Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69431.t1 | XP_003603733.1 | 97.2 | 388 | 9 | 1 | 1 | 388 | 1 | 386 | 2.40E-224 | 787.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69431.t1 | Q0J0A4 | 82.5 | 366 | 63 | 1 | 24 | 388 | 49 | 414 | 4.1e-188 | 658.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69431.t1 | G7J4P3 | 97.2 | 388 | 9 | 1 | 1 | 388 | 1 | 386 | 1.7e-224 | 787.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69431 | MS.gene51627 | PPI |
| MS.gene69431 | MS.gene56256 | PPI |
| MS.gene69431 | MS.gene009458 | PPI |
| MS.gene69431 | MS.gene63514 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69431.t1 | MTR_3g113160 | 97.165 | 388 | 9 | 1 | 1 | 388 | 1 | 386 | 0.0 | 782 |
| MS.gene69431.t1 | MTR_1g023340 | 83.149 | 362 | 57 | 1 | 27 | 388 | 22 | 379 | 0.0 | 645 |
| MS.gene69431.t1 | MTR_1g023340 | 82.263 | 327 | 54 | 1 | 27 | 353 | 35 | 357 | 0.0 | 576 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69431.t1 | AT4G24160 | 81.250 | 368 | 67 | 2 | 20 | 385 | 48 | 415 | 0.0 | 638 |
| MS.gene69431.t1 | AT4G24160 | 83.624 | 287 | 46 | 1 | 20 | 305 | 48 | 334 | 0.0 | 511 |
Find 102 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCATGTACAACACTTAATTT+TGG | 0.224490 | 3.3:-92958441 | MS.gene69431:CDS |
| ACTGACCTTGAGCGCGTATT+TGG | 0.229778 | 3.3:+92958570 | None:intergenic |
| CCTACGCTTGTTATGGTTCA+TGG | 0.238094 | 3.3:-92959007 | MS.gene69431:CDS |
| TAGTACTACTTACTTGATAA+TGG | 0.269614 | 3.3:+92959254 | None:intergenic |
| AGGTTCCATGTGAAATTATC+AGG | 0.270422 | 3.3:-92955753 | MS.gene69431:CDS |
| TTAGTAACAAACTCAGTCTT+TGG | 0.271154 | 3.3:+92958386 | None:intergenic |
| ATACTGCTTGGACATTCTTT+TGG | 0.272412 | 3.3:-92958607 | MS.gene69431:CDS |
| GTGGCAGAGGTTTAGGTCCT+TGG | 0.277706 | 3.3:-92957125 | MS.gene69431:intron |
| GAGCCGTTCTGAACCATCTA+TGG | 0.283949 | 3.3:-92958343 | MS.gene69431:CDS |
| GAGAAAACGCGGCTCGTTAC+TGG | 0.289319 | 3.3:+92959063 | None:intergenic |
| TGCATTTGTGGCAGAGGTTT+AGG | 0.300561 | 3.3:-92957132 | MS.gene69431:intron |
| TGGCAGAGGTTTAGGTCCTT+GGG | 0.303425 | 3.3:-92957124 | MS.gene69431:intron |
| TCATATGCTTGCGAGCTTCT+TGG | 0.307279 | 3.3:+92955776 | None:intergenic |
| TCATGGATACGCTGCTTCTC+AGG | 0.312153 | 3.3:-92958990 | MS.gene69431:CDS |
| CATCGAAATCTAAAAGCTTC+TGG | 0.316718 | 3.3:-92959341 | MS.gene69431:CDS |
| TCATATATGGTTACGAAGAT+TGG | 0.317405 | 3.3:-92955816 | MS.gene69431:CDS |
| CATATGCTTGCGAGCTTCTT+GGG | 0.332927 | 3.3:+92955777 | None:intergenic |
| GTATATTTGCGGACCATGTT+AGG | 0.357715 | 3.3:+92957099 | None:intergenic |
| TAAAATTAGATTCCCATAGA+TGG | 0.360134 | 3.3:+92958330 | None:intergenic |
| AAGGTTTCTTACCCCAAATT+CGG | 0.374235 | 3.3:-92955573 | MS.gene69431:CDS |
| TGATTCTCCTACGCTTGTTA+TGG | 0.377711 | 3.3:-92959014 | MS.gene69431:CDS |
| GTGCCCACCACATTCATATA+TGG | 0.386094 | 3.3:-92955829 | MS.gene69431:CDS |
| ATAACAAGCGTAGGAGAATC+AGG | 0.396588 | 3.3:+92959016 | None:intergenic |
| TAAGCAGACGATAGCCCTTC+GGG | 0.404316 | 3.3:+92955536 | None:intergenic |
| ATTAAGTGTTGTACATGCTC+AGG | 0.405149 | 3.3:+92958446 | None:intergenic |
| ACACAGCTCCCCACTAGCTT+TGG | 0.405889 | 3.3:+92956899 | None:intergenic |
| ATGTCCAAGCAGTATGAAAT+TGG | 0.409418 | 3.3:+92958615 | None:intergenic |
| AGGTTTGGTACACATTCAAC+CGG | 0.416717 | 3.3:-92957069 | MS.gene69431:CDS |
| ACCTAGCACTTGTATATTTG+CGG | 0.422424 | 3.3:+92957088 | None:intergenic |
| CTAGGATGCCCCTTCTTCAA+AGG | 0.443647 | 3.3:-92956845 | MS.gene69431:intron |
| GAGGAATCAAGTCTGCTAAC+TGG | 0.445927 | 3.3:-92957030 | MS.gene69431:intron |
| GAGCGTGTTAACATAGGTTC+TGG | 0.447895 | 3.3:-92959121 | MS.gene69431:CDS |
| GCTTCTGGTCTTCACTCCGT+TGG | 0.462666 | 3.3:-92959326 | MS.gene69431:CDS |
| CTCCCGGCTCTAAAGTTAGA+TGG | 0.468219 | 3.3:-92959096 | MS.gene69431:CDS |
| CTGACCAATTTCATACTGCT+TGG | 0.468352 | 3.3:-92958619 | MS.gene69431:CDS |
| CTAAGCAGACGATAGCCCTT+CGG | 0.468701 | 3.3:+92955535 | None:intergenic |
| GTCAATGAACACAAAATGTC+CGG | 0.479554 | 3.3:+92955637 | None:intergenic |
| GATTGCCAAACCTTTGAAGA+AGG | 0.482203 | 3.3:+92956835 | None:intergenic |
| TGAAATTATCAGGGTCCCTC+GGG | 0.484649 | 3.3:-92955743 | MS.gene69431:intron |
| AGGTCCTTGGGGTCCTAACA+TGG | 0.493507 | 3.3:-92957112 | MS.gene69431:CDS |
| CGAAGGGCTATCGTCTGCTT+AGG | 0.496103 | 3.3:-92955534 | None:intergenic |
| CAACCCAAGTGGCTTCCATT+CGG | 0.497965 | 3.3:-92955615 | MS.gene69431:CDS |
| CTTACTTGATAATGGAAAGA+AGG | 0.504243 | 3.3:+92959262 | None:intergenic |
| AACATAGGTTCTGGTCCTCC+CGG | 0.504382 | 3.3:-92959112 | MS.gene69431:CDS |
| TTGCATTTGGAGCATTTGCT+AGG | 0.504415 | 3.3:-92956863 | MS.gene69431:CDS |
| ATCATTGCTGTTGATCAACT+TGG | 0.506443 | 3.3:-92958923 | MS.gene69431:CDS |
| GTGAAATTATCAGGGTCCCT+CGG | 0.506774 | 3.3:-92955744 | MS.gene69431:CDS |
| AAATATACAAGTGCTAGGTT+TGG | 0.514674 | 3.3:-92957084 | MS.gene69431:CDS |
| GTTTCTTCTGTAAACCCGGC+AGG | 0.515353 | 3.3:+92958413 | None:intergenic |
