Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69768.t1 | XP_013461156.1 | 98.3 | 476 | 8 | 0 | 1 | 476 | 1 | 476 | 2.20E-243 | 851.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69768.t1 | A0A072VAG8 | 98.3 | 476 | 8 | 0 | 1 | 476 | 1 | 476 | 1.6e-243 | 851.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051648 | MS.gene69768 | 0.800825 | 1.20E-48 | -1.69E-46 |
| MS.gene055204 | MS.gene69768 | 0.823642 | 1.24E-53 | -1.69E-46 |
| MS.gene055849 | MS.gene69768 | -0.8129 | 3.36E-51 | -1.69E-46 |
| MS.gene055942 | MS.gene69768 | 0.803529 | 3.34E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene69768 | 0.812217 | 4.74E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69768.t1 | MTR_3g081490 | 98.529 | 476 | 7 | 0 | 1 | 476 | 1 | 476 | 0.0 | 970 |
| MS.gene69768.t1 | MTR_3g081490 | 98.942 | 378 | 4 | 0 | 1 | 378 | 1 | 378 | 0.0 | 764 |
| MS.gene69768.t1 | MTR_3g081490 | 97.143 | 385 | 11 | 0 | 1 | 385 | 1 | 385 | 0.0 | 764 |
| MS.gene69768.t1 | MTR_4g059540 | 47.100 | 431 | 200 | 9 | 45 | 468 | 95 | 504 | 2.26e-118 | 357 |
| MS.gene69768.t1 | MTR_4g059540 | 47.606 | 376 | 173 | 8 | 45 | 417 | 95 | 449 | 1.73e-101 | 312 |
| MS.gene69768.t1 | MTR_1g064710 | 41.928 | 415 | 203 | 11 | 67 | 468 | 97 | 486 | 2.49e-101 | 313 |
| MS.gene69768.t1 | MTR_2g094130 | 44.588 | 388 | 197 | 9 | 71 | 455 | 89 | 461 | 1.12e-98 | 305 |
| MS.gene69768.t1 | MTR_2g094130 | 44.020 | 393 | 197 | 10 | 71 | 455 | 89 | 466 | 2.59e-96 | 300 |
| MS.gene69768.t1 | MTR_1g064710 | 44.286 | 350 | 161 | 9 | 67 | 406 | 97 | 422 | 3.52e-89 | 279 |
| MS.gene69768.t1 | MTR_1g064710 | 45.031 | 322 | 143 | 9 | 67 | 378 | 97 | 394 | 6.37e-78 | 249 |
| MS.gene69768.t1 | MTR_2g020520 | 36.256 | 422 | 218 | 14 | 26 | 438 | 34 | 413 | 5.09e-67 | 221 |
| MS.gene69768.t1 | MTR_2g020520 | 35.934 | 423 | 220 | 13 | 25 | 438 | 32 | 412 | 1.48e-66 | 220 |
| MS.gene69768.t1 | MTR_2g020520 | 46.262 | 214 | 112 | 2 | 225 | 438 | 94 | 304 | 1.27e-64 | 211 |
| MS.gene69768.t1 | MTR_1g064710 | 42.857 | 294 | 134 | 9 | 67 | 350 | 97 | 366 | 2.13e-62 | 207 |
| MS.gene69768.t1 | MTR_2g094130 | 45.035 | 282 | 138 | 8 | 71 | 349 | 89 | 356 | 2.39e-60 | 204 |
| MS.gene69768.t1 | MTR_2g094130 | 45.035 | 282 | 138 | 8 | 71 | 349 | 89 | 356 | 2.94e-60 | 204 |
| MS.gene69768.t1 | MTR_4g059540 | 43.110 | 283 | 139 | 7 | 45 | 324 | 95 | 358 | 1.36e-54 | 187 |
| MS.gene69768.t1 | MTR_7g075740 | 37.963 | 216 | 114 | 5 | 238 | 451 | 41 | 238 | 7.26e-42 | 149 |
| MS.gene69768.t1 | MTR_7g075700 | 35.887 | 248 | 117 | 5 | 230 | 451 | 25 | 256 | 8.24e-41 | 147 |
| MS.gene69768.t1 | MTR_4g459440 | 57.576 | 99 | 42 | 0 | 352 | 450 | 1 | 99 | 2.00e-34 | 126 |
| MS.gene69768.t1 | MTR_7g065920 | 41.304 | 92 | 41 | 3 | 214 | 294 | 80 | 169 | 3.79e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69768.t1 | AT5G60580 | 51.554 | 386 | 161 | 9 | 55 | 436 | 84 | 447 | 7.05e-118 | 355 |
| MS.gene69768.t1 | AT5G60580 | 51.554 | 386 | 161 | 9 | 55 | 436 | 84 | 447 | 7.05e-118 | 355 |
| MS.gene69768.t1 | AT5G60580 | 47.748 | 444 | 184 | 12 | 18 | 436 | 34 | 454 | 3.97e-115 | 348 |
| MS.gene69768.t1 | AT5G60580 | 47.748 | 444 | 184 | 12 | 18 | 436 | 34 | 454 | 3.97e-115 | 348 |
| MS.gene69768.t1 | AT3G09760 | 43.045 | 381 | 188 | 10 | 76 | 449 | 115 | 473 | 3.05e-95 | 296 |
