599:intron | 30.0% | |
| ATATTTGGATGATGTGTGAT+TGG | + | chr4.3:49863065-49863084 | MS.gene66599:intron | 30.0% | |
| ATCAAGGCTTCAAATTCATT+AGG | - | chr4.3:49864237-49864256 | None:intergenic | 30.0% | |
| CAAATTTCTGAGTCATAAGT+AGG | + | chr4.3:49862292-49862311 | MS.gene66599:intron | 30.0% | |
| CCACTTAAACAACATCAAAT+TGG | + | chr4.3:49863849-49863868 | MS.gene66599:intron | 30.0% | |
| GAAAATGGTGTGAGAAATAT+TGG | + | chr4.3:49862695-49862714 | MS.gene66599:intron | 30.0% | |
| GGATTATAGGAATGATAGAA+AGG | - | chr4.3:49866412-49866431 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | + | chr4.3:49864692-49864711 | MS.gene66599:intron | 30.0% | |
| TAAAGCAAATGGTTCAAAGA+AGG | + | chr4.3:49863214-49863233 | MS.gene66599:CDS | 30.0% | |
| TACTAATGTGAAGATGAACT+AGG | + | chr4.3:49864413-49864432 | MS.gene66599:intron | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | - | chr4.3:49865305-49865324 | None:intergenic | 30.0% | |
| TAGTTCATCTTCACATTAGT+AGG | - | chr4.3:49864414-49864433 | None:intergenic | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | + | chr4.3:49865526-49865545 | MS.gene66599:intron | 30.0% | |
| TCTATATAAACACACCATTG+CGG | - | chr4.3:49862514-49862533 | None:intergenic | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | - | chr4.3:49864685-49864704 | None:intergenic | 30.0% | |
| TGCTTATTTGGTAAAACTCT+AGG | - | chr4.3:49866370-49866389 | None:intergenic | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | - | chr4.3:49865285-49865304 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | - | chr4.3:49864688-49864707 | None:intergenic | 30.0% | |
| TGTTATCATCTCTTTGAATC+TGG | - | chr4.3:49861856-49861875 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | - | chr4.3:49865210-49865229 | None:intergenic | 30.0% | |
| TTGCTCAATTACCCTTTAAA+AGG | - | chr4.3:49863294-49863313 | None:intergenic | 30.0% | |
| TTTCATATCTTGTGCTCTTA+GGG | + | chr4.3:49866549-49866568 | MS.gene66599:intron | 30.0% | |
| ! | ACCATAACTCCAAAATTTTG+TGG | + | chr4.3:49863923-49863942 | MS.gene66599:intron | 30.0% |
| ! | CCAATTTGATGTTGTTTAAG+TGG | - | chr4.3:49863852-49863871 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | + | chr4.3:49864727-49864746 | MS.gene66599:intron | 30.0% |
| ! | GTGAATTTGAGTTTGAACTT+AGG | + | chr4.3:49862139-49862158 | MS.gene66599:intron | 30.0% |
| ! | TACATTGCAGCATAAAGTTT+TGG | + | chr4.3:49862237-49862256 | MS.gene66599:intron | 30.0% |
| ! | TCTACATTTTCCATGGAAAT+AGG | - | chr4.3:49863884-49863903 | None:intergenic | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | + | chr4.3:49864878-49864897 | MS.gene66599:intron | 30.0% |
| !! | AGCAAGAGTTTATTGACTTA+AGG | + | chr4.3:49864573-49864592 | MS.gene66599:intron | 30.0% |
| !!! | ACCACAAAATTTTGGAGTTA+TGG | - | chr4.3:49863927-49863946 | None:intergenic | 30.0% |
| !!! | ATTGGGTTTTGACTTTGATT+TGG | + | chr4.3:49861986-49862005 | MS.gene66599:intron | 30.0% |
| !!! | TGTATTTTGATGAGAATGTG+CGG | - | chr4.3:49863724-49863743 | None:intergenic | 30.0% |
| !!! | TTGGGTTTTGACTTTGATTT+GGG | + | chr4.3:49861987-49862006 | MS.gene66599:intron | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | - | chr4.3:49865464-49865483 | None:intergenic | 30.0% |
| AAAACTCTAGGCATTCAAGA+TGG | - | chr4.3:49866358-49866377 | None:intergenic | 35.0% | |
| AAACTCTAGGCATTCAAGAT+GGG | - | chr4.3:49866357-49866376 | None:intergenic | 35.0% | |
| AACAATAGGACTACACCAAA+GGG | - | chr4.3:49865513-49865532 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | - | chr4.3:49865277-49865296 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | + | chr4.3:49865076-49865095 | MS.gene66599:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | - | chr4.3:49864804-49864823 | None:intergenic | 35.0% | |