| CATGGATACGCTGCTTCTCA+GGG | 0.521168 | 3.3:-92958989 | MS.gene69431:CDS |
| GTTCAAGAGCGTGTTAACAT+AGG | 0.522283 | 3.3:-92959127 | MS.gene69431:CDS |
| GTGGTGGGCACTTTCCACTC+TGG | 0.523249 | 3.3:+92955841 | None:intergenic |
| GAACCATCTAACTTTAGAGC+CGG | 0.525661 | 3.3:+92959093 | None:intergenic |
| AGATTATGTTTATCATACAT+TGG | 0.527652 | 3.3:-92956925 | MS.gene69431:CDS |
| ATCTGTTTCTTCTGTAAACC+CGG | 0.536750 | 3.3:+92958409 | None:intergenic |
| CAGCCGAATGGAAGCCACTT+GGG | 0.541287 | 3.3:+92955612 | None:intergenic |
| TTCACATGTAAAAGTACTGA+AGG | 0.544682 | 3.3:-92958783 | MS.gene69431:intron |
| ATTGCCAAACCTTTGAAGAA+GGG | 0.549575 | 3.3:+92956836 | None:intergenic |
| CATTGGCGGCCAAAGCTAGT+GGG | 0.553970 | 3.3:-92956908 | MS.gene69431:CDS |
| AGAAGCTCGCAAGCATATGA+AGG | 0.558147 | 3.3:-92955773 | MS.gene69431:CDS |
| AACCATCTAACTTTAGAGCC+GGG | 0.560688 | 3.3:+92959094 | None:intergenic |
| GGCAGAGGTTTAGGTCCTTG+GGG | 0.564857 | 3.3:-92957123 | MS.gene69431:intron |
| ACATTGGCGGCCAAAGCTAG+TGG | 0.568091 | 3.3:-92956909 | MS.gene69431:CDS |
| ATGATATGATCGGTTGAAGT+GGG | 0.570401 | 3.3:+92959300 | None:intergenic |
| ACAGCCGAATGGAAGCCACT+TGG | 0.576660 | 3.3:+92955611 | None:intergenic |
| TTGCCAAACCTTTGAAGAAG+GGG | 0.577063 | 3.3:+92956837 | None:intergenic |
| GAAAATGAATCTCTTCCCGA+AGG | 0.579910 | 3.3:-92955551 | MS.gene69431:CDS |
| AAGTTTCGAGCAACATGGAA+GGG | 0.587783 | 3.3:-92958365 | MS.gene69431:CDS |
| GCGGCTCGTTACTGGTTGAA+CGG | 0.595132 | 3.3:+92959071 | None:intergenic |
| AGCCGTTCTGAACCATCTAT+GGG | 0.595543 | 3.3:-92958342 | MS.gene69431:CDS |
| TAAGTTTCGAGCAACATGGA+AGG | 0.597296 | 3.3:-92958366 | MS.gene69431:CDS |
| TGCTTCCAAATACGCGCTCA+AGG | 0.600744 | 3.3:-92958575 | MS.gene69431:intron |
| TTATGTTTATCATACATTGG+CGG | 0.606664 | 3.3:-92956922 | MS.gene69431:CDS |
| TTAAGTGTTGTACATGCTCA+GGG | 0.606900 | 3.3:+92958447 | None:intergenic |
| GATGATATGATCGGTTGAAG+TGG | 0.613666 | 3.3:+92959299 | None:intergenic |
| ATCTTGCAGAAACTGAGGCA+TGG | 0.614755 | 3.3:-92958681 | MS.gene69431:intron |
| TTCGTAACCATATATGAATG+TGG | 0.615369 | 3.3:+92955822 | None:intergenic |
| AAGCATAAAACACAGCCGAA+TGG | 0.619078 | 3.3:+92955600 | None:intergenic |
| CTCAGCGGCGATGATATGAT+CGG | 0.621828 | 3.3:+92959290 | None:intergenic |
| CCATGAACCATAACAAGCGT+AGG | 0.627502 | 3.3:+92959007 | None:intergenic |
| TAACCATATATGAATGTGGT+GGG | 0.627519 | 3.3:+92955826 | None:intergenic |
| TCATTGCTGTTGATCAACTT+GGG | 0.634448 | 3.3:-92958922 | MS.gene69431:intron |
| GTGTTCATTGACAACCCAAG+TGG | 0.634463 | 3.3:-92955626 | MS.gene69431:CDS |
| TTTCTTGCAGTGCTCCAGAG+TGG | 0.634871 | 3.3:-92955855 | MS.gene69431:intron |
| ATTGGCGGCCAAAGCTAGTG+GGG | 0.638338 | 3.3:-92956907 | MS.gene69431:CDS |
| GGTTCCATGTGAAATTATCA+GGG | 0.643857 | 3.3:-92955752 | MS.gene69431:CDS |
| TCCGCAAATATACAAGTGCT+AGG | 0.645840 | 3.3:-92957089 | MS.gene69431:CDS |
| CGGACCATGTTAGGACCCCA+AGG | 0.646328 | 3.3:+92957108 | None:intergenic |
| AAAATGAATCTCTTCCCGAA+GGG | 0.646555 | 3.3:-92955550 | MS.gene69431:CDS |
| AGCAATGATTCTGAAACGAG+AGG | 0.649538 | 3.3:+92958937 | None:intergenic |
| TTACTAAGTTTCGAGCAACA+TGG | 0.649865 | 3.3:-92958370 | MS.gene69431:CDS |
| GGAAAGAAGGCGTTTCTCAG+CGG | 0.650667 | 3.3:+92959275 | None:intergenic |
| GTAACCATATATGAATGTGG+TGG | 0.658814 | 3.3:+92955825 | None:intergenic |
| TGTTGATCTTGCAGAAACTG+AGG | 0.661163 | 3.3:-92958686 | MS.gene69431:intron |
| ATTAGACAAAACGACGACGT+CGG | 0.664772 | 3.3:-92959375 | MS.gene69431:CDS |
| TTCCCATAGATGGTTCAGAA+CGG | 0.677131 | 3.3:+92958340 | None:intergenic |
| CGGTTGAAGTGGGAATCCAA+CGG | 0.678476 | 3.3:+92959310 | None:intergenic |
| GAAGATTGGATGAATTACGA+AGG | 0.684343 | 3.3:-92955802 | MS.gene69431:CDS |
| GGGACCCTGATAATTTCACA+TGG | 0.689998 | 3.3:+92955748 | None:intergenic |
| GGTTTGGTACACATTCAACC+GGG | 0.692249 | 3.3:-92957068 | MS.gene69431:CDS |
| GTAACAGTGTTGAGAAAACG+CGG | 0.698377 | 3.3:+92959052 | None:intergenic |
| CATCTAACTTTAGAGCCGGG+AGG | 0.755218 | 3.3:+92959097 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTACAAATACATATTAA+AGG | + | chr3.3:92957029-92957048 | None:intergenic | 10.0% |
| !! | AATTTAAATAAATAGGTAAA+CGG | + | chr3.3:92956212-92956231 | None:intergenic | 10.0% |
| !!! | TTAAAATATATTTTTGCATT+TGG | - | chr3.3:92958046-92958065 | MS.gene69431:intron | 10.0% |
| !!! | TTTTTGATGATAAAAATATA+GGG | + | chr3.3:92958766-92958785 | None:intergenic | 10.0% |
| !!! | TTTTTTGATGATAAAAATAT+AGG | + | chr3.3:92958767-92958786 | None:intergenic | 10.0% |
| !! | AAAATTAAAACATGAACTTA+AGG | - | chr3.3:92958902-92958921 | MS.gene69431:intron | 15.0% |
| !! | AAATTAAAACATGAACTTAA+GGG | - | chr3.3:92958903-92958922 | MS.gene69431:intron | 15.0% |
| !! | ACAAAATAATATAACAATGT+TGG | + | chr3.3:92957746-92957765 | None:intergenic | 15.0% |
| !! | ACAACGAAATTTAAATAAAT+AGG | + | chr3.3:92956219-92956238 | None:intergenic | 15.0% |
