Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69288.t1 | XP_003600808.1 | 96.5 | 595 | 13 | 3 | 1 | 587 | 1 | 595 | 0.00E+00 | 1085.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69288.t1 | F4K295 | 64.0 | 525 | 166 | 8 | 55 | 566 | 61 | 575 | 2.0e-178 | 627.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69288.t1 | F6LPU8 | 96.5 | 595 | 13 | 3 | 1 | 587 | 1 | 595 | 0.0e+00 | 1085.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049989 | MS.gene69288 | 0.827574 | 1.45E-54 | -1.69E-46 |
| MS.gene050297 | MS.gene69288 | 0.848413 | 6.23E-60 | -1.69E-46 |
| MS.gene052367 | MS.gene69288 | 0.821306 | 4.33E-53 | -1.69E-46 |
| MS.gene05369 | MS.gene69288 | 0.800951 | 1.13E-48 | -1.69E-46 |
| MS.gene056041 | MS.gene69288 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene058196 | MS.gene69288 | 0.80749 | 4.93E-50 | -1.69E-46 |
| MS.gene059300 | MS.gene69288 | 0.81871 | 1.70E-52 | -1.69E-46 |
| MS.gene060473 | MS.gene69288 | 0.816458 | 5.47E-52 | -1.69E-46 |
| MS.gene060565 | MS.gene69288 | 0.822149 | 2.77E-53 | -1.69E-46 |
| MS.gene06057 | MS.gene69288 | 0.807792 | 4.25E-50 | -1.69E-46 |
| MS.gene061260 | MS.gene69288 | 0.817696 | 2.88E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69288.t1 | MTR_3g069590 | 96.471 | 595 | 13 | 3 | 1 | 587 | 1 | 595 | 0.0 | 1173 |
| MS.gene69288.t1 | MTR_3g069590 | 98.840 | 431 | 5 | 0 | 1 | 431 | 1 | 431 | 0.0 | 880 |
| MS.gene69288.t1 | MTR_5g081410 | 73.469 | 539 | 128 | 6 | 47 | 579 | 32 | 561 | 0.0 | 792 |
| MS.gene69288.t1 | MTR_7g065220 | 61.690 | 509 | 173 | 6 | 55 | 557 | 144 | 636 | 0.0 | 637 |
| MS.gene69288.t1 | MTR_4g019770 | 63.443 | 424 | 148 | 2 | 71 | 491 | 64 | 483 | 0.0 | 546 |
| MS.gene69288.t1 | MTR_4g075640 | 57.238 | 449 | 175 | 5 | 95 | 531 | 82 | 525 | 1.52e-177 | 514 |
| MS.gene69288.t1 | MTR_8g030850 | 56.186 | 388 | 149 | 4 | 90 | 464 | 87 | 466 | 7.65e-143 | 422 |
| MS.gene69288.t1 | MTR_7g077690 | 51.306 | 421 | 141 | 4 | 100 | 464 | 113 | 525 | 1.55e-130 | 392 |
| MS.gene69288.t1 | MTR_6g087700 | 50.386 | 389 | 165 | 6 | 102 | 481 | 98 | 467 | 1.69e-129 | 390 |
| MS.gene69288.t1 | MTR_2g101830 | 48.500 | 400 | 187 | 4 | 65 | 463 | 51 | 432 | 1.48e-128 | 387 |
| MS.gene69288.t1 | MTR_5g025960 | 46.739 | 368 | 186 | 3 | 96 | 463 | 114 | 471 | 1.47e-109 | 339 |
| MS.gene69288.t1 | MTR_4g013165 | 46.199 | 342 | 150 | 6 | 151 | 485 | 1 | 315 | 4.55e-103 | 317 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69288.t1 | AT5G05940 | 64.381 | 525 | 164 | 10 | 55 | 566 | 61 | 575 | 0.0 | 665 |
| MS.gene69288.t1 | AT5G02010 | 68.445 | 431 | 116 | 6 | 83 | 507 | 54 | 470 | 0.0 | 608 |
| MS.gene69288.t1 | AT5G05940 | 69.737 | 380 | 107 | 3 | 55 | 431 | 61 | 435 | 0.0 | 540 |
| MS.gene69288.t1 | AT3G55660 | 55.179 | 531 | 183 | 13 | 55 | 552 | 69 | 577 | 0.0 | 535 |
| MS.gene69288.t1 | AT4G38430 | 53.862 | 479 | 194 | 6 | 32 | 505 | 40 | 496 | 2.82e-174 | 505 |
| MS.gene69288.t1 | AT3G55660 | 60.892 | 381 | 133 | 5 | 55 | 431 | 69 | 437 | 2.95e-159 | 462 |
| MS.gene69288.t1 | AT4G00460 | 52.516 | 457 | 188 | 8 | 22 | 470 | 38 | 473 | 1.16e-152 | 447 |
| MS.gene69288.t1 | AT4G00460 | 52.516 | 457 | 188 | 8 | 22 | 470 | 38 | 473 | 1.16e-152 | 447 |
| MS.gene69288.t1 | AT1G01700 | 51.422 | 457 | 200 | 7 | 17 | 464 | 36 | 479 | 3.76e-146 | 431 |
| MS.gene69288.t1 | AT1G01700 | 48.255 | 487 | 200 | 8 | 17 | 464 | 36 | 509 | 5.17e-140 | 416 |
| MS.gene69288.t1 | AT2G45890 | 52.356 | 382 | 161 | 6 | 99 | 470 | 92 | 462 | 1.04e-132 | 396 |
| MS.gene69288.t1 | AT3G24620 | 52.174 | 368 | 156 | 5 | 99 | 465 | 84 | 432 | 1.87e-130 | 392 |
| MS.gene69288.t1 | AT1G52240 | 52.575 | 369 | 152 | 5 | 101 | 468 | 105 | 451 | 2.25e-126 | 382 |
| MS.gene69288.t1 | AT4G13240 | 50.267 | 374 | 166 | 5 | 95 | 467 | 69 | 423 | 1.04e-125 | 380 |
| MS.gene69288.t1 | AT1G01700 | 48.966 | 435 | 193 | 8 | 17 | 435 | 36 | 457 | 1.58e-124 | 375 |
| MS.gene69288.t1 | AT4G00460 | 55.718 | 341 | 136 | 5 | 137 | 470 | 8 | 340 | 1.29e-123 | 368 |
| MS.gene69288.t1 | AT1G79860 | 48.501 | 367 | 168 | 5 | 98 | 463 | 90 | 436 | 2.13e-121 | 369 |
| MS.gene69288.t1 | AT5G19560 | 48.919 | 370 | 171 | 4 | 99 | 467 | 43 | 395 | 4.55e-119 | 362 |
| MS.gene69288.t1 | AT5G19560 | 48.919 | 370 | 171 | 4 | 99 | 467 | 43 | 395 | 4.55e-119 | 362 |
| MS.gene69288.t1 | AT3G16130 | 49.867 | 377 | 163 | 6 | 97 | 468 | 87 | 442 | 9.01e-119 | 362 |
| MS.gene69288.t1 | AT5G19560 | 48.919 | 370 | 171 | 4 | 99 | 467 | 62 | 414 | 1.19e-118 | 361 |
