AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene68459

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68459.t1 MTR_3g055940 75.255 687 35 3 4 555 77 763 0.0 991
MS.gene68459.t1 MTR_5g094310 51.079 417 114 5 4 332 76 490 2.60e-110 355
MS.gene68459.t1 MTR_5g094310 51.681 238 69 6 348 547 589 818 2.74e-53 196
MS.gene68459.t1 MTR_3g084790 41.424 309 144 2 4 275 100 408 3.03e-73 254
MS.gene68459.t1 MTR_3g084790 31.933 238 114 11 338 538 603 829 6.82e-13 72.4
MS.gene68459.t1 MTR_8g080910 42.532 308 141 4 4 275 57 364 9.53e-72 249
MS.gene68459.t1 MTR_2g087840 34.603 315 152 6 4 273 90 395 1.20e-47 179
MS.gene68459.t1 MTR_4g123730 36.162 271 138 4 34 273 190 456 1.58e-45 173
MS.gene68459.t1 MTR_4g087040 33.981 309 162 7 4 273 195 500 3.44e-45 172
MS.gene68459.t1 MTR_2g096010 29.846 325 159 7 4 273 51 361 1.45e-31 130
MS.gene68459.t1 MTR_1g059730 29.720 286 145 5 32 273 57 330 1.36e-30 127
MS.gene68459.t1 MTR_7g105030 28.671 286 148 5 32 273 53 326 2.57e-30 126
MS.gene68459.t1 MTR_7g105030 28.671 286 148 5 32 273 53 326 2.57e-30 126
MS.gene68459.t1 MTR_1g484960 27.564 312 162 7 4 272 5 295 3.02e-30 126
MS.gene68459.t1 MTR_7g112420 33.455 275 132 9 31 273 314 569 7.39e-29 122
MS.gene68459.t1 MTR_7g112420 33.333 273 129 9 31 273 444 693 4.99e-28 119
MS.gene68459.t1 MTR_5g096570 33.333 270 132 9 35 273 480 732 9.12e-28 119
MS.gene68459.t1 MTR_5g025100 29.480 346 178 11 4 307 891 1212 2.02e-27 118
MS.gene68459.t1 MTR_1g017540 28.438 320 160 9 5 275 6 305 2.95e-27 117
MS.gene68459.t1 MTR_7g109130 32.727 275 134 10 31 273 139 394 5.72e-27 115
MS.gene68459.t1 MTR_7g109130 32.727 275 134 10 31 273 218 473 6.02e-27 116
MS.gene68459.t1 MTR_1g067630 26.994 326 168 8 4 273 56 367 6.79e-27 116
MS.gene68459.t1 MTR_7g109130 32.727 275 134 10 31 273 440 695 7.82e-27 116
MS.gene68459.t1 MTR_7g113520 32.234 273 132 8 33 273 170 421 1.63e-26 114
MS.gene68459.t1 MTR_1g087880 32.000 275 136 10 31 273 436 691 3.83e-26 114
MS.gene68459.t1 MTR_2g069950 32.601 273 128 10 35 273 385 635 7.58e-26 113
MS.gene68459.t1 MTR_4g071210 27.974 311 160 11 5 275 92 378 1.35e-25 112
MS.gene68459.t1 MTR_4g071210 27.974 311 160 11 5 275 92 378 1.38e-25 112
MS.gene68459.t1 MTR_8g072430 27.457 346 185 10 4 307 877 1198 1.46e-25 112
MS.gene68459.t1 MTR_7g109130 32.014 278 135 10 31 273 440 698 1.53e-25 112
MS.gene68459.t1 MTR_3g100270 26.481 287 157 5 30 273 43 318 2.95e-25 111
MS.gene68459.t1 MTR_5g031470 32.342 269 131 8 35 273 444 691 3.03e-25 111
MS.gene68459.t1 MTR_1g082920 32.042 284 135 9 23 273 183 441 5.92e-25 110
MS.gene68459.t1 MTR_5g066320 27.178 287 156 6 30 273 51 327 8.13e-25 110
MS.gene68459.t1 MTR_5g049820 31.970 269 132 8 35 273 419 666 1.35e-24 108
MS.gene68459.t1 MTR_3g117330 27.184 309 165 10 5 275 102 388 1.41e-24 109
MS.gene68459.t1 MTR_5g049620 31.970 269 132 8 35 273 419 666 1.42e-24 108
MS.gene68459.t1 MTR_8g098230 29.076 368 185 12 4 312 485 835 2.00e-24 108
MS.gene68459.t1 MTR_3g060900 31.716 268 131 9 35 273 484 728 2.36e-24 108
MS.gene68459.t1 MTR_2g010760 30.476 315 157 11 4 273 437 734 3.68e-24 107
MS.gene68459.t1 MTR_2g082570 30.091 329 152 11 4 273 401 710 5.32e-23 103
MS.gene68459.t1 MTR_5g021650 27.245 323 152 9 4 273 22 314 8.21e-23 103
MS.gene68459.t1 MTR_4g081390 31.000 300 143 8 35 291 479 757 1.50e-22 102
MS.gene68459.t1 MTR_8g098230 28.191 376 186 12 4 312 485 843 1.76e-22 102
MS.gene68459.t1 MTR_3g102170 26.786 336 168 12 4 273 10 333 2.73e-22 102
MS.gene68459.t1 MTR_1g083770 31.387 274 134 9 35 273 454 708 6.26e-22 100
MS.gene68459.t1 MTR_7g091290 28.617 311 163 12 4 273 394 686 2.08e-21 99.4
MS.gene68459.t1 MTR_4g124650 28.797 316 150 10 4 273 145 431 3.33e-21 98.6
MS.gene68459.t1 MTR_8g076190 28.000 325 152 10 5 273 22 320 5.16e-21 98.2
MS.gene68459.t1 MTR_4g094882 25.000 340 173 9 4 273 14 341 7.16e-21 97.4
MS.gene68459.t1 MTR_8g471180 32.117 274 137 10 26 273 180 430 8.30e-21 97.4
MS.gene68459.t1 MTR_8g104200 28.481 316 162 9 4 273 517 814 9.35e-21 97.4
MS.gene68459.t1 MTR_8g076190 27.414 321 152 9 5 273 22 313 1.38e-20 96.7
MS.gene68459.t1 MTR_8g076190 26.625 323 156 8 5 275 22 315 1.71e-20 96.3
MS.gene68459.t1 MTR_7g093720 26.518 313 164 10 5 275 76 364 2.31e-20 95.9
MS.gene68459.t1 MTR_6g084490 27.945 365 182 15 4 309 479 821 2.66e-20 95.5
MS.gene68459.t1 MTR_4g081390 30.292 274 130 7 35 265 481 736 5.56e-20 94.4
MS.gene68459.t1 MTR_4g092140 27.607 326 163 12 4 273 319 627 5.60e-20 94.4
MS.gene68459.t1 MTR_5g011500 26.562 320 155 11 7 275 82 372 1.29e-19 93.6
MS.gene68459.t1 MTR_3g113110 26.852 324 153 9 5 275 22 314 3.57e-19 92.4
MS.gene68459.t1 MTR_6g082470 27.586 319 152 9 5 273 33 322 1.05e-18 90.5
MS.gene68459.t1 MTR_1g081800 27.640 322 155 10 4 274 90 384 1.31e-18 89.7
MS.gene68459.t1 MTR_4g071900 26.019 319 157 10 5 273 27 316 9.94e-18 87.4
MS.gene68459.t1 MTR_2g082570 36.478 159 73 7 4 147 401 546 4.74e-17 85.1
MS.gene68459.t1 MTR_2g055910 27.206 272 145 9 30 270 114 363 1.30e-16 83.6
MS.gene68459.t1 MTR_4g112350 26.740 273 146 9 30 270 171 421 2.36e-16 82.8
MS.gene68459.t1 MTR_1g018940 34.132 167 88 8 4 163 10 161 1.53e-14 77.4
MS.gene68459.t1 MTR_7g061020 23.985 271 152 5 33 273 77 323 7.83e-13 71.6
MS.gene68459.t1 MTR_7g075060 28.682 129 77 2 35 163 98 211 3.81e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene68459.t1 AT3G20150 44.162 394 131 5 4 311 106 496 6.87e-94 309
MS.gene68459.t1 AT3G20150 36.404 228 102 9 336 549 609 807 2.86e-22 102
MS.gene68459.t1 AT3G20150 44.162 394 131 5 4 311 106 496 1.19e-93 310
MS.gene68459.t1 AT3G20150 36.404 228 102 9 336 549 609 807 2.84e-22 102
MS.gene68459.t1 AT4G14150 43.137 306 140 2 4 275 93 398 1.46e-75 261
MS.gene68459.t1 AT4G14150 28.226 248 132 7 332 538 654 896 3.54e-14 76.6
MS.gene68459.t1 AT3G23670 41.503 306 145 2 4 275 98 403 3.34e-74 254
MS.gene68459.t1 AT3G23670 41.503 306 145 2 4 275 98 403 1.57e-73 255
MS.gene68459.t1 AT3G23670 27.907 258 141 8 324 538 651 906 6.50e-16 82.0
MS.gene68459.t1 AT3G44050 34.286 315 153 6 4 273 95 400 2.64e-45 172
MS.gene68459.t1 AT3G17360 33.333 309 164 5 4 273 170 475 4.28e-45 172
MS.gene68459.t1 AT3G17360 33.333 309 164 5 4 273 170 475 4.37e-45 172
MS.gene68459.t1 AT3G17360 33.333 309 164 5 4 273 170 475 4.53e-45 172
MS.gene68459.t1 AT3G19050 34.505 313 155 9 4 273 195 500 1.86e-44 170
MS.gene68459.t1 AT2G28620 31.173 324 156 7 4 273 52 362 5.22e-34 138
MS.gene68459.t1 AT2G28620 31.173 324 156 7 4 273 52 362 5.22e-34 138
MS.gene68459.t1 AT2G28620 31.173 324 156 7 4 273 52 362 5.61e-34 138
MS.gene68459.t1 AT3G45850 29.231 325 161 8 4 273 57 367 5.01e-32 132
MS.gene68459.t1 AT3G45850 29.231 325 161 8 4 273 57 367 5.01e-32 132
MS.gene68459.t1 AT2G36200 29.371 286 146 5 32 273 56 329 1.69e-30 127
MS.gene68459.t1 AT2G36200 29.371 286 146 5 32 273 56 329 3.07e-30 126
MS.gene68459.t1 AT5G65930 32.051 312 148 12 4 273 896 1185 8.95e-30 125
MS.gene68459.t1 AT5G27000 32.278 316 148 10 4 273 396 691 9.48e-30 125
MS.gene68459.t1 AT5G65930 32.051 312 148 12 4 273 890 1179 1.03e-29 125
MS.gene68459.t1 AT5G65930 32.051 312 148 12 4 273 889 1178 1.07e-29 125