| !! | AGATAAATTTCTTGATTATT+AGG | - | chr3.3:92958986-92959005 | MS.gene69431:CDS | 15.0% |
| !! | CAAGATATTAAATTGATATA+TGG | - | chr3.3:92957920-92957939 | MS.gene69431:intron | 15.0% |
| !! | TAATAACAATAAAAAGTGAT+TGG | + | chr3.3:92957416-92957435 | None:intergenic | 15.0% |
| !! | TTATTACTCAAATCAAATAT+GGG | - | chr3.3:92957430-92957449 | MS.gene69431:intron | 15.0% |
| !!! | AAAAAATGTTTCATTGTTTT+AGG | + | chr3.3:92959224-92959243 | None:intergenic | 15.0% |
| !!! | ACAATTTTCTGTTATTATAT+TGG | - | chr3.3:92956764-92956783 | MS.gene69431:intron | 15.0% |
| !!! | TCTTTTTTGTTTTCATTTTT+GGG | - | chr3.3:92958272-92958291 | MS.gene69431:intron | 15.0% |
| !!! | TTCTTTTTTGTTTTCATTTT+TGG | - | chr3.3:92958271-92958290 | MS.gene69431:intron | 15.0% |
| !! | AAATGAATAAAATATGCATG+AGG | + | chr3.3:92956445-92956464 | None:intergenic | 20.0% |
| !! | ACAAATACATATTAAAGGAA+GGG | + | chr3.3:92957024-92957043 | None:intergenic | 20.0% |
| !! | AGATTATGTTTATCATACAT+TGG | - | chr3.3:92957997-92958016 | MS.gene69431:intron | 20.0% |
| !! | CCATAGAATAAAGTATAAAA+TGG | - | chr3.3:92957703-92957722 | MS.gene69431:intron | 20.0% |
| !! | GTGAAAATATATAGAAATGA+AGG | + | chr3.3:92956092-92956111 | None:intergenic | 20.0% |
| !! | GTTATTACTCAAATCAAATA+TGG | - | chr3.3:92957429-92957448 | MS.gene69431:intron | 20.0% |
| !! | TACAAATACATATTAAAGGA+AGG | + | chr3.3:92957025-92957044 | None:intergenic | 20.0% |
| !! | TATCAAAGGATGATAAAAAT+GGG | + | chr3.3:92956660-92956679 | None:intergenic | 20.0% |
| !! | TTATCAAAGGATGATAAAAA+TGG | + | chr3.3:92956661-92956680 | None:intergenic | 20.0% |
| !!! | CCATTTTATACTTTATTCTA+TGG | + | chr3.3:92957706-92957725 | None:intergenic | 20.0% |
| !!! | GTATACTTTTATTTATGAAG+AGG | - | chr3.3:92956732-92956751 | MS.gene69431:intron | 20.0% |
| !!! | TCATAAATAAAAGTATACAC+AGG | + | chr3.3:92956730-92956749 | None:intergenic | 20.0% |
| !!! | TGTCTTTTTTTCTCTTATTA+TGG | - | chr3.3:92957359-92957378 | MS.gene69431:intron | 20.0% |
| !!! | TTCTATATATTTTCACAGTT+GGG | - | chr3.3:92956096-92956115 | MS.gene69431:intron | 20.0% |
| !!! | TTTCTATATATTTTCACAGT+TGG | - | chr3.3:92956095-92956114 | MS.gene69431:intron | 20.0% |
| ! | AAATCAAATATGGGATTAGA+GGG | - | chr3.3:92957439-92957458 | MS.gene69431:intron | 25.0% |
| ! | ACAAGAACAATTAAGTCAAT+AGG | + | chr3.3:92958362-92958381 | None:intergenic | 25.0% |
| ! | ACTTAAGGGAAAAAAAATTC+AGG | - | chr3.3:92958917-92958936 | MS.gene69431:intron | 25.0% |
| ! | AGTTCTACTTAATAACTATC+TGG | - | chr3.3:92957095-92957114 | MS.gene69431:CDS | 25.0% |
| ! | ATGTTTGGGAAAAATAGAAT+AGG | - | chr3.3:92958462-92958481 | MS.gene69431:intron | 25.0% |
| ! | CAAAAAATTGTCAGGTAAAA+AGG | - | chr3.3:92956620-92956639 | MS.gene69431:intron | 25.0% |
| ! | CATCAAAAAAGAAAAAAGCT+TGG | - | chr3.3:92958777-92958796 | MS.gene69431:intron | 25.0% |
| ! | GATTAAAAAATTATACCCGA+GGG | + | chr3.3:92959197-92959216 | None:intergenic | 25.0% |
| ! | GTAAAAGAAAGTTAAGAAGT+CGG | + | chr3.3:92956415-92956434 | None:intergenic | 25.0% |
| ! | TAAAATTAGATTCCCATAGA+TGG | + | chr3.3:92956595-92956614 | None:intergenic | 25.0% |
| ! | TAGTACTACTTACTTGATAA+TGG | + | chr3.3:92955671-92955690 | None:intergenic | 25.0% |
| ! | TATCAGGTTTCAATAAATGA+GGG | - | chr3.3:92957522-92957541 | MS.gene69431:intron | 25.0% |
| ! | TATTACTAACTCTTAAGTCA+TGG | - | chr3.3:92957184-92957203 | MS.gene69431:intron | 25.0% |
| ! | TGATAAAAATATAGGGTGAA+AGG | + | chr3.3:92958759-92958778 | None:intergenic | 25.0% |
| ! | TGATTAAAAAATTATACCCG+AGG | + | chr3.3:92959198-92959217 | None:intergenic | 25.0% |
| ! | TGTTTGTTTGTTTGTTTGTT+AGG | - | chr3.3:92955759-92955778 | MS.gene69431:CDS | 25.0% |
| ! | TTATGTTTATCATACATTGG+CGG | - | chr3.3:92958000-92958019 | MS.gene69431:intron | 25.0% |
| ! | TTATTAGGATTAATATCCCA+TGG | - | chr3.3:92959001-92959020 | MS.gene69431:CDS | 25.0% |
| !! | TATGAAATTGGTCAGATTTT+TGG | + | chr3.3:92956298-92956317 | None:intergenic | 25.0% |
| !! | TCTATATATTTTCACAGTTG+GGG | - | chr3.3:92956097-92956116 | MS.gene69431:intron | 25.0% |
| !! | TGATTGTGTTGGTAAAAAAT+TGG | + | chr3.3:92958657-92958676 | None:intergenic | 25.0% |
| !! | TTTTACCTGACAATTTTTTG+AGG | + | chr3.3:92956620-92956639 | None:intergenic | 25.0% |
| !!! | AATTTTCATTTCTGTTTCTG+TGG | - | chr3.3:92957616-92957635 | MS.gene69431:intron | 25.0% |
| !!! | ATTTTAATACAATGCAGCAA+TGG | + | chr3.3:92956381-92956400 | None:intergenic | 25.0% |
| !!! | TGACTTAATTGTTCTTGTTT+TGG | - | chr3.3:92958364-92958383 | MS.gene69431:CDS | 25.0% |
| !!! | TTCTGTTATTATATTGGTTC+TGG | - | chr3.3:92956770-92956789 | MS.gene69431:intron | 25.0% |
| AAATATACAAGTGCTAGGTT+TGG | - | chr3.3:92957838-92957857 | MS.gene69431:intron | 30.0% | |
| AAATTAATCACTTCTATCGC+AGG | - | chr3.3:92959262-92959281 | MS.gene69431:intron | 30.0% | |
| AACAATTAAGTCAATAGGAG+TGG | + | chr3.3:92958357-92958376 | None:intergenic | 30.0% | |