| AAGTCTGAACAATGTGATCA+AGG | - | chr4.3:49864253-49864272 | None:intergenic | 35.0% | |
| AATCAATAGGAGGAAGAACA+TGG | + | chr4.3:49866827-49866846 | MS.gene66599:CDS | 35.0% | |
| ACATGAGCTGTCTCTTAAAA+GGG | + | chr4.3:49866298-49866317 | MS.gene66599:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | - | chr4.3:49865276-49865295 | None:intergenic | 35.0% | |
| AGAAAACAAAACACGGTTAG+AGG | - | chr4.3:49866627-49866646 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | - | chr4.3:49864937-49864956 | None:intergenic | 35.0% | |
| AGAGAAGTCACACAAACAAT+AGG | - | chr4.3:49864043-49864062 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | - | chr4.3:49864720-49864739 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | - | chr4.3:49864885-49864904 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | - | chr4.3:49865072-49865091 | None:intergenic | 35.0% | |
| AGGCTTCAAATTCATTAGGT+AGG | - | chr4.3:49864233-49864252 | None:intergenic | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | - | chr4.3:49865225-49865244 | None:intergenic | 35.0% | |
| ATCAATAGGAGGAAGAACAT+GGG | + | chr4.3:49866828-49866847 | MS.gene66599:CDS | 35.0% | |
| ATCACAATCATTGTTGTCGA+TGG | - | chr4.3:49862563-49862582 | None:intergenic | 35.0% | |
| ATTTGCATGCAGCTTAAATG+TGG | + | chr4.3:49862210-49862229 | MS.gene66599:intron | 35.0% | |
| CAGAAACTTGTGAAGTAATC+AGG | + | chr4.3:49862763-49862782 | MS.gene66599:intron | 35.0% | |
| CATTAATCTATGAGGACTTG+AGG | - | chr4.3:49865752-49865771 | None:intergenic | 35.0% | |
| CTTATCCCAGAGTAAGAAAA+TGG | + | chr4.3:49862997-49863016 | MS.gene66599:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | - | chr4.3:49864860-49864879 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | + | chr4.3:49865212-49865231 | MS.gene66599:intron | 35.0% | |
| GCAGTGACATATGCTATATT+TGG | + | chr4.3:49863050-49863069 | MS.gene66599:intron | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | - | chr4.3:49864807-49864826 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | - | chr4.3:49865211-49865230 | None:intergenic | 35.0% | |
| GTTGAGAAAACCTATTTCCA+TGG | + | chr4.3:49863871-49863890 | MS.gene66599:intron | 35.0% | |
| GTTTCATATCTTGTGCTCTT+AGG | + | chr4.3:49866548-49866567 | MS.gene66599:intron | 35.0% | |
| TAACAATAGGACTACACCAA+AGG | - | chr4.3:49865514-49865533 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | - | chr4.3:49865150-49865169 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | + | chr4.3:49865214-49865233 | MS.gene66599:intron | 35.0% | |
| TCCATGGAAAATGTAGAATG+AGG | + | chr4.3:49863887-49863906 | MS.gene66599:intron | 35.0% | |
| TCGTTGTAGATAATTGGACA+TGG | - | chr4.3:49864130-49864149 | None:intergenic | 35.0% | |
| TGAGTGCACATTAATCTATG+AGG | - | chr4.3:49865760-49865779 | None:intergenic | 35.0% | |
| TGATTGTGATAGAGAGTAGA+TGG | + | chr4.3:49862573-49862592 | MS.gene66599:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | - | chr4.3:49864865-49864884 | None:intergenic | 35.0% | |
| TGGTGTAGTCCTATTGTTAT+GGG | + | chr4.3:49865515-49865534 | MS.gene66599:intron | 35.0% | |
| TTCAGAGAAAGGATTGTAGA+AGG | - | chr4.3:49863794-49863813 | None:intergenic | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | + | chr4.3:49864808-49864827 | MS.gene66599:intron | 35.0% | |
| TTGGTGTAGTCCTATTGTTA+TGG | + | chr4.3:49865514-49865533 | MS.gene66599:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | - | chr4.3:49865085-49865104 | None:intergenic | 35.0% |