| MS.gene69288.t1 | AT5G19560 | 47.305 | 334 | 158 | 4 | 99 | 431 | 62 | 378 | 2.27e-102 | 315 |
| MS.gene69288.t1 | AT1G31650 | 42.507 | 367 | 202 | 2 | 100 | 466 | 108 | 465 | 4.17e-100 | 315 |
| MS.gene69288.t1 | AT1G31650 | 42.507 | 367 | 202 | 2 | 100 | 466 | 136 | 493 | 2.39e-99 | 313 |
| MS.gene69288.t1 | AT4G00460 | 51.780 | 309 | 130 | 6 | 22 | 326 | 38 | 331 | 1.20e-93 | 291 |
| MS.gene69288.t1 | AT1G01700 | 50.831 | 301 | 138 | 4 | 17 | 312 | 36 | 331 | 6.82e-88 | 277 |
| MS.gene69288.t1 | AT1G01700 | 50.831 | 301 | 138 | 4 | 17 | 312 | 36 | 331 | 6.82e-88 | 277 |
| MS.gene69288.t1 | AT5G19560 | 46.403 | 278 | 131 | 4 | 191 | 467 | 5 | 265 | 8.77e-80 | 256 |
Find 124 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAAGTTCCTGAGTCATATT+TGG | 0.209473 | 3.2:-63388185 | MS.gene69288:CDS |
| GTTTCACAGCTACAGAATTT+TGG | 0.237624 | 3.2:-63388426 | MS.gene69288:CDS |
| CCGAATTTCACAGCATTTAG+AGG | 0.271027 | 3.2:+63386805 | None:intergenic |
| CAGCATTGCTTTGGCTGAAA+TGG | 0.280188 | 3.2:-63388206 | MS.gene69288:CDS |
| TTCTGCAGGTAATGACTTGC+AGG | 0.301595 | 3.2:-63388633 | MS.gene69288:intron |
| GAACATGTAGCTACTGCATT+TGG | 0.303375 | 3.2:-63388888 | MS.gene69288:intron |
| GGAGTTCTCTCCCCTCTTAC+AGG | 0.304069 | 3.2:+63387006 | None:intergenic |
| AGAAAGCTACTCTAGAGTTT+TGG | 0.305551 | 3.2:-63387229 | MS.gene69288:CDS |
| TTGTTGAATTAATACCTTCT+TGG | 0.307496 | 3.2:-63388776 | MS.gene69288:CDS |
| GTTGTTGAACGGTTGGGATT+AGG | 0.312713 | 3.2:+63387519 | None:intergenic |
| GCTTCGGGAACACGGGGAAC+GGG | 0.327886 | 3.2:+63388313 | None:intergenic |
| CTTGTTGCATTGGATCTTGC+TGG | 0.334600 | 3.2:+63387362 | None:intergenic |
| GTTAAGGACTTCATGCTTGA+TGG | 0.349943 | 3.2:-63387477 | MS.gene69288:CDS |
| AAACCTCAGCGTCGCGGCTT+TGG | 0.359263 | 3.2:-63386937 | MS.gene69288:CDS |
| CCTGAGACAGACACTGAAAA+TGG | 0.361705 | 3.2:+63387090 | None:intergenic |
| ACAGACAAAATGTACAACTA+TGG | 0.372300 | 3.2:-63390142 | MS.gene69288:CDS |
| CTTCTCACTGAGACCTGCTT+CGG | 0.374692 | 3.2:+63388297 | None:intergenic |
| CCTCTAAATGCTGTGAAATT+CGG | 0.375055 | 3.2:-63386805 | MS.gene69288:CDS |
| CTACTGCATTTGGGCAACTT+TGG | 0.383497 | 3.2:-63388878 | MS.gene69288:CDS |
| AAAAGGGGTTTGCACTGCTT+TGG | 0.392592 | 3.2:-63389682 | MS.gene69288:CDS |
| ACCTCAAGTTTCTTTCCATC+AGG | 0.394767 | 3.2:+63388744 | None:intergenic |
| AGAGCTTTGTCAAATTATCT+TGG | 0.407039 | 3.2:-63386907 | MS.gene69288:CDS |
| GGTGAAGATATGTCAGGTTC+AGG | 0.410078 | 3.2:-63389705 | MS.gene69288:CDS |
| GAAAGTGTAGCTTTGAGAAT+AGG | 0.415827 | 3.2:+63390231 | None:intergenic |
| TTCTCACTGAGACCTGCTTC+GGG | 0.416408 | 3.2:+63388298 | None:intergenic |
| GTTCAACAACAAAGTCTTCA+TGG | 0.416873 | 3.2:-63387506 | MS.gene69288:CDS |
| GTCTATCAACAGCATTGCTT+TGG | 0.420189 | 3.2:-63388215 | MS.gene69288:CDS |
| TGGAAGCTGCTATTTATCTA+TGG | 0.429701 | 3.2:-63387569 | MS.gene69288:CDS |
| GACTTTGTTGTTGAACGGTT+GGG | 0.430067 | 3.2:+63387513 | None:intergenic |
| AGCTGCTGATTCAGAAGGTT+CGG | 0.432788 | 3.2:-63388383 | MS.gene69288:CDS |
| TCCTTGAAGCATCGGTTCCC+TGG | 0.436072 | 3.2:-63387408 | MS.gene69288:CDS |
| GTTCCCCGTGTTCCCGAAGC+AGG | 0.436453 | 3.2:-63388310 | MS.gene69288:CDS |
| AACATGTAGCTACTGCATTT+GGG | 0.437715 | 3.2:-63388887 | MS.gene69288:intron |
| ACTCAAACATTTCAGGATGT+TGG | 0.439334 | 3.2:-63387264 | MS.gene69288:intron |
| GAAGTTGAAGCTAAATCAAA+TGG | 0.440177 | 3.2:-63390270 | MS.gene69288:CDS |
| GGTTCCTACAACGGGTAATA+CGG | 0.441368 | 3.2:-63387121 | MS.gene69288:CDS |
| AATGCCATTACTAATCTTTG+TGG | 0.444234 | 3.2:-63389651 | MS.gene69288:intron |
| TGCTTCGGGAACACGGGGAA+CGG | 0.446615 | 3.2:+63388312 | None:intergenic |
| GAATTGGAACCTTGTTGCAT+TGG | 0.446692 | 3.2:+63387352 | None:intergenic |
| TTATCGAGTTTGCGAAGGGC+TGG | 0.449399 | 3.2:+63388583 | None:intergenic |
| GATATGTCAGGTTCAGGAAA+AGG | 0.450921 | 3.2:-63389699 | MS.gene69288:CDS |
| TCTTTCTTCTCACAAGGTAG+TGG | 0.451314 | 3.2:+63388846 | None:intergenic |
| TCAGGAAATGTTTGCCAAGA+AGG | 0.453625 | 3.2:+63388762 | None:intergenic |
| AAATCAAATGGTACTCCTCT+TGG | 0.453653 | 3.2:-63390258 | MS.gene69288:CDS |
| GCCAGGGAACCGATGCTTCA+AGG | 0.461493 | 3.2:+63387407 | None:intergenic |
| TTCTAAGTTCCTTGAAGCAT+CGG | 0.472432 | 3.2:-63387416 | MS.gene69288:CDS |
| ACTCCACACAAAGCACCATT+TGG | 0.474333 | 3.2:-63387066 | MS.gene69288:CDS |
| ATATGTCAGGTTCAGGAAAA+GGG | 0.474996 | 3.2:-63389698 | MS.gene69288:CDS |
| TTTGCATTGGTTCCTACAAC+GGG | 0.475749 | 3.2:-63387129 | MS.gene69288:CDS |
| GTTGATGCAAATATCTGTCC+TGG | 0.487154 | 3.2:+63388609 | None:intergenic |