| MS.gene69768.t1 | AT5G03180 | 40.933 | 386 | 188 | 13 | 76 | 451 | 97 | 452 | 1.85e-89 | 281 |
| MS.gene69768.t1 | AT5G03180 | 40.722 | 388 | 190 | 13 | 76 | 451 | 62 | 421 | 1.99e-89 | 280 |
| MS.gene69768.t1 | AT5G03180 | 40.722 | 388 | 190 | 13 | 76 | 451 | 97 | 456 | 6.73e-89 | 279 |
| MS.gene69768.t1 | AT3G06330 | 36.609 | 407 | 218 | 9 | 33 | 438 | 48 | 415 | 6.53e-68 | 224 |
| MS.gene69768.t1 | AT5G03180 | 41.538 | 325 | 154 | 12 | 76 | 388 | 97 | 397 | 9.10e-68 | 223 |
| MS.gene69768.t1 | AT5G03180 | 41.284 | 327 | 156 | 12 | 76 | 388 | 97 | 401 | 2.71e-67 | 221 |
| MS.gene69768.t1 | AT3G06330 | 43.866 | 269 | 138 | 3 | 171 | 439 | 50 | 305 | 1.53e-66 | 216 |
| MS.gene69768.t1 | AT3G06330 | 47.556 | 225 | 117 | 1 | 216 | 440 | 25 | 248 | 1.92e-65 | 212 |
| MS.gene69768.t1 | AT5G18760 | 35.040 | 371 | 212 | 7 | 65 | 435 | 56 | 397 | 4.48e-53 | 184 |
| MS.gene69768.t1 | AT3G06330 | 35.465 | 344 | 182 | 9 | 33 | 375 | 48 | 352 | 3.20e-43 | 156 |
| MS.gene69768.t1 | AT5G18760 | 34.386 | 285 | 158 | 7 | 65 | 349 | 56 | 311 | 5.86e-32 | 125 |
| MS.gene69768.t1 | AT2G37950 | 46.774 | 62 | 30 | 2 | 234 | 294 | 80 | 139 | 1.98e-12 | 66.6 |
| MS.gene69768.t1 | AT5G05830 | 35.652 | 115 | 63 | 3 | 240 | 344 | 79 | 192 | 6.57e-12 | 65.1 |
| MS.gene69768.t1 | AT5G01070 | 44.615 | 65 | 30 | 2 | 234 | 294 | 74 | 136 | 4.78e-11 | 62.8 |
Find 100 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCAACATTCACTGGATT+TGG | 0.151106 | 3.4:-77383507 | MS.gene69768:CDS |
| CTACAAACTGCTTCTTCTTC+TGG | 0.229948 | 3.4:+77386017 | None:intergenic |
| TAAGACCTGCAACAGATTCT+AGG | 0.241872 | 3.4:-77386552 | MS.gene69768:CDS |
| GTGTACCAGGTTTCAGATTT+GGG | 0.251435 | 3.4:-77384410 | MS.gene69768:intron |
| AGTGTACCAGGTTTCAGATT+TGG | 0.280953 | 3.4:-77384411 | MS.gene69768:intron |
| TACTTTCTGATAGGAGCTTT+AGG | 0.312686 | 3.4:-77386981 | MS.gene69768:CDS |
| AGATGAAAGACTAGGCCTTC+TGG | 0.314784 | 3.4:+77387146 | None:intergenic |
| TTTCAACATTCACTGGATTT+GGG | 0.323066 | 3.4:-77383506 | MS.gene69768:CDS |
| GTTACTCCAATTGCTAATTC+AGG | 0.332975 | 3.4:-77386796 | MS.gene69768:CDS |
| TTCTTCTCTTCTTCATCATC+AGG | 0.347218 | 3.4:-77387785 | MS.gene69768:intron |
| CCCATCTGATATATTCCATT+AGG | 0.353626 | 3.4:+77383460 | None:intergenic |
| GCACTTTCTAGTGTCCTTGT+TGG | 0.354525 | 3.4:+77387114 | None:intergenic |
| CAGCATGAATTCTCTCCTAA+TGG | 0.357709 | 3.4:-77383475 | MS.gene69768:CDS |
| TTAGCGGCTTTGACATTAAC+CGG | 0.367120 | 3.4:+77386577 | None:intergenic |
| CAGAAGAAGAAGCAGTTTGT+AGG | 0.369236 | 3.4:-77386016 | MS.gene69768:CDS |
| ATCATCAGATAATGGTCCTT+TGG | 0.385393 | 3.4:-77386902 | MS.gene69768:CDS |
| ATATCAGATGGGAAACAAAT+AGG | 0.392592 | 3.4:-77383449 | MS.gene69768:CDS |
| AGAGAGCAGTAACTAATTAC+AGG | 0.396825 | 3.4:-77385767 | MS.gene69768:intron |
| GATACTTTATCATCAGATAA+TGG | 0.405699 | 3.4:-77386910 | MS.gene69768:CDS |
| TTTGGTGGAGCTTGCGGAAG+GGG | 0.407562 | 3.4:-77385988 | MS.gene69768:CDS |
| CTAGTCCTCCGACTGTTGTT+CGG | 0.409328 | 3.4:-77385812 | MS.gene69768:CDS |
| GTTCTTCTTTCAACATTCAC+TGG | 0.409765 | 3.4:-77383513 | MS.gene69768:CDS |
| AGAGAAGAATCTGACATCAT+TGG | 0.413265 | 3.4:+77387799 | None:intergenic |
| TTGCTTTCTGGAGGAACTAC+TGG | 0.417824 | 3.4:-77384607 | MS.gene69768:intron |
| AGCAGTTTGTAGGATTTGTT+TGG | 0.425476 | 3.4:-77386006 | MS.gene69768:CDS |
| CAGTGAGCAGGAGTTACATA+TGG | 0.426184 | 3.4:-77383696 | MS.gene69768:CDS |