| ! | AAGTACCTAGAGAGATTTTG+TGG | - | chr4.3:49865652-49865671 | None:intergenic | 35.0% |
| ! | AATCTGGATTTTGCTGAAAG+GGG | - | chr4.3:49861840-49861859 | None:intergenic | 35.0% |
| ! | AGTAGATGGAAGACTAGTTA+GGG | + | chr4.3:49862587-49862606 | MS.gene66599:intron | 35.0% |
| ! | ATTTGATGGATGGTCTTGAT+TGG | + | chr4.3:49863150-49863169 | MS.gene66599:CDS | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | - | chr4.3:49864708-49864727 | None:intergenic | 35.0% |
| ! | GAATCTGGATTTTGCTGAAA+GGG | - | chr4.3:49861841-49861860 | None:intergenic | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | - | chr4.3:49865527-49865546 | None:intergenic | 35.0% |
| ! | TAGCACCATTTTCTTACTCT+GGG | - | chr4.3:49863005-49863024 | None:intergenic | 35.0% |
| ! | TATGTTTTGCTTGGTAAGGA+GGG | - | chr4.3:49866254-49866273 | None:intergenic | 35.0% |
| ! | TCCTCATTCTACATTTTCCA+TGG | - | chr4.3:49863891-49863910 | None:intergenic | 35.0% |
| ! | TCTCTGATAATGAAGCTAGT+AGG | + | chr4.3:49864285-49864304 | MS.gene66599:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | + | chr4.3:49865418-49865437 | MS.gene66599:intron | 35.0% |
| ! | TGAATCTGGATTTTGCTGAA+AGG | - | chr4.3:49861842-49861861 | None:intergenic | 35.0% |
| ! | TGTAAATGTATTGCTGTTGC+TGG | - | chr4.3:49864528-49864547 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | + | chr4.3:49865595-49865614 | MS.gene66599:intron | 35.0% |
| !! | GGATAAGAGCTTTAAATCCA+CGG | - | chr4.3:49862984-49863003 | None:intergenic | 35.0% |
| !! | TATCTTTCATTTTGACAGGC+TGG | + | chr4.3:49865886-49865905 | MS.gene66599:intron | 35.0% |
| !! | TGATAAGTGTTGAGAAATGC+CGG | + | chr4.3:49862416-49862435 | MS.gene66599:intron | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | + | chr4.3:49865183-49865202 | MS.gene66599:intron | 35.0% |
| !! | TTTTAAGAGACAGCTCATGT+CGG | - | chr4.3:49866298-49866317 | None:intergenic | 35.0% |
| !!! | ATCAGTATTTTTTTCTCCGG+TGG | + | chr4.3:49864162-49864181 | MS.gene66599:intron | 35.0% |
| !!! | GTATTTTGATGAGAATGTGC+GGG | - | chr4.3:49863723-49863742 | None:intergenic | 35.0% |
| !!! | GTTTTGACTTTGATTTGGGA+TGG | + | chr4.3:49861991-49862010 | MS.gene66599:intron | 35.0% |
| !!! | TGTTGGCTTTTCAGATGTTA+CGG | + | chr4.3:49866074-49866093 | MS.gene66599:CDS | 35.0% |
| AAAGGGAACGTTCACACATT+CGG | + | chr4.3:49866315-49866334 | MS.gene66599:intron | 40.0% | |
| AACTCTAGGCATTCAAGATG+GGG | - | chr4.3:49866356-49866375 | None:intergenic | 40.0% | |
| AATATTGTCGGTAGAGAGCA+TGG | + | chr4.3:49865700-49865719 | MS.gene66599:intron | 40.0% | |
| ACAATCATTGTTGTCGATGG+CGG | - | chr4.3:49862560-49862579 | None:intergenic | 40.0% | |
| ACAGTCATGCATTCATGAAC+AGG | + | chr4.3:49866793-49866812 | MS.gene66599:CDS | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | - | chr4.3:49864910-49864929 | None:intergenic | 40.0% | |
| ACATTCATGCTTCTGTTGAC+TGG | + | chr4.3:49863189-49863208 | MS.gene66599:CDS | 40.0% | |
| ACATTTGATGCGTACGTCAT+TGG | + | chr4.3:49862865-49862884 | MS.gene66599:CDS | 40.0% | |
| ACTGAAGCTTCATCTTCATC+AGG | - | chr4.3:49866858-49866877 | None:intergenic | 40.0% | |
| ACTTGTGAAGTAATCAGGCA+TGG | + | chr4.3:49862768-49862787 | MS.gene66599:intron | 40.0% | |
| AGATGATTGCAAAAGGAGAC+TGG | - | chr4.3:49864192-49864211 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | - | chr4.3:49865588-49865607 | None:intergenic | 40.0% | |
| AGCTTCGAGATGATTGCAAA+AGG | - | chr4.3:49864199-49864218 | None:intergenic | 40.0% | |
| AGGATTGTAGAAGGTTGTCA+AGG | - | chr4.3:49863785-49863804 | None:intergenic | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | - | chr4.3:49864779-49864798 | None:intergenic | 40.0% | |
