Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66993.t1 | RHN50781.1 | 93 | 631 | 44 | 0 | 1 | 631 | 1 | 631 | 0.00E+00 | 1211.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66993.t1 | A7LXU3 | 32.5 | 652 | 363 | 17 | 35 | 629 | 35 | 666 | 1.9e-86 | 321.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66993.t1 | A0A396HE11 | 93.0 | 631 | 44 | 0 | 1 | 631 | 1 | 631 | 0.0e+00 | 1211.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051973 | MS.gene66993 | 0.800834 | 1.20E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene66993 | 0.82278 | 1.97E-53 | -1.69E-46 |
| MS.gene056988 | MS.gene66993 | 0.806491 | 8.02E-50 | -1.69E-46 |
| MS.gene058603 | MS.gene66993 | 0.825451 | 4.65E-54 | -1.69E-46 |
| MS.gene059223 | MS.gene66993 | 0.82462 | 7.31E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66993.t1 | MTR_6g028100 | 92.868 | 631 | 45 | 0 | 1 | 631 | 1 | 631 | 0.0 | 1225 |
| MS.gene66993.t1 | MTR_6g028110 | 92.247 | 632 | 48 | 1 | 1 | 631 | 1 | 632 | 0.0 | 1216 |
| MS.gene66993.t1 | MTR_6g028110 | 92.247 | 632 | 48 | 1 | 1 | 631 | 1 | 632 | 0.0 | 1212 |
| MS.gene66993.t1 | MTR_6g028090 | 91.158 | 622 | 55 | 0 | 1 | 622 | 1 | 622 | 0.0 | 1193 |
| MS.gene66993.t1 | MTR_6g028120 | 84.401 | 609 | 95 | 0 | 20 | 628 | 1 | 609 | 0.0 | 1079 |
| MS.gene66993.t1 | MTR_3g079750 | 75.559 | 626 | 153 | 0 | 1 | 626 | 1 | 626 | 0.0 | 1003 |
| MS.gene66993.t1 | MTR_2g030000 | 72.873 | 623 | 165 | 2 | 6 | 624 | 4 | 626 | 0.0 | 961 |
| MS.gene66993.t1 | MTR_7g086030 | 70.654 | 627 | 183 | 1 | 1 | 626 | 1 | 627 | 0.0 | 941 |
| MS.gene66993.t1 | MTR_7g086030 | 72.213 | 601 | 167 | 0 | 26 | 626 | 2 | 602 | 0.0 | 932 |
| MS.gene66993.t1 | MTR_3g462820 | 58.569 | 601 | 246 | 3 | 22 | 620 | 16 | 615 | 0.0 | 728 |
| MS.gene66993.t1 | MTR_5g069800 | 54.409 | 601 | 261 | 5 | 28 | 620 | 5 | 600 | 0.0 | 675 |
| MS.gene66993.t1 | MTR_5g069740 | 54.333 | 600 | 251 | 6 | 28 | 620 | 5 | 588 | 0.0 | 657 |
| MS.gene66993.t1 | MTR_7g086010 | 66.034 | 474 | 148 | 3 | 1 | 463 | 1 | 472 | 0.0 | 640 |
| MS.gene66993.t1 | MTR_5g062650 | 27.726 | 642 | 346 | 27 | 38 | 621 | 60 | 641 | 1.56e-43 | 167 |
| MS.gene66993.t1 | MTR_5g062370 | 28.460 | 643 | 343 | 30 | 35 | 621 | 57 | 638 | 1.98e-43 | 167 |
| MS.gene66993.t1 | MTR_5g062320 | 28.305 | 643 | 344 | 30 | 35 | 621 | 55 | 636 | 3.70e-42 | 163 |
| MS.gene66993.t1 | MTR_3g074060 | 26.917 | 639 | 378 | 26 | 8 | 612 | 24 | 607 | 4.13e-42 | 163 |
| MS.gene66993.t1 | MTR_4g094285 | 26.220 | 656 | 365 | 26 | 4 | 612 | 29 | 612 | 7.61e-41 | 159 |
| MS.gene66993.t1 | MTR_5g062430 | 27.745 | 674 | 350 | 31 | 14 | 621 | 36 | 638 | 9.09e-41 | 159 |
| MS.gene66993.t1 | MTR_5g062370 | 28.693 | 589 | 320 | 28 | 35 | 584 | 57 | 584 | 6.40e-39 | 152 |
| MS.gene66993.t1 | MTR_7g109390 | 26.742 | 617 | 352 | 26 | 14 | 595 | 28 | 579 | 5.83e-38 | 150 |
| MS.gene66993.t1 | MTR_2g008240 | 25.657 | 647 | 362 | 27 | 13 | 612 | 39 | 613 | 4.81e-35 | 142 |
| MS.gene66993.t1 | MTR_2g034720 | 25.444 | 676 | 363 | 30 | 10 | 621 | 23 | 621 | 1.46e-33 | 137 |
| MS.gene66993.t1 | MTR_5g030860 | 27.288 | 579 | 326 | 29 | 95 | 612 | 64 | 608 | 2.13e-30 | 127 |
| MS.gene66993.t1 | MTR_1g106860 | 25.473 | 687 | 363 | 32 | 16 | 629 | 26 | 636 | 4.91e-30 | 126 |
| MS.gene66993.t1 | MTR_1g087240 | 23.556 | 675 | 370 | 26 | 14 | 621 | 23 | 618 | 4.62e-29 | 123 |
| MS.gene66993.t1 | MTR_5g069850 | 64.583 | 48 | 17 | 0 | 554 | 601 | 4 | 51 | 3.58e-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66993.t1 | AT5G04885 | 67.891 | 626 | 198 | 3 | 1 | 624 | 18 | 642 | 0.0 | 927 |
| MS.gene66993.t1 | AT5G04885 | 67.891 | 626 | 198 | 3 | 1 | 624 | 1 | 625 | 0.0 | 926 |
| MS.gene66993.t1 | AT5G04885 | 67.891 | 626 | 198 | 3 | 1 | 624 | 1 | 625 | 0.0 | 926 |
| MS.gene66993.t1 | AT5G20950 | 72.859 | 619 | 166 | 2 | 8 | 626 | 85 | 701 | 0.0 | 922 |
| MS.gene66993.t1 | AT5G20950 | 72.859 | 619 | 166 | 2 | 8 | 626 | 7 | 623 | 0.0 | 920 |
| MS.gene66993.t1 | AT5G20950 | 72.859 | 619 | 166 | 2 | 8 | 626 | 7 | 623 | 0.0 | 920 |
| MS.gene66993.t1 | AT5G20940 | 71.475 | 610 | 169 | 3 | 16 | 623 | 18 | 624 | 0.0 | 866 |
| MS.gene66993.t1 | AT3G47000 | 59.076 | 606 | 245 | 3 | 20 | 623 | 2 | 606 | 0.0 | 749 |
| MS.gene66993.t1 | AT3G47040 | 58.264 | 599 | 247 | 3 | 24 | 620 | 6 | 603 | 0.0 | 723 |
| MS.gene66993.t1 | AT3G47010 | 57.496 | 607 | 253 | 4 | 20 | 622 | 1 | 606 | 0.0 | 717 |
| MS.gene66993.t1 | AT3G47040 | 55.929 | 624 | 247 | 4 | 24 | 620 | 6 | 628 | 0.0 | 709 |
| MS.gene66993.t1 | AT3G47010 | 57.166 | 607 | 254 | 5 | 20 | 622 | 1 | 605 | 0.0 | 707 |
| MS.gene66993.t1 | AT3G62710 | 57.098 | 634 | 226 | 11 | 21 | 622 | 31 | 650 | 0.0 | 698 |
| MS.gene66993.t1 | AT3G47050 | 56.882 | 603 | 255 | 4 | 28 | 628 | 10 | 609 | 0.0 | 696 |
| MS.gene66993.t1 | AT3G47040 | 53.956 | 632 | 255 | 7 | 24 | 620 | 6 | 636 | 0.0 | 672 |
| MS.gene66993.t1 | AT3G47000 | 60.633 | 442 | 174 | 0 | 20 | 461 | 2 | 443 | 0.0 | 574 |
| MS.gene66993.t1 | AT3G47040 | 59.132 | 438 | 179 | 0 | 24 | 461 | 6 | 443 | 0.0 | 550 |
| MS.gene66993.t1 | AT3G47010 | 58.537 | 451 | 184 | 2 | 20 | 468 | 1 | 450 | 0.0 | 545 |
| MS.gene66993.t1 | AT3G47000 | 57.907 | 430 | 178 | 3 | 196 | 623 | 1 | 429 | 1.59e-178 | 513 |
| MS.gene66993.t1 | AT3G47010 | 54.312 | 429 | 192 | 4 | 196 | 622 | 1 | 427 | 4.82e-162 | 471 |
| MS.gene66993.t1 | AT3G47050 | 56.604 | 371 | 161 | 0 | 28 | 398 | 10 | 380 | 2.13e-152 | 445 |
| MS.gene66993.t1 | AT5G64570 | 26.307 | 612 | 336 | 24 | 38 | 605 | 69 | 609 | 1.28e-38 | 152 |
| MS.gene66993.t1 | AT5G49360 | 26.080 | 671 | 357 | 31 | 13 | 621 | 34 | 627 | 7.44e-36 | 144 |
| MS.gene66993.t1 | AT1G02640 | 26.418 | 670 | 357 | 30 | 14 | 621 | 30 | 625 | 9.33e-36 | 144 |
| MS.gene66993.t1 | AT3G19620 | 26.767 | 665 | 366 | 30 | 14 | 621 | 27 | 627 | 1.48e-35 | 143 |
| MS.gene66993.t1 | AT5G09730 | 25.843 | 623 | 347 | 25 | 26 | 604 | 47 | 598 | 1.10e-33 | 137 |
| MS.gene66993.t1 | AT5G64570 | 25.714 | 595 | 329 | 23 | 38 | 590 | 69 | 592 | 3.00e-33 | 135 |
| MS.gene66993.t1 | AT5G64570 | 27.389 | 471 | 288 | 20 | 162 | 605 | 8 | 451 | 8.08e-32 | 131 |
| MS.gene66993.t1 | AT5G10560 | 27.091 | 550 | 313 | 27 | 108 | 595 | 78 | 601 | 5.10e-31 | 129 |
| MS.gene66993.t1 | AT1G78060 | 26.723 | 595 | 348 | 26 | 34 | 595 | 44 | 583 | 7.53e-30 | 125 |
Find 146 sgRNAs with CRISPR-Local
Find 391 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAAGAACACGCTCCGTTTC+AGG | 0.132549 | 6.4:+3691047 | MS.gene66993:CDS |
| CTCGTTGCTGCTTGGCTTCC+TGG | 0.207531 | 6.4:+3692918 | MS.gene66993:CDS |
| AATACTTCCTCTTCCTAAAA+AGG | 0.213981 | 6.4:+3692043 | MS.gene66993:CDS |
| TTACTATAACTCGATCATTA+AGG | 0.274547 | 6.4:+3690943 | MS.gene66993:CDS |
| GCTATGACTGAGATCATTTC+AGG | 0.281297 | 6.4:+3690232 | MS.gene66993:CDS |
| TTTGCAGTAGCCTCTGGTTT+AGG | 0.288129 | 6.4:-3688172 | None:intergenic |