| ATAATAAGCCTTCAACTTCA+AGG | 0.427266 | 3.4:-77386879 | MS.gene69768:CDS |
| ATCTATCATTGCTTCAACCA+TGG | 0.437805 | 3.4:-77384333 | MS.gene69768:CDS |
| TCTGCACCTGAATTAGCAAT+TGG | 0.438182 | 3.4:+77386790 | None:intergenic |
| AGACGCCTAGAATCTGTTGC+AGG | 0.448575 | 3.4:+77386547 | None:intergenic |
| ACTTTGGTAGAATGTGGCCT+TGG | 0.449976 | 3.4:+77387024 | None:intergenic |
| TGCAACAGATTCTAGGCGTC+TGG | 0.456493 | 3.4:-77386545 | MS.gene69768:CDS |
| AATAGAATATATGCGCAAAC+AGG | 0.461916 | 3.4:+77383641 | None:intergenic |
| GAATGAGACCTTGAAGTTGA+AGG | 0.470115 | 3.4:+77386871 | None:intergenic |
| AGAGTGTTACTGGAAGATTC+CGG | 0.479931 | 3.4:+77385844 | None:intergenic |
| GAATTAGCAATTGGAGTAAC+CGG | 0.483095 | 3.4:+77386799 | None:intergenic |
| TTGGTAGAATGTGGCCTTGG+TGG | 0.484999 | 3.4:+77387027 | None:intergenic |
| ACAGGATGACAAATGCGAAC+TGG | 0.485665 | 3.4:+77383659 | None:intergenic |
| GCAGGAGAAAGGCAATGAAA+TGG | 0.491496 | 3.4:+77384373 | None:intergenic |
| TCTATCATTGCTTCAACCAT+GGG | 0.492217 | 3.4:-77384332 | MS.gene69768:intron |
| TTTCATAGAGGACTTGACTT+TGG | 0.494952 | 3.4:+77387008 | None:intergenic |
| TAAAGCGGCGCATTCGTTAC+CGG | 0.496773 | 3.4:-77386818 | MS.gene69768:CDS |
| CCTTGGTGGCAGTCCTCTAG+TGG | 0.497730 | 3.4:+77387041 | None:intergenic |
| TGTTTGGTGGAGCTTGCGGA+AGG | 0.499210 | 3.4:-77385990 | MS.gene69768:CDS |
| GGCAGTCCTCTAGTGGAACC+TGG | 0.502946 | 3.4:+77387048 | None:intergenic |
| TGTTGCAGGTCTTAAATTAG+CGG | 0.503069 | 3.4:+77386561 | None:intergenic |
| CTCTTGCATTGAATCACTGC+GGG | 0.504151 | 3.4:+77386471 | None:intergenic |
| TTCTTCTTCTGGAATATCCT+CGG | 0.504900 | 3.4:+77386028 | None:intergenic |
| GAAACACCATCAGTAGTTGC+TGG | 0.505889 | 3.4:+77386496 | None:intergenic |
| ACCACTTTACTGCACAGTCT+TGG | 0.510134 | 3.4:+77385913 | None:intergenic |
| TCCTAATGGAATATATCAGA+TGG | 0.511034 | 3.4:-77383461 | MS.gene69768:CDS |
| AGTGATTCAATGCAAGAGAT+TGG | 0.513825 | 3.4:-77386466 | MS.gene69768:intron |
| ATGCTAACCAAGACAAGTAC+TGG | 0.518939 | 3.4:+77384642 | None:intergenic |
| AACGTATGCCGAACAACAGT+CGG | 0.522051 | 3.4:+77385804 | None:intergenic |
| ACCAAGACTGTGCAGTAAAG+TGG | 0.528389 | 3.4:-77385914 | MS.gene69768:CDS |
| GTAAAGTGGTTTAGTATCAA+AGG | 0.531954 | 3.4:-77385900 | MS.gene69768:CDS |
| AGACCTAAAATGCAGGAGAA+AGG | 0.534858 | 3.4:+77384362 | None:intergenic |
| AGTTTGTAGGATTTGTTTGG+TGG | 0.537738 | 3.4:-77386003 | MS.gene69768:CDS |
| CCATCAGTAGTTGCTGGCTG+TGG | 0.539566 | 3.4:+77386502 | None:intergenic |
| ATGTCTGCAAGCAGGATGTC+CGG | 0.544697 | 3.4:-77385863 | MS.gene69768:CDS |
| TTGGTGGAGCTTGCGGAAGG+GGG | 0.544999 | 3.4:-77385987 | MS.gene69768:CDS |
| TGAAAGGAGACCTAAAATGC+AGG | 0.547003 | 3.4:+77384355 | None:intergenic |
| GTTTGGTGGAGCTTGCGGAA+GGG | 0.550368 | 3.4:-77385989 | MS.gene69768:CDS |
| GGATGTACCAGTACTTGTCT+TGG | 0.550915 | 3.4:-77384649 | MS.gene69768:CDS |
| TGCGCCGCTTTACTCGATGA+AGG | 0.559142 | 3.4:+77386829 | None:intergenic |
| AATGAAATGGCGAGAGCACG+TGG | 0.562922 | 3.4:+77384386 | None:intergenic |
| GGTCCTACATTATCAAGTCC+AGG | 0.565636 | 3.4:-77387066 | MS.gene69768:CDS |
| TGTTAATTTCACAGTCCAGA+AGG | 0.566940 | 3.4:-77387161 | MS.gene69768:intron |
| CTTGTAGCTTAATGTGAGTG+CGG | 0.568172 | 3.4:-77383544 | MS.gene69768:intron |
| TGCATCCTTTGCAGTTGATG+TGG | 0.568430 | 3.4:+77383363 | None:intergenic |