MS.gene68459.t1 AT3G63480 28.165 316 167 11 5 275 6 306 1.11e-28 119
MS.gene68459.t1 AT1G59540 28.571 308 163 8 5 273 6 295 1.23e-28 121
MS.gene68459.t1 AT2G22610 33.829 269 127 8 35 273 462 709 3.05e-28 120
MS.gene68459.t1 AT2G22610 33.829 269 127 8 35 273 463 710 3.11e-28 120
MS.gene68459.t1 AT2G22610 33.829 269 127 8 35 273 462 709 3.24e-28 120
MS.gene68459.t1 AT3G63480 27.187 320 169 11 5 275 6 310 5.50e-28 117
MS.gene68459.t1 AT1G72250 31.868 273 131 7 35 273 536 787 4.78e-27 117
MS.gene68459.t1 AT1G72250 31.868 273 131 7 35 273 545 796 5.11e-27 117
MS.gene68459.t1 AT1G72250 31.868 273 131 7 35 273 556 807 5.13e-27 117
MS.gene68459.t1 AT1G72250 31.868 273 131 7 35 273 557 808 5.27e-27 116
MS.gene68459.t1 AT1G09170 33.455 275 132 10 31 273 475 730 1.17e-26 115
MS.gene68459.t1 AT1G09170 33.455 275 132 10 31 273 475 730 1.56e-26 115
MS.gene68459.t1 AT1G09170 33.455 275 132 10 31 273 475 730 1.79e-26 114
MS.gene68459.t1 AT1G09170 33.455 275 132 10 31 273 475 730 1.98e-26 114
MS.gene68459.t1 AT1G09170 33.455 275 132 10 31 273 475 730 1.98e-26 114
MS.gene68459.t1 AT2G37420 26.855 283 152 5 32 273 92 360 3.39e-26 114
MS.gene68459.t1 AT2G37420 26.855 283 152 5 32 273 92 360 3.39e-26 114
MS.gene68459.t1 AT5G54670 32.014 278 133 7 35 273 383 643 9.78e-26 112
MS.gene68459.t1 AT5G54670 30.341 323 155 9 4 273 398 703 1.03e-25 112
MS.gene68459.t1 AT5G54670 30.341 323 155 9 4 273 398 703 1.03e-25 112
MS.gene68459.t1 AT3G10180 27.796 313 161 9 4 272 5 296 1.51e-25 112
MS.gene68459.t1 AT3G10180 27.796 313 161 9 4 272 5 296 1.52e-25 112
MS.gene68459.t1 AT1G73860 29.235 366 182 11 4 309 511 859 1.80e-25 112
MS.gene68459.t1 AT1G73860 29.235 366 182 11 4 309 428 776 3.31e-25 110
MS.gene68459.t1 AT2G47500 32.103 271 133 10 35 273 443 694 4.87e-25 110
MS.gene68459.t1 AT2G47500 32.103 271 133 10 35 273 443 694 5.31e-25 110
MS.gene68459.t1 AT4G27180 32.374 278 132 10 35 273 434 694 6.89e-25 109
MS.gene68459.t1 AT4G27180 32.374 278 132 10 35 273 434 694 6.89e-25 109
MS.gene68459.t1 AT5G27550 32.601 273 131 8 33 273 175 426 7.97e-25 109
MS.gene68459.t1 AT5G27550 32.601 273 131 8 33 273 175 426 7.97e-25 109
MS.gene68459.t1 AT4G39050 28.803 309 160 10 5 275 101 387 1.01e-24 109
MS.gene68459.t1 AT1G09170 32.841 271 131 10 31 269 475 726 1.31e-24 108
MS.gene68459.t1 AT1G09170 32.841 271 131 10 31 269 475 726 1.31e-24 108
MS.gene68459.t1 AT5G47820 26.608 342 165 13 4 273 13 340 1.83e-24 108
MS.gene68459.t1 AT5G47820 26.608 342 165 13 4 273 13 340 1.83e-24 108
MS.gene68459.t1 AT5G55520 32.486 354 141 13 253 530 107 438 2.63e-24 108
MS.gene68459.t1 AT2G21380 28.479 309 161 11 5 275 107 393 2.78e-24 108
MS.gene68459.t1 AT2G21380 28.479 309 161 11 5 275 107 393 2.78e-24 108
MS.gene68459.t1 AT5G55520 32.486 354 141 13 253 530 107 438 2.92e-24 107
MS.gene68459.t1 AT1G18410 29.412 323 163 10 34 309 534 838 9.63e-24 106
MS.gene68459.t1 AT1G18410 29.412 323 163 10 34 309 534 838 9.63e-24 106
MS.gene68459.t1 AT5G41310 31.746 252 142 7 35 273 468 702 1.21e-23 106
MS.gene68459.t1 AT1G18410 29.412 323 163 10 34 309 677 981 1.28e-23 106
MS.gene68459.t1 AT1G18410 29.206 315 166 9 34 309 677 973 1.51e-23 105
MS.gene68459.t1 AT3G10310 29.073 313 161 10 4 273 365 659 2.30e-23 105
MS.gene68459.t1 AT3G10310 29.073 313 161 10 4 273 365 659 2.58e-23 105
MS.gene68459.t1 AT1G18410 28.981 314 166 9 34 308 524 819 3.59e-23 104
MS.gene68459.t1 AT1G21730 27.532 316 157 10 5 275 78 366 4.72e-23 104
MS.gene68459.t1 AT5G27950 29.787 282 135 8 33 274 117 375 5.56e-23 103
MS.gene68459.t1 AT1G63640 29.889 271 133 8 35 273 518 763 5.95e-23 103
MS.gene68459.t1 AT1G55550 29.091 275 136 7 35 273 130 381 6.16e-23 103
MS.gene68459.t1 AT4G05190 29.358 327 157 12 4 273 430 739 6.54e-23 103
MS.gene68459.t1 AT4G05190 29.358 327 157 12 4 273 417 726 6.74e-23 103
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 7.64e-23 103
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 7.64e-23 103
MS.gene68459.t1 AT4G26660 41.414 198 105 6 332 528 274 461 9.17e-23 103
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 1.03e-22 102
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 1.03e-22 102
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 1.03e-22 102
MS.gene68459.t1 AT5G06670 27.839 273 143 7 35 275 107 357 1.05e-22 102
MS.gene68459.t1 AT1G63640 30.292 274 135 9 35 273 518 770 1.12e-22 103
MS.gene68459.t1 AT1G63640 30.292 274 135 9 35 273 518 770 1.14e-22 103
MS.gene68459.t1 AT1G63640 30.292 274 135 9 35 273 518 770 1.14e-22 103
MS.gene68459.t1 AT1G63640 30.292 274 135 9 35 273 508 760 1.14e-22 103
MS.gene68459.t1 AT3G44730 31.852 270 136 10 35 273 468 720 2.94e-22 102
MS.gene68459.t1 AT3G44730 31.852 270 136 10 35 273 468 720 2.94e-22 102
MS.gene68459.t1 AT3G44730 31.852 270 136 10 35 273 423 675 3.03e-22 102
MS.gene68459.t1 AT3G44730 31.852 270 136 10 35 273 423 675 3.03e-22 102
MS.gene68459.t1 AT4G21270 30.851 282 135 11 35 273 478 742 4.78e-22 100
MS.gene68459.t1 AT2G21300 26.398 322 156 10 5 275 27 318 2.24e-21 99.0
MS.gene68459.t1 AT2G21300 26.398 322 156 10 5 275 27 318 2.24e-21 99.0
MS.gene68459.t1 AT2G21300 26.398 322 156 10 5 275 27 318 2.24e-21 99.0
MS.gene68459.t1 AT2G21300 26.398 322 156 10 5 275 27 318 2.24e-21 99.0
MS.gene68459.t1 AT2G21300 26.398 322 156 10 5 275 27 318 2.24e-21 99.0
MS.gene68459.t1 AT3G12020 27.473 273 144 7 35 275 110 360 3.56e-21 98.6
MS.gene68459.t1 AT3G12020 27.473 273 144 7 35 275 110 360 3.56e-21 98.6
MS.gene68459.t1 AT3G12020 27.106 273 145 7 35 275 110 360 5.59e-21 97.8
MS.gene68459.t1 AT3G12020 27.106 273 145 7 35 275 110 360 5.59e-21 97.8
MS.gene68459.t1 AT5G60930 24.834 302 158 6 30 273 40 330 7.68e-21 97.8
MS.gene68459.t1 AT5G60930 24.834 302 158 6 30 273 40 330 8.19e-21 97.4
MS.gene68459.t1 AT5G60930 24.834 302 158 6 30 273 40 330 9.52e-21 97.4
MS.gene68459.t1 AT5G06670 26.950 282 143 8 35 275 107 366 1.39e-20 96.7
MS.gene68459.t1 AT5G06670 26.950 282 143 8 35 275 107 366 1.39e-20 96.7
MS.gene68459.t1 AT3G54870 26.224 286 148 6 33 275 148 413 1.71e-20 96.3
MS.gene68459.t1 AT3G54870 26.224 286 148 6 33 275 148 413 1.73e-20 96.3
MS.gene68459.t1 AT3G54870 26.224 286 148 6 33 275 148 413 1.82e-20 96.3
MS.gene68459.t1 AT4G38950 26.398 322 156 10 5 275 16 307 6.45e-20 94.4
MS.gene68459.t1 AT4G38950 26.398 322 156 10 5 275 16 307 6.45e-20 94.4
MS.gene68459.t1 AT4G38950 26.398 322 156 10 5 275 16 307 6.45e-20 94.4
MS.gene68459.t1 AT4G38950 26.398 322 156 10 5 275 16 307 6.45e-20 94.4
MS.gene68459.t1 AT4G38950 26.398 322 156 10 5 275 16 307 6.45e-20 94.4
MS.gene68459.t1 AT1G18370 28.125 320 153 10 5 275 34 325 1.27e-19 93.6
MS.gene68459.t1 AT3G50240 25.658 304 154 9 30 273 59 350 1.49e-19 93.2
MS.gene68459.t1 AT5G10470 30.742 283 133 8 24 273 174 426 1.94e-19 93.2
MS.gene68459.t1 AT5G10470 30.742 283 133 8 24 273 174 426 2.25e-19 92.8
MS.gene68459.t1 AT3G50240 25.658 304 154 9 30 273 59 350 2.69e-19 92.8
MS.gene68459.t1 AT3G50240 25.658 304 154 9 30 273 59 350 2.78e-19 92.4
MS.gene68459.t1 AT5G65460 29.393 313 148 11 4 273 140 422 5.50e-19 91.7
MS.gene68459.t1 AT5G65460 29.393 313 148 11 4 273 140 422 5.73e-19 91.7