| AACAGTTATCTTGATTGTGT+TGG | + | chr3.3:92958668-92958687 | None:intergenic | 30.0% | |
| AATCAAATATGGGATTAGAG+GGG | - | chr3.3:92957440-92957459 | MS.gene69431:intron | 30.0% | |
| AATGTGTGGTAACTTATCAA+AGG | + | chr3.3:92956674-92956693 | None:intergenic | 30.0% | |
| ACAATTAAGTCAATAGGAGT+GGG | + | chr3.3:92958356-92958375 | None:intergenic | 30.0% | |
| ACTTAAAACAGCTAATCAGA+TGG | + | chr3.3:92958122-92958141 | None:intergenic | 30.0% | |
| AGAGTCTTCTACTATATATC+AGG | - | chr3.3:92956827-92956846 | MS.gene69431:intron | 30.0% | |
| ATCTCTATGTATGACATGAT+TGG | + | chr3.3:92958194-92958213 | None:intergenic | 30.0% | |
| CAAATCAAATATGGGATTAG+AGG | - | chr3.3:92957438-92957457 | MS.gene69431:intron | 30.0% | |
| CTGTCTGATTAAAAAATGTG+TGG | + | chr3.3:92956688-92956707 | None:intergenic | 30.0% | |
| CTTAAAACAGCTAATCAGAT+GGG | + | chr3.3:92958121-92958140 | None:intergenic | 30.0% | |
| GAGTCTTCTACTATATATCA+GGG | - | chr3.3:92956828-92956847 | MS.gene69431:intron | 30.0% | |
| GTAATCTTAAGTCAATATGC+CGG | + | chr3.3:92957070-92957089 | None:intergenic | 30.0% | |
| GTATCAGGTTTCAATAAATG+AGG | - | chr3.3:92957521-92957540 | MS.gene69431:intron | 30.0% | |
| TAACCATATATGAATGTGGT+GGG | + | chr3.3:92959099-92959118 | None:intergenic | 30.0% | |
| TCAACCATTAATTAAGCCAA+GGG | + | chr3.3:92957239-92957258 | None:intergenic | 30.0% | |
| TCATATATGGTTACGAAGAT+TGG | - | chr3.3:92959106-92959125 | MS.gene69431:CDS | 30.0% | |
| TTAATTAATGGTTGAGGACT+TGG | - | chr3.3:92957244-92957263 | MS.gene69431:intron | 30.0% | |
| TTACACCTCAAAAAATTGTC+AGG | - | chr3.3:92956612-92956631 | MS.gene69431:intron | 30.0% | |
| TTAGTAACAAACTCAGTCTT+TGG | + | chr3.3:92956539-92956558 | None:intergenic | 30.0% | |
| TTATTATGGTTACAAGCAGA+AGG | - | chr3.3:92957373-92957392 | MS.gene69431:intron | 30.0% | |
| TTCGTAACCATATATGAATG+TGG | + | chr3.3:92959103-92959122 | None:intergenic | 30.0% | |
| TTGTTATAACTGAAGTTGAC+CGG | - | chr3.3:92957048-92957067 | MS.gene69431:CDS | 30.0% | |
| ! | AGAGATTCATTTTCCGAATT+TGG | + | chr3.3:92959365-92959384 | None:intergenic | 30.0% |
| ! | AGATTCATTTTCCGAATTTG+GGG | + | chr3.3:92959363-92959382 | None:intergenic | 30.0% |
| ! | AGTCATGGATGTAATCATTT+TGG | - | chr3.3:92957199-92957218 | MS.gene69431:intron | 30.0% |
| ! | GAGATTCATTTTCCGAATTT+GGG | + | chr3.3:92959364-92959383 | None:intergenic | 30.0% |
| ! | GCATGTACAACACTTAATTT+TGG | - | chr3.3:92956481-92956500 | MS.gene69431:intron | 30.0% |
| ! | GTACTTTTACATGTGAAATC+AGG | + | chr3.3:92956136-92956155 | None:intergenic | 30.0% |
| ! | TAATTTTCTTCCTGAATGCT+TGG | + | chr3.3:92958889-92958908 | None:intergenic | 30.0% |
| ! | TGTACAACACTTAATTTTGG+TGG | - | chr3.3:92956484-92956503 | MS.gene69431:intron | 30.0% |
| ! | TTATGCTACTTCTAAGTATC+AGG | - | chr3.3:92957506-92957525 | MS.gene69431:intron | 30.0% |
| ! | TTTGTTTGTTTGTTAGGACT+GGG | - | chr3.3:92955769-92955788 | MS.gene69431:CDS | 30.0% |
| !! | AGCTTTATTGTATATGAGCA+CGG | - | chr3.3:92957336-92957355 | MS.gene69431:intron | 30.0% |
| !! | CTTACTTGATAATGGAAAGA+AGG | + | chr3.3:92955663-92955682 | None:intergenic | 30.0% |
| !! | GTACAACACTTAATTTTGGT+GGG | - | chr3.3:92956485-92956504 | MS.gene69431:intron | 30.0% |
| !! | TTCACATGTAAAAGTACTGA+AGG | - | chr3.3:92956139-92956158 | MS.gene69431:intron | 30.0% |
| !! | TTTTAGCCAATGTCTTGTTA+AGG | - | chr3.3:92959025-92959044 | MS.gene69431:CDS | 30.0% |
| !!! | AATCACCCTTACATGTTTTT+TGG | - | chr3.3:92957656-92957675 | MS.gene69431:intron | 30.0% |
| !!! | ATGGTTCATTGATTCTTTTG+AGG | - | chr3.3:92956260-92956279 | MS.gene69431:intron | 30.0% |
| !!! | GTGGTGCTACAATTTTTATA+AGG | + | chr3.3:92958330-92958349 | None:intergenic | 30.0% |
| !!! | TCATTGATTCTTTTGAGGAA+TGG | - | chr3.3:92956265-92956284 | MS.gene69431:intron | 30.0% |
| AAAAAGAAAAAAGCTTGGCC+AGG | - | chr3.3:92958782-92958801 | MS.gene69431:intron | 35.0% | |
| AAAAGAAAAAAGCTTGGCCA+GGG | - | chr3.3:92958783-92958802 | MS.gene69431:intron | 35.0% | |
| AAAATATGCATGAGGTCGTT+TGG | + | chr3.3:92956437-92956456 | None:intergenic | 35.0% | |
| AAAATGAATCTCTTCCCGAA+GGG | - | chr3.3:92959372-92959391 | MS.gene69431:CDS | 35.0% | |
| AAATATCATTCCACGAAGCA+TGG | - | chr3.3:92957566-92957585 | MS.gene69431:intron | 35.0% | |
| AAATGTCTAACCAAGCATTC+AGG | - | chr3.3:92958876-92958895 | MS.gene69431:intron | 35.0% | |
| AAGGTTTCTTACCCCAAATT+CGG | - | chr3.3:92959349-92959368 | MS.gene69431:CDS | 35.0% | |
| ACCTAGCACTTGTATATTTG+CGG | + | chr3.3:92957837-92957856 | None:intergenic | 35.0% | |
| AGAGTCATTCTTCTACTTGT+AGG | - | chr3.3:92957465-92957484 | MS.gene69431:intron | 35.0% | |
| AGGTTCCATGTGAAATTATC+AGG | - | chr3.3:92959169-92959188 | MS.gene69431:intron | 35.0% | |
| ATACAATAAAGCTCTTGCCA+CGG | + | chr3.3:92957329-92957348 | None:intergenic | 35.0% | |
| ATGACCCTTGGCTTAATTAA+TGG | - | chr3.3:92957232-92957251 | MS.gene69431:intron | 35.0% | |