| CCGTTGTTTCCATTTGGATT+TGG | 0.289512 | 6.4:+3693065 | MS.gene66993:CDS |
| AGCTTGAACTTAACAATTTC+CGG | 0.306190 | 6.4:+3692786 | MS.gene66993:CDS |
| TCACCATTTGCTTCAGCATA+TGG | 0.318817 | 6.4:-3692762 | None:intergenic |
| TTTGAGAGTCAAGTTTGTTA+TGG | 0.319929 | 6.4:+3691714 | MS.gene66993:CDS |
| TATTGTTTCTGTTCCGTTAC+CGG | 0.323246 | 6.4:-3692805 | None:intergenic |
| CAATGAATTCTGTGTAGTTA+TGG | 0.331001 | 6.4:-3691621 | None:intergenic |
| CTTGGAATTCCAATGATCTA+TGG | 0.333242 | 6.4:+3688247 | MS.gene66993:CDS |
| TATGATCCGTTGTTTCCATT+TGG | 0.334756 | 6.4:+3693059 | MS.gene66993:CDS |
| ATGACTTTGGAAGAGAAAAT+TGG | 0.358935 | 6.4:+3687135 | MS.gene66993:CDS |
| TTGAGAGTCAAGTTTGTTAT+GGG | 0.359086 | 6.4:+3691715 | MS.gene66993:CDS |
| GGCTAGTGCTCTTCCATTGT+TGG | 0.361201 | 6.4:+3687028 | MS.gene66993:CDS |
| CCATGTCCTTGGAAGTTTAC+CGG | 0.364190 | 6.4:-3692991 | None:intergenic |
| ACACCATTTGACCAATTTGC+AGG | 0.367326 | 6.4:-3690271 | None:intergenic |
| AATGAATTCTGTGTAGTTAT+GGG | 0.379382 | 6.4:-3691620 | None:intergenic |
| GCCCTTGAATCCAGAGCAAC+TGG | 0.381746 | 6.4:+3689893 | MS.gene66993:CDS |
| TCTTACTTTCCAGCAACATA+TGG | 0.384344 | 6.4:-3690295 | None:intergenic |
| AACTACACAGAATTCATTGA+TGG | 0.385093 | 6.4:+3691625 | MS.gene66993:CDS |
| CAAAGGTGCAATCTCTTTGA+TGG | 0.397082 | 6.4:+3687005 | MS.gene66993:CDS |
| TCTTACAACTGAAGCTCATA+AGG | 0.405289 | 6.4:+3693088 | MS.gene66993:CDS |
| GCTAGTGCTCTTCCATTGTT+GGG | 0.406816 | 6.4:+3687029 | MS.gene66993:CDS |
| CATTCCTTTGCAGTAGCCTC+TGG | 0.410056 | 6.4:-3688178 | None:intergenic |
| TTTCCTCACAATGTTGGTCT+AGG | 0.410259 | 6.4:+3688316 | MS.gene66993:CDS |
| TTGACAGGAGCATAGAGAAT+TGG | 0.411711 | 6.4:+3691959 | MS.gene66993:intron |
| GCTTGTGCTAAGCACTTTGT+TGG | 0.414175 | 6.4:+3690839 | MS.gene66993:CDS |
| TTCCAGTTGCTCTGGATTCA+AGG | 0.417672 | 6.4:-3689895 | None:intergenic |
| GCATCATCAATTCTACTCAT+AGG | 0.418003 | 6.4:-3691679 | None:intergenic |
| TCATAACATCTACCCCATCT+TGG | 0.418401 | 6.4:-3690178 | None:intergenic |
| ATGCAAGGCGCAAAGACATA+TGG | 0.421138 | 6.4:-3689920 | None:intergenic |
| TTTGGCGATTATGGATTTAC+CGG | 0.423844 | 6.4:+3692972 | MS.gene66993:CDS |
| TGCCGATCAGCTCGGGAGCC+AGG | 0.427045 | 6.4:+3691771 | MS.gene66993:CDS |
| TCGTATGCAATTGTAGTAGT+TGG | 0.430484 | 6.4:+3692732 | MS.gene66993:CDS |
| TATGATCAATGAATTTCAAA+AGG | 0.431769 | 6.4:+3688207 | MS.gene66993:CDS |
| ATATGGAATTCCAGTTGCTC+TGG | 0.435207 | 6.4:-3689903 | None:intergenic |
| TACTATAACTCGATCATTAA+GGG | 0.440334 | 6.4:+3690944 | MS.gene66993:CDS |
| GAGATCATTTCAGGACTTCA+AGG | 0.443186 | 6.4:+3690241 | MS.gene66993:CDS |
| AATGGTGTTCCATATGTTGC+TGG | 0.443826 | 6.4:+3690286 | MS.gene66993:CDS |
| AATGCTAAGCAATTCATGTT+TGG | 0.446361 | 6.4:-3690909 | None:intergenic |
| TATGGAATTGATGCTGTTCA+TGG | 0.446679 | 6.4:+3688265 | MS.gene66993:CDS |
| AAAAGGGTGCTTTATCAACT+AGG | 0.448966 | 6.4:+3688224 | MS.gene66993:CDS |
| CAAGAACACGCTCCGTTTCA+GGG | 0.451407 | 6.4:+3691048 | MS.gene66993:CDS |
| TGAGAATCACCAACATTCAT+TGG | 0.457783 | 6.4:-3693035 | None:intergenic |
| CTTCCTGGTAGTGAAGGTTC+CGG | 0.459761 | 6.4:+3692933 | MS.gene66993:CDS |
| TCTTATTGACAGGATGACTT+TGG | 0.460565 | 6.4:+3687122 | MS.gene66993:CDS |
| GGAAGTCATGCTGATAATCT+AGG | 0.466444 | 6.4:+3692086 | MS.gene66993:CDS |
| AACTTAACAATTTCCGGTAA+CGG | 0.474082 | 6.4:+3692792 | MS.gene66993:CDS |
| ATTCAATGGCAAGGAGTTAG+TGG | 0.478157 | 6.4:+3692131 | MS.gene66993:CDS |
| ATCTAAATTACCGCGATGCA+AGG | 0.479628 | 6.4:-3689935 | None:intergenic |
| AGATATGGCTGTATAACAAC+AGG | 0.480262 | 6.4:-3692879 | None:intergenic |
| ACTAACTCCTTGCCATTGAA+TGG | 0.481890 | 6.4:-3692129 | None:intergenic |
| GTAATGAACAAGTACTTCAT+TGG | 0.483245 | 6.4:+3687198 | MS.gene66993:CDS |
| GCTAAGCACTTTGTTGGTGA+TGG | 0.484711 | 6.4:+3690845 | MS.gene66993:CDS |
| GTCTCATACTCAAGCTGGAA+TGG | 0.485589 | 6.4:+3690983 | MS.gene66993:CDS |
| CTCCCTGCAAATTGGTCAAA+TGG | 0.486667 | 6.4:+3690268 | MS.gene66993:CDS |
| GTTGTAAGACCAAATCCAAA+TGG | 0.487890 | 6.4:-3693074 | None:intergenic |
| GCATCAATTCCATAGATCAT+TGG | 0.488919 | 6.4:-3688256 | None:intergenic |
| GGTGCTTTATCAACTAGGCT+TGG | 0.489170 | 6.4:+3688229 | MS.gene66993:CDS |
| GGAAGAGAAAATTGGTCAGA+TGG | 0.489826 | 6.4:+3687143 | MS.gene66993:CDS |
| AAAGGTGCAATCTCTTTGAT+GGG | 0.490623 | 6.4:+3687006 | MS.gene66993:CDS |
| GGGAGTGTTCTAAGTGGTGG+AGG | 0.490799 | 6.4:+3688142 | MS.gene66993:intron |
| CAGAGGCTACTGCAAAGGAA+TGG | 0.491605 | 6.4:+3688179 | MS.gene66993:CDS |
| AAGGTGATCTCCCTGCAAAT+TGG | 0.492317 | 6.4:+3690260 | MS.gene66993:CDS |
| TTGACGGACTCGTTGCTGCT+TGG | 0.493350 | 6.4:+3692910 | MS.gene66993:CDS |
| TCCTTGATTCGAGTATTCAA+TGG | 0.493545 | 6.4:-3687099 | None:intergenic |
| AGAGGCTACTGCAAAGGAAT+GGG | 0.494253 | 6.4:+3688180 | MS.gene66993:CDS |
| CCAATCCTCTTCACTAGTTG+AGG | 0.494477 | 6.4:-3689860 | None:intergenic |
| ACAGCCATGCCGATCAGCTC+GGG | 0.494871 | 6.4:+3691764 | MS.gene66993:CDS |
| ACAGTCTTAAACCATGTCCT+TGG | 0.500169 | 6.4:-3693002 | None:intergenic |
| GGGCCTATTTGAAAATCCAT+TGG | 0.500709 | 6.4:+3691735 | MS.gene66993:CDS |
| GCCATTGAATACTCGAATCA+AGG | 0.509987 | 6.4:+3687098 | MS.gene66993:CDS |
| CCATATCTTGAGAAAATTGA+CGG | 0.510069 | 6.4:+3692894 | MS.gene66993:CDS |
| CTTCCATTGTTGGGTAGCAA+TGG | 0.513541 | 6.4:+3687038 | MS.gene66993:CDS |
| CACCATTTGACCAATTTGCA+GGG | 0.515585 | 6.4:-3690270 | None:intergenic |
| GGCTCCCGAGCTGATCGGCA+TGG | 0.516722 | 6.4:-3691768 | None:intergenic |
| ATTCTCCTTGTAGACTACCT+TGG | 0.521506 | 6.4:-3692676 | None:intergenic |
| CAATCCTCTTCACTAGTTGA+GGG | 0.521545 | 6.4:-3689859 | None:intergenic |
| TCATGGTCTCATACTCAAGC+TGG | 0.522463 | 6.4:+3690978 | MS.gene66993:CDS |
| GCTTGGCTTCCTGGTAGTGA+AGG | 0.524504 | 6.4:+3692927 | MS.gene66993:CDS |
| CCGGTAAACTTCCAAGGACA+TGG | 0.527697 | 6.4:+3692991 | MS.gene66993:CDS |
| ACACCATATGCTGAAGCAAA+TGG | 0.527765 | 6.4:+3692759 | MS.gene66993:CDS |
| GATTTACCGGTAAACTTCCA+AGG | 0.527794 | 6.4:+3692985 | MS.gene66993:CDS |
| GGAAGCAGTGAGGAAATCAT+TGG | 0.529643 | 6.4:+3691986 | MS.gene66993:CDS |
| GGTGATGGTGGAACAACAAA+AGG | 0.530634 | 6.4:+3690860 | MS.gene66993:CDS |
| ACACCGGAACCTTCACTACC+AGG | 0.533359 | 6.4:-3692936 | None:intergenic |
| TCCAGTTGCTCTGGATTCAA+GGG | 0.539183 | 6.4:-3689894 | None:intergenic |
| ATAGGGAGTGTTCTAAGTGG+TGG | 0.539184 | 6.4:+3688139 | MS.gene66993:intron |
| AGGTGTGTAGAGATCCAAGA+TGG | 0.539251 | 6.4:+3690164 | MS.gene66993:intron |
| ATGATCAATGAATTTCAAAA+GGG | 0.542985 | 6.4:+3688208 | MS.gene66993:CDS |
| TAGGATATCAATGTGGTGGA+TGG | 0.546231 | 6.4:+3692105 | MS.gene66993:CDS |
| GCTAATCGCGATTTAGTCAC+CGG | 0.549662 | 6.4:+3691019 | MS.gene66993:CDS |
| GGTAAAGTATTACCCTGAAA+CGG | 0.549732 | 6.4:-3691060 | None:intergenic |
| TACAGCCATGCCGATCAGCT+CGG | 0.550873 | 6.4:+3691763 | MS.gene66993:CDS |