MS.gene68459.t1 AT5G65460 29.712 313 154 11 4 273 140 429 5.80e-19 91.7
MS.gene68459.t1 AT5G65460 29.393 313 148 11 4 273 140 422 5.99e-19 91.7
MS.gene68459.t1 AT5G65460 29.393 313 148 11 4 273 140 422 6.95e-19 91.3
MS.gene68459.t1 AT3G43210 27.157 313 158 9 5 273 32 318 1.18e-18 90.5
MS.gene68459.t1 AT3G43210 27.157 313 158 9 5 273 32 318 1.18e-18 90.5
MS.gene68459.t1 AT3G43210 27.157 313 158 9 5 273 32 318 1.18e-18 90.5
MS.gene68459.t1 AT3G43210 27.157 313 158 9 5 273 32 318 1.18e-18 90.5
MS.gene68459.t1 AT3G43210 27.157 313 158 9 5 273 32 318 1.18e-18 90.5
MS.gene68459.t1 AT1G18550 27.509 269 142 9 34 271 203 449 7.09e-18 87.8
MS.gene68459.t1 AT3G49650 25.926 270 155 6 32 273 63 315 9.81e-18 87.4
MS.gene68459.t1 AT5G66310 26.374 273 140 5 35 273 67 312 5.99e-17 85.1
MS.gene68459.t1 AT5G66310 26.374 273 140 5 35 273 67 312 5.99e-17 85.1
MS.gene68459.t1 AT5G66310 26.374 273 140 5 35 273 67 312 5.99e-17 85.1
MS.gene68459.t1 AT1G01950 24.399 291 152 8 33 275 104 374 2.13e-15 80.1
MS.gene68459.t1 AT1G01950 24.399 291 152 8 33 275 104 374 2.45e-15 80.1
MS.gene68459.t1 AT1G01950 24.399 291 152 8 33 275 104 374 2.68e-15 79.7
MS.gene68459.t1 AT1G12430 32.558 129 72 3 35 163 116 229 3.91e-15 79.3
MS.gene68459.t1 AT1G12430 32.558 129 72 3 35 163 116 229 3.97e-15 79.3
MS.gene68459.t1 AT1G59540 28.571 203 106 5 102 273 9 203 8.65e-15 78.2
MS.gene68459.t1 AT5G02370 24.922 321 160 12 4 273 22 312 1.22e-14 77.4
MS.gene68459.t1 AT5G42490 27.615 239 119 6 35 241 56 272 2.18e-12 70.5
MS.gene68459.t1 AT5G42490 27.615 239 119 6 35 241 56 272 2.47e-12 70.5

Find 108 sgRNAs with CRISPR-Local

Find 322 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTGGTTATTTCTGAATTT+TGG 0.100925 3.4:+52607754 None:intergenic
GGTTCAACCTTGTCGATTTC+TGG 0.115382 3.4:+52607472 None:intergenic
ATTTATAGCTGAACTGTTTC+TGG 0.221580 3.4:+52610422 None:intergenic
TTTCTGAGAGTTCAACTTTC+GGG 0.228286 3.4:-52607684 MS.gene68459:CDS
AGCTGACTTTCAACTGATTA+AGG 0.233603 3.4:+52608070 None:intergenic
ACCTCAAGGTCCTGCTGATT+TGG 0.256260 3.4:+52610234 None:intergenic
CTTCTGATGGTTTGTGTGTT+GGG 0.261856 3.4:-52612200 MS.gene68459:CDS
CAGATATACAACGATCAAAT+TGG 0.262101 3.4:-52610270 MS.gene68459:CDS
TTGGTTCGAAACGCTTTAAC+TGG 0.284880 3.4:-52610841 MS.gene68459:CDS
ATTGATCTTGCCGGATTAGA+TGG 0.288031 3.4:-52609577 MS.gene68459:CDS
ATGGGAGCAGCCAATGTCTA+TGG 0.300690 3.4:-52609540 MS.gene68459:CDS
ATCAGCCTTATTGATCTTGC+CGG 0.327098 3.4:-52609586 MS.gene68459:CDS
TTTAGGAAAATCGTTTAAAC+GGG 0.346892 3.4:-52607653 MS.gene68459:CDS
AACTCTGGTCCATCAAATAT+TGG 0.354061 3.4:+52607787 None:intergenic
TTGTAACAATCGAGTTAAAC+TGG 0.357528 3.4:+52608832 None:intergenic
TAAAGCATTTGGAAAATGTA+AGG 0.361800 3.4:-52607273 MS.gene68459:intron
CGAGCTCCGTCTCTCTCATT+TGG 0.387224 3.4:+52607242 None:intergenic
GTTTCTGAGAGTTCAACTTT+CGG 0.389009 3.4:-52607685 MS.gene68459:CDS
TTATCTATCTACTACCTGAT+TGG 0.390828 3.4:+52612137 None:intergenic
TCATAACAACCCACATGTTA+AGG 0.397327 3.4:-52612368 None:intergenic
GTGATGTTCATAGCTCAGTT+GGG 0.402377 3.4:-52608134 MS.gene68459:CDS
TCTTCTGATGGTTTGTGTGT+TGG 0.402708 3.4:-52612201 MS.gene68459:CDS
CGTCGCACAAGTTCTGATTA+AGG 0.414956 3.4:-52610029 MS.gene68459:intron
GGGTGATTTGTTGGTTAAGA+AGG 0.415620 3.4:-52612226 MS.gene68459:CDS
GTTAAGAAGGTTTCTTCTGA+TGG 0.419114 3.4:-52612213 MS.gene68459:CDS
GAGCTTGAAGATTTGTTCAA+TGG 0.421344 3.4:+52607529 None:intergenic
CATCGAGTTATCTAGGAAGT+AGG 0.421838 3.4:-52607714 MS.gene68459:CDS
CTAATCCGGCAAGATCAATA+AGG 0.430423 3.4:+52609581 None:intergenic
AACACTTCAATTCTGTCATA+TGG 0.433934 3.4:-52610814 MS.gene68459:CDS
AGCAAATCTCCAATATTTGA+TGG 0.437239 3.4:-52607796 MS.gene68459:CDS
TCCCTCGTGTGATAGTCAAC+AGG 0.437969 3.4:-52610605 MS.gene68459:CDS
ACCCTCATCAAACACAGAAA+TGG 0.438437 3.4:+52607059 None:intergenic
AACACTATCCCCATCTAATC+CGG 0.449078 3.4:+52609567 None:intergenic
AGATATACAACGATCAAATT+GGG 0.451551 3.4:-52610269 MS.gene68459:CDS
AATTGAGCAACTAAATCAAT+TGG 0.453297 3.4:-52607191 MS.gene68459:intron
GTCAGGCAAAGCTGAGTCCT+TGG 0.461680 3.4:-52607605 MS.gene68459:CDS
TTGATCTTGCCGGATTAGAT+GGG 0.466897 3.4:-52609576 MS.gene68459:CDS
TGTTGTATTGTTTGATCACA+AGG 0.468992 3.4:+52607451 None:intergenic
AGAAATCGTTATCTCAGCTT+GGG 0.470181 3.4:-52609501 MS.gene68459:intron
CAATTATCTGTAATCCCCTC+TGG 0.473650 3.4:+52607572 None:intergenic
GGTGATGTTCATAGCTCAGT+TGG 0.475982 3.4:-52608135 MS.gene68459:CDS
TAAACTATTGAAACCCTTCG+TGG 0.476767 3.4:+52609621 None:intergenic
TTATGTTGAGAATCTGATAG+AGG 0.479006 3.4:-52610074 MS.gene68459:CDS
TTTCCCGCACGTTATGTCCT+TGG 0.482261 3.4:+52608094 None:intergenic
CAAGCTCAGAAAATAACATT+CGG 0.484978 3.4:+52610563 None:intergenic
GGAGCTCGAGAGTGTTTGTA+AGG 0.486038 3.4:-52607227 MS.gene68459:CDS
TTCTGATGGTTTGTGTGTTG+GGG 0.494626 3.4:-52612199 MS.gene68459:CDS
GACATGGTGTCAAAGTTAAA+CGG 0.496052 3.4:+52607494 None:intergenic
AAGAAATCGTTATCTCAGCT+TGG 0.499497 3.4:-52609502 MS.gene68459:CDS
TCAGTCGGTTGGTGTCCCCT+TGG 0.507694 3.4:-52610860 MS.gene68459:CDS
AGTTAAACGGCCAAAAGAAA+AGG 0.508279 3.4:+52607507 None:intergenic
CGGAAAGACTTATACAATGT+GGG 0.523031 3.4:-52610653 MS.gene68459:CDS
TTCAATTCTGTCATATGGCC+AGG 0.525620 3.4:-52610809 MS.gene68459:intron
GGTAAGAATGGATGCTTCCA+AGG 0.537666 3.4:-52608111 MS.gene68459:CDS
TTTGGAGACTCGGACAACTC+TGG 0.538030 3.4:+52607772 None:intergenic
TGATGTTCATAGCTCAGTTG+GGG 0.539922 3.4:-52608133 MS.gene68459:CDS
TTTACTCAATCCAAATCAGC+AGG 0.542178 3.4:-52610244 MS.gene68459:CDS
ACCTTGTCGATTTCTGGACA+TGG 0.542707 3.4:+52607478 None:intergenic
GGATCCTCAGTCATGGCACT+TGG 0.543595 3.4:+52610625 None:intergenic
ATTCTTCAGGGCACCACGAA+GGG 0.547805 3.4:-52609634 MS.gene68459:intron
AAAGCATTTGGAAAATGTAA+GGG 0.551141 3.4:-52607272 MS.gene68459:intron
GATGGGGATAGTGTTGACAA+TGG 0.551659 3.4:-52609559 MS.gene68459:CDS
ATGGGGATAGTGTTGACAAT+GGG 0.551843 3.4:-52609558 MS.gene68459:CDS
CTCCATTTCTGTGTTTGATG+AGG 0.554459 3.4:-52607061 MS.gene68459:CDS
TGTTCAATGGCGAGTTCTGT+TGG 0.555174 3.4:+52607542 None:intergenic
GGAAGAACTTATTAGAGTGA+AGG 0.555532 3.4:-52608160 MS.gene68459:CDS
CTCCATGAAGGATGAAAACA+AGG 0.562147 3.4:-52607025 None:intergenic
ATGCAAACTTCATTACAGTC+AGG 0.562909 3.4:-52607622 MS.gene68459:CDS
TGGGAGCAGCCAATGTCTAT+GGG 0.563435 3.4:-52609539 MS.gene68459:CDS
GTTAAAGCGTTTCGAACCAA+GGG 0.567299 3.4:+52610844 None:intergenic
CTCCAGGTGGAGAAATTGAA+AGG 0.568982 3.4:-52607099 MS.gene68459:intron
TCCATTTCTGTGTTTGATGA+GGG 0.573702 3.4:-52607060 MS.gene68459:CDS
CTTCTGTACTAGTCTGGAAG+CGG 0.582733 3.4:-52610673 MS.gene68459:intron
GTCAACAGGGAATTGTTCCT+CGG 0.585977 3.4:-52610591 MS.gene68459:CDS
AGTTAAAGCGTTTCGAACCA+AGG 0.588146 3.4:+52610843 None:intergenic
ATAGGTGAAGAAAATTCTGT+TGG 0.592812 3.4:-52607844 MS.gene68459:CDS
AAAAGACCAAATGAGAGAGA+CGG 0.594496 3.4:-52607248 MS.gene68459:CDS
TCCAAATCAGCAGGACCTTG+AGG 0.595569 3.4:-52610235 MS.gene68459:intron
TTGTTACAAGAATCACTTGG+TGG 0.595622 3.4:-52608818 MS.gene68459:CDS
GAACTTATTAGAGTGAAGGC+TGG 0.596868 3.4:-52608156 MS.gene68459:CDS
TGATCTTGCCGGATTAGATG+GGG 0.601332 3.4:-52609575 MS.gene68459:CDS
ACAAGATGCACAAAGGAATG+TGG 0.609754 3.4:+52607402 None:intergenic