| GTTGAAGGCTTATTATCCAA+AGG | 0.569830 | 3.4:+77386886 | None:intergenic |
| GATTTGTTTGGTGGAGCTTG+CGG | 0.571135 | 3.4:-77385994 | MS.gene69768:CDS |
| TAATGTAGGACCATCTGTCT+TGG | 0.572242 | 3.4:+77387077 | None:intergenic |
| TTGAAGCAATGATAGATGAA+AGG | 0.581811 | 3.4:+77384339 | None:intergenic |
| GAATCTAACTTTGATGGAGA+AGG | 0.587506 | 3.4:-77387851 | None:intergenic |
| AGTGAGCAGGAGTTACATAT+GGG | 0.587689 | 3.4:-77383695 | MS.gene69768:CDS |
| CCTAATGGAATATATCAGAT+GGG | 0.587851 | 3.4:-77383460 | MS.gene69768:CDS |
| AGGATGGACTGCAGTTGCAA+AGG | 0.592249 | 3.4:-77385954 | MS.gene69768:CDS |
| GACTTGACTTTGGTAGAATG+TGG | 0.592551 | 3.4:+77387018 | None:intergenic |
| TCAAGTCCAGGTTCCACTAG+AGG | 0.596293 | 3.4:-77387054 | MS.gene69768:CDS |
| GACATGTGATGTCTGCAAGC+AGG | 0.596981 | 3.4:-77385871 | MS.gene69768:CDS |
| AGTCATTGAAGATGCTTCCG+AGG | 0.600332 | 3.4:-77386045 | MS.gene69768:CDS |
| TCAGGTGCAGAGAATGTACA+TGG | 0.600495 | 3.4:-77386778 | MS.gene69768:CDS |
| CCACTAGAGGACTGCCACCA+AGG | 0.602093 | 3.4:-77387041 | MS.gene69768:CDS |
| CCACAGCCAGCAACTACTGA+TGG | 0.604437 | 3.4:-77386502 | MS.gene69768:CDS |
| TGTACATGGAAGACATGTAG+AGG | 0.604726 | 3.4:-77386764 | MS.gene69768:CDS |
| GTTCCCTTCATCGAGTAAAG+CGG | 0.605134 | 3.4:-77386833 | MS.gene69768:CDS |
| TCATCTTCTACCAAGACAGA+TGG | 0.609887 | 3.4:-77387087 | MS.gene69768:CDS |
| TATACTCTACAGGATCTGGC+AGG | 0.611321 | 3.4:-77384670 | MS.gene69768:intron |
| GACAACCACATCAACTGCAA+AGG | 0.622140 | 3.4:-77383368 | MS.gene69768:CDS |
| GCGCCGCTTTACTCGATGAA+GGG | 0.624936 | 3.4:+77386830 | None:intergenic |
| CTAACTTTGATGGAGAAGGA+AGG | 0.627321 | 3.4:-77387847 | None:intergenic |
| GAACCTGGACTTGATAATGT+AGG | 0.628266 | 3.4:+77387063 | None:intergenic |
| CATCTCTACAAATACCAACA+AGG | 0.638179 | 3.4:-77387128 | MS.gene69768:CDS |
| ATTTGTAGAGATGAAAGACT+AGG | 0.650609 | 3.4:+77387138 | None:intergenic |
| CATGGAAGACATGTAGAGGG+TGG | 0.692052 | 3.4:-77386760 | MS.gene69768:CDS |
| GTACATGGAAGACATGTAGA+GGG | 0.703736 | 3.4:-77386763 | MS.gene69768:CDS |
| TCTCTTGCATTGAATCACTG+CGG | 0.705550 | 3.4:+77386470 | None:intergenic |
| GTATGCCGAACAACAGTCGG+AGG | 0.720782 | 3.4:+77385807 | None:intergenic |
| ATGAAATGGCGAGAGCACGT+GGG | 0.733732 | 3.4:+77384387 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTTTATAGATATTAAAT+AGG | - | chr3.4:77384910-77384929 | MS.gene69768:intron | 10.0% |
| !!! | AATTTATAATTTTTAGCTTT+TGG | - | chr3.4:77383555-77383574 | MS.gene69768:intron | 10.0% |
| !!! | ATATTTTTTCATTTTCTTTT+TGG | - | chr3.4:77386931-77386950 | MS.gene69768:CDS | 10.0% |
| !!! | ATTTATAATTTTTAGCTTTT+GGG | - | chr3.4:77383556-77383575 | MS.gene69768:intron | 10.0% |
| !!! | TATTTTTTCATTTTCTTTTT+GGG | - | chr3.4:77386932-77386951 | MS.gene69768:CDS | 10.0% |
| !!! | TTTTAAATATGTTTTTTTGT+TGG | - | chr3.4:77387463-77387482 | MS.gene69768:intron | 10.0% |
| !! | AATATTGGAGAAAATAAAAA+AGG | + | chr3.4:77383596-77383615 | None:intergenic | 15.0% |
| !! | ACAACCAAAAAAAAAAATAT+TGG | + | chr3.4:77383611-77383630 | None:intergenic | 15.0% |
| !! | TATTTGAACAATATTCATAT+GGG | + | chr3.4:77386981-77387000 | None:intergenic | 15.0% |
| !! | TTATTTGAACAATATTCATA+TGG | + | chr3.4:77386982-77387001 | None:intergenic | 15.0% |
| !!! | AATTTTTCTTTAGATCAAAT+GGG | - | chr3.4:77383494-77383513 | MS.gene69768:CDS | 15.0% |