| TGTGTCGTTGTGTTAGTCAC+AGG | 0.555075 | 6.4:+3692852 | MS.gene66993:CDS |
| GAAGTACTTGTTCATTACTT+CGG | 0.556130 | 6.4:-3687193 | None:intergenic |
| ATTGAAGCCGGAGTGAATGC+TGG | 0.559498 | 6.4:+3691373 | MS.gene66993:CDS |
| AAGCACTTTGTTGGTGATGG+TGG | 0.566034 | 6.4:+3690848 | MS.gene66993:CDS |
| CCTCAACTAGTGAAGAGGAT+TGG | 0.567752 | 6.4:+3689860 | MS.gene66993:CDS |
| TCATTGGTGCTCTTAAAGAA+TGG | 0.568557 | 6.4:+3692002 | MS.gene66993:CDS |
| GAATCAAGGATCTTATTGAC+AGG | 0.568861 | 6.4:+3687112 | MS.gene66993:CDS |
| ATGATCGAGTTATAGTAAGC+TGG | 0.571426 | 6.4:-3690938 | None:intergenic |
| TACACGTATTCAATTGAAGC+CGG | 0.578326 | 6.4:+3691361 | MS.gene66993:CDS |
| CAGATTGGGAGGGAATTGAC+AGG | 0.582056 | 6.4:+3691314 | MS.gene66993:CDS |
| GTGGTGGATGGACCATTCAA+TGG | 0.584567 | 6.4:+3692117 | MS.gene66993:CDS |
| AGAAACCAAGGTAGTCTACA+AGG | 0.587470 | 6.4:+3692671 | MS.gene66993:CDS |
| TAAGGGTGTCTTAACCGTCA+TGG | 0.598488 | 6.4:+3690961 | MS.gene66993:CDS |
| CTGCCATTGCTACCCAACAA+TGG | 0.601312 | 6.4:-3687041 | None:intergenic |
| GTCAATACCAGCATTCACTC+CGG | 0.601462 | 6.4:-3691380 | None:intergenic |
| TAAACCAGAGGCTACTGCAA+AGG | 0.602801 | 6.4:+3688174 | MS.gene66993:CDS |
| TCTTTCGTAGAAATGGTCAA+AGG | 0.603766 | 6.4:+3686988 | None:intergenic |
| TTGGTGCTCTTAAAGAATGG+TGG | 0.605581 | 6.4:+3692005 | MS.gene66993:CDS |
| GGATGGACCATTCAATGGCA+AGG | 0.608097 | 6.4:+3692122 | MS.gene66993:CDS |
| AGGAGCATAGAGAATTGGCT+AGG | 0.609615 | 6.4:+3691964 | MS.gene66993:intron |
| ATGAATTCTGTGTAGTTATG+GGG | 0.610407 | 6.4:-3691619 | None:intergenic |
| GCATGGCTGTAATCAGCCAA+TGG | 0.611170 | 6.4:-3691751 | None:intergenic |
| CCAAATCCAAATGGAAACAA+CGG | 0.611420 | 6.4:-3693065 | None:intergenic |
| TTTATAGGGAGTGTTCTAAG+TGG | 0.615243 | 6.4:+3688136 | MS.gene66993:intron |
| CACAGTCGACAAAGAAACCA+AGG | 0.621749 | 6.4:+3692659 | MS.gene66993:CDS |
| GGTGTGTAGAGATCCAAGAT+GGG | 0.624358 | 6.4:+3690165 | MS.gene66993:intron |
| GATCAGTTGCCAATGAATGT+TGG | 0.625929 | 6.4:+3693026 | MS.gene66993:CDS |
| GGAGCATAGAGAATTGGCTA+GGG | 0.629421 | 6.4:+3691965 | MS.gene66993:intron |
| GGGACCCTCAACTAGTGAAG+AGG | 0.629508 | 6.4:+3689855 | MS.gene66993:intron |
| TTTGTCATATCAGATTGGGA+GGG | 0.632775 | 6.4:+3691304 | MS.gene66993:CDS |
| GAGCGTGTTCTTGAGAAAGC+CGG | 0.633543 | 6.4:-3691038 | None:intergenic |
| ACAATAAACAATGTATGCAG+CGG | 0.645602 | 6.4:+3692822 | MS.gene66993:CDS |
| TGTCTTTGCGCCTTGCATCG+CGG | 0.650545 | 6.4:+3689925 | MS.gene66993:CDS |
| GCTCCTAGACCAACATTGTG+AGG | 0.653822 | 6.4:-3688319 | None:intergenic |
| AAACAAAACATCAGTAACAC+CGG | 0.653929 | 6.4:-3692952 | None:intergenic |
| TACGTGTAGTTAGCATGAGG+AGG | 0.654039 | 6.4:-3691346 | None:intergenic |
| AATCTAGGATATCAATGTGG+TGG | 0.656695 | 6.4:+3692101 | MS.gene66993:CDS |
| AGTGGCAATAACATTACTAG+TGG | 0.658929 | 6.4:+3692149 | MS.gene66993:CDS |
| GTGTGTAGAGATCCAAGATG+GGG | 0.659919 | 6.4:+3690166 | MS.gene66993:CDS |
| AACCTGGCTCCCGAGCTGAT+CGG | 0.661694 | 6.4:-3691773 | None:intergenic |
| ATGTTGGTCTAGGAGCTACA+AGG | 0.672283 | 6.4:+3688326 | MS.gene66993:CDS |
| GAATACGTGTAGTTAGCATG+AGG | 0.678521 | 6.4:-3691349 | None:intergenic |
| AAGGTGCAATCTCTTTGATG+GGG | 0.679232 | 6.4:+3687007 | MS.gene66993:CDS |
| AACAACAAAAGGAATCAATG+AGG | 0.693599 | 6.4:+3690871 | MS.gene66993:CDS |
| AGGAAGTGTTCCTAAACCAG+AGG | 0.705485 | 6.4:+3688162 | MS.gene66993:CDS |
| GCTTGAGTATGAGACCATGA+CGG | 0.722634 | 6.4:-3690975 | None:intergenic |
| AGTGAATGCTGGTATTGACA+TGG | 0.729525 | 6.4:+3691384 | MS.gene66993:CDS |
| AATTGGCTAGGGAAGCAGTG+AGG | 0.731289 | 6.4:+3691976 | MS.gene66993:CDS |
| GATAATCTAGGATATCAATG+TGG | 0.794698 | 6.4:+3692098 | MS.gene66993:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAATTTTTTTATTT+TGG | - | chr6.4:3688606-3688625 | None:intergenic | 0.0% |
| !! | AAATAAATAAAAATTACAAG+TGG | + | chr6.4:3688621-3688640 | MS.gene66993:intron | 10.0% |
| !! | TTTAAAAGACAAAAAAATTT+AGG | - | chr6.4:3687236-3687255 | None:intergenic | 10.0% |
| !!! | ATTCATATTTTAATTGTTTT+AGG | + | chr6.4:3688752-3688771 | MS.gene66993:intron | 10.0% |
| !!! | TTAAAACTTTTAAAACAAAA+TGG | - | chr6.4:3688888-3688907 | None:intergenic | 10.0% |
| !! | AAAACCAAAAATTAACTTAA+GGG | - | chr6.4:3688857-3688876 | None:intergenic | 15.0% |
| !! | AAGATATTGCATTATATTAT+AGG | - | chr6.4:3688653-3688672 | None:intergenic | 15.0% |
| !! | AATAAATAAGTACGAAATTT+CGG | + | chr6.4:3687461-3687480 | MS.gene66993:intron | 15.0% |
| !! | ATAATTAAGACGATAAAATT+CGG | + | chr6.4:3689223-3689242 | MS.gene66993:intron | 15.0% |
| !! | ATTTATTACTTCGATAAATT+TGG | - | chr6.4:3689205-3689224 | None:intergenic | 15.0% |
| !! | CTATATTCACATTATAATTT+AGG | + | chr6.4:3691859-3691878 | MS.gene66993:intron | 15.0% |
| !! | TAAAAAATGACTAATAAAAG+AGG | + | chr6.4:3689462-3689481 | MS.gene66993:intron | 15.0% |
| !! | TACAATTAAGACAAAAAATT+TGG | + | chr6.4:3689514-3689533 | MS.gene66993:intron | 15.0% |
| !! | TTTGATTATAAATTCAACTT+TGG | + | chr6.4:3690673-3690692 | MS.gene66993:intron | 15.0% |
| !!! | AAAACTAAGAAACTTTTTTT+AGG | - | chr6.4:3687518-3687537 | None:intergenic | 15.0% |
| !!! | AAACTAAGAAACTTTTTTTA+GGG | - | chr6.4:3687517-3687536 | None:intergenic | 15.0% |
| !!! | AATTTCGTACTTATTTATTT+TGG | - | chr6.4:3687460-3687479 | None:intergenic | 15.0% |
| !!! | ATGTTTTAAAAGTTTTAAGT+TGG | - | chr6.4:3689123-3689142 | None:intergenic | 15.0% |
| !!! | ATTTCGTACTTATTTATTTT+GGG | - | chr6.4:3687459-3687478 | None:intergenic | 15.0% |
| !!! | ATTTTTAATTTTGACAATTC+CGG | - | chr6.4:3689252-3689271 | None:intergenic | 15.0% |
| !!! | CTTAAAACTTTTAAAACATA+AGG | + | chr6.4:3689124-3689143 | MS.gene66993:intron | 15.0% |
| !!! | GATTTTAAATAATCTAATGA+AGG | - | chr6.4:3692702-3692721 | None:intergenic | 15.0% |
| !!! | GTCTTTTGTTAATAATTTTA+TGG | + | chr6.4:3689658-3689677 | MS.gene66993:intron | 15.0% |
| !!! | TTTTAAACAGTCATAATAAT+TGG | + | chr6.4:3690339-3690358 | MS.gene66993:intron | 15.0% |
| !! | AATAACAATTTGATACAGTT+CGG | + | chr6.4:3690394-3690413 | MS.gene66993:intron | 20.0% |
| !! | AATAAGTAAAGATACATTTG+AGG | + | chr6.4:3689721-3689740 | MS.gene66993:intron | 20.0% |
| !! | ATGATCAATGAATTTCAAAA+GGG | + | chr6.4:3688208-3688227 | MS.gene66993:CDS | 20.0% |
| !! | CAAATGTATCTTTACTTATT+TGG | - | chr6.4:3689721-3689740 | None:intergenic | 20.0% |
| !! | GAAAACCAAAAATTAACTTA+AGG | - | chr6.4:3688858-3688877 | None:intergenic | 20.0% |
| !! | GCAAAGTTATAATTAAATAG+TGG | + | chr6.4:3687837-3687856 | MS.gene66993:intron | 20.0% |
| !! | TAAGATTTCAACATACTTTA+AGG | - | chr6.4:3692250-3692269 | None:intergenic | 20.0% |
| !! | TATGATCAATGAATTTCAAA+AGG | + | chr6.4:3688207-3688226 | MS.gene66993:CDS | 20.0% |
| !! | TTATTATTAGGAATTGAACT+CGG | + | chr6.4:3691453-3691472 | MS.gene66993:intron | 20.0% |
| !! | TTTATCATTATTCATGTCAT+AGG | - | chr6.4:3690758-3690777 | None:intergenic | 20.0% |