CGATTGTTACAAGAATCACT+TGG 0.614918 3.4:-52608821 MS.gene68459:CDS
GCGGAAAGACTTATACAATG+TGG 0.623538 3.4:-52610654 MS.gene68459:CDS
TGAAGAGTATAGCTCCATGA+AGG 0.629242 3.4:-52607037 MS.gene68459:CDS
CAAAATTCAGAAATAACCAA+AGG 0.631238 3.4:-52607753 MS.gene68459:CDS
CCTCTGGAGACTTTCTGCCA+AGG 0.632708 3.4:+52607588 None:intergenic
GATTCTTCAGGGCACCACGA+AGG 0.634768 3.4:-52609635 MS.gene68459:intron
CCCTCGTGTGATAGTCAACA+GGG 0.636188 3.4:-52610604 MS.gene68459:CDS
CTTGGCAGAAAGTCTCCAGA+GGG 0.636705 3.4:-52607587 MS.gene68459:CDS
CTTCCAAGGACATAACGTGC+GGG 0.638697 3.4:-52608097 MS.gene68459:CDS
AATAACATTCGGAAGATCCG+AGG 0.643616 3.4:+52610574 None:intergenic
TATGATGCAGACACAACCAT+AGG 0.644978 3.4:-52607862 MS.gene68459:CDS
ACACGAGGGATCCTCAGTCA+TGG 0.656513 3.4:+52610618 None:intergenic
AAATAACCAAAGGAAAAGTG+TGG 0.656978 3.4:-52607743 MS.gene68459:CDS
CTGTACGACAAGATGCACAA+AGG 0.663712 3.4:+52607395 None:intergenic
GCTTCCAAGGACATAACGTG+CGG 0.669722 3.4:-52608098 MS.gene68459:CDS
TACGCCAAGTGCCATGACTG+AGG 0.672859 3.4:-52610629 MS.gene68459:CDS
CCTTGGCAGAAAGTCTCCAG+AGG 0.681962 3.4:-52607588 MS.gene68459:CDS
GGAAAGACTTATACAATGTG+GGG 0.683420 3.4:-52610652 MS.gene68459:CDS
TTAGGAAAATCGTTTAAACG+GGG 0.688251 3.4:-52607652 MS.gene68459:CDS
CCCTGTTGACTATCACACGA+GGG 0.700877 3.4:+52610604 None:intergenic
TCCCTGTTGACTATCACACG+AGG 0.707680 3.4:+52610603 None:intergenic
TTACCTCAAGAAAAGAACAA+CGG 0.710165 3.4:+52610398 None:intergenic
TTAAAGCGTTTCGAACCAAG+GGG 0.720222 3.4:+52610845 None:intergenic
ACCATGTCCAGAAATCGACA+AGG 0.737578 3.4:-52607479 MS.gene68459:CDS
GATGTTCATAGCTCAGTTGG+GGG 0.737934 3.4:-52608132 MS.gene68459:CDS
TTGGCAGAAAGTCTCCAGAG+GGG 0.789827 3.4:-52607586 MS.gene68459:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTATTTCTATAACAA+TGG - chr3.4:52609988-52610007 MS.gene68459:intron 10.0%
!! AAGATAGTTATAAAAAAGAA+AGG + chr3.4:52610642-52610661 None:intergenic 15.0%
!! AATTATTAATGTAATAAACG+AGG - chr3.4:52611086-52611105 MS.gene68459:intron 15.0%
!! ACTAAAGTAATAAATCAAAT+GGG - chr3.4:52607653-52607672 MS.gene68459:CDS 15.0%
!! AGAAAAATGTTACAAATATA+TGG + chr3.4:52610344-52610363 None:intergenic 15.0%
!! ATAAGAAAATATATCATTAC+AGG - chr3.4:52608007-52608026 MS.gene68459:intron 15.0%
!! ATTAAAGTCATAAATCAAAT+GGG - chr3.4:52608048-52608067 MS.gene68459:intron 15.0%
!! GTAGAATTGTTATAAAAATA+TGG + chr3.4:52609660-52609679 None:intergenic 15.0%
!! TAAGAAAATATATCATTACA+GGG - chr3.4:52608008-52608027 MS.gene68459:intron 15.0%
!! TATATTAAACAAAAAAACGA+AGG + chr3.4:52609493-52609512 None:intergenic 15.0%
!! TCGTTTATTACATTAATAAT+TGG + chr3.4:52611087-52611106 None:intergenic 15.0%
!!! AAGTATCTATTAATTTGTAA+AGG - chr3.4:52610845-52610864 MS.gene68459:CDS 15.0%
!!! GTTTTTTTATAAGCTATATT+TGG - chr3.4:52610810-52610829 MS.gene68459:CDS 15.0%
!!! TTAATTGAAACAGTTTTATA+AGG - chr3.4:52611161-52611180 MS.gene68459:intron 15.0%
!! ATAGTTATAAAAAAGAAAGG+AGG + chr3.4:52610639-52610658 None:intergenic 20.0%
!! ATTAGATGTATCTTAAGATA+TGG - chr3.4:52608241-52608260 MS.gene68459:intron 20.0%
!! CTAAAGTAATAAATCAAATG+GGG - chr3.4:52607654-52607673 MS.gene68459:CDS 20.0%
!! CTATTGTTTACATGAAAAAT+GGG + chr3.4:52607980-52607999 None:intergenic 20.0%
!! GACTAAAGTAATAAATCAAA+TGG - chr3.4:52607652-52607671 MS.gene68459:CDS 20.0%
!! GATTAAAGTCATAAATCAAA+TGG - chr3.4:52608047-52608066 MS.gene68459:intron 20.0%
!! TACAAAACAAGGAAAAAAAA+AGG + chr3.4:52609089-52609108 None:intergenic 20.0%
!! TATTATTATCTAAGTTAGAC+AGG + chr3.4:52611352-52611371 None:intergenic 20.0%
!! TCTAACTTAGATAATAATAC+TGG - chr3.4:52611353-52611372 MS.gene68459:intron 20.0%
!! TCTTATTGTAAATCATAAGT+TGG - chr3.4:52607939-52607958 MS.gene68459:intron 20.0%
!! TTAAAGTCATAAATCAAATG+GGG - chr3.4:52608049-52608068 MS.gene68459:intron 20.0%
!! TTACAAATAGAAAACAATCA+AGG + chr3.4:52610438-52610457 None:intergenic 20.0%
!! TTTACTAAATTTCTGCATTA+TGG - chr3.4:52608878-52608897 MS.gene68459:CDS 20.0%
!!! AATAAGTCATTTGACTTATT+TGG - chr3.4:52608319-52608338 MS.gene68459:intron 20.0%
!!! ACAAATTGGTAGTAATTATA+AGG - chr3.4:52610778-52610797 MS.gene68459:intron 20.0%
!!! ATTAAGTTGAAACATACTTT+TGG + chr3.4:52612028-52612047 None:intergenic 20.0%
!!! CAAATTGGTAGTAATTATAA+GGG - chr3.4:52610779-52610798 MS.gene68459:intron 20.0%
!!! TTTTAGGAAAATCGTTTAAA+CGG - chr3.4:52611726-52611745 MS.gene68459:intron 20.0%
! AAATTAGATAGTTCATGTGA+AGG - chr3.4:52611432-52611451 MS.gene68459:intron 25.0%
! AATTAGATAGTTCATGTGAA+GGG - chr3.4:52611433-52611452 MS.gene68459:intron 25.0%
! AATTGAGCAACTAAATCAAT+TGG - chr3.4:52612189-52612208 MS.gene68459:CDS 25.0%
! AGATATACAACGATCAAATT+GGG - chr3.4:52609111-52609130 MS.gene68459:intron 25.0%
! AGCTTATGAAAACAACTTAT+AGG + chr3.4:52610045-52610064 None:intergenic 25.0%
! ATATATCAGCTAACATAAAC+AGG + chr3.4:52609446-52609465 None:intergenic 25.0%
! ATGGTTATGATGCTAAATAT+GGG - chr3.4:52609711-52609730 MS.gene68459:intron 25.0%
! ATGTGGTAGAAGATATAAAT+AGG + chr3.4:52610227-52610246 None:intergenic 25.0%
! ATTATACATGATTTGAGTGA+AGG - chr3.4:52607864-52607883 MS.gene68459:CDS 25.0%
! ATTCCAAAATACATTTCTGT+CGG - chr3.4:52611456-52611475 MS.gene68459:intron 25.0%
! CAAAATTCAGAAATAACCAA+AGG - chr3.4:52611627-52611646 MS.gene68459:intron 25.0%
! CATATGCATATAAGTGAATA+TGG - chr3.4:52607417-52607436 MS.gene68459:CDS 25.0%
! CTGATTTACATTGTGAAATA+AGG - chr3.4:52608408-52608427 MS.gene68459:intron 25.0%
! CTGCATGCTAATTATAATTA+TGG - chr3.4:52609235-52609254 MS.gene68459:intron 25.0%
! GCTATTGTTTACATGAAAAA+TGG + chr3.4:52607981-52608000 None:intergenic 25.0%
! TAATTACTACCAATTTGTCA+TGG + chr3.4:52610776-52610795 None:intergenic 25.0%
! TATGGAAATATTGAGGTTAT+TGG - chr3.4:52608658-52608677 MS.gene68459:intron 25.0%
! TATGGTTATGATGCTAAATA+TGG - chr3.4:52609710-52609729 MS.gene68459:intron 25.0%
! TCAAATAAGCCAATACAAAT+AGG - chr3.4:52610181-52610200 MS.gene68459:intron 25.0%
! TCTCTATGTTGTATCTATTT+CGG + chr3.4:52608178-52608197 None:intergenic 25.0%
! TGAGTTTGAATTGCTAAATT+AGG - chr3.4:52608919-52608938 MS.gene68459:intron 25.0%
! TGCTAATTATAATTATGGCT+TGG - chr3.4:52609240-52609259 MS.gene68459:intron 25.0%
! TGTATATCTGTTACAAAACA+AGG + chr3.4:52609100-52609119 None:intergenic 25.0%
! TTATACATGATTTGAGTGAA+GGG - chr3.4:52607865-52607884 MS.gene68459:CDS 25.0%
! TTTAGGAAAATCGTTTAAAC+GGG - chr3.4:52611727-52611746 MS.gene68459:intron 25.0%
!! AAAAGGTTTAGCATTTGTTA+TGG - chr3.4:52608640-52608659 MS.gene68459:intron 25.0%
!! AAAGCATTTGGAAAATGTAA+GGG - chr3.4:52612108-52612127 MS.gene68459:intron 25.0%
!! ATTTTACGTGATTTGAGTAA+AGG - chr3.4:52607314-52607333 MS.gene68459:intron 25.0%
!! CTTTTGTATTTCATTGATGT+AGG - chr3.4:52610458-52610477 MS.gene68459:intron 25.0%
!! GTTCAGTTTTTATTCTTTTG+AGG - chr3.4:52611490-52611509 MS.gene68459:intron 25.0%
!! GTTTAAACGATTTTCCTAAA+AGG + chr3.4:52611727-52611746 None:intergenic 25.0%
!! TAAAGCATTTGGAAAATGTA+AGG - chr3.4:52612107-52612126 MS.gene68459:intron 25.0%
!! TGAATTTTCTGTTAGAATGA+AGG - chr3.4:52607353-52607372 MS.gene68459:intron 25.0%
!! TTGAACTTTCAAGTGAAAAA+AGG - chr3.4:52608623-52608642 MS.gene68459:intron 25.0%
!! TTTCATTAACTGATTCTTCA+GGG - chr3.4:52609734-52609753 MS.gene68459:intron 25.0%