| !!! | TAATTTTTCTTTAGATCAAA+TGG | - | chr3.4:77383493-77383512 | MS.gene69768:CDS | 15.0% |
| !!! | TTCTCCAATATTTTTTTTTT+TGG | - | chr3.4:77383604-77383623 | MS.gene69768:intron | 15.0% |
| !!! | TTTTATCATAAACCATATTT+CGG | - | chr3.4:77385962-77385981 | MS.gene69768:CDS | 15.0% |
| !! | AAAAACTAGATTGCTAAAAA+AGG | + | chr3.4:77383895-77383914 | None:intergenic | 20.0% |
| !! | AAATACATCAAACTCAAATT+TGG | + | chr3.4:77383963-77383982 | None:intergenic | 20.0% |
| !! | AAATTTGGTACATTAAAATG+TGG | + | chr3.4:77383948-77383967 | None:intergenic | 20.0% |
| !! | AATGACACAAAAATATCTAA+TGG | + | chr3.4:77383806-77383825 | None:intergenic | 20.0% |
| !! | AGTGACATAAAAATATCTAA+TGG | + | chr3.4:77383923-77383942 | None:intergenic | 20.0% |
| !! | ATACAAAACAATCTACTATT+TGG | + | chr3.4:77386331-77386350 | None:intergenic | 20.0% |
| !! | ATATTTGGAAATTAATGAGT+TGG | + | chr3.4:77385989-77386008 | None:intergenic | 20.0% |
| !! | ATCTCTTCATAAATATTCAT+AGG | + | chr3.4:77384945-77384964 | None:intergenic | 20.0% |
| !! | ATGTTAAAAACAATGAAACA+CGG | + | chr3.4:77387290-77387309 | None:intergenic | 20.0% |
| !! | ATTTGAACAATATTCATATG+GGG | + | chr3.4:77386980-77386999 | None:intergenic | 20.0% |
| !! | CTAATTATAATATACTCTAC+AGG | - | chr3.4:77386502-77386521 | MS.gene69768:CDS | 20.0% |
| !! | CTATAAAGATAAAAAGATAG+AGG | + | chr3.4:77384901-77384920 | None:intergenic | 20.0% |
| !! | GAGTATATTATAATTAGAGA+AGG | + | chr3.4:77386499-77386518 | None:intergenic | 20.0% |
| !! | TAAAATGATCAAACAAAGAT+CGG | + | chr3.4:77386608-77386627 | None:intergenic | 20.0% |
| !! | TCTATAATTTCATGTTTGTT+AGG | + | chr3.4:77385820-77385839 | None:intergenic | 20.0% |
| !! | TCTCTTCATAAATATTCATA+GGG | + | chr3.4:77384944-77384963 | None:intergenic | 20.0% |
| !! | TGAAAAATTTACTTTCTGAT+AGG | - | chr3.4:77384192-77384211 | MS.gene69768:intron | 20.0% |
| !! | TTATAGTGAAGATTTCAAAA+GGG | + | chr3.4:77384788-77384807 | None:intergenic | 20.0% |
| !! | TTCTAGATAATCTTGTAATT+TGG | + | chr3.4:77385561-77385580 | None:intergenic | 20.0% |
| !!! | AGAAAGTAAATTTTTCATAG+AGG | + | chr3.4:77384189-77384208 | None:intergenic | 20.0% |
| !!! | AGAAAGTATTAGGAAATATT+TGG | + | chr3.4:77386004-77386023 | None:intergenic | 20.0% |
| !!! | ATTATTTGTTGATTAAGATG+TGG | + | chr3.4:77383831-77383850 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATTTGTACAAGA+TGG | - | chr3.4:77386723-77386742 | MS.gene69768:intron | 20.0% |
| !!! | GCGAAAATAATAAAAAGTAT+TGG | + | chr3.4:77385600-77385619 | None:intergenic | 20.0% |
| !!! | TTATGATTTTGTTTCAGATT+AGG | + | chr3.4:77387062-77387081 | None:intergenic | 20.0% |
| !!! | TTTTACTAGGCAAATATATT+AGG | - | chr3.4:77386159-77386178 | MS.gene69768:intron | 20.0% |
| ! | AAGGTTAATCTGTATGTAAA+TGG | - | chr3.4:77385783-77385802 | MS.gene69768:CDS | 25.0% |
| ! | AATTATGCTACATAAGCAAA+AGG | + | chr3.4:77383478-77383497 | None:intergenic | 25.0% |
| ! | AGAATGGAACAATTATTTGT+CGG | + | chr3.4:77383747-77383766 | None:intergenic | 25.0% |
| ! | ATGTAACAAATAACTTGAGA+TGG | + | chr3.4:77386234-77386253 | None:intergenic | 25.0% |
| ! | ATTATGCTACATAAGCAAAA+GGG | + | chr3.4:77383477-77383496 | None:intergenic | 25.0% |
| ! | GACTTATTCATAAAACATGA+TGG | + | chr3.4:77387592-77387611 | None:intergenic | 25.0% |
| ! | GATACTTTATCATCAGATAA+TGG | - | chr3.4:77384272-77384291 | MS.gene69768:intron | 25.0% |