| AGAAATGTGGCAAAGAGAGA+TGG | 0.490084 | 3.2:-63388826 | MS.gene69288:CDS |
| CCATTGATTAGTCCTGTAAG+AGG | 0.490411 | 3.2:-63387018 | MS.gene69288:CDS |
| ACTATGGATGTAAAAGTCTC+AGG | 0.493058 | 3.2:-63390126 | MS.gene69288:intron |
| TCTTGGCAAACATTTCCTGA+TGG | 0.512838 | 3.2:-63388759 | MS.gene69288:CDS |
| CTGAATTGACTTGCGAAAAG+AGG | 0.513814 | 3.2:+63388360 | None:intergenic |
| ACATTCAGATAGATTTGCAT+TGG | 0.514397 | 3.2:-63387142 | MS.gene69288:CDS |
| AAGGTAGTTTGAGTTAAGCC+AGG | 0.520536 | 3.2:+63387390 | None:intergenic |
| GAAAACTTAGGCGTGCCAAA+TGG | 0.520603 | 3.2:+63387051 | None:intergenic |
| CTTCGGGAACACGGGGAACG+GGG | 0.523029 | 3.2:+63388314 | None:intergenic |
| CACATTTCTTTCTTCTCACA+AGG | 0.525180 | 3.2:+63388840 | None:intergenic |
| GAGACCTGCTTCGGGAACAC+GGG | 0.529025 | 3.2:+63388306 | None:intergenic |
| AGATTTGCAAAATTGTTGCT+AGG | 0.530179 | 3.2:-63389726 | MS.gene69288:CDS |
| TTCAACAACAAAGTCTTCAT+GGG | 0.530559 | 3.2:-63387505 | MS.gene69288:CDS |
| TTGCTAGGTGAAGATATGTC+AGG | 0.530876 | 3.2:-63389711 | MS.gene69288:CDS |
| TGAGACCTGCTTCGGGAACA+CGG | 0.534669 | 3.2:+63388305 | None:intergenic |
| TTGGATCTTGCTGGTATCCA+AGG | 0.534759 | 3.2:+63387371 | None:intergenic |
| ACACAAATCAAACATGGAAG+TGG | 0.543391 | 3.2:-63390166 | MS.gene69288:CDS |
| CGAGTTTGCGAAGGGCTGGA+AGG | 0.544385 | 3.2:+63388587 | None:intergenic |
| GGACTAATCAATGGCACAGA+AGG | 0.548607 | 3.2:+63387027 | None:intergenic |
| AGGTAATGACTTGCAGGCCC+AGG | 0.549183 | 3.2:-63388627 | MS.gene69288:CDS |
| TTGTTGTTGTTGTGGAGGAA+AGG | 0.550030 | 3.2:+63386985 | None:intergenic |
| TGGCTTAACTCAAACTACCT+TGG | 0.552224 | 3.2:-63387388 | MS.gene69288:CDS |
| CATACCACAAAGATTAGTAA+TGG | 0.555497 | 3.2:+63389647 | None:intergenic |
| CCTCTTACAGGACTAATCAA+TGG | 0.560425 | 3.2:+63387018 | None:intergenic |
| CAGAATGGAAGAACTTGCCT+CGG | 0.562732 | 3.2:-63387699 | MS.gene69288:CDS |
| ATTTGCATTGGTTCCTACAA+CGG | 0.562888 | 3.2:-63387130 | MS.gene69288:CDS |
| AGACTTTGTTGTTGAACGGT+TGG | 0.563933 | 3.2:+63387512 | None:intergenic |
| TGGGATTAGGCGTTGATCTG+TGG | 0.563972 | 3.2:+63387532 | None:intergenic |
| CATTGATTAGTCCTGTAAGA+GGG | 0.566090 | 3.2:-63387017 | MS.gene69288:CDS |
| GGCAATTCAACTGAGGTCAA+TGG | 0.576601 | 3.2:-63386859 | MS.gene69288:CDS |
| GAAACCGTATTACCCGTTGT+AGG | 0.578024 | 3.2:+63387117 | None:intergenic |
| AACAGATGTTGATATGATGA+AGG | 0.579015 | 3.2:-63389751 | MS.gene69288:intron |
| GCATGTTATCGAGTTTGCGA+AGG | 0.584286 | 3.2:+63388578 | None:intergenic |
| ATTGTAGCTGCTGATTCAGA+AGG | 0.586893 | 3.2:-63388388 | MS.gene69288:CDS |
| ATTGATCGGATGTGATGTAT+CGG | 0.589502 | 3.2:+63387664 | None:intergenic |
| CAAATGGTACTCCTCTTGGT+TGG | 0.592121 | 3.2:-63390254 | MS.gene69288:CDS |
| ATATTTGGAAACCCTCCCTA+AGG | 0.594797 | 3.2:-63388170 | MS.gene69288:intron |
| CATGTTATCGAGTTTGCGAA+GGG | 0.595448 | 3.2:+63388579 | None:intergenic |
| TATGTCAGGTTCAGGAAAAG+GGG | 0.595512 | 3.2:-63389697 | MS.gene69288:CDS |
| GGCACAGAAGGCGAAAACTT+AGG | 0.596415 | 3.2:+63387039 | None:intergenic |
| TTGATGCAAATATCTGTCCT+GGG | 0.598206 | 3.2:+63388610 | None:intergenic |
| TGTGGCAAAGAGAGATGGAA+TGG | 0.599356 | 3.2:-63388821 | MS.gene69288:CDS |
| ATGAAGACTTTGTTGTTGAA+CGG | 0.600425 | 3.2:+63387508 | None:intergenic |
| AGGGTTTCCAAATATGACTC+AGG | 0.603777 | 3.2:+63388178 | None:intergenic |
| AGAGGTCTAAACAATCAAGT+AGG | 0.606917 | 3.2:+63387628 | None:intergenic |
| TCTAGAACTACAAGTTTCAG+TGG | 0.607091 | 3.2:-63390324 | MS.gene69288:CDS |
| AGGTAGTTTGAGTTAAGCCA+GGG | 0.610626 | 3.2:+63387391 | None:intergenic |
| GCACTCTGAGGAGAATTGAT+CGG | 0.617379 | 3.2:+63387650 | None:intergenic |
| TTGAAGTGAGACCTTAGGGA+GGG | 0.617736 | 3.2:+63388159 | None:intergenic |
| CATCGATGATTTGTTATACG+TGG | 0.621178 | 3.2:-63387178 | MS.gene69288:CDS |
| ACACCAAAGCCGCGACGCTG+AGG | 0.624563 | 3.2:+63386934 | None:intergenic |
| AGCGGCAAGAAGAGAAGTGG+TGG | 0.627026 | 3.2:-63388339 | MS.gene69288:CDS |
| TTCAGCGGCAAGAAGAGAAG+TGG | 0.628274 | 3.2:-63388342 | MS.gene69288:CDS |
| CAGCAAGATCCAATGCAACA+AGG | 0.629004 | 3.2:-63387361 | MS.gene69288:intron |
| TCCTGATGGAAAGAAACTTG+AGG | 0.634337 | 3.2:-63388745 | MS.gene69288:intron |
| AGACCTGCTTCGGGAACACG+GGG | 0.636721 | 3.2:+63388307 | None:intergenic |
| GTGCAATATGTTCAGAAGAG+AGG | 0.640548 | 3.2:+63387610 | None:intergenic |
| TCAACAACAAAGTCTTCATG+GGG | 0.642077 | 3.2:-63387504 | MS.gene69288:CDS |
| AAACAAACACAAATCAAACA+TGG | 0.647874 | 3.2:-63390172 | MS.gene69288:CDS |
| ATTGATTAGTCCTGTAAGAG+GGG | 0.657034 | 3.2:-63387016 | MS.gene69288:CDS |