| AGTCTGTATAGAGGAAAGGT+TGG | + | chr4.3:49863104-49863123 | MS.gene66599:intron | 40.0% | |
| ATCGCAATCCTCTTCAGAAA+AGG | - | chr4.3:49863974-49863993 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | + | chr4.3:49865246-49865265 | MS.gene66599:intron | 40.0% | |
| CAACTGAAGGAATCAATAGG+AGG | + | chr4.3:49866817-49866836 | MS.gene66599:CDS | 40.0% | |
| CATCTCGAAGCTATACTCAA+TGG | + | chr4.3:49864207-49864226 | MS.gene66599:intron | 40.0% | |
| CCTCTTCAGAAAAGGAAATG+TGG | - | chr4.3:49863966-49863985 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | - | chr4.3:49865586-49865605 | None:intergenic | 40.0% | |
| CTCTGCTTCTTTCATCATCA+TGG | + | chr4.3:49861884-49861903 | MS.gene66599:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | - | chr4.3:49864911-49864930 | None:intergenic | 40.0% | |
| GACATGAGCTGTCTCTTAAA+AGG | + | chr4.3:49866297-49866316 | MS.gene66599:intron | 40.0% | |
| GATGCTGTTGTAGCTTTCTA+TGG | + | chr4.3:49865973-49865992 | MS.gene66599:CDS | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | - | chr4.3:49865587-49865606 | None:intergenic | 40.0% | |
| GCTGCTATGATTTCTCAACT+TGG | + | chr4.3:49862958-49862977 | MS.gene66599:CDS | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | + | chr4.3:49865644-49865663 | MS.gene66599:intron | 40.0% | |
| GGGAAACTGGAATTGTCTTA+GGG | - | chr4.3:49866277-49866296 | None:intergenic | 40.0% | |
| GGGGATCAATATTCAGAGAA+AGG | - | chr4.3:49863805-49863824 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | - | chr4.3:49865190-49865209 | None:intergenic | 40.0% | |
| GGTCAACTGAAGGAATCAAT+AGG | + | chr4.3:49866814-49866833 | MS.gene66599:CDS | 40.0% | |
| GGTGTAACTGGATTCTGTAT+GGG | + | chr4.3:49865907-49865926 | MS.gene66599:CDS | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | - | chr4.3:49865151-49865170 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | - | chr4.3:49864943-49864962 | None:intergenic | 40.0% | |
| GTGTAACTGGATTCTGTATG+GGG | + | chr4.3:49865908-49865927 | MS.gene66599:CDS | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | - | chr4.3:49865585-49865604 | None:intergenic | 40.0% | |
| TCATCCTTCGAAAATTGGCT+AGG | - | chr4.3:49862471-49862490 | None:intergenic | 40.0% | |
| TCCATTGCAGGTAGAAAACA+TGG | - | chr4.3:49862797-49862816 | None:intergenic | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | - | chr4.3:49865253-49865272 | None:intergenic | 40.0% | |
| TCTATACAGACTGCGGAAAA+TGG | - | chr4.3:49863096-49863115 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | - | chr4.3:49864912-49864931 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | - | chr4.3:49865600-49865619 | None:intergenic | 40.0% | |
| TGGTGTAACTGGATTCTGTA+TGG | + | chr4.3:49865906-49865925 | MS.gene66599:CDS | 40.0% | |
| TGTAACTGGATTCTGTATGG+GGG | + | chr4.3:49865909-49865928 | MS.gene66599:CDS | 40.0% | |
| TTCATGAACAGGTCAACTGA+AGG | + | chr4.3:49866804-49866823 | MS.gene66599:CDS | 40.0% | |
| TTTAAGAGACAGCTCATGTC+GGG | - | chr4.3:49866297-49866316 | None:intergenic | 40.0% | |
| ! | AGGGTATGTTTTGCTTGGTA+AGG | - | chr4.3:49866258-49866277 | None:intergenic | 40.0% |
| ! | ATATTGTCGGTAGAGAGCAT+GGG | + | chr4.3:49865701-49865720 | MS.gene66599:intron | 40.0% |
| ! | ATTTTCCGCAGTCTGTATAG+AGG | + | chr4.3:49863095-49863114 | MS.gene66599:intron | 40.0% |
| ! | CATATTTCGAGTGACAACAC+AGG | + | chr4.3:49864013-49864032 | MS.gene66599:intron | 40.0% |
| ! | CATTGATTGATGTCTCATGC+AGG | + | chr4.3:49866701-49866720 | MS.gene66599:intron | 40.0% |
| ! | GAGTAGATGGAAGACTAGTT+AGG | + | chr4.3:49862586-49862605 | MS.gene66599:intron | 40.0% |
| ! | GTAGCACCATTTTCTTACTC+TGG | - | chr4.3:49863006-49863025 | None:intergenic | 40.0% |