| ! | GATTATTGTAACAAGTTACT+AGG | + | chr3.4:77387407-77387426 | None:intergenic | 25.0% |
| ! | GGTTTATGATAAAAACATCA+TGG | + | chr3.4:77385956-77385975 | None:intergenic | 25.0% |
| ! | GTTATAGTGAAGATTTCAAA+AGG | + | chr3.4:77384789-77384808 | None:intergenic | 25.0% |
| ! | TATAAATGTGACAACTTACT+AGG | - | chr3.4:77386111-77386130 | MS.gene69768:intron | 25.0% |
| ! | TCTCTTTCAATAATAGTTTC+AGG | + | chr3.4:77386381-77386400 | None:intergenic | 25.0% |
| ! | TGGTAAATCTTCATGATATA+TGG | - | chr3.4:77384736-77384755 | MS.gene69768:intron | 25.0% |
| ! | TTGAATGTAATCACATTCAT+TGG | + | chr3.4:77387215-77387234 | None:intergenic | 25.0% |
| ! | TTTAGCAAGAATTGGAATAA+AGG | - | chr3.4:77387131-77387150 | MS.gene69768:CDS | 25.0% |
| ! | TTTCAAAGAAAGAAGCAAAA+GGG | + | chr3.4:77383438-77383457 | None:intergenic | 25.0% |
| !! | AATTCTGTAATAACCTTTTC+TGG | + | chr3.4:77385875-77385894 | None:intergenic | 25.0% |
| !! | TCTCAGTTTCTTTAGTTTAT+AGG | + | chr3.4:77386300-77386319 | None:intergenic | 25.0% |
| !! | TTTAGAGCGTTATTTAAGAA+AGG | + | chr3.4:77386258-77386277 | None:intergenic | 25.0% |
| !! | TTTTCAAAGAAAGAAGCAAA+AGG | + | chr3.4:77383439-77383458 | None:intergenic | 25.0% |
| !!! | AAACTATCACAGAAAGTATT+AGG | + | chr3.4:77386014-77386033 | None:intergenic | 25.0% |
| !!! | AGAATTTGCTCTTTGAAATT+TGG | - | chr3.4:77387094-77387113 | MS.gene69768:CDS | 25.0% |
| !!! | ATAATAAAAAGTATTGGTCC+TGG | + | chr3.4:77385594-77385613 | None:intergenic | 25.0% |
| !!! | CATTTTAGTGTTTTCAAAAC+CGG | - | chr3.4:77386621-77386640 | MS.gene69768:CDS | 25.0% |
| !!! | GAATTTGCTCTTTGAAATTT+GGG | - | chr3.4:77387095-77387114 | MS.gene69768:CDS | 25.0% |
| !!! | GATTGTTTTGTATTTCTCTT+CGG | - | chr3.4:77386338-77386357 | MS.gene69768:intron | 25.0% |
| !!! | TTCATTGTTTTTAACATGAG+TGG | - | chr3.4:77387293-77387312 | MS.gene69768:intron | 25.0% |
| AATAGAATATATGCGCAAAC+AGG | + | chr3.4:77387544-77387563 | None:intergenic | 30.0% | |
| AGTAGAAGAGTTTAATGAAC+AGG | + | chr3.4:77387354-77387373 | None:intergenic | 30.0% | |
| AGTGGATAATGATCTTACTA+TGG | + | chr3.4:77387567-77387586 | None:intergenic | 30.0% | |
| ATAATAAGCCTTCAACTTCA+AGG | - | chr3.4:77384303-77384322 | MS.gene69768:intron | 30.0% | |
| ATAATATACTCTACAGGATC+TGG | - | chr3.4:77386508-77386527 | MS.gene69768:CDS | 30.0% | |
| ATATCAGATGGGAAACAAAT+AGG | - | chr3.4:77387733-77387752 | MS.gene69768:intron | 30.0% | |
| ATCTTCAAATAAGCTTGTCA+TGG | + | chr3.4:77384985-77385004 | None:intergenic | 30.0% | |
| ATTTGTAGAGATGAAAGACT+AGG | + | chr3.4:77384047-77384066 | None:intergenic | 30.0% | |
| CAACGATTGTCAAATTGTAT+CGG | - | chr3.4:77387175-77387194 | MS.gene69768:intron | 30.0% | |
| CCTAATGGAATATATCAGAT+GGG | - | chr3.4:77387722-77387741 | MS.gene69768:intron | 30.0% | |
| CTAGGTAATTATCATGTCTA+TGG | + | chr3.4:77387389-77387408 | None:intergenic | 30.0% | |
| GTAAAGTGGTTTAGTATCAA+AGG | - | chr3.4:77385282-77385301 | MS.gene69768:intron | 30.0% | |
| TAAGGGAACTAAAGTTACTT+TGG | + | chr3.4:77386908-77386927 | None:intergenic | 30.0% | |
| TATAATTAGAGAAGGCAGTT+GGG | + | chr3.4:77386491-77386510 | None:intergenic | 30.0% | |
| TCCTAATGGAATATATCAGA+TGG | - | chr3.4:77387721-77387740 | MS.gene69768:intron | 30.0% | |
| TCTAATATGTAAGTTTGACG+AGG | + | chr3.4:77385491-77385510 | None:intergenic | 30.0% | |
| TTATAATTAGAGAAGGCAGT+TGG | + | chr3.4:77386492-77386511 | None:intergenic | 30.0% | |