| AGCAATGCTGTTGATAGACA+TGG | 0.660827 | 3.2:+63388219 | None:intergenic |
| GAGACTAAAACAAAGACATG+TGG | 0.664012 | 3.2:-63386880 | MS.gene69288:CDS |
| GTGCCAAATGGTGCTTTGTG+TGG | 0.665179 | 3.2:+63387063 | None:intergenic |
| CTTGTGAGAAGAAAGAAATG+TGG | 0.666461 | 3.2:-63388839 | MS.gene69288:CDS |
| ACAATCAAGTAGGCACTCTG+AGG | 0.672020 | 3.2:+63387638 | None:intergenic |
| AACGTCAAACCTCAGCGTCG+CGG | 0.676876 | 3.2:-63386943 | MS.gene69288:CDS |
| TTCTGAAGTAGAAATTGACG+AGG | 0.692550 | 3.2:+63390290 | None:intergenic |
| TTTGAAGTGAGACCTTAGGG+AGG | 0.702854 | 3.2:+63388158 | None:intergenic |
| ATCGGTAAATAAAATCTCCG+AGG | 0.703369 | 3.2:+63387682 | None:intergenic |
| TTGAGAATAGGCCAACCAAG+AGG | 0.709258 | 3.2:+63390243 | None:intergenic |
| GACATGTGGCAATTCAACTG+AGG | 0.716254 | 3.2:-63386866 | MS.gene69288:CDS |
| GATAAATAGCAGCTTCCACG+CGG | 0.742607 | 3.2:+63387574 | None:intergenic |
| ACTCGAGATTGCGAACCGCG+TGG | 0.758442 | 3.2:-63387589 | MS.gene69288:CDS |
| CAACAACAAAGTCTTCATGG+GGG | 0.782931 | 3.2:-63387503 | MS.gene69288:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTCTTTTTTTTTTTTTTT+TGG | - | chr3.2:63387424-63387443 | MS.gene69288:CDS | 10.0% |
| !! | GATATATAATTGTATAGAAT+TGG | + | chr3.2:63389870-63389889 | None:intergenic | 15.0% |
| !! | TATGTGAATTATTATGATTA+TGG | - | chr3.2:63388529-63388548 | MS.gene69288:intron | 15.0% |
| !! | TATTTATCTTAGTCATAAAA+TGG | + | chr3.2:63389102-63389121 | None:intergenic | 15.0% |
| !!! | ATTGAAATCAATTTTTGTTA+CGG | - | chr3.2:63388237-63388256 | MS.gene69288:CDS | 15.0% |
| !!! | ATTTTATGACTAAGATAAAT+AGG | - | chr3.2:63389101-63389120 | MS.gene69288:intron | 15.0% |
| !!! | GTTTTATTCTGTAATTAAAT+TGG | - | chr3.2:63387320-63387339 | MS.gene69288:intron | 15.0% |
| !!! | TTTTATGACTAAGATAAATA+GGG | - | chr3.2:63389102-63389121 | MS.gene69288:intron | 15.0% |
| !! | AAAATGTGTCAATGTTAAAA+AGG | + | chr3.2:63389919-63389938 | None:intergenic | 20.0% |
| !! | AAAATTTGTCAACTACAATA+TGG | + | chr3.2:63387597-63387616 | None:intergenic | 20.0% |
| !! | TATTCTGTAATTAAATTGGT+TGG | - | chr3.2:63387324-63387343 | MS.gene69288:intron | 20.0% |
| !!! | AATATCTATTTGAGTTGATT+AGG | - | chr3.2:63387754-63387773 | MS.gene69288:intron | 20.0% |
| !!! | TAAAATTGATTTTGACATGT+TGG | - | chr3.2:63387729-63387748 | MS.gene69288:intron | 20.0% |
| !!! | TAATTATGTGTTTCTTTTCA+TGG | - | chr3.2:63387676-63387695 | MS.gene69288:CDS | 20.0% |
| !!! | TTACATTTTGTTTTAACACA+GGG | - | chr3.2:63388743-63388762 | MS.gene69288:intron | 20.0% |
| !!! | TTTACATTTTGTTTTAACAC+AGG | - | chr3.2:63388742-63388761 | MS.gene69288:intron | 20.0% |
| ! | AAACAAACACAAATCAAACA+TGG | - | chr3.2:63387031-63387050 | MS.gene69288:CDS | 25.0% |
| ! | AAAGAAACTTGAGGTAAATT+TGG | - | chr3.2:63388467-63388486 | MS.gene69288:intron | 25.0% |
| ! | AACCATTAATTTAGATCGAA+TGG | - | chr3.2:63389218-63389237 | MS.gene69288:intron | 25.0% |
| ! | AACCATTCGATCTAAATTAA+TGG | + | chr3.2:63389223-63389242 | None:intergenic | 25.0% |
| ! | AACTCTCAAAAGAAAAAAGA+TGG | - | chr3.2:63386819-63386838 | MS.gene69288:CDS | 25.0% |
| ! | ACTCTCAAAAGAAAAAAGAT+GGG | - | chr3.2:63386820-63386839 | MS.gene69288:CDS | 25.0% |
| ! | ATTCCAAAAGAATGATAGTT+TGG | + | chr3.2:63387909-63387928 | None:intergenic | 25.0% |
| ! | GTCTTTCTATATGAAATCAA+TGG | + | chr3.2:63389159-63389178 | None:intergenic | 25.0% |
| ! | TCTTAGTCATAAAATGGAAT+AGG | + | chr3.2:63389096-63389115 | None:intergenic | 25.0% |
| ! | TGAAATGATAGTTTCAACAT+TGG | + | chr3.2:63388507-63388526 | None:intergenic | 25.0% |
| ! | TGTTATTAATGTCAAAAGGA+TGG | - | chr3.2:63388091-63388110 | MS.gene69288:intron | 25.0% |
| ! | TTAAGTGTTAAAAACACGTT+TGG | + | chr3.2:63387828-63387847 | None:intergenic | 25.0% |
| ! | TTCATGTAAAAGTGAATTGA+AGG | + | chr3.2:63388163-63388182 | None:intergenic | 25.0% |
| ! | TTCTTCCATTCTGTAAATAA+GGG | + | chr3.2:63389497-63389516 | None:intergenic | 25.0% |
| ! | TTGTTGAATTAATACCTTCT+TGG | - | chr3.2:63388427-63388446 | MS.gene69288:CDS | 25.0% |
| !! | ACATTTTACTCAAACATTTC+AGG | - | chr3.2:63389932-63389951 | MS.gene69288:intron | 25.0% |
| !! | GTAGTTGACAAATTTTCTTT+TGG | - | chr3.2:63387601-63387620 | MS.gene69288:CDS | 25.0% |
| !! | TGATTATGGTGTTTCTAATA+CGG | - | chr3.2:63388543-63388562 | MS.gene69288:intron | 25.0% |
| !!! | ATGGTGTTATTAATGTCAAA+AGG | - | chr3.2:63388087-63388106 | MS.gene69288:intron | 25.0% |
| !!! | TTCTTTTGGTTTGTTTAAGT+TGG | - | chr3.2:63387615-63387634 | MS.gene69288:CDS | 25.0% |