!! TTTTACGTGATTTGAGTAAA+GGG - chr3.4:52607315-52607334 MS.gene68459:intron 25.0%
!!! AATAATTGGCTTGTTTCTAA+TGG + chr3.4:52611073-52611092 None:intergenic 25.0%
!!! AGATTCAACTTTTTGATTGT+AGG - chr3.4:52610998-52611017 MS.gene68459:intron 25.0%
!!! ATACTGATATGTGTTGTTTT+CGG - chr3.4:52607087-52607106 MS.gene68459:CDS 25.0%
!!! CATTTGTTATGGAAATATTG+AGG - chr3.4:52608651-52608670 MS.gene68459:intron 25.0%
!!! CTACTGTTTTTACTGAAAAA+TGG + chr3.4:52607595-52607614 None:intergenic 25.0%
!!! CTTTGGTTATTTCTGAATTT+TGG + chr3.4:52611629-52611648 None:intergenic 25.0%
!!! TAGGGACAATATTTTTAAGA+GGG - chr3.4:52610878-52610897 MS.gene68459:intron 25.0%
!!! TGAATTTGCTGTTAAAATGA+AGG - chr3.4:52608296-52608315 MS.gene68459:intron 25.0%
!!! TGTAAAGGTGCTTATATTTA+GGG - chr3.4:52610860-52610879 MS.gene68459:CDS 25.0%
!!! TTAGGGACAATATTTTTAAG+AGG - chr3.4:52610877-52610896 MS.gene68459:intron 25.0%
!!! TTGTAAAGGTGCTTATATTT+AGG - chr3.4:52610859-52610878 MS.gene68459:CDS 25.0%
AAATAACCAAAGGAAAAGTG+TGG - chr3.4:52611637-52611656 MS.gene68459:intron 30.0%
AACACTTCAATTCTGTCATA+TGG - chr3.4:52608566-52608585 MS.gene68459:intron 30.0%
AATAAGCTGAAAACAGCTTA+TGG - chr3.4:52610084-52610103 MS.gene68459:CDS 30.0%
AATCAGTTACCTAGATCAAA+TGG + chr3.4:52608394-52608413 None:intergenic 30.0%
AATTAGACCTGATGAAAAAG+AGG - chr3.4:52607133-52607152 MS.gene68459:intron 30.0%
AGAAGTAGAATACATATGGA+AGG + chr3.4:52608692-52608711 None:intergenic 30.0%
AGCAAACCTATAAGCTATTT+GGG - chr3.4:52607613-52607632 MS.gene68459:CDS 30.0%
AGCAAATCTCCAATATTTGA+TGG - chr3.4:52611584-52611603 MS.gene68459:intron 30.0%
AGGAAATGAGAAGTCATTTA+AGG + chr3.4:52610207-52610226 None:intergenic 30.0%
ATAAAGGATGACTCCAAAAA+TGG - chr3.4:52609280-52609299 MS.gene68459:intron 30.0%
ATAGAAAACAATCAAGGTGA+TGG + chr3.4:52610432-52610451 None:intergenic 30.0%
ATAGGTGAAGAAAATTCTGT+TGG - chr3.4:52611536-52611555 MS.gene68459:intron 30.0%
ATATGGATAAGCATGGTAAA+GGG - chr3.4:52608258-52608277 MS.gene68459:intron 30.0%
ATGATTCCCAAATAGCTTAT+AGG + chr3.4:52607622-52607641 None:intergenic 30.0%
ATTACGTTCTTTATCCAAAC+AGG + chr3.4:52609925-52609944 None:intergenic 30.0%
ATTAGACCTGATGAAAAAGA+GGG - chr3.4:52607134-52607153 MS.gene68459:intron 30.0%
ATTTACTTTGTGTGTAGTTG+TGG - chr3.4:52607276-52607295 MS.gene68459:intron 30.0%
ATTTATAGCTGAACTGTTTC+TGG + chr3.4:52608961-52608980 None:intergenic 30.0%
CAAAATTGAACCTAATTGAC+AGG + chr3.4:52608203-52608222 None:intergenic 30.0%
CAACCACTAATGTGATTTAT+GGG - chr3.4:52608467-52608486 MS.gene68459:intron 30.0%
CAAGCTCAGAAAATAACATT+CGG + chr3.4:52608820-52608839 None:intergenic 30.0%
CAGATATACAACGATCAAAT+TGG - chr3.4:52609110-52609129 MS.gene68459:intron 30.0%
CAGCACTTAAAAGTTAAAAC+TGG + chr3.4:52609218-52609237 None:intergenic 30.0%
CATACAAAGAAACAACAAAC+AGG + chr3.4:52608434-52608453 None:intergenic 30.0%
CTGTTTCAATTAAAAAGTCC+AGG + chr3.4:52611154-52611173 None:intergenic 30.0%
GAAGTAGAATACATATGGAA+GGG + chr3.4:52608691-52608710 None:intergenic 30.0%
GTACAGAAGTAGAATACATA+TGG + chr3.4:52608696-52608715 None:intergenic 30.0%
TAAAGGATGACTCCAAAAAT+GGG - chr3.4:52609281-52609300 MS.gene68459:intron 30.0%
TAGCAAACCTATAAGCTATT+TGG - chr3.4:52607612-52607631 MS.gene68459:CDS 30.0%
TATATCTTCTACCACATGTT+TGG - chr3.4:52610230-52610249 MS.gene68459:intron 30.0%
TCAACCACTAATGTGATTTA+TGG - chr3.4:52608466-52608485 MS.gene68459:intron 30.0%
TCTAACTTTCCATGACAAAT+TGG - chr3.4:52610764-52610783 MS.gene68459:intron 30.0%
TCTTAAGATATGGATAAGCA+TGG - chr3.4:52608251-52608270 MS.gene68459:intron 30.0%
TGAGATTCATCATAGTGAAT+CGG - chr3.4:52608135-52608154 MS.gene68459:CDS 30.0%
TGATTTGAGTAAAGGGTAAT+TGG - chr3.4:52607322-52607341 MS.gene68459:intron 30.0%
TGTTGTATTGTTTGATCACA+AGG + chr3.4:52611932-52611951 None:intergenic 30.0%
TTACAATAAGACTCGATTCA+CGG + chr3.4:52607930-52607949 None:intergenic 30.0%
TTACCTCAAGAAAAGAACAA+CGG + chr3.4:52608985-52609004 None:intergenic 30.0%
TTACGTTCTTTATCCAAACA+GGG + chr3.4:52609924-52609943 None:intergenic 30.0%
TTAGGAAAATCGTTTAAACG+GGG - chr3.4:52611728-52611747 MS.gene68459:intron 30.0%
TTATCTATCTACTACCTGAT+TGG + chr3.4:52607246-52607265 None:intergenic 30.0%
TTATGTTGAGAATCTGATAG+AGG - chr3.4:52609306-52609325 MS.gene68459:intron 30.0%
TTCTCTATCTAATACCTGAT+TGG + chr3.4:52607796-52607815 None:intergenic 30.0%
TTGAATTTCCAATCGTGAAT+CGG - chr3.4:52607529-52607548 MS.gene68459:CDS 30.0%
TTGTAACAATCGAGTTAAAC+TGG + chr3.4:52610551-52610570 None:intergenic 30.0%
! AACAGAATTTTCTTCACCTA+TGG + chr3.4:52611537-52611556 None:intergenic 30.0%
! ACACCAATGCTAGAAATTTT+AGG + chr3.4:52609682-52609701 None:intergenic 30.0%
! ATTTTGCATGATCTGAGTAA+AGG - chr3.4:52607473-52607492 MS.gene68459:CDS 30.0%
! ATTTTGTATCGAAGTGAGAT+AGG - chr3.4:52608217-52608236 MS.gene68459:intron 30.0%
! CATTTAAGGCCTATTTGTAT+TGG + chr3.4:52610193-52610212 None:intergenic 30.0%
! CTCAACATAAAACCCATTTT+TGG + chr3.4:52609296-52609315 None:intergenic 30.0%
! GTTTCATTAACTGATTCTTC+AGG - chr3.4:52609733-52609752 MS.gene68459:intron 30.0%
! TTTTGCATGATCTGAGTAAA+GGG - chr3.4:52607474-52607493 MS.gene68459:CDS 30.0%
!! AGGGACAATATTTTTAAGAG+GGG - chr3.4:52610879-52610898 MS.gene68459:intron 30.0%
!! ATCTAATTTCATCGATTTGC+TGG + chr3.4:52611421-52611440 None:intergenic 30.0%
!! ATTTCTGAATTTTGGAGACT+CGG + chr3.4:52611621-52611640 None:intergenic 30.0%
!! CTACCTAAAATTTCTAGCAT+TGG - chr3.4:52609676-52609695 MS.gene68459:intron 30.0%
!!! TTGTTTTCGGATTTTGAAAC+AGG - chr3.4:52607100-52607119 MS.gene68459:intron 30.0%
AAAAGACCAAATGAGAGAGA+CGG - chr3.4:52612132-52612151 MS.gene68459:intron 35.0%
AAAATGCATTAGCAACTCCA+AGG + chr3.4:52609060-52609079 None:intergenic 35.0%
AAATGCATTAGCAACTCCAA+GGG + chr3.4:52609059-52609078 None:intergenic 35.0%
AACTCTGGTCCATCAAATAT+TGG + chr3.4:52611596-52611615 None:intergenic 35.0%
AAGAAATCGTTATCTCAGCT+TGG - chr3.4:52609878-52609897 MS.gene68459:intron 35.0%
AATAAGATCCGATTCACGAT+TGG + chr3.4:52607540-52607559 None:intergenic 35.0%
ACAATGCATCAATAAGTACC+TGG + chr3.4:52608592-52608611 None:intergenic 35.0%
AGAAATCGTTATCTCAGCTT+GGG - chr3.4:52609879-52609898 MS.gene68459:intron 35.0%
AGTTAAACGGCCAAAAGAAA+AGG + chr3.4:52611876-52611895 None:intergenic 35.0%
ATGCAAACTTCATTACAGTC+AGG - chr3.4:52611758-52611777 MS.gene68459:intron 35.0%
ATTCTACTTCTGTACTAGTC+TGG - chr3.4:52608701-52608720 MS.gene68459:intron 35.0%
CAAATGGGGAAAAAAGTAGT+TGG - chr3.4:52607668-52607687 MS.gene68459:CDS 35.0%
CATAGAGATTCCTGTCAATT+AGG - chr3.4:52608190-52608209 MS.gene68459:intron 35.0%
CCATATCATGTTGCAGATAA+AGG - chr3.4:52609264-52609283 MS.gene68459:intron 35.0%
CCTTTATCTGCAACATGATA+TGG + chr3.4:52609267-52609286 None:intergenic 35.0%
CGATTGTTACAAGAATCACT+TGG - chr3.4:52610559-52610578 MS.gene68459:CDS 35.0%
CGGAAAGACTTATACAATGT+GGG - chr3.4:52608727-52608746 MS.gene68459:intron 35.0%
CTTATTTCCATAACCTCTCT+AGG + chr3.4:52610070-52610089 None:intergenic 35.0%
GAGATTCATCATAGTGAATC+GGG - chr3.4:52608136-52608155 MS.gene68459:CDS 35.0%
GATATGGATAAGCATGGTAA+AGG - chr3.4:52608257-52608276 MS.gene68459:intron 35.0%
GCCTTTCAAGCAGAAAAAAA+CGG - chr3.4:52609555-52609574 MS.gene68459:CDS 35.0%