| ATGATATGATCGGTTGAAGT+GGG | + | chr3.3:92955625-92955644 | None:intergenic | 35.0% | |
| ATGTCCAAGCAGTATGAAAT+TGG | + | chr3.3:92956310-92956329 | None:intergenic | 35.0% | |
| CATCGAAATCTAAAAGCTTC+TGG | - | chr3.3:92955581-92955600 | MS.gene69431:CDS | 35.0% | |
| CTCAACCATTAATTAAGCCA+AGG | + | chr3.3:92957240-92957259 | None:intergenic | 35.0% | |
| CTTGGCTTAATTAATGGTTG+AGG | - | chr3.3:92957238-92957257 | MS.gene69431:intron | 35.0% | |
| GAAGATTGGATGAATTACGA+AGG | - | chr3.3:92959120-92959139 | MS.gene69431:CDS | 35.0% | |
| GAGAACCTAAGTCAATATGT+CGG | + | chr3.3:92957145-92957164 | None:intergenic | 35.0% | |
| GGTTCCATGTGAAATTATCA+GGG | - | chr3.3:92959170-92959189 | MS.gene69431:intron | 35.0% | |
| GTAACCATATATGAATGTGG+TGG | + | chr3.3:92959100-92959119 | None:intergenic | 35.0% | |
| GTCAATGAACACAAAATGTC+CGG | + | chr3.3:92959288-92959307 | None:intergenic | 35.0% | |
| GTGACAATTCTCATGTTTGT+TGG | + | chr3.3:92957682-92957701 | None:intergenic | 35.0% | |
| GTTGGCCAAAAAACATGTAA+GGG | + | chr3.3:92957664-92957683 | None:intergenic | 35.0% | |
| TACTTTGTTGCTCGACTTTA+AGG | - | chr3.3:92956183-92956202 | MS.gene69431:intron | 35.0% | |
| TCTACAGTATCAACAAACTG+AGG | + | chr3.3:92956810-92956829 | None:intergenic | 35.0% | |
| TGAGGGAAAGCTAGAAAAAA+TGG | - | chr3.3:92957539-92957558 | MS.gene69431:intron | 35.0% | |
| TGTTGGCCAAAAAACATGTA+AGG | + | chr3.3:92957665-92957684 | None:intergenic | 35.0% | |
| TTACTAAGTTTCGAGCAACA+TGG | - | chr3.3:92956552-92956571 | MS.gene69431:intron | 35.0% | |
| ! | AAGAACAACATATACCGACT+AGG | - | chr3.3:92958432-92958451 | MS.gene69431:CDS | 35.0% |
| ! | AAGACATTGGCTAAAAACCA+TGG | + | chr3.3:92959021-92959040 | None:intergenic | 35.0% |
| ! | AGACATTGGCTAAAAACCAT+GGG | + | chr3.3:92959020-92959039 | None:intergenic | 35.0% |
| ! | ATACTGCTTGGACATTCTTT+TGG | - | chr3.3:92956315-92956334 | MS.gene69431:intron | 35.0% |
| ! | ATATATTTTCACAGTTGGGG+CGG | - | chr3.3:92956100-92956119 | MS.gene69431:intron | 35.0% |
| ! | ATCATTGCTGTTGATCAACT+TGG | - | chr3.3:92955999-92956018 | MS.gene69431:intron | 35.0% |
| ! | ATCTGTTTCTTCTGTAAACC+CGG | + | chr3.3:92956516-92956535 | None:intergenic | 35.0% |
| ! | ATTAAGTGTTGTACATGCTC+AGG | + | chr3.3:92956479-92956498 | None:intergenic | 35.0% |
| ! | ATTGCCAAACCTTTGAAGAA+GGG | + | chr3.3:92958089-92958108 | None:intergenic | 35.0% |
| ! | CAGTTTTTCTGATGCATTTG+TGG | - | chr3.3:92957778-92957797 | MS.gene69431:intron | 35.0% |
| ! | GGATGAATTTTTATGACCCT+TGG | - | chr3.3:92957220-92957239 | MS.gene69431:intron | 35.0% |
| ! | GTTTGTTTGTTTGTTAGGAC+TGG | - | chr3.3:92955768-92955787 | MS.gene69431:CDS | 35.0% |
| ! | TCATTGCTGTTGATCAACTT+GGG | - | chr3.3:92956000-92956019 | MS.gene69431:intron | 35.0% |
| ! | TTAAGTGTTGTACATGCTCA+GGG | + | chr3.3:92956478-92956497 | None:intergenic | 35.0% |
| !! | TTGTCTTTGAAACGAAGTGT+TGG | - | chr3.3:92956944-92956963 | MS.gene69431:intron | 35.0% |
| AAAATTCCTTCCCGATACCA+GGG | + | chr3.3:92957602-92957621 | None:intergenic | 40.0% | |
| AAGCATAAAACACAGCCGAA+TGG | + | chr3.3:92959325-92959344 | None:intergenic | 40.0% | |
| AAGTTTCGAGCAACATGGAA+GGG | - | chr3.3:92956557-92956576 | MS.gene69431:intron | 40.0% | |
| AATAGGTTAGTAGCTGCTGA+TGG | - | chr3.3:92958479-92958498 | MS.gene69431:intron | 40.0% | |
| AGGTTCTCTTTGTCACTGTT+GGG | - | chr3.3:92957157-92957176 | MS.gene69431:intron | 40.0% | |
| AGTATCAACAAACTGAGGTG+AGG | + | chr3.3:92956805-92956824 | None:intergenic | 40.0% | |
| ATAACAAGCGTAGGAGAATC+AGG | + | chr3.3:92955909-92955928 | None:intergenic | 40.0% | |
| ATAATGCTCCACTGCAATGT+AGG | + | chr3.3:92958736-92958755 | None:intergenic | 40.0% | |
| ATCAAGTCTGCTAACTGGTA+TGG | - | chr3.3:92957897-92957916 | MS.gene69431:intron | 40.0% | |
| ATTAGACAAAACGACGACGT+CGG | - | chr3.3:92955547-92955566 | MS.gene69431:CDS | 40.0% | |
| CAAACATGTAGTTGCCTAGT+CGG | + | chr3.3:92958449-92958468 | None:intergenic | 40.0% | |
| CATATCTATCCTGTATCACC+AGG | - | chr3.3:92958533-92958552 | MS.gene69431:intron | 40.0% | |
| CATTTCCATTCTTACCCAAG+AGG | + | chr3.3:92958861-92958880 | None:intergenic | 40.0% | |
| CTGACCAATTTCATACTGCT+TGG | - | chr3.3:92956303-92956322 | MS.gene69431:intron | 40.0% | |
| GAAAATGAATCTCTTCCCGA+AGG | - | chr3.3:92959371-92959390 | MS.gene69431:CDS | 40.0% | |
| GAATCGCATCTCAAAAAAGC+AGG | + | chr3.3:92958254-92958273 | None:intergenic | 40.0% | |
| GACTAGGCAACTACATGTTT+GGG | - | chr3.3:92958448-92958467 | MS.gene69431:CDS | 40.0% | |
| GAGCCCTTACAAATGATACA+AGG | + | chr3.3:92958694-92958713 | None:intergenic | 40.0% | |
| GAGTAAAGGGAGCAGTAAAT+AGG | - | chr3.3:92958617-92958636 | MS.gene69431:CDS | 40.0% | |
| GATGAATATCTGTGCCTCTT+GGG | - | chr3.3:92958844-92958863 | MS.gene69431:intron | 40.0% | |
| GATGATATGATCGGTTGAAG+TGG | + | chr3.3:92955626-92955645 | None:intergenic | 40.0% | |
| GCGCCTTGTATCATTTGTAA+GGG | - | chr3.3:92958688-92958707 | MS.gene69431:intron | 40.0% | |