| TTATATCATCTTCTACCCTA+TGG | + | chr3.4:77383536-77383555 | None:intergenic | 30.0% | |
| TTATGCTGTTCTCATAGTAA+TGG | - | chr3.4:77384464-77384483 | MS.gene69768:intron | 30.0% | |
| TTCAAAGAAAGAAGCAAAAG+GGG | + | chr3.4:77383437-77383456 | None:intergenic | 30.0% | |
| TTCGCTTTGCTTTGATTATA+AGG | - | chr3.4:77385615-77385634 | MS.gene69768:intron | 30.0% | |
| TTGAAGCAATGATAGATGAA+AGG | + | chr3.4:77386846-77386865 | None:intergenic | 30.0% | |
| TTTCAACATTCACTGGATTT+GGG | - | chr3.4:77387676-77387695 | MS.gene69768:intron | 30.0% | |
| ! | ACTACCATTCAACGATTTTA+GGG | + | chr3.4:77387032-77387051 | None:intergenic | 30.0% |
| ! | ATCTAGAACATTTAAGTTCC+AGG | - | chr3.4:77385573-77385592 | MS.gene69768:intron | 30.0% |
| ! | CTTTCTGTGATAGTTTTTCT+AGG | - | chr3.4:77386018-77386037 | MS.gene69768:CDS | 30.0% |
| ! | TACAATAATCACTTGTTAGC+TGG | - | chr3.4:77387417-77387436 | MS.gene69768:intron | 30.0% |
| ! | TACTACCATTCAACGATTTT+AGG | + | chr3.4:77387033-77387052 | None:intergenic | 30.0% |
| ! | TCATAAAACATGATGGAAAG+TGG | + | chr3.4:77387585-77387604 | None:intergenic | 30.0% |
| ! | TGAAATTTGGGATTTACCAA+TGG | - | chr3.4:77387107-77387126 | MS.gene69768:CDS | 30.0% |
| ! | TTTTAGACATGTGCTAGAAA+TGG | - | chr3.4:77383981-77384000 | MS.gene69768:intron | 30.0% |
| !! | TTCCATTCTAAAATCGAACT+CGG | - | chr3.4:77383758-77383777 | MS.gene69768:intron | 30.0% |
| !!! | GAAATTTTCAAGAGTGTTAC+TGG | + | chr3.4:77385351-77385370 | None:intergenic | 30.0% |
| AAGCATGACAAGAACATTGT+AGG | + | chr3.4:77385520-77385539 | None:intergenic | 35.0% | |
| AAGTGCAAATGTAATTGCGA+TGG | + | chr3.4:77385030-77385049 | None:intergenic | 35.0% | |
| ACATAATTATGCGATGTTGG+AGG | + | chr3.4:77386074-77386093 | None:intergenic | 35.0% | |
| ACTTAACTCATAGCCAAACT+TGG | + | chr3.4:77383719-77383738 | None:intergenic | 35.0% | |
| AGAGAAATCGCTCAAAGATA+TGG | - | chr3.4:77385728-77385747 | MS.gene69768:intron | 35.0% | |
| AGAGAAGAATCTGACATCAT+TGG | + | chr3.4:77383386-77383405 | None:intergenic | 35.0% | |
| AGAGAGCAGTAACTAATTAC+AGG | - | chr3.4:77385415-77385434 | MS.gene69768:intron | 35.0% | |
| AGTGATTCAATGCAAGAGAT+TGG | - | chr3.4:77384716-77384735 | MS.gene69768:intron | 35.0% | |
| AGTGCAAATGTAATTGCGAT+GGG | + | chr3.4:77385029-77385048 | None:intergenic | 35.0% | |
| ATAATTAGAGAAGGCAGTTG+GGG | + | chr3.4:77386490-77386509 | None:intergenic | 35.0% | |
| ATCGTTGTAAAGTGAAATGC+AGG | + | chr3.4:77387162-77387181 | None:intergenic | 35.0% | |
| ATCTATCATTGCTTCAACCA+TGG | - | chr3.4:77386849-77386868 | MS.gene69768:CDS | 35.0% | |
| ATCTGTATGTAAATGGCTGT+TGG | - | chr3.4:77385790-77385809 | MS.gene69768:CDS | 35.0% | |
| ATCTTGTAATTTGGACCACA+AGG | + | chr3.4:77385552-77385571 | None:intergenic | 35.0% | |
| ATTCACTGAACGAGTCAAAA+AGG | - | chr3.4:77385764-77385783 | MS.gene69768:intron | 35.0% | |
| CAATATTCATATGGGGTTCA+TGG | + | chr3.4:77386973-77386992 | None:intergenic | 35.0% | |
| CATCTCTACAAATACCAACA+AGG | - | chr3.4:77384054-77384073 | MS.gene69768:intron | 35.0% | |
| CCAATTCTTGCTAAATCCAT+TGG | + | chr3.4:77387126-77387145 | None:intergenic | 35.0% | |
| CCCATCTGATATATTCCATT+AGG | + | chr3.4:77387725-77387744 | None:intergenic | 35.0% | |
| CTTAACTCATAGCCAAACTT+GGG | + | chr3.4:77383718-77383737 | None:intergenic | 35.0% | |
| CTTAACTCCAAACCAAACTT+AGG | + | chr3.4:77383668-77383687 | None:intergenic | 35.0% | |