| ! | GTATGTTTTGCTTGGTAAGG+AGG | - | chr4.3:49866255-49866274 | None:intergenic | 40.0% |
| ! | GTCTTAGGGTATGTTTTGCT+TGG | - | chr4.3:49866263-49866282 | None:intergenic | 40.0% |
| ! | TCCATGTTTTCTACCTGCAA+TGG | + | chr4.3:49862793-49862812 | MS.gene66599:intron | 40.0% |
| ! | TTCAGAAGCACAGCATTTGA+TGG | + | chr4.3:49863136-49863155 | MS.gene66599:CDS | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | + | chr4.3:49865308-49865327 | MS.gene66599:intron | 40.0% |
| !! | CCACATTTCCTTTTCTGAAG+AGG | + | chr4.3:49863963-49863982 | MS.gene66599:intron | 40.0% |
| !! | GTTGACTGGCTTAAAGCAAA+TGG | + | chr4.3:49863203-49863222 | MS.gene66599:CDS | 40.0% |
| AAAATCTACCACGCCATGAC+CGG | - | chr4.3:49862438-49862457 | None:intergenic | 45.0% | |
| AAGGGAACGTTCACACATTC+GGG | + | chr4.3:49866316-49866335 | MS.gene66599:intron | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | - | chr4.3:49865038-49865057 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | - | chr4.3:49864795-49864814 | None:intergenic | 45.0% | |
| AGTACTGTGTCATCCACGAT+TGG | - | chr4.3:49866902-49866921 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | - | chr4.3:49865147-49865166 | None:intergenic | 45.0% | |
| ATGAATGCATGACTGTTGCC+AGG | - | chr4.3:49866789-49866808 | None:intergenic | 45.0% | |
| ATGATTTCTCAACTTGGCCG+TGG | + | chr4.3:49862964-49862983 | MS.gene66599:CDS | 45.0% | |
| ATTGGCAAACAAGATGCTCC+TGG | + | chr4.3:49862883-49862902 | MS.gene66599:CDS | 45.0% | |
| CAGCAATGAAGTTCCATTGC+AGG | - | chr4.3:49862809-49862828 | None:intergenic | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | - | chr4.3:49864909-49864928 | None:intergenic | 45.0% | |
| CATGAGGTACACATATACCC+TGG | + | chr4.3:49866768-49866787 | MS.gene66599:CDS | 45.0% | |
| CCTTTCCTCTATACAGACTG+CGG | - | chr4.3:49863103-49863122 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | - | chr4.3:49864990-49865009 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | + | chr4.3:49864993-49865012 | MS.gene66599:intron | 45.0% | |
| CGGGAAACTGGAATTGTCTT+AGG | - | chr4.3:49866278-49866297 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | + | chr4.3:49865105-49865124 | MS.gene66599:intron | 45.0% | |
| GAAGCACAGCATTTGATGGA+TGG | + | chr4.3:49863140-49863159 | MS.gene66599:CDS | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | - | chr4.3:49864785-49864804 | None:intergenic | 45.0% | |
| GCTACAACAGCATCAACATG+CGG | - | chr4.3:49865967-49865986 | None:intergenic | 45.0% | |
| GGGTATATGTGTACCTCATG+TGG | - | chr4.3:49866768-49866787 | None:intergenic | 45.0% | |
| GGTGGTCATCCTTCGAAAAT+TGG | - | chr4.3:49862476-49862495 | None:intergenic | 45.0% | |
| GTAACTGGATTCTGTATGGG+GGG | + | chr4.3:49865910-49865929 | MS.gene66599:CDS | 45.0% | |
| TAAACACACCATTGCGGCTA+TGG | - | chr4.3:49862508-49862527 | None:intergenic | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | + | chr4.3:49865034-49865053 | MS.gene66599:intron | 45.0% | |
| TCCTTCGAAAATTGGCTAGG+TGG | - | chr4.3:49862468-49862487 | None:intergenic | 45.0% | |
| TGAATGCATGACTGTTGCCA+GGG | - | chr4.3:49866788-49866807 | None:intergenic | 45.0% | |
| TGCAATTGCAAGCTCTGTCT+TGG | + | chr4.3:49865939-49865958 | MS.gene66599:CDS | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | - | chr4.3:49865030-49865049 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | - | chr4.3:49865138-49865157 | None:intergenic | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | - | chr4.3:49865124-49865143 | None:intergenic | 45.0% | |