| GTATATTTGCGGACCATGTT+AGG | + | chr3.3:92957826-92957845 | None:intergenic | 40.0% | |
| TAAAAAGTGATTGGCAACCC+AGG | + | chr3.3:92957407-92957426 | None:intergenic | 40.0% | |
| TAAGTTTCGAGCAACATGGA+AGG | - | chr3.3:92956556-92956575 | MS.gene69431:intron | 40.0% | |
| TAATGCTCCACTGCAATGTA+GGG | + | chr3.3:92958735-92958754 | None:intergenic | 40.0% | |
| TAGGTTCTCTTTGTCACTGT+TGG | - | chr3.3:92957156-92957175 | MS.gene69431:intron | 40.0% | |
| TATGCCACACCACAAATTCA+AGG | + | chr3.3:92958815-92958834 | None:intergenic | 40.0% | |
| TCCGCAAATATACAAGTGCT+AGG | - | chr3.3:92957833-92957852 | MS.gene69431:intron | 40.0% | |
| TGATGAATATCTGTGCCTCT+TGG | - | chr3.3:92958843-92958862 | MS.gene69431:intron | 40.0% | |
| TGCAAGAAAGTGATGTAGAG+AGG | + | chr3.3:92959056-92959075 | None:intergenic | 40.0% | |
| TGCGCCTTGTATCATTTGTA+AGG | - | chr3.3:92958687-92958706 | MS.gene69431:intron | 40.0% | |
| TGTTGATCTTGCAGAAACTG+AGG | - | chr3.3:92956236-92956255 | MS.gene69431:intron | 40.0% | |
| TTCCCATAGATGGTTCAGAA+CGG | + | chr3.3:92956585-92956604 | None:intergenic | 40.0% | |
| TTGACCTTGAATTTGTGGTG+TGG | - | chr3.3:92958808-92958827 | MS.gene69431:CDS | 40.0% | |
| ! | AGGTTTGGTACACATTCAAC+CGG | - | chr3.3:92957853-92957872 | MS.gene69431:intron | 40.0% |
| ! | CTCTTCAATCAGTTTTTGCC+CGG | + | chr3.3:92957875-92957894 | None:intergenic | 40.0% |
| ! | CTGTGTTTTATGCTTGTCGA+AGG | - | chr3.3:92959330-92959349 | MS.gene69431:CDS | 40.0% |
| ! | GATTGCCAAACCTTTGAAGA+AGG | + | chr3.3:92958090-92958109 | None:intergenic | 40.0% |
| ! | GTAACAGTGTTGAGAAAACG+CGG | + | chr3.3:92955873-92955892 | None:intergenic | 40.0% |
| ! | GTTCAAGAGCGTGTTAACAT+AGG | - | chr3.3:92955795-92955814 | MS.gene69431:CDS | 40.0% |
| ! | TGATTCTCCTACGCTTGTTA+TGG | - | chr3.3:92955908-92955927 | MS.gene69431:intron | 40.0% |
| ! | TGTTTCTGTGGAATTAGCCA+TGG | - | chr3.3:92957628-92957647 | MS.gene69431:intron | 40.0% |
| ! | TTGCATTTGGAGCATTTGCT+AGG | - | chr3.3:92958059-92958078 | MS.gene69431:intron | 40.0% |
| ! | TTGCCAAACCTTTGAAGAAG+GGG | + | chr3.3:92958088-92958107 | None:intergenic | 40.0% |
| !! | AAAGCAGGCTCTATTGACTT+CGG | + | chr3.3:92958239-92958258 | None:intergenic | 40.0% |
| !! | AACCATCTAACTTTAGAGCC+GGG | + | chr3.3:92955831-92955850 | None:intergenic | 40.0% |
| !! | AGCAATGATTCTGAAACGAG+AGG | + | chr3.3:92955988-92956007 | None:intergenic | 40.0% |
| !! | GAACCATCTAACTTTAGAGC+CGG | + | chr3.3:92955832-92955851 | None:intergenic | 40.0% |
| !! | GTAGACCGACATATTGACTT+AGG | - | chr3.3:92957137-92957156 | MS.gene69431:intron | 40.0% |
| AATCACCAATCCCTGGTATC+GGG | - | chr3.3:92957589-92957608 | MS.gene69431:intron | 45.0% | |
| AATGCATTTCGCACGAGTTC+AGG | - | chr3.3:92956982-92957001 | MS.gene69431:intron | 45.0% | |
| AGAAGCTCGCAAGCATATGA+AGG | - | chr3.3:92959149-92959168 | MS.gene69431:intron | 45.0% | |
| ATCTTGCAGAAACTGAGGCA+TGG | - | chr3.3:92956241-92956260 | MS.gene69431:intron | 45.0% | |
| ATGCCCCTTCTTCAAAGGTT+TGG | - | chr3.3:92958082-92958101 | MS.gene69431:intron | 45.0% | |
| CAAATTCAAGGTCAACTCCC+TGG | + | chr3.3:92958803-92958822 | None:intergenic | 45.0% | |
| CATATGCTTGCGAGCTTCTT+GGG | + | chr3.3:92959148-92959167 | None:intergenic | 45.0% | |
| CCATGAACCATAACAAGCGT+AGG | + | chr3.3:92955918-92955937 | None:intergenic | 45.0% | |
| CGACTAGGCAACTACATGTT+TGG | - | chr3.3:92958447-92958466 | MS.gene69431:CDS | 45.0% | |
| CGAGTTCAGGTCAATATTGC+TGG | - | chr3.3:92956995-92957014 | MS.gene69431:intron | 45.0% | |
| CGGGCAAAAACTGATTGAAG+AGG | - | chr3.3:92957873-92957892 | MS.gene69431:intron | 45.0% | |
| CTGTGGAATTAGCCATGGAA+AGG | - | chr3.3:92957633-92957652 | MS.gene69431:intron | 45.0% | |
| GAAAATTCCTTCCCGATACC+AGG | + | chr3.3:92957603-92957622 | None:intergenic | 45.0% | |
| GAAAGTGATGTAGAGAGGTG+AGG | + | chr3.3:92959051-92959070 | None:intergenic | 45.0% | |
| GAATCACCAATCCCTGGTAT+CGG | - | chr3.3:92957588-92957607 | MS.gene69431:intron | 45.0% | |
| GAGCGTGTTAACATAGGTTC+TGG | - | chr3.3:92955801-92955820 | MS.gene69431:CDS | 45.0% | |
| GAGGAATCAAGTCTGCTAAC+TGG | - | chr3.3:92957892-92957911 | MS.gene69431:intron | 45.0% | |
| GGGACCCTGATAATTTCACA+TGG | + | chr3.3:92959177-92959196 | None:intergenic | 45.0% | |
| GGGAGTTGACCTTGAATTTG+TGG | - | chr3.3:92958803-92958822 | MS.gene69431:CDS | 45.0% | |
| GTAAGGGTGATTCCTTTCCA+TGG | + | chr3.3:92957648-92957667 | None:intergenic | 45.0% | |
| GTGAAATTATCAGGGTCCCT+CGG | - | chr3.3:92959178-92959197 | MS.gene69431:intron | 45.0% | |
| GTGACCTCTTAGTCACATGA+AGG | + | chr3.3:92957275-92957294 | None:intergenic | 45.0% | |
| GTGAGGCCTTAACAAGACAT+TGG | + | chr3.3:92959034-92959053 | None:intergenic | 45.0% | |
| GTGCCCACCACATTCATATA+TGG | - | chr3.3:92959093-92959112 | MS.gene69431:CDS | 45.0% | |
| GTGTTCATTGACAACCCAAG+TGG | - | chr3.3:92959296-92959315 | MS.gene69431:CDS | 45.0% | |