| !! | TTTATTGTATTCAAATCCAA+AGG | + | chr6.4:3688406-3688425 | MS.gene66993:intron | 20.0% |
| !!! | AATGTATTTTACGAAATAGA+GGG | - | chr6.4:3692450-3692469 | None:intergenic | 20.0% |
| !!! | ATTATCGTATAAATTTTGCA+TGG | - | chr6.4:3691833-3691852 | None:intergenic | 20.0% |
| !!! | GTGAAAAAGAATTAGTTTTT+CGG | + | chr6.4:3688366-3688385 | MS.gene66993:intron | 20.0% |
| !!! | TAATGTATTTTACGAAATAG+AGG | - | chr6.4:3692451-3692470 | None:intergenic | 20.0% |
| !!! | TATAGTTCGATTTTTTGTAA+AGG | + | chr6.4:3690427-3690446 | MS.gene66993:intron | 20.0% |
| !!! | TTTTGTCTTAATTGTATGTT+TGG | - | chr6.4:3689510-3689529 | None:intergenic | 20.0% |
| !!! | TTTTTAATTTTGACAATTCC+GGG | - | chr6.4:3689251-3689270 | None:intergenic | 20.0% |
| ! | AACCTCAATTGAAATTACAT+TGG | - | chr6.4:3687323-3687342 | None:intergenic | 25.0% |
| ! | AAGACGTGACAATAAATTAT+AGG | + | chr6.4:3691153-3691172 | MS.gene66993:intron | 25.0% |
| ! | AATGAATTCTGTGTAGTTAT+GGG | - | chr6.4:3691623-3691642 | None:intergenic | 25.0% |
| ! | AATTGCATACGAAAAATCAT+TGG | - | chr6.4:3692724-3692743 | None:intergenic | 25.0% |
| ! | ACCTCAATTGAAATTACATT+GGG | - | chr6.4:3687322-3687341 | None:intergenic | 25.0% |
| ! | ATCGAATTGGTAAAAAAGTT+TGG | - | chr6.4:3690489-3690508 | None:intergenic | 25.0% |
| ! | GATAAAATTTGTCTAAGTGT+TGG | + | chr6.4:3690772-3690791 | MS.gene66993:intron | 25.0% |
| ! | GATTTGTATTTAAACCAAAC+CGG | - | chr6.4:3692428-3692447 | None:intergenic | 25.0% |
| ! | GGAACCTAAAATAAACATAA+GGG | + | chr6.4:3689156-3689175 | MS.gene66993:intron | 25.0% |
| ! | TAAAACATAAGGAAACAACT+TGG | + | chr6.4:3689135-3689154 | MS.gene66993:intron | 25.0% |
| ! | TACTATAACTCGATCATTAA+GGG | + | chr6.4:3690944-3690963 | MS.gene66993:CDS | 25.0% |
| ! | TCAATAAAAGCAATTGATGT+AGG | - | chr6.4:3690639-3690658 | None:intergenic | 25.0% |
| ! | TCGAATTGGTAAAAAAGTTT+GGG | - | chr6.4:3690488-3690507 | None:intergenic | 25.0% |
| ! | TGGAACCTAAAATAAACATA+AGG | + | chr6.4:3689155-3689174 | MS.gene66993:intron | 25.0% |
| ! | TTAAACTCAATATCATGTGA+CGG | + | chr6.4:3689059-3689078 | MS.gene66993:intron | 25.0% |
| ! | TTACTATAACTCGATCATTA+AGG | + | chr6.4:3690943-3690962 | MS.gene66993:CDS | 25.0% |
| ! | TTGACAATAAGTGTTTGTAT+AGG | + | chr6.4:3690144-3690163 | MS.gene66993:intron | 25.0% |
| !! | ATGCCAAATAGTTTGTATTA+GGG | + | chr6.4:3688084-3688103 | MS.gene66993:intron | 25.0% |
| !! | GTAAGATCGTTTAAAATGTT+TGG | + | chr6.4:3691928-3691947 | MS.gene66993:intron | 25.0% |
| !! | TGATCCCTTAAGTTAATTTT+TGG | + | chr6.4:3688850-3688869 | MS.gene66993:intron | 25.0% |
| !! | TTGACATGAAATTTTGTGTT+TGG | + | chr6.4:3688779-3688798 | MS.gene66993:intron | 25.0% |
| !! | TTTCAATGTGAGTAACATTT+TGG | + | chr6.4:3689096-3689115 | MS.gene66993:intron | 25.0% |
| !!! | ACTTTTTTACCAATTCGATT+CGG | + | chr6.4:3690490-3690509 | MS.gene66993:intron | 25.0% |
| !!! | AGTATTTTTGAAGCCTTTTT+AGG | - | chr6.4:3692059-3692078 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTAGGGGTCTATT+AGG | + | chr6.4:3687491-3687510 | MS.gene66993:intron | 25.0% |
| !!! | TTTGAGTGATGTTTTTTTGA+GGG | + | chr6.4:3688684-3688703 | MS.gene66993:intron | 25.0% |
| !!! | TTTTGAGTGATGTTTTTTTG+AGG | + | chr6.4:3688683-3688702 | MS.gene66993:intron | 25.0% |
| AAACAAAACATCAGTAACAC+CGG | - | chr6.4:3692955-3692974 | None:intergenic | 30.0% | |
| AACAACAAAAGGAATCAATG+AGG | + | chr6.4:3690871-3690890 | MS.gene66993:CDS | 30.0% | |
| AACATCACTCAAAATCTCAA+AGG | - | chr6.4:3688677-3688696 | None:intergenic | 30.0% | |
| AACTACACAGAATTCATTGA+TGG | + | chr6.4:3691625-3691644 | MS.gene66993:CDS | 30.0% | |
| AACTTAACAATTTCCGGTAA+CGG | + | chr6.4:3692792-3692811 | MS.gene66993:CDS | 30.0% | |
| AAGGCTTCTTCAGAATATTA+GGG | + | chr6.4:3693107-3693126 | MS.gene66993:CDS | 30.0% | |
| AATACTTCCTCTTCCTAAAA+AGG | + | chr6.4:3692043-3692062 | MS.gene66993:CDS | 30.0% | |
| AATGCTAAGCAATTCATGTT+TGG | - | chr6.4:3690912-3690931 | None:intergenic | 30.0% | |
| AATTACAGGAAGTAACAATC+GGG | - | chr6.4:3689375-3689394 | None:intergenic | 30.0% | |
| ACAATAAACAATGTATGCAG+CGG | + | chr6.4:3692822-3692841 | MS.gene66993:CDS | 30.0% | |
| ACCCAATGTAATTTCAATTG+AGG | + | chr6.4:3687318-3687337 | MS.gene66993:intron | 30.0% | |
| ACTTGATCGTTTAGAGATTT+GGG | + | chr6.4:3688956-3688975 | MS.gene66993:intron | 30.0% | |
| AGCTTGAACTTAACAATTTC+CGG | + | chr6.4:3692786-3692805 | MS.gene66993:CDS | 30.0% | |
| ATGAATTCTGTGTAGTTATG+GGG | - | chr6.4:3691622-3691641 | None:intergenic | 30.0% | |
| ATTGCTAATAGACACATTCT+TGG | + | chr6.4:3687881-3687900 | MS.gene66993:intron | 30.0% | |
| CAACCCTAATACAAACTATT+TGG | - | chr6.4:3688090-3688109 | None:intergenic | 30.0% | |
| CAATGAATTCTGTGTAGTTA+TGG | - | chr6.4:3691624-3691643 | None:intergenic | 30.0% | |
| CATTATTCATGTCATAGGAA+AGG | - | chr6.4:3690753-3690772 | None:intergenic | 30.0% | |
| CCATATCTTGAGAAAATTGA+CGG | + | chr6.4:3692894-3692913 | MS.gene66993:CDS | 30.0% | |
| CTAAAAGACACCTTCATAAA+AGG | - | chr6.4:3687818-3687837 | None:intergenic | 30.0% | |
| CTAAACCGTGTAGTAATAAT+CGG | - | chr6.4:3692321-3692340 | None:intergenic | 30.0% | |
| GAATTACAGGAAGTAACAAT+CGG | - | chr6.4:3689376-3689395 | None:intergenic | 30.0% | |
| GTAATGAACAAGTACTTCAT+TGG | + | chr6.4:3687198-3687217 | MS.gene66993:CDS | 30.0% | |
| TAACATTGTTTAACTGATGC+AGG | + | chr6.4:3692609-3692628 | MS.gene66993:intron | 30.0% | |
| TAAGGCTTCTTCAGAATATT+AGG | + | chr6.4:3693106-3693125 | MS.gene66993:CDS | 30.0% | |
| TGAATTTCCTTATGTGCATT+TGG | - | chr6.4:3687299-3687318 | None:intergenic | 30.0% | |
| TGAGGATTGAACTGATTAAT+AGG | + | chr6.4:3689739-3689758 | MS.gene66993:intron | 30.0% | |
| TGCATCAGTTAAACAATGTT+AGG | - | chr6.4:3692610-3692629 | None:intergenic | 30.0% | |
| TTGAACCGATTATTACTACA+CGG | + | chr6.4:3692313-3692332 | MS.gene66993:intron | 30.0% | |
| TTGCTAATAGACACATTCTT+GGG | + | chr6.4:3687882-3687901 | MS.gene66993:intron | 30.0% | |
| ! | AAACGAGAAAGCAATAGTTT+TGG | + | chr6.4:3689580-3689599 | MS.gene66993:intron | 30.0% |
| ! | AAACGTGCTTTCATGTTTTT+AGG | + | chr6.4:3688568-3688587 | MS.gene66993:intron | 30.0% |
| ! | ATAGAAGACACCTTTTATGA+AGG | + | chr6.4:3687805-3687824 | MS.gene66993:intron | 30.0% |
| ! | ATGACTTTGGAAGAGAAAAT+TGG | + | chr6.4:3687135-3687154 | MS.gene66993:CDS | 30.0% |
| ! | ATGATAGTGCAACATAGAAA+AGG | - | chr6.4:3690606-3690625 | None:intergenic | 30.0% |
| ! | ATTTTCTGCGATTCACAAAT+AGG | - | chr6.4:3689979-3689998 | None:intergenic | 30.0% |
| ! | GAAGTACTTGTTCATTACTT+CGG | - | chr6.4:3687196-3687215 | None:intergenic | 30.0% |
| ! | GAATTGAACTCGGTATTTTA+GGG | + | chr6.4:3691463-3691482 | MS.gene66993:intron | 30.0% |
| ! | GATAATCTAGGATATCAATG+TGG | + | chr6.4:3692098-3692117 | MS.gene66993:CDS | 30.0% |
| ! | GATGCCAAATAGTTTGTATT+AGG | + | chr6.4:3688083-3688102 | MS.gene66993:intron | 30.0% |