| ! | ACCACCTAGCCAATTTTCGA+AGG | + | chr4.3:49862464-49862483 | MS.gene66599:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | - | chr4.3:49865642-49865661 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | - | chr4.3:49865403-49865422 | None:intergenic | 45.0% |
| ! | GGAGAGCTGGACAATTTTGT+TGG | + | chr4.3:49866057-49866076 | MS.gene66599:CDS | 45.0% |
| ! | GTATAGAGGAAAGGTTGGTC+TGG | + | chr4.3:49863109-49863128 | MS.gene66599:CDS | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | - | chr4.3:49865029-49865048 | None:intergenic | 45.0% |
| ! | TTTTCGAAGGATGACCACCA+TGG | + | chr4.3:49862477-49862496 | MS.gene66599:intron | 45.0% |
| ! | TTTTGACAGGCTGGTGTAAC+TGG | + | chr4.3:49865895-49865914 | MS.gene66599:intron | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | + | chr4.3:49865431-49865450 | MS.gene66599:intron | 45.0% |
| !! | TTGTTGTCGATGGCGGAATA+TGG | - | chr4.3:49862553-49862572 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTTTCATTTTAAA+GGG | + | chr4.3:49861943-49861962 | MS.gene66599:intron | 5.0% |
| AAAGGAGACTGGATCTCCAC+CGG | - | chr4.3:49864181-49864200 | None:intergenic | 50.0% | |
| AACGTTCACACATTCGGGGA+GGG | + | chr4.3:49866321-49866340 | MS.gene66599:intron | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | + | chr4.3:49865579-49865598 | MS.gene66599:intron | 50.0% | |
| AAGCTTCAGTTCAGCTCGCA+TGG | + | chr4.3:49866868-49866887 | MS.gene66599:CDS | 50.0% | |
| ACCGCCTTATCCCACTAAGT+GGG | + | chr4.3:49864638-49864657 | MS.gene66599:intron | 50.0% | |
| ACTAGTGTTAGGACGCAGGA+TGG | - | chr4.3:49865557-49865576 | None:intergenic | 50.0% | |
| AGGACTTAGGGTTGACCCTT+TGG | + | chr4.3:49865495-49865514 | MS.gene66599:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | - | chr4.3:49864962-49864981 | None:intergenic | 50.0% | |
| AGGGAACGTTCACACATTCG+GGG | + | chr4.3:49866317-49866336 | MS.gene66599:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | - | chr4.3:49865378-49865397 | None:intergenic | 50.0% | |
| CAACTTCTCCTCCAAAGCCT+TGG | - | chr4.3:49866730-49866749 | None:intergenic | 50.0% | |
| CCGCAGTCTGTATAGAGGAA+AGG | + | chr4.3:49863100-49863119 | MS.gene66599:intron | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | - | chr4.3:49865314-49865333 | None:intergenic | 50.0% | |
| CTAGTGTTAGGACGCAGGAT+GGG | - | chr4.3:49865556-49865575 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr4.3:49864643-49864662 | MS.gene66599:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | - | chr4.3:49865630-49865649 | None:intergenic | 50.0% | |
| GAATTGTAGTGCTCCAGGAG+TGG | + | chr4.3:49862905-49862924 | MS.gene66599:CDS | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | - | chr4.3:49865263-49865282 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | - | chr4.3:49865379-49865398 | None:intergenic | 50.0% | |
| GATGCACAAAGCCTCTCCAA+GGG | + | chr4.3:49864096-49864115 | MS.gene66599:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | - | chr4.3:49865631-49865650 | None:intergenic | 50.0% | |
| GGACATGGTCAGTAAACCCT+TGG | - | chr4.3:49864115-49864134 | None:intergenic | 50.0% | |
| GGGTCTGCAAGTTCAGAAGA+AGG | - | chr4.3:49866003-49866022 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | - | chr4.3:49865043-49865062 | None:intergenic | 50.0% | |
| GTGTTGAGAAATGCCGGTCA+TGG | + | chr4.3:49862422-49862441 | MS.gene66599:intron | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | - | chr4.3:49865363-49865382 | None:intergenic | 50.0% | |
| TAGTGTTAGGACGCAGGATG+GGG | - | chr4.3:49865555-49865574 | None:intergenic | 50.0% | |
| TCCTGGAATTGTAGTGCTCC+AGG | + | chr4.3:49862900-49862919 | MS.gene66599:CDS | 50.0% | |