| GTTGCCTTCATGTGACTAAG+AGG | - | chr3.3:92957268-92957287 | MS.gene69431:intron | 45.0% | |
| TAATCACTTCTATCGCAGGC+CGG | - | chr3.3:92959266-92959285 | MS.gene69431:intron | 45.0% | |
| TCATATGCTTGCGAGCTTCT+TGG | + | chr3.3:92959149-92959168 | None:intergenic | 45.0% | |
| TGAAATTATCAGGGTCCCTC+GGG | - | chr3.3:92959179-92959198 | MS.gene69431:intron | 45.0% | |
| TGCAATGTAGGGAAGACCTT+GGG | + | chr3.3:92958724-92958743 | None:intergenic | 45.0% | |
| TGCATTTGTGGCAGAGGTTT+AGG | - | chr3.3:92957790-92957809 | MS.gene69431:intron | 45.0% | |
| TGTGACTAAGAGGTCACAAG+TGG | - | chr3.3:92957278-92957297 | MS.gene69431:intron | 45.0% | |
| TTCTGATGCATTTGTGGCAG+AGG | - | chr3.3:92957784-92957803 | MS.gene69431:intron | 45.0% | |
| ! | AGCCGTTCTGAACCATCTAT+GGG | - | chr3.3:92956580-92956599 | MS.gene69431:intron | 45.0% |
| ! | ATCCTGATTTCTGAGGGGAA+TGG | - | chr3.3:92958575-92958594 | MS.gene69431:intron | 45.0% |
| ! | ATTGGTGATTCCATGCTTCG+TGG | + | chr3.3:92957579-92957598 | None:intergenic | 45.0% |
| ! | CTGCTTGGACATTCTTTTGG+TGG | - | chr3.3:92956318-92956337 | MS.gene69431:intron | 45.0% |
| ! | GGTTTGGTACACATTCAACC+GGG | - | chr3.3:92957854-92957873 | MS.gene69431:intron | 45.0% |
| ! | TGATTTCTGAGGGGAATGGT+GGG | - | chr3.3:92958579-92958598 | MS.gene69431:CDS | 45.0% |
| !! | CCTACGCTTGTTATGGTTCA+TGG | - | chr3.3:92955915-92955934 | MS.gene69431:intron | 45.0% |
| !! | TTAATTTTGGTGGGACCTGC+CGG | - | chr3.3:92956494-92956513 | MS.gene69431:intron | 45.0% |
| !!! | TTATTTTAAATTTTAAGATT+AGG | + | chr3.3:92956923-92956942 | None:intergenic | 5.0% |
| ACATGTGCTCCTGGTGATAC+AGG | + | chr3.3:92958545-92958564 | None:intergenic | 50.0% | |
| ACTGACCTTGAGCGCGTATT+TGG | + | chr3.3:92956355-92956374 | None:intergenic | 50.0% | |
| AGCATGGAATCACCAATCCC+TGG | - | chr3.3:92957582-92957601 | MS.gene69431:intron | 50.0% | |
| AGGTCTTCCCTACATTGCAG+TGG | - | chr3.3:92958725-92958744 | MS.gene69431:intron | 50.0% | |
| AGTCAATAGGAGTGGGCAAG+TGG | + | chr3.3:92958349-92958368 | None:intergenic | 50.0% | |
| CAACCCAAGTGGCTTCCATT+CGG | - | chr3.3:92959307-92959326 | MS.gene69431:CDS | 50.0% | |
| CACAAGTGGTAAGACTGCCT+GGG | - | chr3.3:92957292-92957311 | MS.gene69431:intron | 50.0% | |
| CACCATTCCCCTCAGAAATC+AGG | + | chr3.3:92958580-92958599 | None:intergenic | 50.0% | |
| CATGGATACGCTGCTTCTCA+GGG | - | chr3.3:92955933-92955952 | MS.gene69431:intron | 50.0% | |
| CCCTCAGAAATCAGGATGCA+GGG | + | chr3.3:92958572-92958591 | None:intergenic | 50.0% | |
| CCCTGCATCCTGATTTCTGA+GGG | - | chr3.3:92958569-92958588 | MS.gene69431:intron | 50.0% | |
| CCTGCATCCTGATTTCTGAG+GGG | - | chr3.3:92958570-92958589 | MS.gene69431:intron | 50.0% | |
| CGGTTGAAGTGGGAATCCAA+CGG | + | chr3.3:92955615-92955634 | None:intergenic | 50.0% | |
| CTAAGCAGACGATAGCCCTT+CGG | + | chr3.3:92959390-92959409 | None:intergenic | 50.0% | |
| CTAGGATGCCCCTTCTTCAA+AGG | - | chr3.3:92958077-92958096 | MS.gene69431:intron | 50.0% | |
| CTCAGCGGCGATGATATGAT+CGG | + | chr3.3:92955635-92955654 | None:intergenic | 50.0% | |
| CTGCAATGTAGGGAAGACCT+TGG | + | chr3.3:92958725-92958744 | None:intergenic | 50.0% | |
| CTGTGCCTCTTGGGTAAGAA+TGG | - | chr3.3:92958853-92958872 | MS.gene69431:intron | 50.0% | |
| GCAATGTAGGGAAGACCTTG+GGG | + | chr3.3:92958723-92958742 | None:intergenic | 50.0% | |
| GTTTCTTCTGTAAACCCGGC+AGG | + | chr3.3:92956512-92956531 | None:intergenic | 50.0% | |
| TAAGCAGACGATAGCCCTTC+GGG | + | chr3.3:92959389-92959408 | None:intergenic | 50.0% | |
| TAAGGGCTCTTTAAGCCCCA+AGG | - | chr3.3:92958705-92958724 | MS.gene69431:intron | 50.0% | |
| TCACAAGTGGTAAGACTGCC+TGG | - | chr3.3:92957291-92957310 | MS.gene69431:intron | 50.0% | |
| TCATGGATACGCTGCTTCTC+AGG | - | chr3.3:92955932-92955951 | MS.gene69431:intron | 50.0% | |
| TCCCTGCATCCTGATTTCTG+AGG | - | chr3.3:92958568-92958587 | MS.gene69431:intron | 50.0% | |
| TGCTTCCAAATACGCGCTCA+AGG | - | chr3.3:92956347-92956366 | MS.gene69431:intron | 50.0% | |
| TGGCAGAGGTTTAGGTCCTT+GGG | - | chr3.3:92957798-92957817 | MS.gene69431:intron | 50.0% | |
| TTTCTTGCAGTGCTCCAGAG+TGG | - | chr3.3:92959067-92959086 | MS.gene69431:CDS | 50.0% | |
| ! | AACATAGGTTCTGGTCCTCC+CGG | - | chr3.3:92955810-92955829 | MS.gene69431:CDS | 50.0% |
| ! | AAGCAGAAGGAGCTTGTTCC+TGG | - | chr3.3:92957386-92957405 | MS.gene69431:intron | 50.0% |
| ! | AGCAGAAGGAGCTTGTTCCT+GGG | - | chr3.3:92957387-92957406 | MS.gene69431:intron | 50.0% |
| ! | CTGATTTCTGAGGGGAATGG+TGG | - | chr3.3:92958578-92958597 | MS.gene69431:CDS | 50.0% |
| ! | GAGCCGTTCTGAACCATCTA+TGG | - | chr3.3:92956579-92956598 | MS.gene69431:intron | 50.0% |
| ! | GATTTCTGAGGGGAATGGTG+GGG | - | chr3.3:92958580-92958599 | MS.gene69431:CDS | 50.0% |
| !! | CATCTAACTTTAGAGCCGGG+AGG | + | chr3.3:92955828-92955847 | None:intergenic | 50.0% |
| !! | CTCCCGGCTCTAAAGTTAGA+TGG | - | chr3.3:92955826-92955845 | MS.gene69431:CDS | 50.0% |
| !! | GGAAAGAAGGCGTTTCTCAG+CGG | + | chr3.3:92955650-92955669 | None:intergenic | 50.0% |