| ! | TGAAATAAGTTAGTCTCATC+CGG | + | chr6.4:3688932-3688951 | MS.gene66993:intron | 30.0% |
| ! | TTTTATAGCACTCAGAATTG+TGG | - | chr6.4:3692637-3692656 | None:intergenic | 30.0% |
| !! | AACGTGCTTTCATGTTTTTA+GGG | + | chr6.4:3688569-3688588 | MS.gene66993:intron | 30.0% |
| !! | ACTATTTTTCCTCACAATGT+TGG | + | chr6.4:3688310-3688329 | MS.gene66993:CDS | 30.0% |
| !! | GACATTCTTTTTCACTAGTA+AGG | - | chr6.4:3691656-3691675 | None:intergenic | 30.0% |
| !! | TCAGCCCTTATGTTTATTTT+AGG | - | chr6.4:3689163-3689182 | None:intergenic | 30.0% |
| !! | TTGAGAGTCAAGTTTGTTAT+GGG | + | chr6.4:3691715-3691734 | MS.gene66993:CDS | 30.0% |
| !! | TTTGAGAGTCAAGTTTGTTA+TGG | + | chr6.4:3691714-3691733 | MS.gene66993:CDS | 30.0% |
| !! | TTTTTAGGAAGAGGAAGTAT+TGG | - | chr6.4:3692044-3692063 | None:intergenic | 30.0% |
| !!! | ATTATCCGTTTCTGAGATTT+TGG | - | chr6.4:3687965-3687984 | None:intergenic | 30.0% |
| !!! | CTTTTTTACCAATTCGATTC+GGG | + | chr6.4:3690491-3690510 | MS.gene66993:intron | 30.0% |
| AAAGGAAACCAAACTGGTAA+TGG | - | chr6.4:3690522-3690541 | None:intergenic | 35.0% | |
| AAGACACACCTCTCTAATAA+AGG | - | chr6.4:3692491-3692510 | None:intergenic | 35.0% | |
| AATTTGGGTCCTAACCTAAT+GGG | - | chr6.4:3687923-3687942 | None:intergenic | 35.0% | |
| AGACACACCTCTCTAATAAA+GGG | - | chr6.4:3692490-3692509 | None:intergenic | 35.0% | |
| AGACCCCTAAAAAAAATTCG+AGG | - | chr6.4:3687488-3687507 | None:intergenic | 35.0% | |
| AGATATGGCTGTATAACAAC+AGG | - | chr6.4:3692882-3692901 | None:intergenic | 35.0% | |
| AGGCTTCTTCAGAATATTAG+GGG | + | chr6.4:3693108-3693127 | MS.gene66993:CDS | 35.0% | |
| AGTGGCAATAACATTACTAG+TGG | + | chr6.4:3692149-3692168 | MS.gene66993:CDS | 35.0% | |
| ATGATCGAGTTATAGTAAGC+TGG | - | chr6.4:3690941-3690960 | None:intergenic | 35.0% | |
| ATTTCAATTGAGGTTGCACA+TGG | + | chr6.4:3687328-3687347 | MS.gene66993:intron | 35.0% | |
| ATTTGTGCTTCACATTAAGG+AGG | + | chr6.4:3692571-3692590 | MS.gene66993:intron | 35.0% | |
| CACTTGATCGTTTAGAGATT+TGG | + | chr6.4:3688955-3688974 | MS.gene66993:intron | 35.0% | |
| CATAAGGGCTGATAGATATT+TGG | + | chr6.4:3689171-3689190 | MS.gene66993:intron | 35.0% | |
| CATGAAATCAAAGGCTTATG+AGG | - | chr6.4:3691084-3691103 | None:intergenic | 35.0% | |
| CATTATCTGCATCATTACGA+GGG | - | chr6.4:3691596-3691615 | None:intergenic | 35.0% | |
| CCAAATCCAAATGGAAACAA+CGG | - | chr6.4:3693068-3693087 | None:intergenic | 35.0% | |
| CTTGGAATTCCAATGATCTA+TGG | + | chr6.4:3688247-3688266 | MS.gene66993:CDS | 35.0% | |
| GAATCAAGGATCTTATTGAC+AGG | + | chr6.4:3687112-3687131 | MS.gene66993:CDS | 35.0% | |
| GCATCAATTCCATAGATCAT+TGG | - | chr6.4:3688259-3688278 | None:intergenic | 35.0% | |
| GCATCATCAATTCTACTCAT+AGG | - | chr6.4:3691682-3691701 | None:intergenic | 35.0% | |
| GCTAAAAAAGGACAGAATTC+AGG | - | chr6.4:3689398-3689417 | None:intergenic | 35.0% | |
| GGTATTTGTGCTTCACATTA+AGG | + | chr6.4:3692568-3692587 | MS.gene66993:intron | 35.0% | |
| GTTGTAAGACCAAATCCAAA+TGG | - | chr6.4:3693077-3693096 | None:intergenic | 35.0% | |
| TACACGTATTCAATTGAAGC+CGG | + | chr6.4:3691361-3691380 | MS.gene66993:CDS | 35.0% | |
| TATGGAATTGATGCTGTTCA+TGG | + | chr6.4:3688265-3688284 | MS.gene66993:CDS | 35.0% | |
| TCATTATCTGCATCATTACG+AGG | - | chr6.4:3691597-3691616 | None:intergenic | 35.0% | |
| TCGTATGCAATTGTAGTAGT+TGG | + | chr6.4:3692732-3692751 | MS.gene66993:CDS | 35.0% | |
| TCTTACAACTGAAGCTCATA+AGG | + | chr6.4:3693088-3693107 | MS.gene66993:CDS | 35.0% | |
| TCTTACTTTCCAGCAACATA+TGG | - | chr6.4:3690298-3690317 | None:intergenic | 35.0% | |
| TCTTATTGACAGGATGACTT+TGG | + | chr6.4:3687122-3687141 | MS.gene66993:CDS | 35.0% | |
| TGAGAATCACCAACATTCAT+TGG | - | chr6.4:3693038-3693057 | None:intergenic | 35.0% | |
| TGTCATGTTGTAATCCATCT+CGG | + | chr6.4:3687378-3687397 | MS.gene66993:intron | 35.0% | |
| TGTCGTAACCATGAAATCAA+AGG | - | chr6.4:3691093-3691112 | None:intergenic | 35.0% | |
| TTAGGGAAAAGATGTTGAGA+AGG | - | chr6.4:3692188-3692207 | None:intergenic | 35.0% | |
| TTCAATCGTCTTCAGATTGA+AGG | + | chr6.4:3692509-3692528 | MS.gene66993:intron | 35.0% | |
| TTCGGTTTAAACCACATTGT+TGG | + | chr6.4:3690459-3690478 | MS.gene66993:intron | 35.0% | |
| TTGTCAAATATTTGCCGAAG+CGG | - | chr6.4:3690131-3690150 | None:intergenic | 35.0% | |
| TTTGGCGATTATGGATTTAC+CGG | + | chr6.4:3692972-3692991 | MS.gene66993:CDS | 35.0% | |
| TTTGTCATATCAGATTGGGA+GGG | + | chr6.4:3691304-3691323 | MS.gene66993:CDS | 35.0% | |
| ! | AAAGGTGCAATCTCTTTGAT+GGG | + | chr6.4:3687006-3687025 | MS.gene66993:CDS | 35.0% |
| ! | AAATGTGTCACTGTCAAATC+TGG | + | chr6.4:3692547-3692566 | MS.gene66993:intron | 35.0% |
| ! | AAGCACGTTTGACAAAGTTT+TGG | - | chr6.4:3688558-3688577 | None:intergenic | 35.0% |
| ! | AATCTAGGATATCAATGTGG+TGG | + | chr6.4:3692101-3692120 | MS.gene66993:CDS | 35.0% |
| ! | ACGATTCTGACAATCGATTT+AGG | + | chr6.4:3688031-3688050 | MS.gene66993:intron | 35.0% |
| ! | ATTCTTGTTTCGGTTCAGAA+AGG | - | chr6.4:3690540-3690559 | None:intergenic | 35.0% |
| ! | CAGCAGTACTATTCTTGTTT+CGG | - | chr6.4:3690550-3690569 | None:intergenic | 35.0% |
| ! | CCGTCAATTTTCTCAAGATA+TGG | - | chr6.4:3692897-3692916 | None:intergenic | 35.0% |
| ! | CTCATAAGCCTTTGATTTCA+TGG | + | chr6.4:3691082-3691101 | MS.gene66993:intron | 35.0% |
| ! | CTGCATTAAGTTGTTCAAAC+CGG | - | chr6.4:3692374-3692393 | None:intergenic | 35.0% |
| ! | GATTTGACAGTGACACATTT+TGG | - | chr6.4:3692547-3692566 | None:intergenic | 35.0% |
| ! | GCTTCAAAAATACTTGTTGC+TGG | + | chr6.4:3692065-3692084 | MS.gene66993:CDS | 35.0% |
| ! | GGAATTGAACTCGGTATTTT+AGG | + | chr6.4:3691462-3691481 | MS.gene66993:intron | 35.0% |
| ! | GGAGATGAGTTCAGTATTTT+TGG | - | chr6.4:3692229-3692248 | None:intergenic | 35.0% |
| ! | GGTAAAGTATTACCCTGAAA+CGG | - | chr6.4:3691063-3691082 | None:intergenic | 35.0% |
| ! | GTGTAGTAATAATCGGTTCA+AGG | - | chr6.4:3692314-3692333 | None:intergenic | 35.0% |
| ! | GTGTATTTTCAACGTGAGTT+AGG | - | chr6.4:3687631-3687650 | None:intergenic | 35.0% |
| ! | TATGATCCGTTGTTTCCATT+TGG | + | chr6.4:3693059-3693078 | MS.gene66993:CDS | 35.0% |
| ! | TCATTGGTGCTCTTAAAGAA+TGG | + | chr6.4:3692002-3692021 | MS.gene66993:CDS | 35.0% |
| ! | TCCTTGATTCGAGTATTCAA+TGG | - | chr6.4:3687102-3687121 | None:intergenic | 35.0% |
| ! | TGCATTAAGTTGTTCAAACC+GGG | - | chr6.4:3692373-3692392 | None:intergenic | 35.0% |
| ! | TTTTGTCATATCAGATTGGG+AGG | + | chr6.4:3691303-3691322 | MS.gene66993:CDS | 35.0% |
| ! | TTTTTACATCCCAACTTGCA+GGG | + | chr6.4:3689835-3689854 | MS.gene66993:intron | 35.0% |
| !! | AAAAGGGTGCTTTATCAACT+AGG | + | chr6.4:3688224-3688243 | MS.gene66993:CDS | 35.0% |
| !! | AGTTTTGGTATGAAAGTGTG+AGG | + | chr6.4:3689595-3689614 | MS.gene66993:intron | 35.0% |
| !! | CAGCCAATGGATTTTCAAAT+AGG | - | chr6.4:3691741-3691760 | None:intergenic | 35.0% |