| AACAGATGTTGATATGATGA+AGG | - | chr3.2:63387452-63387471 | MS.gene69288:CDS | 30.0% | |
| AATGCCATTACTAATCTTTG+TGG | - | chr3.2:63387552-63387571 | MS.gene69288:CDS | 30.0% | |
| ACAGACAAAATGTACAACTA+TGG | - | chr3.2:63387061-63387080 | MS.gene69288:CDS | 30.0% | |
| ACATTCAGATAGATTTGCAT+TGG | - | chr3.2:63390061-63390080 | MS.gene69288:intron | 30.0% | |
| AGATTTGCAAAATTGTTGCT+AGG | - | chr3.2:63387477-63387496 | MS.gene69288:CDS | 30.0% | |
| CATACAACTTACTGTTTGTT+TGG | + | chr3.2:63388268-63388287 | None:intergenic | 30.0% | |
| CATACCACAAAGATTAGTAA+TGG | + | chr3.2:63387559-63387578 | None:intergenic | 30.0% | |
| GAAGTTGAAGCTAAATCAAA+TGG | - | chr3.2:63386933-63386952 | MS.gene69288:CDS | 30.0% | |
| GGAATAGGCTATAGAAAAAA+AGG | + | chr3.2:63389081-63389100 | None:intergenic | 30.0% | |
| GTTCTTCCATTCTGTAAATA+AGG | + | chr3.2:63389498-63389517 | None:intergenic | 30.0% | |
| TAATTTAGATCGAATGGTTG+AGG | - | chr3.2:63389224-63389243 | MS.gene69288:intron | 30.0% | |
| TGTCCAATCAAAAAAAAGAG+TGG | + | chr3.2:63387946-63387965 | None:intergenic | 30.0% | |
| TTAACTAGAAAACATTGCAC+AGG | + | chr3.2:63389405-63389424 | None:intergenic | 30.0% | |
| TTCAACAACAAAGTCTTCAT+GGG | - | chr3.2:63389698-63389717 | MS.gene69288:CDS | 30.0% | |
| TTGTAAAAGTGAGTTCAATG+TGG | + | chr3.2:63388207-63388226 | None:intergenic | 30.0% | |
| ! | AGAGCTTTGTCAAATTATCT+TGG | - | chr3.2:63390296-63390315 | MS.gene69288:CDS | 30.0% |
| ! | ATATGCCCTTATTTACAGAA+TGG | - | chr3.2:63389489-63389508 | MS.gene69288:intron | 30.0% |
| ! | ATGTGTTTCTTTTCATGGTA+AGG | - | chr3.2:63387681-63387700 | MS.gene69288:CDS | 30.0% |
| ! | GTACCAAACTATCATTCTTT+TGG | - | chr3.2:63387903-63387922 | MS.gene69288:intron | 30.0% |
| ! | TATCGAATCTTGTTCTTTTG+TGG | - | chr3.2:63388658-63388677 | MS.gene69288:intron | 30.0% |
| ! | TGTTATTGTTGTTGTTGTTG+TGG | + | chr3.2:63390229-63390248 | None:intergenic | 30.0% |
| ! | TGTTCTGTTTTCTTGTTACT+TGG | + | chr3.2:63390377-63390396 | None:intergenic | 30.0% |
| !! | ATGAAGACTTTGTTGTTGAA+CGG | + | chr3.2:63389698-63389717 | None:intergenic | 30.0% |
| !! | GAATTTTGGTATGTTGATCA+AGG | - | chr3.2:63388791-63388810 | MS.gene69288:CDS | 30.0% |
| !! | GTTCTGTTTTCTTGTTACTT+GGG | + | chr3.2:63390376-63390395 | None:intergenic | 30.0% |
| !!! | CTACCACTCTTTTTTTTGAT+TGG | - | chr3.2:63387940-63387959 | MS.gene69288:intron | 30.0% |
| AAAGTGAGTTCAATGTGGAA+TGG | + | chr3.2:63388202-63388221 | None:intergenic | 35.0% | |
| AAATCAAATGGTACTCCTCT+TGG | - | chr3.2:63386945-63386964 | MS.gene69288:CDS | 35.0% | |
| AACATGTAGCTACTGCATTT+GGG | - | chr3.2:63388316-63388335 | MS.gene69288:CDS | 35.0% | |
| AATGTAGGTACAGATAACCA+AGG | + | chr3.2:63389332-63389351 | None:intergenic | 35.0% | |
| ACACAAATCAAACATGGAAG+TGG | - | chr3.2:63387037-63387056 | MS.gene69288:CDS | 35.0% | |
| ACTATGGATGTAAAAGTCTC+AGG | - | chr3.2:63387077-63387096 | MS.gene69288:CDS | 35.0% | |
| ACTCAAACATTTCAGGATGT+TGG | - | chr3.2:63389939-63389958 | MS.gene69288:intron | 35.0% | |
| AGAGGTCTAAACAATCAAGT+AGG | + | chr3.2:63389578-63389597 | None:intergenic | 35.0% | |
| AGTCATAAAAAAGTCGTGAG+TGG | + | chr3.2:63387861-63387880 | None:intergenic | 35.0% | |
| ATACCAATACCATCATGTCT+AGG | - | chr3.2:63387995-63388014 | MS.gene69288:intron | 35.0% | |
| ATATGTCAGGTTCAGGAAAA+GGG | - | chr3.2:63387505-63387524 | MS.gene69288:CDS | 35.0% | |
| ATCGGTAAATAAAATCTCCG+AGG | + | chr3.2:63389524-63389543 | None:intergenic | 35.0% | |
| ATCTCATACACCTATTCATC+AGG | + | chr3.2:63389289-63389308 | None:intergenic | 35.0% | |
| ATGAGATTCAGTACACACTT+AGG | - | chr3.2:63389302-63389321 | MS.gene69288:intron | 35.0% | |
| ATGTCAAAAGGATGGTAGTT+TGG | - | chr3.2:63388099-63388118 | MS.gene69288:intron | 35.0% | |
| ATTGATCGGATGTGATGTAT+CGG | + | chr3.2:63389542-63389561 | None:intergenic | 35.0% | |
| CAAAAAAAGAGTGGTGGTAA+TGG | - | chr3.2:63388068-63388087 | MS.gene69288:intron | 35.0% | |
| CACATTTCTTTCTTCTCACA+AGG | + | chr3.2:63388366-63388385 | None:intergenic | 35.0% | |
| CCTCTAAATGCTGTGAAATT+CGG | - | chr3.2:63390398-63390417 | MS.gene69288:CDS | 35.0% | |
| CTATATGACACAATTACTGC+AGG | - | chr3.2:63389254-63389273 | MS.gene69288:intron | 35.0% | |
| CTTGTGAGAAGAAAGAAATG+TGG | - | chr3.2:63388364-63388383 | MS.gene69288:CDS | 35.0% | |
| GAAACATGTTCCTGATGAAT+AGG | - | chr3.2:63389276-63389295 | MS.gene69288:intron | 35.0% | |
| GAGACTAAAACAAAGACATG+TGG | - | chr3.2:63390323-63390342 | MS.gene69288:CDS | 35.0% | |
| GTGTCCAATCAAAAAAAGAG+TGG | - | chr3.2:63388059-63388078 | MS.gene69288:intron | 35.0% | |