| !! | TAATTTTGGTGGGACCTGCC+GGG | - | chr3.3:92956495-92956514 | MS.gene69431:intron | 50.0% |
| ACAGCCGAATGGAAGCCACT+TGG | + | chr3.3:92959314-92959333 | None:intergenic | 55.0% | |
| ACATTGGCGGCCAAAGCTAG+TGG | - | chr3.3:92958013-92958032 | MS.gene69431:intron | 55.0% | |
| AGGTCCTTGGGGTCCTAACA+TGG | - | chr3.3:92957810-92957829 | MS.gene69431:intron | 55.0% | |
| ATTGGCGGCCAAAGCTAGTG+GGG | - | chr3.3:92958015-92958034 | MS.gene69431:intron | 55.0% | |
| CAGCCGAATGGAAGCCACTT+GGG | + | chr3.3:92959313-92959332 | None:intergenic | 55.0% | |
| CATTGGCGGCCAAAGCTAGT+GGG | - | chr3.3:92958014-92958033 | MS.gene69431:intron | 55.0% | |
| CCACGGAAGAATCCTTTCCC+AGG | + | chr3.3:92957312-92957331 | None:intergenic | 55.0% | |
| CCCCTCAGAAATCAGGATGC+AGG | + | chr3.3:92958573-92958592 | None:intergenic | 55.0% | |
| CCTGGGAAAGGATTCTTCCG+TGG | - | chr3.3:92957309-92957328 | MS.gene69431:intron | 55.0% | |
| GAGAAAACGCGGCTCGTTAC+TGG | + | chr3.3:92955862-92955881 | None:intergenic | 55.0% | |
| GGCAGAGGTTTAGGTCCTTG+GGG | - | chr3.3:92957799-92957818 | MS.gene69431:intron | 55.0% | |
| GTGGCAGAGGTTTAGGTCCT+TGG | - | chr3.3:92957797-92957816 | MS.gene69431:intron | 55.0% | |
| GTGGTAAGACTGCCTGGGAA+AGG | - | chr3.3:92957297-92957316 | MS.gene69431:intron | 55.0% | |
| TCCTTCCCGATACCAGGGAT+TGG | + | chr3.3:92957597-92957616 | None:intergenic | 55.0% | |
| ! | ACACAGCTCCCCACTAGCTT+TGG | + | chr3.3:92958026-92958045 | None:intergenic | 55.0% |
| ! | ACCAATCCCTGGTATCGGGA+AGG | - | chr3.3:92957593-92957612 | MS.gene69431:intron | 55.0% |
| ! | GCGGCTCGTTACTGGTTGAA+CGG | + | chr3.3:92955854-92955873 | None:intergenic | 55.0% |
| ! | GCTTCTGGTCTTCACTCCGT+TGG | - | chr3.3:92955596-92955615 | MS.gene69431:CDS | 55.0% |
| ACTGTGGGGAGGGGGAGTAA+AGG | - | chr3.3:92958603-92958622 | MS.gene69431:CDS | 60.0% | |
| CAGGGATGCACATGTGCTCC+TGG | + | chr3.3:92958554-92958573 | None:intergenic | 60.0% | |
| CGGACCATGTTAGGACCCCA+AGG | + | chr3.3:92957817-92957836 | None:intergenic | 60.0% | |
| CTGTGGGGAGGGGGAGTAAA+GGG | - | chr3.3:92958604-92958623 | MS.gene69431:CDS | 60.0% | |
| ! | AATGGTGGGGACTGTGGGGA+GGG | - | chr3.3:92958593-92958612 | MS.gene69431:CDS | 60.0% |
| ! | AGGGGAATGGTGGGGACTGT+GGG | - | chr3.3:92958588-92958607 | MS.gene69431:CDS | 60.0% |
| !! | GTGGTGGGCACTTTCCACTC+TGG | + | chr3.3:92959084-92959103 | None:intergenic | 60.0% |
| ! | ATGGTGGGGACTGTGGGGAG+GGG | - | chr3.3:92958594-92958613 | MS.gene69431:CDS | 65.0% |
| ! | GAATGGTGGGGACTGTGGGG+AGG | - | chr3.3:92958592-92958611 | MS.gene69431:CDS | 65.0% |
| ! | GAGGGGAATGGTGGGGACTG+TGG | - | chr3.3:92958587-92958606 | MS.gene69431:CDS | 65.0% |
| ! | GGGGAATGGTGGGGACTGTG+GGG | - | chr3.3:92958589-92958608 | MS.gene69431:CDS | 65.0% |
| TGGTGGGGACTGTGGGGAGG+GGG | - | chr3.3:92958595-92958614 | MS.gene69431:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 92955535 | 92959409 | 92955535 | ID=MS.gene69431 |
| chr3.3 | mRNA | 92955535 | 92959409 | 92955535 | ID=MS.gene69431.t1;Parent=MS.gene69431 |
| chr3.3 | exon | 92959267 | 92959409 | 92959267 | ID=MS.gene69431.t1.exon1;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92959267 | 92959409 | 92959267 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92958923 | 92959159 | 92958923 | ID=MS.gene69431.t1.exon2;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92958923 | 92959159 | 92958923 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92958784 | 92958830 | 92958784 | ID=MS.gene69431.t1.exon3;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92958784 | 92958830 | 92958784 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92958576 | 92958694 | 92958576 | ID=MS.gene69431.t1.exon4;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92958576 | 92958694 | 92958576 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92958311 | 92958471 | 92958311 | ID=MS.gene69431.t1.exon5;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92958311 | 92958471 | 92958311 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92957031 | 92957140 | 92957031 | ID=MS.gene69431.t1.exon6;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92957031 | 92957140 | 92957031 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92956846 | 92956945 | 92956846 | ID=MS.gene69431.t1.exon7;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92956846 | 92956945 | 92956846 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92955744 | 92955867 | 92955744 | ID=MS.gene69431.t1.exon8;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92955744 | 92955867 | 92955744 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| chr3.3 | exon | 92955535 | 92955660 | 92955535 | ID=MS.gene69431.t1.exon9;Parent=MS.gene69431.t1 |
| chr3.3 | CDS | 92955535 | 92955660 | 92955535 | ID=cds.MS.gene69431.t1;Parent=MS.gene69431.t1 |
| Gene Sequence |
| Protein sequence |