GGAAAGACTTATACAATGTG+GGG - chr3.4:52608728-52608747 MS.gene68459:intron 35.0%
GGAAGAACTTATTAGAGTGA+AGG - chr3.4:52611220-52611239 MS.gene68459:intron 35.0%
GTGATTCATCATAGTGAATC+AGG - chr3.4:52607708-52607727 MS.gene68459:CDS 35.0%
GTTAAGAAGGTTTCTTCTGA+TGG - chr3.4:52607167-52607186 MS.gene68459:intron 35.0%
TAAACTATTGAAACCCTTCG+TGG + chr3.4:52609762-52609781 None:intergenic 35.0%
TAAGAGGGGGTTTATCATTA+GGG - chr3.4:52610893-52610912 MS.gene68459:intron 35.0%
TAAGCATGGTAAAGGGTAAT+TGG - chr3.4:52608265-52608284 MS.gene68459:intron 35.0%
TAGTTGGATGCACTAAGTTT+AGG - chr3.4:52608079-52608098 MS.gene68459:CDS 35.0%
TCCATTTCTGTGTTTGATGA+GGG - chr3.4:52612320-52612339 MS.gene68459:intron 35.0%
TGTCATTGAGTCTTTGTGTA+AGG - chr3.4:52609629-52609648 MS.gene68459:intron 35.0%
TTAAGAGGGGGTTTATCATT+AGG - chr3.4:52610892-52610911 MS.gene68459:intron 35.0%
TTGTTACAAGAATCACTTGG+TGG - chr3.4:52610562-52610581 MS.gene68459:CDS 35.0%
TTTACTCAATCCAAATCAGC+AGG - chr3.4:52609136-52609155 MS.gene68459:intron 35.0%
TTTCATAAGCTATCCTAGAG+AGG - chr3.4:52610054-52610073 MS.gene68459:CDS 35.0%
! AAAAAGCCACACTTTTCCTT+TGG + chr3.4:52611646-52611665 None:intergenic 35.0%
! AGCTGACTTTCAACTGATTA+AGG + chr3.4:52611313-52611332 None:intergenic 35.0%
! AGTTAGACAGGAGTATAGAA+CGG + chr3.4:52611340-52611359 None:intergenic 35.0%
! ATGCAAGTCTCTGTTTTCTT+TGG - chr3.4:52611193-52611212 MS.gene68459:intron 35.0%
! GACATGGTGTCAAAGTTAAA+CGG + chr3.4:52611889-52611908 None:intergenic 35.0%
! GAGCTTGAAGATTTGTTCAA+TGG + chr3.4:52611854-52611873 None:intergenic 35.0%
! GGTATTCAGCTTCTAAGAAA+TGG + chr3.4:52609425-52609444 None:intergenic 35.0%
! GTTATGATGCCATTTGATCT+AGG - chr3.4:52608382-52608401 MS.gene68459:intron 35.0%
! GTTTCTGAGAGTTCAACTTT+CGG - chr3.4:52611695-52611714 MS.gene68459:intron 35.0%
! TCACCGACAGAAATGTATTT+TGG + chr3.4:52611462-52611481 None:intergenic 35.0%
! TCATTGATGTAGGCTTTTAG+TGG - chr3.4:52610468-52610487 MS.gene68459:intron 35.0%
! TCTTCAAGCTCCTTTTCTTT+TGG - chr3.4:52611863-52611882 MS.gene68459:intron 35.0%
! TCTTTCGCTCTTAAAGCATT+TGG - chr3.4:52612096-52612115 MS.gene68459:intron 35.0%
! TGAAAAAGAGGGTGATTTGT+TGG - chr3.4:52607145-52607164 MS.gene68459:intron 35.0%
! TTTCTGAGAGTTCAACTTTC+GGG - chr3.4:52611696-52611715 MS.gene68459:intron 35.0%
! TTTTGATGCTAACTCCAATC+AGG - chr3.4:52607229-52607248 MS.gene68459:CDS 35.0%
!! AAATCACCCTCTTTTTCATC+AGG + chr3.4:52607143-52607162 None:intergenic 35.0%
!! AAATTTCTAGCATTGGTGTG+AGG - chr3.4:52609683-52609702 MS.gene68459:intron 35.0%
!! AATGCTTTAAGAGCGAAAGA+AGG + chr3.4:52612096-52612115 None:intergenic 35.0%
!! GGGACAATATTTTTAAGAGG+GGG - chr3.4:52610880-52610899 MS.gene68459:intron 35.0%
!! GTTTGGATGGGTTTTTCAAT+AGG - chr3.4:52610247-52610266 MS.gene68459:CDS 35.0%
!! TCAGGAAGATGTTTTTCAGT+CGG - chr3.4:52608505-52608524 MS.gene68459:intron 35.0%
!!! GCTTTTTCATCGAGTTATCT+AGG - chr3.4:52611659-52611678 MS.gene68459:intron 35.0%
!!! TCCGTTTTTTTCTGCTTGAA+AGG + chr3.4:52609559-52609578 None:intergenic 35.0%
AACACTATCCCCATCTAATC+CGG + chr3.4:52609816-52609835 None:intergenic 40.0%
AAGAGGGGGTTTATCATTAG+GGG - chr3.4:52610894-52610913 MS.gene68459:intron 40.0%
AAGCTATCCTAGAGAGGTTA+TGG - chr3.4:52610060-52610079 MS.gene68459:CDS 40.0%
AATAACATTCGGAAGATCCG+AGG + chr3.4:52608809-52608828 None:intergenic 40.0%
ACAAGATGCACAAAGGAATG+TGG + chr3.4:52611981-52612000 None:intergenic 40.0%
ACCAGCCACAAACATAATTC+AGG + chr3.4:52612232-52612251 None:intergenic 40.0%
ACCCTCATCAAACACAGAAA+TGG + chr3.4:52612324-52612343 None:intergenic 40.0%
ACTGGTGTAGCTGTAAATGT+TGG - chr3.4:52611371-52611390 MS.gene68459:intron 40.0%
AGGAGTTTACCTTCAAGTGT+CGG + chr3.4:52611134-52611153 None:intergenic 40.0%
CAATTATCTGTAATCCCCTC+TGG + chr3.4:52611811-52611830 None:intergenic 40.0%
CAGCCCATAAATCACATTAG+TGG + chr3.4:52608473-52608492 None:intergenic 40.0%
CATCGAGTTATCTAGGAAGT+AGG - chr3.4:52611666-52611685 MS.gene68459:intron 40.0%
CTAATCCGGCAAGATCAATA+AGG + chr3.4:52609802-52609821 None:intergenic 40.0%
CTATATTCGTTTGTGCTGCA+GGG - chr3.4:52609533-52609552 MS.gene68459:CDS 40.0%
CTCCATTTCTGTGTTTGATG+AGG - chr3.4:52612319-52612338 MS.gene68459:intron 40.0%
CTTCTACCACATGTTTGGAT+GGG - chr3.4:52610235-52610254 MS.gene68459:intron 40.0%
GAAAAACCCATCCAAACATG+TGG + chr3.4:52610244-52610263 None:intergenic 40.0%
GAACTTATTAGAGTGAAGGC+TGG - chr3.4:52611224-52611243 MS.gene68459:intron 40.0%
GATAATGTGCATTTGTCTCC+AGG - chr3.4:52612265-52612284 MS.gene68459:intron 40.0%
GCCACAAACATAATTCAGGA+AGG + chr3.4:52612228-52612247 None:intergenic 40.0%
GCCTTCCTGAATTATGTTTG+TGG - chr3.4:52612224-52612243 MS.gene68459:CDS 40.0%
GCGGAAAGACTTATACAATG+TGG - chr3.4:52608726-52608745 MS.gene68459:intron 40.0%
GGGAAAAGGTAGTATTTACC+TGG - chr3.4:52610914-52610933 MS.gene68459:intron 40.0%
GGGTTTATCATTAGGGGAAA+AGG - chr3.4:52610900-52610919 MS.gene68459:intron 40.0%
GTAGTTGGCTACACTATGTT+TGG - chr3.4:52607683-52607702 MS.gene68459:CDS 40.0%
GTGATGTTCATAGCTCAGTT+GGG - chr3.4:52611246-52611265 MS.gene68459:intron 40.0%
TATGATGCAGACACAACCAT+AGG - chr3.4:52611518-52611537 MS.gene68459:intron 40.0%
TCCTGAATTATGTTTGTGGC+TGG - chr3.4:52612228-52612247 MS.gene68459:CDS 40.0%
TCTTCTACCACATGTTTGGA+TGG - chr3.4:52610234-52610253 MS.gene68459:intron 40.0%
TGATGTTCATAGCTCAGTTG+GGG - chr3.4:52611247-52611266 MS.gene68459:intron 40.0%
TGGTAAAATCCGACACTTGA+AGG - chr3.4:52611122-52611141 MS.gene68459:intron 40.0%
TTCAATTCTGTCATATGGCC+AGG - chr3.4:52608571-52608590 MS.gene68459:intron 40.0%
! ACTTTCGGGAATGACCTTTT+AGG - chr3.4:52611710-52611729 MS.gene68459:intron 40.0%
! AGTTAAAGCGTTTCGAACCA+AGG + chr3.4:52608540-52608559 None:intergenic 40.0%
! ATGCCGTTGTTCTTTTCTTG+AGG - chr3.4:52608979-52608998 MS.gene68459:intron 40.0%
! ATTGATCTTGCCGGATTAGA+TGG - chr3.4:52609803-52609822 MS.gene68459:intron 40.0%
! CTTCTGATGGTTTGTGTGTT+GGG - chr3.4:52607180-52607199 MS.gene68459:intron 40.0%
! GTCTGTTTTCCCATAGACAT+TGG + chr3.4:52609853-52609872 None:intergenic 40.0%
! GTTAAAGCGTTTCGAACCAA+GGG + chr3.4:52608539-52608558 None:intergenic 40.0%
! TCAGCTTCTAAGAAATGGCA+TGG + chr3.4:52609420-52609439 None:intergenic 40.0%
! TCTTCTGATGGTTTGTGTGT+TGG - chr3.4:52607179-52607198 MS.gene68459:intron 40.0%
! TGAAGAGTATAGCTCCATGA+AGG - chr3.4:52612343-52612362 MS.gene68459:intron 40.0%
! TTAAAGCGTTTCGAACCAAG+GGG + chr3.4:52608538-52608557 None:intergenic 40.0%
! TTCTGATGGTTTGTGTGTTG+GGG - chr3.4:52607181-52607200 MS.gene68459:intron 40.0%
! TTGATCTTGCCGGATTAGAT+GGG - chr3.4:52609804-52609823 MS.gene68459:intron 40.0%
! TTGGTTCGAAACGCTTTAAC+TGG - chr3.4:52608539-52608558 MS.gene68459:intron 40.0%
!! AACAATCAAGGTGATGGACT+TGG + chr3.4:52610426-52610445 None:intergenic 40.0%
!! AGGAGGTAGTACTTGTTATG+AGG + chr3.4:52610622-52610641 None:intergenic 40.0%
!! ATCAGCCTTATTGATCTTGC+CGG - chr3.4:52609794-52609813 MS.gene68459:intron 40.0%
!! ATGGGGATAGTGTTGACAAT+GGG - chr3.4:52609822-52609841 MS.gene68459:intron 40.0%
!! CTTCTTTGAAGAGCATTGTC+CGG - chr3.4:52610362-52610381 MS.gene68459:intron 40.0%
!! GAAGATGTTTTTCAGTCGGT+TGG - chr3.4:52608509-52608528 MS.gene68459:intron 40.0%
!! GAGGTAGTACTTGTTATGAG+GGG + chr3.4:52610620-52610639 None:intergenic 40.0%