| TCTCCAAAGTGAGCCTGAAC+AGG | - | chr4.3:49866042-49866061 | None:intergenic | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | + | chr4.3:49864817-49864836 | MS.gene66599:intron | 50.0% | |
| TGAATGTCCTTCACAGCACC+AGG | - | chr4.3:49863176-49863195 | None:intergenic | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | - | chr4.3:49865632-49865651 | None:intergenic | 50.0% | |
| TGGTCAGTAAACCCTTGGAG+AGG | - | chr4.3:49864110-49864129 | None:intergenic | 50.0% | |
| TTCGACTAGTGTTAGGACGC+AGG | - | chr4.3:49865561-49865580 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | - | chr4.3:49864982-49865001 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | - | chr4.3:49865340-49865359 | None:intergenic | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | - | chr4.3:49865392-49865411 | None:intergenic | 50.0% |
| ! | ATGGATGGTCTTGATTGGCC+TGG | + | chr4.3:49863155-49863174 | MS.gene66599:CDS | 50.0% |
| ! | GGCATCTGGAATTCCACATG+AGG | + | chr4.3:49866752-49866771 | MS.gene66599:CDS | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | - | chr4.3:49865393-49865412 | None:intergenic | 50.0% |
| ! | TCCTGGAGCACTACAATTCC+AGG | - | chr4.3:49862904-49862923 | None:intergenic | 50.0% |
| ! | TGCGTTCTAGATCGTTCTCG+TGG | + | chr4.3:49863481-49863500 | MS.gene66599:intron | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | + | chr4.3:49865311-49865330 | MS.gene66599:intron | 50.0% |
| !! | GAGGAGAAGTTGAAGGCATC+TGG | + | chr4.3:49866738-49866757 | MS.gene66599:CDS | 50.0% |
| !! | GGCTTTGGAGGAGAAGTTGA+AGG | + | chr4.3:49866731-49866750 | MS.gene66599:CDS | 50.0% |
| !! | TCGATGGCGGAATATGGCAA+AGG | - | chr4.3:49862547-49862566 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+TGG | + | chr4.3:49864651-49864670 | MS.gene66599:intron | 55.0% | |
| AGGGGGCTTCGACTAGTGTT+AGG | - | chr4.3:49865568-49865587 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | - | chr4.3:49864652-49864671 | None:intergenic | 55.0% | |
| ATGTCTCATGCAGGCTGCCA+AGG | + | chr4.3:49866710-49866729 | MS.gene66599:intron | 55.0% | |
| CACCGCCTTATCCCACTAAG+TGG | + | chr4.3:49864637-49864656 | MS.gene66599:intron | 55.0% | |
| CCCCACTTAGTGGGATAAGG+CGG | - | chr4.3:49864642-49864661 | None:intergenic | 55.0% | |
| CCGCCTTATCCCACTAAGTG+GGG | + | chr4.3:49864639-49864658 | MS.gene66599:intron | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | + | chr4.3:49865622-49865641 | MS.gene66599:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr4.3:49864645-49864664 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | - | chr4.3:49864970-49864989 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | - | chr4.3:49865056-49865075 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | + | chr4.3:49864818-49864837 | MS.gene66599:intron | 55.0% | |
| GAACGTTCACACATTCGGGG+AGG | + | chr4.3:49866320-49866339 | MS.gene66599:intron | 55.0% | |
| GACAGCTCATGTCGGGAAAC+TGG | - | chr4.3:49866290-49866309 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | + | chr4.3:49865330-49865349 | MS.gene66599:intron | 55.0% | |
| GCTCCTGTTCAGGCTCACTT+TGG | + | chr4.3:49866036-49866055 | MS.gene66599:CDS | 55.0% | |
| GGATGCACAAAGCCTCTCCA+AGG | + | chr4.3:49864095-49864114 | MS.gene66599:intron | 55.0% | |
| TCAAGCCAAGGCTCCTGTTC+AGG | + | chr4.3:49866026-49866045 | MS.gene66599:CDS | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | + | chr4.3:49865621-49865640 | MS.gene66599:intron | 55.0% | |
| TCGAAGGATGACCACCATGG+TGG | + | chr4.3:49862480-49862499 | MS.gene66599:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | - | chr4.3:49864651-49864670 | None:intergenic | 55.0% | |