| !! | GAGATTTGGGTTGAGAATAT+TGG | + | chr6.4:3688969-3688988 | MS.gene66993:intron | 35.0% |
| !! | GCAAGAGTGTCAAACAATTA+GGG | - | chr6.4:3692205-3692224 | None:intergenic | 35.0% |
| !! | GGGTTTTGTCATATCAGATT+GGG | + | chr6.4:3691300-3691319 | MS.gene66993:intron | 35.0% |
| !! | TATTGTTTCTGTTCCGTTAC+CGG | - | chr6.4:3692808-3692827 | None:intergenic | 35.0% |
| !! | TGCAAGAGTGTCAAACAATT+AGG | - | chr6.4:3692206-3692225 | None:intergenic | 35.0% |
| !! | TTTATAGGGAGTGTTCTAAG+TGG | + | chr6.4:3688136-3688155 | MS.gene66993:intron | 35.0% |
| !! | TTTGAAGCCTTTTTAGGAAG+AGG | - | chr6.4:3692053-3692072 | None:intergenic | 35.0% |
| !!! | ACTCACATTTGGCTTTTTGA+TGG | + | chr6.4:3687663-3687682 | MS.gene66993:intron | 35.0% |
| !!! | ATTTGGCTTTTTGATGGGAA+TGG | + | chr6.4:3687669-3687688 | MS.gene66993:intron | 35.0% |
| !!! | CGGTCCTCGAATTTTTTTTA+GGG | + | chr6.4:3687481-3687500 | MS.gene66993:intron | 35.0% |
| !!! | CTCACATTTGGCTTTTTGAT+GGG | + | chr6.4:3687664-3687683 | MS.gene66993:intron | 35.0% |
| !!! | GATGTTTTGTTTGGCGATTA+TGG | + | chr6.4:3692963-3692982 | MS.gene66993:CDS | 35.0% |
| !!! | GGTCCTCGAATTTTTTTTAG+GGG | + | chr6.4:3687482-3687501 | MS.gene66993:intron | 35.0% |
| !!! | GGTGTTACTGATGTTTTGTT+TGG | + | chr6.4:3692954-3692973 | MS.gene66993:CDS | 35.0% |
| !!! | TATTTATTTTGGGCCTAGAG+CGG | - | chr6.4:3687449-3687468 | None:intergenic | 35.0% |
| !!! | TCGGTCCTCGAATTTTTTTT+AGG | + | chr6.4:3687480-3687499 | MS.gene66993:intron | 35.0% |
| !!! | TTTGGCTTTTTGATGGGAAT+GGG | + | chr6.4:3687670-3687689 | MS.gene66993:intron | 35.0% |
| !!! | TTTTTTACATCCCAACTTGC+AGG | + | chr6.4:3689834-3689853 | MS.gene66993:intron | 35.0% |
| AAATGTGAGTTAACCCACGT+AGG | - | chr6.4:3687653-3687672 | None:intergenic | 40.0% | |
| AAGGTGCAATCTCTTTGATG+GGG | + | chr6.4:3687007-3687026 | MS.gene66993:CDS | 40.0% | |
| AATGGTGTTCCATATGTTGC+TGG | + | chr6.4:3690286-3690305 | MS.gene66993:CDS | 40.0% | |
| ACACCATATGCTGAAGCAAA+TGG | + | chr6.4:3692759-3692778 | MS.gene66993:CDS | 40.0% | |
| ACACCATTTGACCAATTTGC+AGG | - | chr6.4:3690274-3690293 | None:intergenic | 40.0% | |
| ACAGTCTTAAACCATGTCCT+TGG | - | chr6.4:3693005-3693024 | None:intergenic | 40.0% | |
| ACGTTGAAAATACACCTACG+TGG | + | chr6.4:3687636-3687655 | MS.gene66993:intron | 40.0% | |
| ACTAACTCCTTGCCATTGAA+TGG | - | chr6.4:3692132-3692151 | None:intergenic | 40.0% | |
| ACTACACGGTTTAGTCATGT+TGG | + | chr6.4:3692327-3692346 | MS.gene66993:intron | 40.0% | |
| AGAAACCAAGGTAGTCTACA+AGG | + | chr6.4:3692671-3692690 | MS.gene66993:CDS | 40.0% | |
| ATATGGAATTCCAGTTGCTC+TGG | - | chr6.4:3689906-3689925 | None:intergenic | 40.0% | |
| ATCTAAATTACCGCGATGCA+AGG | - | chr6.4:3689938-3689957 | None:intergenic | 40.0% | |
| ATCTCTAAACGATCAAGTGC+CGG | - | chr6.4:3688954-3688973 | None:intergenic | 40.0% | |
| ATTCAATGGCAAGGAGTTAG+TGG | + | chr6.4:3692131-3692150 | MS.gene66993:CDS | 40.0% | |
| ATTCTCCTTGTAGACTACCT+TGG | - | chr6.4:3692679-3692698 | None:intergenic | 40.0% | |
| CAATCCTCTTCACTAGTTGA+GGG | - | chr6.4:3689862-3689881 | None:intergenic | 40.0% | |
| CAATTTGGGTCCTAACCTAA+TGG | - | chr6.4:3687924-3687943 | None:intergenic | 40.0% | |
| CACCATTTGACCAATTTGCA+GGG | - | chr6.4:3690273-3690292 | None:intergenic | 40.0% | |
| CGTTGAAAATACACCTACGT+GGG | + | chr6.4:3687637-3687656 | MS.gene66993:intron | 40.0% | |
| CTAATAGACACATTCTTGGG+TGG | + | chr6.4:3687885-3687904 | MS.gene66993:intron | 40.0% | |
| CTAGCAAAACCCATTAGGTT+AGG | + | chr6.4:3687911-3687930 | MS.gene66993:intron | 40.0% | |
| GAATACGTGTAGTTAGCATG+AGG | - | chr6.4:3691352-3691371 | None:intergenic | 40.0% | |
| GACACACCTCTCTAATAAAG+GGG | - | chr6.4:3692489-3692508 | None:intergenic | 40.0% | |
| GAGATCATTTCAGGACTTCA+AGG | + | chr6.4:3690241-3690260 | MS.gene66993:CDS | 40.0% | |
| GATCAGTTGCCAATGAATGT+TGG | + | chr6.4:3693026-3693045 | MS.gene66993:CDS | 40.0% | |
| GATTTACCGGTAAACTTCCA+AGG | + | chr6.4:3692985-3693004 | MS.gene66993:CDS | 40.0% | |
| GCCATTGAATACTCGAATCA+AGG | + | chr6.4:3687098-3687117 | MS.gene66993:CDS | 40.0% | |
| GCTATGACTGAGATCATTTC+AGG | + | chr6.4:3690232-3690251 | MS.gene66993:CDS | 40.0% | |
| GGAAGAGAAAATTGGTCAGA+TGG | + | chr6.4:3687143-3687162 | MS.gene66993:CDS | 40.0% | |
| GGAAGTCATGCTGATAATCT+AGG | + | chr6.4:3692086-3692105 | MS.gene66993:CDS | 40.0% | |
| GGACAGAATTCAGGAATTAC+AGG | - | chr6.4:3689389-3689408 | None:intergenic | 40.0% | |
| GGGAATGGGCAATTCTAAAT+GGG | + | chr6.4:3687684-3687703 | MS.gene66993:intron | 40.0% | |
| GGGCCTATTTGAAAATCCAT+TGG | + | chr6.4:3691735-3691754 | MS.gene66993:CDS | 40.0% | |
| GTGAGTTAACTCAAGTAGCA+CGG | - | chr6.4:3687597-3687616 | None:intergenic | 40.0% | |
| GTTCAGAAAGGAAACCAAAC+TGG | - | chr6.4:3690528-3690547 | None:intergenic | 40.0% | |
| TAAGACTAATCAACACCACC+AGG | - | chr6.4:3691534-3691553 | None:intergenic | 40.0% | |
| TAGGTTAGGACCCAAATTGT+AGG | + | chr6.4:3687925-3687944 | MS.gene66993:intron | 40.0% | |
| TATTAGCAATCCACACCTCA+AGG | - | chr6.4:3687871-3687890 | None:intergenic | 40.0% | |
| TCACCATTTGCTTCAGCATA+TGG | - | chr6.4:3692765-3692784 | None:intergenic | 40.0% | |
| TCATAACATCTACCCCATCT+TGG | - | chr6.4:3690181-3690200 | None:intergenic | 40.0% | |
| TGAGTTAACTCAAGTAGCAC+GGG | - | chr6.4:3687596-3687615 | None:intergenic | 40.0% | |
| TGGGAATGGGCAATTCTAAA+TGG | + | chr6.4:3687683-3687702 | MS.gene66993:intron | 40.0% | |
| TGTGCGCAGAAAGCTAAAAA+AGG | - | chr6.4:3689410-3689429 | None:intergenic | 40.0% | |
| TTGTAAAGGTAGCTCTCGTT+CGG | + | chr6.4:3690441-3690460 | MS.gene66993:intron | 40.0% | |
| TTTCCTTATGTGCATTTGGC+AGG | - | chr6.4:3687295-3687314 | None:intergenic | 40.0% | |
| ! | AACCAGTTGAAGTGTTTGGA+CGG | - | chr6.4:3692288-3692307 | None:intergenic | 40.0% |
| ! | ATAGTGGAAATCACACCTTG+AGG | + | chr6.4:3687853-3687872 | MS.gene66993:intron | 40.0% |
| ! | ATCTTGGTTCGACCAAAATC+GGG | - | chr6.4:3689304-3689323 | None:intergenic | 40.0% |
| ! | CAAAGGTGCAATCTCTTTGA+TGG | + | chr6.4:3687005-3687024 | MS.gene66993:CDS | 40.0% |
| ! | CATCTTGGTTCGACCAAAAT+CGG | - | chr6.4:3689305-3689324 | None:intergenic | 40.0% |
| ! | CCGTTGTTTCCATTTGGATT+TGG | + | chr6.4:3693065-3693084 | MS.gene66993:CDS | 40.0% |
| ! | CTCAATATCATGTGACGGAA+TGG | + | chr6.4:3689064-3689083 | MS.gene66993:intron | 40.0% |
| ! | GACAATCGATTTAGGTCAGA+TGG | + | chr6.4:3688039-3688058 | MS.gene66993:intron | 40.0% |
| ! | GGAAAGACAAAGTGTCATCT+AGG | + | chr6.4:3689483-3689502 | MS.gene66993:intron | 40.0% |
| ! | GTTCAACCAGTTGAAGTGTT+TGG | - | chr6.4:3692292-3692311 | None:intergenic | 40.0% |
| ! | TACGTGGGTTAACTCACATT+TGG | + | chr6.4:3687652-3687671 | MS.gene66993:intron | 40.0% |
| ! | TAGGATATCAATGTGGTGGA+TGG | + | chr6.4:3692105-3692124 | MS.gene66993:CDS | 40.0% |
| ! | TGGGTTGAGAATATTGGTGT+TGG | + | chr6.4:3688975-3688994 | MS.gene66993:intron | 40.0% |