| GTTCAACAACAAAGTCTTCA+TGG | - | chr3.2:63389697-63389716 | MS.gene69288:CDS | 35.0% | |
| TCAACAACAAAGTCTTCATG+GGG | - | chr3.2:63389699-63389718 | MS.gene69288:CDS | 35.0% | |
| TCCAATCAAAAAAAGAGTGG+TGG | - | chr3.2:63388062-63388081 | MS.gene69288:intron | 35.0% | |
| TTCTAAGTTCCTTGAAGCAT+CGG | - | chr3.2:63389787-63389806 | MS.gene69288:intron | 35.0% | |
| TTGATGCAAATATCTGTCCT+GGG | + | chr3.2:63388596-63388615 | None:intergenic | 35.0% | |
| ! | ATGTTTGAAGTGAGACCTTA+GGG | + | chr3.2:63389051-63389070 | None:intergenic | 35.0% |
| ! | ATTGATTAGTCCTGTAAGAG+GGG | - | chr3.2:63390187-63390206 | MS.gene69288:CDS | 35.0% |
| ! | CATTGATTAGTCCTGTAAGA+GGG | - | chr3.2:63390186-63390205 | MS.gene69288:CDS | 35.0% |
| ! | GTTTCACAGCTACAGAATTT+TGG | - | chr3.2:63388777-63388796 | MS.gene69288:CDS | 35.0% |
| ! | TATGTTTGAAGTGAGACCTT+AGG | + | chr3.2:63389052-63389071 | None:intergenic | 35.0% |
| ! | TATTGTTGTTGTTGTTGTGG+AGG | + | chr3.2:63390226-63390245 | None:intergenic | 35.0% |
| ! | TCTAGAACTACAAGTTTCAG+TGG | - | chr3.2:63386879-63386898 | MS.gene69288:CDS | 35.0% |
| ! | TGGAAGCTGCTATTTATCTA+TGG | - | chr3.2:63389634-63389653 | MS.gene69288:intron | 35.0% |
| !! | ATTTGCATTGGTTCCTACAA+CGG | - | chr3.2:63390073-63390092 | MS.gene69288:intron | 35.0% |
| !! | CATCGATGATTTGTTATACG+TGG | - | chr3.2:63390025-63390044 | MS.gene69288:intron | 35.0% |
| !! | GAAAGTGTAGCTTTGAGAAT+AGG | + | chr3.2:63386975-63386994 | None:intergenic | 35.0% |
| !! | TGGTTTGTTTAAGTTGGCAA+AGG | - | chr3.2:63387621-63387640 | MS.gene69288:CDS | 35.0% |
| !! | TTCTGAAGTAGAAATTGACG+AGG | + | chr3.2:63386916-63386935 | None:intergenic | 35.0% |
| !!! | ACCACCACTCTTTTTTTGAT+TGG | + | chr3.2:63388066-63388085 | None:intergenic | 35.0% |
| !!! | AGAAAGCTACTCTAGAGTTT+TGG | - | chr3.2:63389974-63389993 | MS.gene69288:intron | 35.0% |
| ACCTCAAGTTTCTTTCCATC+AGG | + | chr3.2:63388462-63388481 | None:intergenic | 40.0% | |
| ACTAGAAAACATTGCACAGG+AGG | + | chr3.2:63389402-63389421 | None:intergenic | 40.0% | |
| AGAAATGTGGCAAAGAGAGA+TGG | - | chr3.2:63388377-63388396 | MS.gene69288:CDS | 40.0% | |
| AGGGTTTCCAAATATGACTC+AGG | + | chr3.2:63389028-63389047 | None:intergenic | 40.0% | |
| ATATTTGGAAACCCTCCCTA+AGG | - | chr3.2:63389033-63389052 | MS.gene69288:intron | 40.0% | |
| CAACAACAAAGTCTTCATGG+GGG | - | chr3.2:63389700-63389719 | MS.gene69288:CDS | 40.0% | |
| CAATACCATCATGTCTAGGA+TGG | - | chr3.2:63387999-63388018 | MS.gene69288:intron | 40.0% | |
| CAATACCATCCTAGACATGA+TGG | + | chr3.2:63388007-63388026 | None:intergenic | 40.0% | |
| CATCCTAGACATGATGGTAT+TGG | + | chr3.2:63388001-63388020 | None:intergenic | 40.0% | |
| CATGTTATCGAGTTTGCGAA+GGG | + | chr3.2:63388627-63388646 | None:intergenic | 40.0% | |
| CCGAATTTCACAGCATTTAG+AGG | + | chr3.2:63390401-63390420 | None:intergenic | 40.0% | |
| CCTCTTACAGGACTAATCAA+TGG | + | chr3.2:63390188-63390207 | None:intergenic | 40.0% | |
| GAACATGTAGCTACTGCATT+TGG | - | chr3.2:63388315-63388334 | MS.gene69288:CDS | 40.0% | |
| GAATTGGAACCTTGTTGCAT+TGG | + | chr3.2:63389854-63389873 | None:intergenic | 40.0% | |
| GATATGTCAGGTTCAGGAAA+AGG | - | chr3.2:63387504-63387523 | MS.gene69288:CDS | 40.0% | |
| GGAAGTTCCTGAGTCATATT+TGG | - | chr3.2:63389018-63389037 | MS.gene69288:intron | 40.0% | |
| GTACACACTTAGGTATACCT+TGG | - | chr3.2:63389312-63389331 | MS.gene69288:intron | 40.0% | |
| GTCTATCAACAGCATTGCTT+TGG | - | chr3.2:63388988-63389007 | MS.gene69288:intron | 40.0% | |
| GTGCAATATGTTCAGAAGAG+AGG | + | chr3.2:63389596-63389615 | None:intergenic | 40.0% | |
| GTTAAGGACTTCATGCTTGA+TGG | - | chr3.2:63389726-63389745 | MS.gene69288:CDS | 40.0% | |
| GTTGATGCAAATATCTGTCC+TGG | + | chr3.2:63388597-63388616 | None:intergenic | 40.0% | |
| TATGTCAGGTTCAGGAAAAG+GGG | - | chr3.2:63387506-63387525 | MS.gene69288:CDS | 40.0% | |
| TCAGGAAATGTTTGCCAAGA+AGG | + | chr3.2:63388444-63388463 | None:intergenic | 40.0% | |
| TCCTGATGGAAAGAAACTTG+AGG | - | chr3.2:63388458-63388477 | MS.gene69288:intron | 40.0% | |
| TCTAATACGGTTCATTCTGC+AGG | - | chr3.2:63388556-63388575 | MS.gene69288:intron | 40.0% | |
| TCTTGGCAAACATTTCCTGA+TGG | - | chr3.2:63388444-63388463 | MS.gene69288:intron | 40.0% | |
| TCTTTCTTCTCACAAGGTAG+TGG | + | chr3.2:63388360-63388379 | None:intergenic | 40.0% | |
| TGGCTTAACTCAAACTACCT+TGG | - | chr3.2:63389815-63389834 | MS.gene69288:intron | 40.0% | |
| TGTCAGACACTAACAAGTGT+CGG | + | chr3.2:63387173-63387192 | None:intergenic | 40.0% | |
| TGTGCACTTGCAAAGAATGT+AGG | + | chr3.2:63389347-63389366 | None:intergenic | 40.0% | |