| TGTAGTGCTCCAGGAGTGGT+GGG | + | chr4.3:49862909-49862928 | MS.gene66599:CDS | 55.0% | |
| TTGTAGTGCTCCAGGAGTGG+TGG | + | chr4.3:49862908-49862927 | MS.gene66599:CDS | 55.0% | |
| ! | TCAGGCTCACTTTGGAGAGC+TGG | + | chr4.3:49866044-49866063 | MS.gene66599:CDS | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | - | chr4.3:49865026-49865045 | None:intergenic | 55.0% |
| !! | TGATTGGCCTGGTGCTGTGA+AGG | + | chr4.3:49863166-49863185 | MS.gene66599:CDS | 55.0% |
| AATCCACACCCCACCACTCC+TGG | - | chr4.3:49862921-49862940 | None:intergenic | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | - | chr4.3:49865360-49865379 | None:intergenic | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | - | chr4.3:49865548-49865567 | None:intergenic | 60.0% | |
| CAGTTCAGCTCGCATGGTCG+CGG | + | chr4.3:49866874-49866893 | MS.gene66599:CDS | 60.0% | |
| CATGCAGGCTGCCAAGGCTT+TGG | + | chr4.3:49866716-49866735 | MS.gene66599:intron | 60.0% | |
| CATGGTCGCGGTTCCAATCG+TGG | + | chr4.3:49866886-49866905 | MS.gene66599:CDS | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | - | chr4.3:49865625-49865644 | None:intergenic | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | - | chr4.3:49865375-49865394 | None:intergenic | 60.0% | |
| GAGAAATGCCGGTCATGGCG+TGG | + | chr4.3:49862427-49862446 | MS.gene66599:intron | 60.0% | |
| GTAGTGCTCCAGGAGTGGTG+GGG | + | chr4.3:49862910-49862929 | MS.gene66599:CDS | 60.0% | |
| GTGAGCCTGAACAGGAGCCT+TGG | - | chr4.3:49866034-49866053 | None:intergenic | 60.0% | |
| TGCAGACCCTGCTCAAGCCA+AGG | + | chr4.3:49866014-49866033 | MS.gene66599:CDS | 60.0% | |
| ! | ACAGGAGCCTTGGCTTGAGC+AGG | - | chr4.3:49866024-49866043 | None:intergenic | 60.0% |
| ! | CAGGAGCCTTGGCTTGAGCA+GGG | - | chr4.3:49866023-49866042 | None:intergenic | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | - | chr4.3:49865389-49865408 | None:intergenic | 60.0% |
| GAGAAGACCCGTAGACGCCG+TGG | - | chr4.3:49864828-49864847 | None:intergenic | 65.0% | |
| TTGCGGCTATGGCGCCACCA+TGG | - | chr4.3:49862497-49862516 | None:intergenic | 65.0% | |
| ! | GCAGGCTGCCAAGGCTTTGG+AGG | + | chr4.3:49866719-49866738 | MS.gene66599:intron | 65.0% |
| ! | TGGTGGCGCCATAGCCGCAA+TGG | + | chr4.3:49862497-49862516 | MS.gene66599:intron | 65.0% |
| CGGCTATGGCGCCACCATGG+TGG | - | chr4.3:49862494-49862513 | None:intergenic | 70.0% | |
| ! | GCTCCAGGAGTGGTGGGGTG+TGG | + | chr4.3:49862915-49862934 | MS.gene66599:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 49861821 | 49866932 | 49861821 | ID=MS.gene66599 |
| chr4.3 | mRNA | 49861821 | 49866932 | 49861821 | ID=MS.gene66599.t1;Parent=MS.gene66599 |
| chr4.3 | exon | 49861821 | 49861877 | 49861821 | ID=MS.gene66599.t1.exon1;Parent=MS.gene66599.t1 |
| chr4.3 | CDS | 49861821 | 49861877 | 49861821 | ID=cds.MS.gene66599.t1;Parent=MS.gene66599.t1 |
| chr4.3 | exon | 49862865 | 49863007 | 49862865 | ID=MS.gene66599.t1.exon2;Parent=MS.gene66599.t1 |
| chr4.3 | CDS | 49862865 | 49863007 | 49862865 | ID=cds.MS.gene66599.t1;Parent=MS.gene66599.t1 |
| chr4.3 | exon | 49863106 | 49863235 | 49863106 | ID=MS.gene66599.t1.exon3;Parent=MS.gene66599.t1 |
| chr4.3 | CDS | 49863106 | 49863235 | 49863106 | ID=cds.MS.gene66599.t1;Parent=MS.gene66599.t1 |
| chr4.3 | exon | 49865904 | 49866095 | 49865904 | ID=MS.gene66599.t1.exon4;Parent=MS.gene66599.t1 |
| chr4.3 | CDS | 49865904 | 49866095 | 49865904 | ID=cds.MS.gene66599.t1;Parent=MS.gene66599.t1 |
| chr4.3 | exon | 49866723 | 49866932 | 49866723 | ID=MS.gene66599.t1.exon5;Parent=MS.gene66599.t1 |
| chr4.3 | CDS | 49866723 | 49866932 | 49866723 | ID=cds.MS.gene66599.t1;Parent=MS.gene66599.t1 |
| Gene Sequence |
| Protein sequence |