| ! | TTGACAGGAGCATAGAGAAT+TGG | + | chr6.4:3691959-3691978 | MS.gene66993:intron | 40.0% |
| ! | TTGGTGCTCTTAAAGAATGG+TGG | + | chr6.4:3692005-3692024 | MS.gene66993:CDS | 40.0% |
| ! | TTTCCTCACAATGTTGGTCT+AGG | + | chr6.4:3688316-3688335 | MS.gene66993:CDS | 40.0% |
| !! | AGTGAATGCTGGTATTGACA+TGG | + | chr6.4:3691384-3691403 | MS.gene66993:CDS | 40.0% |
| !! | ATCTCGGCCATTAATTTGCA+GGG | + | chr6.4:3687394-3687413 | MS.gene66993:intron | 40.0% |
| !! | TCATGTTGGTGGTTTGATCA+CGG | + | chr6.4:3692341-3692360 | MS.gene66993:intron | 40.0% |
| !! | TGTTTGGTGCGTAATTTGAC+AGG | + | chr6.4:3691944-3691963 | MS.gene66993:intron | 40.0% |
| !!! | ATCCGTTTCTGAGATTTTGG+TGG | - | chr6.4:3687962-3687981 | None:intergenic | 40.0% |
| AACCGTCCAAACACTTCAAC+TGG | + | chr6.4:3692283-3692302 | MS.gene66993:intron | 45.0% | |
| AAGGTGATCTCCCTGCAAAT+TGG | + | chr6.4:3690260-3690279 | MS.gene66993:CDS | 45.0% | |
| ACACCTCCCCTTTATTAGAG+AGG | + | chr6.4:3692480-3692499 | MS.gene66993:intron | 45.0% | |
| ACACCTCTCTAATAAAGGGG+AGG | - | chr6.4:3692486-3692505 | None:intergenic | 45.0% | |
| ACACGGTTTAGTCATGTTGG+TGG | + | chr6.4:3692330-3692349 | MS.gene66993:intron | 45.0% | |
| AGAGGCTACTGCAAAGGAAT+GGG | + | chr6.4:3688180-3688199 | MS.gene66993:CDS | 45.0% | |
| AGGTGTGTAGAGATCCAAGA+TGG | + | chr6.4:3690164-3690183 | MS.gene66993:intron | 45.0% | |
| ATGCAAGGCGCAAAGACATA+TGG | - | chr6.4:3689923-3689942 | None:intergenic | 45.0% | |
| CAAGCACTTGCACTAAATCC+TGG | + | chr6.4:3691513-3691532 | MS.gene66993:intron | 45.0% | |
| CACAGTCGACAAAGAAACCA+AGG | + | chr6.4:3692659-3692678 | MS.gene66993:CDS | 45.0% | |
| CAGGATTTAGTGCAAGTGCT+TGG | - | chr6.4:3691515-3691534 | None:intergenic | 45.0% | |
| CCAATCCTCTTCACTAGTTG+AGG | - | chr6.4:3689863-3689882 | None:intergenic | 45.0% | |
| CCATGTCCTTGGAAGTTTAC+CGG | - | chr6.4:3692994-3693013 | None:intergenic | 45.0% | |
| CCTCAACTAGTGAAGAGGAT+TGG | + | chr6.4:3689860-3689879 | MS.gene66993:CDS | 45.0% | |
| CGAAAGTTCTCGCTAGTATC+CGG | + | chr6.4:3692406-3692425 | MS.gene66993:intron | 45.0% | |
| CTACTTGAGTTAACTCACGC+TGG | + | chr6.4:3687599-3687618 | MS.gene66993:intron | 45.0% | |
| CTAGGGCGAACCTACAATTT+GGG | - | chr6.4:3687938-3687957 | None:intergenic | 45.0% | |
| CTCCCTGCAAATTGGTCAAA+TGG | + | chr6.4:3690268-3690287 | MS.gene66993:CDS | 45.0% | |
| CTGCAAATTAATGGCCGAGA+TGG | - | chr6.4:3687395-3687414 | None:intergenic | 45.0% | |
| CTGCGATTCACAAATAGGTG+AGG | - | chr6.4:3689974-3689993 | None:intergenic | 45.0% | |
| CTTCCATTGTTGGGTAGCAA+TGG | + | chr6.4:3687038-3687057 | MS.gene66993:CDS | 45.0% | |
| GATACGGCCCTGCAAATTAA+TGG | - | chr6.4:3687404-3687423 | None:intergenic | 45.0% | |
| GCTAATCGCGATTTAGTCAC+CGG | + | chr6.4:3691019-3691038 | MS.gene66993:CDS | 45.0% | |
| GCTAGTGCTCTTCCATTGTT+GGG | + | chr6.4:3687029-3687048 | MS.gene66993:CDS | 45.0% | |
| GCTTGAGTATGAGACCATGA+CGG | - | chr6.4:3690978-3690997 | None:intergenic | 45.0% | |
| GCTTGTGCTAAGCACTTTGT+TGG | + | chr6.4:3690839-3690858 | MS.gene66993:CDS | 45.0% | |
| GGAAGCAGTGAGGAAATCAT+TGG | + | chr6.4:3691986-3692005 | MS.gene66993:CDS | 45.0% | |
| GGAGCATAGAGAATTGGCTA+GGG | + | chr6.4:3691965-3691984 | MS.gene66993:intron | 45.0% | |
| GGCCACCAAAATCTCAGAAA+CGG | + | chr6.4:3687957-3687976 | MS.gene66993:intron | 45.0% | |
| GGCTCTTTGTGGCTCAAAAT+CGG | + | chr6.4:3689324-3689343 | MS.gene66993:intron | 45.0% | |
| GGCTTCTAGCAAAACCCATT+AGG | + | chr6.4:3687906-3687925 | MS.gene66993:intron | 45.0% | |
| GGGATGAACCATTACCAGTT+TGG | + | chr6.4:3690511-3690530 | MS.gene66993:intron | 45.0% | |
| GGTGCTTTATCAACTAGGCT+TGG | + | chr6.4:3688229-3688248 | MS.gene66993:CDS | 45.0% | |
| GGTGTGTAGAGATCCAAGAT+GGG | + | chr6.4:3690165-3690184 | MS.gene66993:intron | 45.0% | |
| GTCAATACCAGCATTCACTC+CGG | - | chr6.4:3691383-3691402 | None:intergenic | 45.0% | |
| GTCTCATACTCAAGCTGGAA+TGG | + | chr6.4:3690983-3691002 | MS.gene66993:CDS | 45.0% | |
| GTGTGTAGAGATCCAAGATG+GGG | + | chr6.4:3690166-3690185 | MS.gene66993:CDS | 45.0% | |
| TAAACCAGAGGCTACTGCAA+AGG | + | chr6.4:3688174-3688193 | MS.gene66993:CDS | 45.0% | |
| TACGTGTAGTTAGCATGAGG+AGG | - | chr6.4:3691349-3691368 | None:intergenic | 45.0% | |
| TCATGGTCTCATACTCAAGC+TGG | + | chr6.4:3690978-3690997 | MS.gene66993:CDS | 45.0% | |
| TGACCTGCCAAATGCACATA+AGG | + | chr6.4:3687289-3687308 | MS.gene66993:intron | 45.0% | |
| TGGTTCATCCCGAATCGAAT+TGG | - | chr6.4:3690502-3690521 | None:intergenic | 45.0% | |
| TTAGCAATGTTGCACCGCTT+CGG | + | chr6.4:3690114-3690133 | MS.gene66993:intron | 45.0% | |
| ! | AGGAGCATAGAGAATTGGCT+AGG | + | chr6.4:3691964-3691983 | MS.gene66993:intron | 45.0% |
| ! | ATGTTGGTCTAGGAGCTACA+AGG | + | chr6.4:3688326-3688345 | MS.gene66993:CDS | 45.0% |
| ! | GCTAAGCACTTTGTTGGTGA+TGG | + | chr6.4:3690845-3690864 | MS.gene66993:CDS | 45.0% |
| ! | TCCAGTTGCTCTGGATTCAA+GGG | - | chr6.4:3689897-3689916 | None:intergenic | 45.0% |
| ! | TGCAACTTTCTTGCTGTGCA+AGG | - | chr6.4:3690819-3690838 | None:intergenic | 45.0% |
| ! | TGTGTCGTTGTGTTAGTCAC+AGG | + | chr6.4:3692852-3692871 | MS.gene66993:CDS | 45.0% |
| ! | TTCCAGTTGCTCTGGATTCA+AGG | - | chr6.4:3689898-3689917 | None:intergenic | 45.0% |
| ! | TTTGCAGTAGCCTCTGGTTT+AGG | - | chr6.4:3688175-3688194 | None:intergenic | 45.0% |
| !! | AAGCACTTTGTTGGTGATGG+TGG | + | chr6.4:3690848-3690867 | MS.gene66993:CDS | 45.0% |
| !! | AGACGATAAAATTCGGTGCC+CGG | + | chr6.4:3689230-3689249 | MS.gene66993:intron | 45.0% |
| !! | AGGAAGTGTTCCTAAACCAG+AGG | + | chr6.4:3688162-3688181 | MS.gene66993:CDS | 45.0% |
| !! | ATAGGGAGTGTTCTAAGTGG+TGG | + | chr6.4:3688139-3688158 | MS.gene66993:intron | 45.0% |
| !! | CATCTCGGCCATTAATTTGC+AGG | + | chr6.4:3687393-3687412 | MS.gene66993:intron | 45.0% |
| !! | CGATTTTGGTCGAACCAAGA+TGG | + | chr6.4:3689303-3689322 | MS.gene66993:intron | 45.0% |
| !! | GGTGATGGTGGAACAACAAA+AGG | + | chr6.4:3690860-3690879 | MS.gene66993:CDS | 45.0% |
| !! | GTTTGATCACGGTTTTGTCC+CGG | + | chr6.4:3692352-3692371 | MS.gene66993:intron | 45.0% |
| !! | TAAGGGTGTCTTAACCGTCA+TGG | + | chr6.4:3690961-3690980 | MS.gene66993:CDS | 45.0% |
| !! | TCTGAGATTTTGGTGGCCTA+GGG | - | chr6.4:3687955-3687974 | None:intergenic | 45.0% |
| !!! | TTCTGAGATTTTGGTGGCCT+AGG | - | chr6.4:3687956-3687975 | None:intergenic | 45.0% |
| !! | TAATAATAATAAAAAATACA+TGG | - | chr6.4:3691442-3691461 | None:intergenic | 5.0% |
| !!! | AATTTTTAAAATTGTTTATA+GGG | + | chr6.4:3688122-3688141 | MS.gene66993:intron | 5.0% |
| !!! | ATAGTTTTTTTTTTTTTTTA+AGG | + | chr6.4:3688461-3688480 | MS.gene66993:intron | 5.0% |
| !!! | ATGTATTTTTTATTATTATT+AGG | + | chr6.4:3691441-3691460 | MS.gene66993:intron | 5.0% |
| !!! | TAATTTTTAAAATTGTTTAT+AGG | + | chr6.4:3688121-3688140 | MS.gene66993:intron | 5.0% |