| TTGCTAGGTGAAGATATGTC+AGG | - | chr3.2:63387492-63387511 | MS.gene69288:CDS | 40.0% | |
| ! | AAGGTAGTTTGAGTTAAGCC+AGG | + | chr3.2:63389816-63389835 | None:intergenic | 40.0% |
| ! | AGCAATGCTGTTGATAGACA+TGG | + | chr3.2:63388987-63389006 | None:intergenic | 40.0% |
| ! | AGGTAGTTTGAGTTAAGCCA+GGG | + | chr3.2:63389815-63389834 | None:intergenic | 40.0% |
| ! | ATGTATGTGTCGGTCTTCAT+AGG | - | chr3.2:63387279-63387298 | MS.gene69288:intron | 40.0% |
| ! | CATCATGTCTAGGATGGTAT+TGG | - | chr3.2:63388005-63388024 | MS.gene69288:intron | 40.0% |
| ! | CCATTGATTAGTCCTGTAAG+AGG | - | chr3.2:63390185-63390204 | MS.gene69288:CDS | 40.0% |
| ! | CTTTTCGCAAGTCAATTCAG+CGG | - | chr3.2:63388846-63388865 | MS.gene69288:CDS | 40.0% |
| ! | TTGTTGTTGTTGTGGAGGAA+AGG | + | chr3.2:63390221-63390240 | None:intergenic | 40.0% |
| !! | AGACTTTGTTGTTGAACGGT+TGG | + | chr3.2:63389694-63389713 | None:intergenic | 40.0% |
| !! | ATTGTAGCTGCTGATTCAGA+AGG | - | chr3.2:63388815-63388834 | MS.gene69288:CDS | 40.0% |
| !! | CTGAATTGACTTGCGAAAAG+AGG | + | chr3.2:63388846-63388865 | None:intergenic | 40.0% |
| !! | GACTTTGTTGTTGAACGGTT+GGG | + | chr3.2:63389693-63389712 | None:intergenic | 40.0% |
| !! | GGCACAATAGTAGTTCTAGT+CGG | - | chr3.2:63388679-63388698 | MS.gene69288:intron | 40.0% |
| !! | TTTGCATTGGTTCCTACAAC+GGG | - | chr3.2:63390074-63390093 | MS.gene69288:intron | 40.0% |
| AAAAGGGGTTTGCACTGCTT+TGG | - | chr3.2:63387521-63387540 | MS.gene69288:CDS | 45.0% | |
| AACAAAGTCTTCATGGGGGA+TGG | - | chr3.2:63389704-63389723 | MS.gene69288:CDS | 45.0% | |
| ACAATCAAGTAGGCACTCTG+AGG | + | chr3.2:63389568-63389587 | None:intergenic | 45.0% | |
| ACCGACACATACATAGACAC+CGG | + | chr3.2:63387273-63387292 | None:intergenic | 45.0% | |
| AGACTGACACCTATGATCGA+AGG | - | chr3.2:63387135-63387154 | MS.gene69288:CDS | 45.0% | |
| CAAATGGTACTCCTCTTGGT+TGG | - | chr3.2:63386949-63386968 | MS.gene69288:CDS | 45.0% | |
| CAGAATGGAAGAACTTGCCT+CGG | - | chr3.2:63389504-63389523 | MS.gene69288:intron | 45.0% | |
| CAGCAAGATCCAATGCAACA+AGG | - | chr3.2:63389842-63389861 | MS.gene69288:intron | 45.0% | |
| CAGCATTGCTTTGGCTGAAA+TGG | - | chr3.2:63388997-63389016 | MS.gene69288:intron | 45.0% | |
| CCTGAGACAGACACTGAAAA+TGG | + | chr3.2:63390116-63390135 | None:intergenic | 45.0% | |
| CTACTGCATTTGGGCAACTT+TGG | - | chr3.2:63388325-63388344 | MS.gene69288:CDS | 45.0% | |
| CTTGTTGCATTGGATCTTGC+TGG | + | chr3.2:63389844-63389863 | None:intergenic | 45.0% | |
| GAAAACTTAGGCGTGCCAAA+TGG | + | chr3.2:63390155-63390174 | None:intergenic | 45.0% | |
| GAAACCGTATTACCCGTTGT+AGG | + | chr3.2:63390089-63390108 | None:intergenic | 45.0% | |
| GACATGTGGCAATTCAACTG+AGG | - | chr3.2:63390337-63390356 | MS.gene69288:CDS | 45.0% | |
| GATAAATAGCAGCTTCCACG+CGG | + | chr3.2:63389632-63389651 | None:intergenic | 45.0% | |
| GCATGTTATCGAGTTTGCGA+AGG | + | chr3.2:63388628-63388647 | None:intergenic | 45.0% | |
| GGACTAATCAATGGCACAGA+AGG | + | chr3.2:63390179-63390198 | None:intergenic | 45.0% | |
| GGCAATTCAACTGAGGTCAA+TGG | - | chr3.2:63390344-63390363 | MS.gene69288:CDS | 45.0% | |
| GGCATGTGTCTCGATACTAT+TGG | - | chr3.2:63388031-63388050 | MS.gene69288:intron | 45.0% | |
| GGTGAAGATATGTCAGGTTC+AGG | - | chr3.2:63387498-63387517 | MS.gene69288:CDS | 45.0% | |
| GGTTCCTACAACGGGTAATA+CGG | - | chr3.2:63390082-63390101 | MS.gene69288:intron | 45.0% | |
| GTTGTTGAACGGTTGGGATT+AGG | + | chr3.2:63389687-63389706 | None:intergenic | 45.0% | |
| TCCACTAGTATTGTGACACG+TGG | - | chr3.2:63387971-63387990 | MS.gene69288:intron | 45.0% | |
| TCCGGTGTCTATGTATGTGT+CGG | - | chr3.2:63387269-63387288 | MS.gene69288:intron | 45.0% | |
| TGACGTATCAGTGTTGTGTC+CGG | - | chr3.2:63387251-63387270 | MS.gene69288:CDS | 45.0% | |
| TGTGGCAAAGAGAGATGGAA+TGG | - | chr3.2:63388382-63388401 | MS.gene69288:CDS | 45.0% | |
| TTGAAGTGAGACCTTAGGGA+GGG | + | chr3.2:63389047-63389066 | None:intergenic | 45.0% | |
| TTGAGAATAGGCCAACCAAG+AGG | + | chr3.2:63386963-63386982 | None:intergenic | 45.0% | |
| TTGGATCTTGCTGGTATCCA+AGG | + | chr3.2:63389835-63389854 | None:intergenic | 45.0% | |
| ! | ACTCCACACAAAGCACCATT+TGG | - | chr3.2:63390137-63390156 | MS.gene69288:CDS | 45.0% |
| ! | CCATTTTCAGTGTCTGTCTC+AGG | - | chr3.2:63390113-63390132 | MS.gene69288:intron | 45.0% |
| ! | GCACTCTGAGGAGAATTGAT+CGG | + | chr3.2:63389556-63389575 | None:intergenic | 45.0% |
| ! | TTCTGCAGGTAATGACTTGC+AGG | - | chr3.2:63388570-63388589 | MS.gene69288:intron | 45.0% |