!! GCTTTTAGTGGATGCTCTTA+CGG - chr3.4:52610480-52610499 MS.gene68459:intron 40.0%
!! GGAGGTAGTACTTGTTATGA+GGG + chr3.4:52610621-52610640 None:intergenic 40.0%
!! GGGTGATTTGTTGGTTAAGA+AGG - chr3.4:52607154-52607173 MS.gene68459:intron 40.0%
!! GTCTCTGTTTTCTTTGGTTC+AGG - chr3.4:52611199-52611218 MS.gene68459:intron 40.0%
!!! TCGGATTTTGAAACAGGTTG+TGG - chr3.4:52607106-52607125 MS.gene68459:intron 40.0%
!!! TTTTGATGCTGACTCCAATC+AGG - chr3.4:52607779-52607798 MS.gene68459:CDS 40.0%
AATGTGCATTTGTCTCCAGG+TGG - chr3.4:52612268-52612287 MS.gene68459:intron 45.0%
ACAGTCTGCACACTCAGATT+TGG - chr3.4:52611033-52611052 MS.gene68459:intron 45.0%
ACCATGTCCAGAAATCGACA+AGG - chr3.4:52611901-52611920 MS.gene68459:intron 45.0%
AGTCTGCACACTCAGATTTG+GGG - chr3.4:52611035-52611054 MS.gene68459:intron 45.0%
CAAACTACGCTCTTTGATCC+AGG + chr3.4:52610935-52610954 None:intergenic 45.0%
CAGTCTGCACACTCAGATTT+GGG - chr3.4:52611034-52611053 MS.gene68459:intron 45.0%
CTCCAGGTGGAGAAATTGAA+AGG - chr3.4:52612281-52612300 MS.gene68459:intron 45.0%
CTCCTTTCAATTTCTCCACC+TGG + chr3.4:52612286-52612305 None:intergenic 45.0%
CTGTACGACAAGATGCACAA+AGG + chr3.4:52611988-52612007 None:intergenic 45.0%
GACAAGCTCACTGCTACATT+CGG + chr3.4:52609037-52609056 None:intergenic 45.0%
GACACTTGAAGGTAAACTCC+TGG - chr3.4:52611133-52611152 MS.gene68459:intron 45.0%
GATGTTCATAGCTCAGTTGG+GGG - chr3.4:52611248-52611267 MS.gene68459:intron 45.0%
GCAACTAATCCACAAGTAGC+CGG + chr3.4:52610384-52610403 None:intergenic 45.0%
GCTATATTCGTTTGTGCTGC+AGG - chr3.4:52609532-52609551 MS.gene68459:CDS 45.0%
GGGCTGTTCTATGTATGTTC+AGG - chr3.4:52608487-52608506 MS.gene68459:intron 45.0%
GGTAAGAATGGATGCTTCCA+AGG - chr3.4:52611269-52611288 MS.gene68459:intron 45.0%
GGTGATGTTCATAGCTCAGT+TGG - chr3.4:52611245-52611264 MS.gene68459:intron 45.0%
GTCAACAGGGAATTGTTCCT+CGG - chr3.4:52608789-52608808 MS.gene68459:intron 45.0%
TCTTTATCCAAACAGGGCCT+TGG + chr3.4:52609918-52609937 None:intergenic 45.0%
TGTAGCTGTAAATGTTGGCG+AGG - chr3.4:52611376-52611395 MS.gene68459:intron 45.0%
TGTTCAATGGCGAGTTCTGT+TGG + chr3.4:52611841-52611860 None:intergenic 45.0%
! CGTCGCACAAGTTCTGATTA+AGG - chr3.4:52609351-52609370 MS.gene68459:intron 45.0%
! CTTCTGTACTAGTCTGGAAG+CGG - chr3.4:52608707-52608726 MS.gene68459:intron 45.0%
! GCATTGGTGTGAGGAAACTA+TGG - chr3.4:52609692-52609711 MS.gene68459:intron 45.0%
! TGATCTTGCCGGATTAGATG+GGG - chr3.4:52609805-52609824 MS.gene68459:intron 45.0%
!! ACCTTGTCGATTTCTGGACA+TGG + chr3.4:52611905-52611924 None:intergenic 45.0%
!! GATGGGGATAGTGTTGACAA+TGG - chr3.4:52609821-52609840 MS.gene68459:intron 45.0%
!! GGTTCAACCTTGTCGATTTC+TGG + chr3.4:52611911-52611930 None:intergenic 45.0%
!! GTACTTGTTATGAGGGGAGA+TGG + chr3.4:52610614-52610633 None:intergenic 45.0%
!! AAAATAATAATAATTAATGT+AGG + chr3.4:52608861-52608880 None:intergenic 5.0%
AACGAGGCTGACGATTTGAG+TGG - chr3.4:52611102-52611121 MS.gene68459:intron 50.0%
AATCAGCAGGACCTTGAGGT+AGG - chr3.4:52609149-52609168 MS.gene68459:intron 50.0%
AGCTCAGTTGGGGGTAAGAA+TGG - chr3.4:52611257-52611276 MS.gene68459:intron 50.0%
ATCAGCAGGACCTTGAGGTA+GGG - chr3.4:52609150-52609169 MS.gene68459:intron 50.0%
ATGGGAGCAGCCAATGTCTA+TGG - chr3.4:52609840-52609859 MS.gene68459:intron 50.0%
CCCTCGTGTGATAGTCAACA+GGG - chr3.4:52608776-52608795 MS.gene68459:intron 50.0%
CTTCCAAGGACATAACGTGC+GGG - chr3.4:52611283-52611302 MS.gene68459:intron 50.0%
CTTGGCAGAAAGTCTCCAGA+GGG - chr3.4:52611793-52611812 MS.gene68459:intron 50.0%
GACAGTATACCCCTACCTCA+AGG + chr3.4:52609163-52609182 None:intergenic 50.0%
GCTTCCAAGGACATAACGTG+CGG - chr3.4:52611282-52611301 MS.gene68459:intron 50.0%
TCCAAATCAGCAGGACCTTG+AGG - chr3.4:52609145-52609164 MS.gene68459:intron 50.0%
TCCCTCGTGTGATAGTCAAC+AGG - chr3.4:52608775-52608794 MS.gene68459:intron 50.0%
TGGGAGCAGCCAATGTCTAT+GGG - chr3.4:52609841-52609860 MS.gene68459:intron 50.0%
TGGGTAAGATCCCATGACCA+AGG - chr3.4:52609898-52609917 MS.gene68459:intron 50.0%
TTGGCAGAAAGTCTCCAGAG+GGG - chr3.4:52611794-52611813 MS.gene68459:intron 50.0%
TTTCCCGCACGTTATGTCCT+TGG + chr3.4:52611289-52611308 None:intergenic 50.0%
TTTGGAGACTCGGACAACTC+TGG + chr3.4:52611611-52611630 None:intergenic 50.0%
! ACCTCAAGGTCCTGCTGATT+TGG + chr3.4:52609149-52609168 None:intergenic 50.0%
! ATTCTTCAGGGCACCACGAA+GGG - chr3.4:52609746-52609765 MS.gene68459:intron 50.0%
! CCCTGTTGACTATCACACGA+GGG + chr3.4:52608779-52608798 None:intergenic 50.0%
! TCCCTGTTGACTATCACACG+AGG + chr3.4:52608780-52608799 None:intergenic 50.0%
!! GGAGCTCGAGAGTGTTTGTA+AGG - chr3.4:52612153-52612172 MS.gene68459:CDS 50.0%
ACACGAGGGATCCTCAGTCA+TGG + chr3.4:52608765-52608784 None:intergenic 55.0%
CCAAACAGGGCCTTGGTCAT+GGG + chr3.4:52609911-52609930 None:intergenic 55.0%
CCTTGGCAGAAAGTCTCCAG+AGG - chr3.4:52611792-52611811 MS.gene68459:intron 55.0%
CGAGCTCCGTCTCTCTCATT+TGG + chr3.4:52612141-52612160 None:intergenic 55.0%
GGATCCTCAGTCATGGCACT+TGG + chr3.4:52608758-52608777 None:intergenic 55.0%
GTAGCAGTGAGCTTGTCCCT+TGG - chr3.4:52609040-52609059 MS.gene68459:intron 55.0%
GTCAGGCAAAGCTGAGTCCT+TGG - chr3.4:52611775-52611794 MS.gene68459:intron 55.0%
TACGCCAAGTGCCATGACTG+AGG - chr3.4:52608751-52608770 MS.gene68459:intron 55.0%
TCAGCAGGACCTTGAGGTAG+GGG - chr3.4:52609151-52609170 MS.gene68459:intron 55.0%
TCCAAACAGGGCCTTGGTCA+TGG + chr3.4:52609912-52609931 None:intergenic 55.0%
! CCTCTGGAGACTTTCTGCCA+AGG + chr3.4:52611795-52611814 None:intergenic 55.0%
! GAGCATTGTCCGGCTACTTG+TGG - chr3.4:52610372-52610391 MS.gene68459:intron 55.0%
! GATTCTTCAGGGCACCACGA+AGG - chr3.4:52609745-52609764 MS.gene68459:intron 55.0%
CCCATGACCAAGGCCCTGTT+TGG - chr3.4:52609908-52609927 MS.gene68459:intron 60.0%
! TCAGTCGGTTGGTGTCCCCT+TGG - chr3.4:52608520-52608539 MS.gene68459:intron 60.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 52607026 52612376 52607026 ID=MS.gene68459
chr3.4 mRNA 52607026 52612376 52607026 ID=MS.gene68459.t1;Parent=MS.gene68459
chr3.4 exon 52612365 52612376 52612365 ID=MS.gene68459.t1.exon1;Parent=MS.gene68459.t1
chr3.4 CDS 52612365 52612376 52612365 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52612152 52612280 52612152 ID=MS.gene68459.t1.exon2;Parent=MS.gene68459.t1
chr3.4 CDS 52612152 52612280 52612152 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52610810 52610893 52610810 ID=MS.gene68459.t1.exon3;Parent=MS.gene68459.t1
chr3.4 CDS 52610810 52610893 52610810 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52610558 52610683 52610558 ID=MS.gene68459.t1.exon4;Parent=MS.gene68459.t1
chr3.4 CDS 52610558 52610683 52610558 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52610402 52610461 52610402 ID=MS.gene68459.t1.exon5;Parent=MS.gene68459.t1
chr3.4 CDS 52610402 52610461 52610402 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52610236 52610289 52610236 ID=MS.gene68459.t1.exon6;Parent=MS.gene68459.t1
chr3.4 CDS 52610236 52610289 52610236 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52610030 52610122 52610030 ID=MS.gene68459.t1.exon7;Parent=MS.gene68459.t1