| AACACACGCGAGAAGACCTT+TGG | - | chr6.4:3688425-3688444 | None:intergenic | 50.0% | |
| AATTGGCTAGGGAAGCAGTG+AGG | + | chr6.4:3691976-3691995 | MS.gene66993:CDS | 50.0% | |
| AGTTTGGGCGACCAACAATG+TGG | - | chr6.4:3690473-3690492 | None:intergenic | 50.0% | |
| ATTGAAGCCGGAGTGAATGC+TGG | + | chr6.4:3691373-3691392 | MS.gene66993:CDS | 50.0% | |
| CAAGAACACGCTCCGTTTCA+GGG | + | chr6.4:3691048-3691067 | MS.gene66993:CDS | 50.0% | |
| CAGAGGCTACTGCAAAGGAA+TGG | + | chr6.4:3688179-3688198 | MS.gene66993:CDS | 50.0% | |
| CAGATTGGGAGGGAATTGAC+AGG | + | chr6.4:3691314-3691333 | MS.gene66993:CDS | 50.0% | |
| CATTCCTTTGCAGTAGCCTC+TGG | - | chr6.4:3688181-3688200 | None:intergenic | 50.0% | |
| CCAAATTGTAGGTTCGCCCT+AGG | + | chr6.4:3687936-3687955 | MS.gene66993:intron | 50.0% | |
| CCGGTAAACTTCCAAGGACA+TGG | + | chr6.4:3692991-3693010 | MS.gene66993:CDS | 50.0% | |
| CCTAGGGCGAACCTACAATT+TGG | - | chr6.4:3687939-3687958 | None:intergenic | 50.0% | |
| CGAACCAAGATGGCTCTTTG+TGG | + | chr6.4:3689313-3689332 | MS.gene66993:intron | 50.0% | |
| CTGCCATTGCTACCCAACAA+TGG | - | chr6.4:3687044-3687063 | None:intergenic | 50.0% | |
| GAGCGTGTTCTTGAGAAAGC+CGG | - | chr6.4:3691041-3691060 | None:intergenic | 50.0% | |
| GCACTTGCACTAAATCCTGG+TGG | + | chr6.4:3691516-3691535 | MS.gene66993:intron | 50.0% | |
| GCATGGCTGTAATCAGCCAA+TGG | - | chr6.4:3691754-3691773 | None:intergenic | 50.0% | |
| GCTCCTAGACCAACATTGTG+AGG | - | chr6.4:3688322-3688341 | None:intergenic | 50.0% | |
| GGAAATCACACCTTGAGGTG+TGG | + | chr6.4:3687858-3687877 | MS.gene66993:intron | 50.0% | |
| GGATGGACCATTCAATGGCA+AGG | + | chr6.4:3692122-3692141 | MS.gene66993:CDS | 50.0% | |
| GGCTAGTGCTCTTCCATTGT+TGG | + | chr6.4:3687028-3687047 | MS.gene66993:CDS | 50.0% | |
| GTTCTCGCTAGTATCCGGTT+TGG | + | chr6.4:3692411-3692430 | MS.gene66993:intron | 50.0% | |
| TCAAGAACACGCTCCGTTTC+AGG | + | chr6.4:3691047-3691066 | MS.gene66993:CDS | 50.0% | |
| TCTGAGCTGATCGACTAACC+TGG | - | chr6.4:3691792-3691811 | None:intergenic | 50.0% | |
| TGAGCCACAAAGAGCCATCT+TGG | - | chr6.4:3689320-3689339 | None:intergenic | 50.0% | |
| ! | CTTCCTGGTAGTGAAGGTTC+CGG | + | chr6.4:3692933-3692952 | MS.gene66993:CDS | 50.0% |
| !! | CTGAAATCGGTGCCCGATTT+TGG | + | chr6.4:3689289-3689308 | MS.gene66993:intron | 50.0% |
| !! | GTGGTGGATGGACCATTCAA+TGG | + | chr6.4:3692117-3692136 | MS.gene66993:CDS | 50.0% |
| AATTTGCAGGGCCGTATCCG+AGG | + | chr6.4:3687406-3687425 | MS.gene66993:intron | 55.0% | |
| ACACCGGAACCTTCACTACC+AGG | - | chr6.4:3692939-3692958 | None:intergenic | 55.0% | |
| AGTTGAGGGTCCCTGCAAGT+TGG | - | chr6.4:3689848-3689867 | None:intergenic | 55.0% | |
| ATGCCCGCTCCTGCTGAAAT+CGG | + | chr6.4:3689276-3689295 | MS.gene66993:intron | 55.0% | |
| GCCCTTGAATCCAGAGCAAC+TGG | + | chr6.4:3689893-3689912 | MS.gene66993:CDS | 55.0% | |
| GGGACCCTCAACTAGTGAAG+AGG | + | chr6.4:3689855-3689874 | MS.gene66993:intron | 55.0% | |
| GTTGAGGGTCCCTGCAAGTT+GGG | - | chr6.4:3689847-3689866 | None:intergenic | 55.0% | |
| TACAGCCATGCCGATCAGCT+CGG | + | chr6.4:3691763-3691782 | MS.gene66993:CDS | 55.0% | |
| TATCCGAGGTAGGGCGAAGA+GGG | + | chr6.4:3687420-3687439 | MS.gene66993:intron | 55.0% | |
| TCTTCGCCCTACCTCGGATA+CGG | - | chr6.4:3687420-3687439 | None:intergenic | 55.0% | |
| TGTCTTTGCGCCTTGCATCG+CGG | + | chr6.4:3689925-3689944 | MS.gene66993:CDS | 55.0% | |
| TTTCAGCAGGAGCGGGCATA+TGG | - | chr6.4:3689275-3689294 | None:intergenic | 55.0% | |
| ! | GCTTGGCTTCCTGGTAGTGA+AGG | + | chr6.4:3692927-3692946 | MS.gene66993:CDS | 55.0% |
| !! | AATCGGGCACCGATTTCAGC+AGG | - | chr6.4:3689288-3689307 | None:intergenic | 55.0% |
| !! | GGGAGTGTTCTAAGTGGTGG+AGG | + | chr6.4:3688142-3688161 | MS.gene66993:intron | 55.0% |
| !! | TTGACGGACTCGTTGCTGCT+TGG | + | chr6.4:3692910-3692929 | MS.gene66993:CDS | 55.0% |
| AACCTGGCTCCCGAGCTGAT+CGG | - | chr6.4:3691776-3691795 | None:intergenic | 60.0% | |
| ACAGCCATGCCGATCAGCTC+GGG | + | chr6.4:3691764-3691783 | MS.gene66993:CDS | 60.0% | |
| GTATCCGAGGTAGGGCGAAG+AGG | + | chr6.4:3687419-3687438 | MS.gene66993:intron | 60.0% | |
| ! | CTCGTTGCTGCTTGGCTTCC+TGG | + | chr6.4:3692918-3692937 | MS.gene66993:CDS | 60.0% |
| !! | GCACCGATTTCAGCAGGAGC+GGG | - | chr6.4:3689282-3689301 | None:intergenic | 60.0% |
| !! | GGCACCGATTTCAGCAGGAG+CGG | - | chr6.4:3689283-3689302 | None:intergenic | 60.0% |
| GCAGGGCCGTATCCGAGGTA+GGG | + | chr6.4:3687411-3687430 | MS.gene66993:intron | 65.0% | |
| TCGCCCTCTTCGCCCTACCT+CGG | - | chr6.4:3687426-3687445 | None:intergenic | 65.0% | |
| TGCAGGGCCGTATCCGAGGT+AGG | + | chr6.4:3687410-3687429 | MS.gene66993:intron | 65.0% | |
| GCGAAGAGGGCGACCGCTCT+AGG | + | chr6.4:3687433-3687452 | MS.gene66993:intron | 70.0% | |
| GGCTCCCGAGCTGATCGGCA+TGG | - | chr6.4:3691771-3691790 | None:intergenic | 70.0% | |
| TGCCGATCAGCTCGGGAGCC+AGG | + | chr6.4:3691771-3691790 | MS.gene66993:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 3687000 | 3693127 | 3687000 | ID=MS.gene66993 |
| chr6.4 | mRNA | 3687000 | 3693127 | 3687000 | ID=MS.gene66993.t1;Parent=MS.gene66993 |
| chr6.4 | exon | 3687000 | 3687219 | 3687000 | ID=MS.gene66993.t1.exon1;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3687000 | 3687219 | 3687000 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3688143 | 3688347 | 3688143 | ID=MS.gene66993.t1.exon2;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3688143 | 3688347 | 3688143 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3689856 | 3689946 | 3689856 | ID=MS.gene66993.t1.exon3;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3689856 | 3689946 | 3689856 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3690166 | 3690311 | 3690166 | ID=MS.gene66993.t1.exon4;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3690166 | 3690311 | 3690166 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3690826 | 3691069 | 3690826 | ID=MS.gene66993.t1.exon5;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3690826 | 3691069 | 3690826 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3691301 | 3691405 | 3691301 | ID=MS.gene66993.t1.exon6;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3691301 | 3691405 | 3691301 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3691610 | 3691792 | 3691610 | ID=MS.gene66993.t1.exon7;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3691610 | 3691792 | 3691610 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3691966 | 3692170 | 3691966 | ID=MS.gene66993.t1.exon8;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3691966 | 3692170 | 3691966 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| chr6.4 | exon | 3692631 | 3693127 | 3692631 | ID=MS.gene66993.t1.exon9;Parent=MS.gene66993.t1 |
| chr6.4 | CDS | 3692631 | 3693127 | 3692631 | ID=cds.MS.gene66993.t1;Parent=MS.gene66993.t1 |
| Gene Sequence |
| Protein sequence |