| ! | TTTGAAGTGAGACCTTAGGG+AGG | + | chr3.2:63389048-63389067 | None:intergenic | 45.0% |
| !! | AGCTGCTGATTCAGAAGGTT+CGG | - | chr3.2:63388820-63388839 | MS.gene69288:CDS | 45.0% |
| !! | TGTCTAGGATGGTATTGGTG+TGG | - | chr3.2:63388010-63388029 | MS.gene69288:intron | 45.0% |
| !!! | CTCTAGAGTTTTGGAGAGCA+TGG | - | chr3.2:63389983-63390002 | MS.gene69288:intron | 45.0% |
| CCAGACACACCTTCGATCAT+AGG | + | chr3.2:63387147-63387166 | None:intergenic | 50.0% | |
| CTTCTCACTGAGACCTGCTT+CGG | + | chr3.2:63388909-63388928 | None:intergenic | 50.0% | |
| GCCACGTGTCACAATACTAG+TGG | + | chr3.2:63387975-63387994 | None:intergenic | 50.0% | |
| GGCACAGAAGGCGAAAACTT+AGG | + | chr3.2:63390167-63390186 | None:intergenic | 50.0% | |
| GTCTTCATGGGGGATGGTTA+AGG | - | chr3.2:63389710-63389729 | MS.gene69288:CDS | 50.0% | |
| GTGCCAAATGGTGCTTTGTG+TGG | + | chr3.2:63390143-63390162 | None:intergenic | 50.0% | |
| TTATCGAGTTTGCGAAGGGC+TGG | + | chr3.2:63388623-63388642 | None:intergenic | 50.0% | |
| TTCAGCGGCAAGAAGAGAAG+TGG | - | chr3.2:63388861-63388880 | MS.gene69288:CDS | 50.0% | |
| TTCTCACTGAGACCTGCTTC+GGG | + | chr3.2:63388908-63388927 | None:intergenic | 50.0% | |
| ! | CCTATGATCGAAGGTGTGTC+TGG | - | chr3.2:63387144-63387163 | MS.gene69288:CDS | 50.0% |
| !! | TGGGATTAGGCGTTGATCTG+TGG | + | chr3.2:63389674-63389693 | None:intergenic | 50.0% |
| AACGTCAAACCTCAGCGTCG+CGG | - | chr3.2:63390260-63390279 | MS.gene69288:CDS | 55.0% | |
| AGCGGCAAGAAGAGAAGTGG+TGG | - | chr3.2:63388864-63388883 | MS.gene69288:CDS | 55.0% | |
| GGAGTTCTCTCCCCTCTTAC+AGG | + | chr3.2:63390200-63390219 | None:intergenic | 55.0% | |
| TGAGACCTGCTTCGGGAACA+CGG | + | chr3.2:63388901-63388920 | None:intergenic | 55.0% | |
| ! | AGGTAATGACTTGCAGGCCC+AGG | - | chr3.2:63388576-63388595 | MS.gene69288:CDS | 55.0% |
| !! | TCCTTGAAGCATCGGTTCCC+TGG | - | chr3.2:63389795-63389814 | MS.gene69288:intron | 55.0% |
| AAACCTCAGCGTCGCGGCTT+TGG | - | chr3.2:63390266-63390285 | MS.gene69288:CDS | 60.0% | |
| ACTCGAGATTGCGAACCGCG+TGG | - | chr3.2:63389614-63389633 | MS.gene69288:intron | 60.0% | |
| AGACCTGCTTCGGGAACACG+GGG | + | chr3.2:63388899-63388918 | None:intergenic | 60.0% | |
| CGAGTTTGCGAAGGGCTGGA+AGG | + | chr3.2:63388619-63388638 | None:intergenic | 60.0% | |
| GAGACCTGCTTCGGGAACAC+GGG | + | chr3.2:63388900-63388919 | None:intergenic | 60.0% | |
| GCCAGGGAACCGATGCTTCA+AGG | + | chr3.2:63389799-63389818 | None:intergenic | 60.0% | |
| TGCTTCGGGAACACGGGGAA+CGG | + | chr3.2:63388894-63388913 | None:intergenic | 60.0% | |
| ACACCAAAGCCGCGACGCTG+AGG | + | chr3.2:63390272-63390291 | None:intergenic | 65.0% | |
| CTTCGGGAACACGGGGAACG+GGG | + | chr3.2:63388892-63388911 | None:intergenic | 65.0% | |
| GCTTCGGGAACACGGGGAAC+GGG | + | chr3.2:63388893-63388912 | None:intergenic | 65.0% | |
| GTTCCCCGTGTTCCCGAAGC+AGG | - | chr3.2:63388893-63388912 | MS.gene69288:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 63386801 | 63390424 | 63386801 | ID=MS.gene69288 |
| chr3.2 | mRNA | 63386801 | 63390424 | 63386801 | ID=MS.gene69288.t1;Parent=MS.gene69288 |
| chr3.2 | exon | 63390127 | 63390424 | 63390127 | ID=MS.gene69288.t1.exon1;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63390127 | 63390424 | 63390127 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63389652 | 63389768 | 63389652 | ID=MS.gene69288.t1.exon2;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63389652 | 63389768 | 63389652 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63388746 | 63388900 | 63388746 | ID=MS.gene69288.t1.exon3;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63388746 | 63388900 | 63388746 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63388573 | 63388647 | 63388573 | ID=MS.gene69288.t1.exon4;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63388573 | 63388647 | 63388573 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63388171 | 63388461 | 63388171 | ID=MS.gene69288.t1.exon5;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63388171 | 63388461 | 63388171 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63387362 | 63387718 | 63387362 | ID=MS.gene69288.t1.exon6;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63387362 | 63387718 | 63387362 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| chr3.2 | exon | 63386801 | 63387271 | 63386801 | ID=MS.gene69288.t1.exon7;Parent=MS.gene69288.t1 |
| chr3.2 | CDS | 63386801 | 63387271 | 63386801 | ID=cds.MS.gene69288.t1;Parent=MS.gene69288.t1 |
| Gene Sequence |
| Protein sequence |