chr3.4 CDS 52610030 52610122 52610030 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52609502 52609647 52609502 ID=MS.gene68459.t1.exon8;Parent=MS.gene68459.t1
chr3.4 CDS 52609502 52609647 52609502 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52608802 52608922 52608802 ID=MS.gene68459.t1.exon9;Parent=MS.gene68459.t1
chr3.4 CDS 52608802 52608922 52608802 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52608077 52608181 52608077 ID=MS.gene68459.t1.exon10;Parent=MS.gene68459.t1
chr3.4 CDS 52608077 52608181 52608077 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52607372 52607917 52607372 ID=MS.gene68459.t1.exon11;Parent=MS.gene68459.t1
chr3.4 CDS 52607372 52607917 52607372 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52607192 52607290 52607192 ID=MS.gene68459.t1.exon12;Parent=MS.gene68459.t1
chr3.4 CDS 52607192 52607290 52607192 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
chr3.4 exon 52607026 52607115 52607026 ID=MS.gene68459.t1.exon13;Parent=MS.gene68459.t1
chr3.4 CDS 52607026 52607115 52607026 ID=cds.MS.gene68459.t1;Parent=MS.gene68459.t1
Gene Sequence

>MS.gene68459

ATGTTAAGGCAAGTTCAAATTTTTAGTTTCTGTTTTTGTTGCATTTTTCAGTGTTCAATTTATACTGATATGTGTTGTTTTCGGATTTTGAAACAGGTTGTGGTGAGAATTAGACCTGATGAAAAAGAGGGTGATTTGTTGGTTAAGAAGGTTTCTTCTGATGGTTTGTGTGTTGGGGATGAACAGTTCAATTTTGATGAAGTTTTTGATGCTAACTCCAATCAGGTAGTAGATAGATAAATTATCTTAGATTTACTTTGTGTGTAGTTGTGGTTTAGATCTGAAATGATTTTACGTGATTTGAGTAAAGGGTAATTGGAAATTAGTTGAATTTTCTGTTAGAATGAAGGAATATAAGTAATTTGACTTATTTTGTTTGATTTTGTTGCTTCATATGCATATAAGTGAATATGGTAGAACAGTATGATATTGATTTGATCTACAATGATTTTGCATGATCTGAGTAAAGGGCATGATTATCAAATCTAGCTTGAAATCGTGAATTGAATTTCCAATCGTGAATCGGATCTTATTATGAATCGTAAGTTACATCACTGATAAAAATGCCATTTTTCAGTAAAAACAGTAGCAAACCTATAAGCTATTTGGGAATCATTATAGTTCAAGACTAAAGTAATAAATCAAATGGGGAAAAAAGTAGTTGGCTACACTATGTTTGGTTGTGATTCATCATAGTGAATCAGGATGTAAAATAAAATTCATGTGCAAAATAAATACAACAAAGAGATTCGTTTTTGATGCTGACTCCAATCAGGTATTAGATAGAGAACTTAGATTTAGTTTGCTGTGTGTGTAATTGTGCTTTAGATTTTCAATGATTATACATGATTTGAGTGAAGGGTATGATTATCAAATTGAGATTCAACTCGTGAATTCTGAACCGTGAATCGAGTCTTATTGTAAATCATAAGTTGGATTACTATTAAAAATCCCATTTTTCATGTAAACAATAGCAAGACTATAAGAAAATATATCATTACAGGGATTCATCATAGTTCAAGATTAAAGTCATAAATCAAATGGGGAAAAAAGTAGTTGGATGCACTAAGTTTAGGTTGTCATTCATTAGAATTAGAATTTGAATGAACTGAGATTCATCATAGTGAATCGGGATTTGAAGATTCGTGTCCGAAATAGATACAACATAGAGATTCCTGTCAATTAGGTTCAATTTTGTATCGAAGTGAGATAGGTATTAGATGTATCTTAAGATATGGATAAGCATGGTAAAGGGTAATTGGAAATTTGTTGAATTTGCTGTTAAAATGAAGGAATAAGTCATTTGACTTATTTGGTTTAATTTTGTTGTTTCATATGCATATAGTATGATAGAATGTTATGATGCCATTTGATCTAGGTAACTGATTTACATTGTGAAATAAGGCCTGTTTGTTGTTTCTTTGTATGTGTAATAGAAAATCAACCACTAATGTGATTTATGGGCTGTTCTATGTATGTTCAGGAAGATGTTTTTCAGTCGGTTGGTGTCCCCTTGGTTCGAAACGCTTTAACTGGATACAACACTTCAATTCTGTCATATGGCCAGGTACTTATTGATGCATTGTGTGTTGTATTTTTGAACTTTCAAGTGAAAAAAGGTTTAGCATTTGTTATGGAAATATTGAGGTTATTGGTTATTAACCCTTCCATATGTATTCTACTTCTGTACTAGTCTGGAAGCGGAAAGACTTATACAATGTGGGGTACGCCAAGTGCCATGACTGAGGATCCCTCGTGTGATAGTCAACAGGGAATTGTTCCTCGGATCTTCCGAATGTTATTTTCTGAGCTTGAAAGAGTATGTTCTACTTCCTACATTAATTATTATTATTTTACTAAATTTCTGCATTATGGTATTTTGAATTGACTGTCTGAGTTTGAATTGCTAAATTAGGAGAGACTTATGTCTGACCAGAAACAGTTCAGCTATAAATGCCGTTGTTCTTTTCTTGAGGTAAGTTTGAACTTGAATGTCATTATAAAGCTTCCGAATGTAGCAGTGAGCTTGTCCCTTGGAGTTGCTAATGCATTTTTTTGCTCCTTTTTTTTTCCTTGTTTTGTAACAGATATACAACGATCAAATTGGGAATTTACTCAATCCAAATCAGCAGGACCTTGAGGTAGGGGTATACTGTCATCTTCTGTTATATATGATATTATTTTCTACTCCAGTTTTAACTTTTAAGTGCTGCATGCTAATTATAATTATGGCTTGGTCCATATCATGTTGCAGATAAAGGATGACTCCAAAAATGGGTTTTATGTTGAGAATCTGATAGAGGAATATGTCACATGCTATGATGACGTCGCACAAGTTCTGATTAAGGTAGAGAAGCACTCTAGCATTTTACAGTTGAAAGTCAGAGTTCTCCATGCCATTTCTTAGAAGCTGAATACCTGTTTATGTTAGCTGATATATTTGTCAAGCAATTGTATGCATTTGCCTTCGTTTTTTTGTTTAATATATTTGTTCAAATCTTGATCAGCTATATTCGTTTGTGCTGCAGGGCCTTTCAAGCAGAAAAAAACGGAGCAACAAGCTTAAATTCTAATAGCTCTAGATCACATGTCATTTTCACTTTTGTCATTGAGTCTTTGTGTAAGGTAATACCATATTTTTATAACAATTCTACCTAAAATTTCTAGCATTGGTGTGAGGAAACTATGGTTATGATGCTAAATATGGGTTTCATTAACTGATTCTTCAGGGCACCACGAAGGGTTTCAATAGTTTAAAAGCTAGCAGAATCAGCCTTATTGATCTTGCCGGATTAGATGGGGATAGTGTTGACAATGGGAGCAGCCAATGTCTATGGGAAAACAGACATGTAAAGAAATCGTTATCTCAGCTTGGGTAAGATCCCATGACCAAGGCCCTGTTTGGATAAAGAACGTAATTAATTGTTTATCGCACAAGCACTTATCATATAAGTGCGTATGTATAAATTATTTCTATAACAATGGATAAAAATAAAGTGAAATAGTATTCATATAACCTATAAGTTGTTTTCATAAGCTATCCTAGAGAGGTTATGGAAATAAGCTGAAAACAGCTTATGGACATGTCAAATGTTTTTTTCACAAGCACTTGTGAAACTAAACAGTCTCACAAGTGCTTATGTCAGTTAATGAGCTCAAATAAGCCAATACAAATAGGCCTTAAATGACTTCTCATTTCCTATTTATATCTTCTACCACATGTTTGGATGGGTTTTTCAATAGGTTGAAACATAAAAGTAATGCATTATCTTCGTATTTTACTATGTCAAACTATTGCTACTTTGCTACTTAATTCCATATATTTGTAACATTTTTCTTCTTTGAAGAGCATTGTCCGGCTACTTGTGGATTAGTTGCTTGTATCACTAGCTAATAACCAAGTCCATCACCTTGATTGTTTTCTATTTGTAACTTTTGTATTTCATTGATGTAGGCTTTTAGTGGATGCTCTTACGGACAACTCTCAGTCTAGAGAAGATGAAGACATTACACACAGTAACTCCAGTTTAACTCGATTGTTACAAGAATCACTTGGTGGAAATGCTAAACTCTCAGTAATATGTTCCATCTCCCCTCATAACAAGTACTACCTCCTTTCTTTTTTATAACTATCTTTGACACTTTTCACATATATTAAGAATAGTTAGCAATGTCATTAATGTGTACATTTTTGTGTATAAATATTACTAAATTTCGACATGTGTATATGTATTAAATTCTAACTTTCCATGACAAATTGGTAGTAATTATAAGGGATATATTTGTTTTTTTATAAGCTATATTTGGTAAAAGCTAATGAAGTATCTATTAATTTGTAAAGGTGCTTATATTTAGGGACAATATTTTTAAGAGGGGGTTTATCATTAGGGGAAAAGGTAGTATTTACCTGGATCAAAGAGCGTAGTTTGTCTGTCTATAGAGTAATACGAAAGTATTGAGTTCTAGAGATAAAGATTCAACTTTTTGATTGTAGGAGCAATGATGAAACAGTCTGCACACTCAGATTTGGGGAGAAAGTAAGATCCATTAGAAACAAGCCAATTATTAATGTAATAAACGAGGCTGACGATTTGAGTGGTAAAATCCGACACTTGAAGGTAAACTCCTGGACTTTTTAATTGAAACAGTTTTATAAGGATTAGACTGATGCAAGTCTCTGTTTTCTTTGGTTCAGGAAGAACTTATTAGAGTGAAGGCTGGTGATGTTCATAGCTCAGTTGGGGGTAAGAATGGATGCTTCCAAGGACATAACGTGCGGGAAAGCCTTAATCAGTTGAAAGTCAGCTTAAACCGTTCTATACTCCTGTCTAACTTAGATAATAATACTGGTGTAGCTGTAAATGTTGGCGAGGATGACATACAGCAATTACGCCAGCAAATCGATGAAATTAGATAGTTCATGTGAAGGGATTCCAAAATACATTTCTGTCGGTGAAAGATTGTGTTCAGTTTTTATTCTTTTGAGGAAAATTATGATGCAGACACAACCATAGGTGAAGAAAATTCTGTTGGTGATAGCATTTCAGTCATGTCATGCAGCAAATCTCCAATATTTGATGGACCAGAGTTGTCCGAGTCTCCAAAATTCAGAAATAACCAAAGGAAAAGTGTGGCTTTTTCATCGAGTTATCTAGGAAGTAGGAACAATGTTTCTGAGAGTTCAACTTTCGGGAATGACCTTTTAGGAAAATCGTTTAAACGGGGTGAGCATATGCAAACTTCATTACAGTCAGGCAAAGCTGAGTCCTTGGCAGAAAGTCTCCAGAGGGGATTACAGATAATTGATTATCACCAACAGAACTCGCCATTGAACAAATCTTCAAGCTCCTTTTCTTTTGGCCGTTTAACTTTGACACCATGTCCAGAAATCGACAAGGTTGAACCTTGTGATCAAACAATACAACAAAACATTTCTAATGATGAAGTAACTTCCACATTCCTTTGTGCATCTTGTCGTACAGATTTAACAGATAAAGTTCCAAAAGTATGTTTCAACTTAATCTCTACAAATTTCTCTTTCAAATGTATTTTTTACTGACTATTTTTCCTTCTTTCGCTCTTAAAGCATTTGGAAAATGTAAGGGCAAAAGACCAAATGAGAGAGACGGAGCTCGAGAGTGTTTGTAAGGAGCAAGCAGCTAGAATTGAGCAACTAAATCAATTGGTATTAAGATTCTGCCTTCCTGAATTATGTTTGTGGCTGGTTTCTACATTTACTGATAATGTGCATTTGTCTCCAGGTGGAGAAATTGAAAGGAGAGAAAAATATAAACTCCATTTCTGTGTTTGATGAGGGTGAAGAGTATAGCTCCATGAAGGATGAAAACAAG
Protein sequence

>MS.gene68459.t1

MLRQVVVRIRPDEKEGDLLVKKVSSDGLCVGDEQFNFDEVFDANSNQEDVFQSVGVPLVRNALTGYNTSILSYGQSGSGKTYTMWGTPSAMTEDPSCDSQQGIVPRIFRMLFSELERERLMSDQKQFSYKCRCSFLEIYNDQIGNLLNPNQQDLEIKDDSKNGFYVENLIEEYVTCYDDVAQVLIKGTTKGFNSLKASRISLIDLAGLDGDSVDNGSSQCLWENRHVKKSLSQLGLLVDALTDNSQSREDEDITHSNSSLTRLLQESLGGNAKLSEELIRVKAGDVHSSVGGKNGCFQGHNVRESLNQLKIVFSFYSFEENYDADTTIGEENSVGDSISVMSCSKSPIFDGPELSESPKFRNNQRKSVAFSSSYLGSRNNVSESSTFGNDLLGKSFKRGEHMQTSLQSGKAESLAESLQRGLQIIDYHQQNSPLNKSSSSFSFGRLTLTPCPEIDKVEPCDQTIQQNISNDEVTSTFLCASCRTDLTDKVPKHLENVRAKDQMRETELESVCKEQAARIEQLNQLVEKLKGEKNINSISVFDEGEEYSSMKDENK