| CTTCAATGACTGAAACCAAA+CGG | + | chr3.4:77385128-77385147 | None:intergenic | 35.0% | |
| CTTTCAACATTCACTGGATT+TGG | - | chr3.4:77387675-77387694 | MS.gene69768:intron | 35.0% | |
| CTTTGCTTTGATTATAAGGC+TGG | - | chr3.4:77385619-77385638 | MS.gene69768:intron | 35.0% | |
| GAATTAGCAATTGGAGTAAC+CGG | + | chr3.4:77384386-77384405 | None:intergenic | 35.0% | |
| GTTACTCCAATTGCTAATTC+AGG | - | chr3.4:77384386-77384405 | MS.gene69768:CDS | 35.0% | |
| GTTCATGGCCAAAAACTAAT+CGG | + | chr3.4:77386958-77386977 | None:intergenic | 35.0% | |
| GTTCTTCTTTCAACATTCAC+TGG | - | chr3.4:77387669-77387688 | MS.gene69768:intron | 35.0% | |
| GTTGAAGGCTTATTATCCAA+AGG | + | chr3.4:77384299-77384318 | None:intergenic | 35.0% | |
| TACTTTCTGATAGGAGCTTT+AGG | - | chr3.4:77384201-77384220 | MS.gene69768:intron | 35.0% | |
| TCCAACATCGCATAATTATG+TGG | - | chr3.4:77386073-77386092 | MS.gene69768:intron | 35.0% | |
| TCCACATAATTATGCGATGT+TGG | + | chr3.4:77386077-77386096 | None:intergenic | 35.0% | |
| TCGTAATCCTAAGTTTGGTT+TGG | - | chr3.4:77383658-77383677 | MS.gene69768:CDS | 35.0% | |
| TCTATCATTGCTTCAACCAT+GGG | - | chr3.4:77386850-77386869 | MS.gene69768:CDS | 35.0% | |
| TCTGTATGTAAATGGCTGTT+GGG | - | chr3.4:77385791-77385810 | MS.gene69768:CDS | 35.0% | |
| TGTTAATTTCACAGTCCAGA+AGG | - | chr3.4:77384021-77384040 | MS.gene69768:intron | 35.0% | |
| TGTTGCAGGTCTTAAATTAG+CGG | + | chr3.4:77384624-77384643 | None:intergenic | 35.0% | |
| TTATACAACTAGTGACCCAT+TGG | + | chr3.4:77386689-77386708 | None:intergenic | 35.0% | |
| TTCTTCTCTTCTTCATCATC+AGG | - | chr3.4:77383397-77383416 | MS.gene69768:CDS | 35.0% | |
| TTCTTGTCATGCTTACTTGT+TGG | - | chr3.4:77385526-77385545 | MS.gene69768:intron | 35.0% | |
| TTGAGCGATTTCTCTTCATT+AGG | + | chr3.4:77385723-77385742 | None:intergenic | 35.0% | |
| TTTCATAGAGGACTTGACTT+TGG | + | chr3.4:77384177-77384196 | None:intergenic | 35.0% | |
| ! | AAAGTTACTTTGGCATGCTA+AGG | + | chr3.4:77386898-77386917 | None:intergenic | 35.0% |
| ! | AAGTTACTTTGGCATGCTAA+GGG | + | chr3.4:77386897-77386916 | None:intergenic | 35.0% |
| ! | AGCAGTTTGTAGGATTTGTT+TGG | - | chr3.4:77385176-77385195 | MS.gene69768:intron | 35.0% |
| ! | AGTTTGTAGGATTTGTTTGG+TGG | - | chr3.4:77385179-77385198 | MS.gene69768:intron | 35.0% |
| ! | ATCATCAGATAATGGTCCTT+TGG | - | chr3.4:77384280-77384299 | MS.gene69768:intron | 35.0% |
| ! | CCAATGGATTTAGCAAGAAT+TGG | - | chr3.4:77387123-77387142 | MS.gene69768:CDS | 35.0% |
| ! | CTACCATTCAACGATTTTAG+GGG | + | chr3.4:77387031-77387050 | None:intergenic | 35.0% |
| ! | TAATGAGTTGGACCGAAATA+TGG | + | chr3.4:77385977-77385996 | None:intergenic | 35.0% |
| ! | TAGATCAAATGGGTTTCCAT+TGG | - | chr3.4:77383504-77383523 | MS.gene69768:CDS | 35.0% |
| !! | AACCGAGTTCGATTTTAGAA+TGG | + | chr3.4:77383763-77383782 | None:intergenic | 35.0% |
| !! | TCAAAGATTTCTAGTGTACC+AGG | - | chr3.4:77386759-77386778 | MS.gene69768:CDS | 35.0% |
| !! | TTCCATTGGTTTGAACCATA+GGG | - | chr3.4:77383518-77383537 | MS.gene69768:CDS | 35.0% |
| !! | TTCTTCTTCTGGAATATCCT+CGG | + | chr3.4:77385157-77385176 | None:intergenic | 35.0% |
| !! | TTTCCATTGGTTTGAACCAT+AGG | - | chr3.4:77383517-77383536 | MS.gene69768:CDS | 35.0% |
| !!! | GACTACATTTTTTTCCCACA+TGG | + | chr3.4:77386409-77386428 | None:intergenic | 35.0% |
| !!! | TTTTTGGGCCGATTAGTTTT+TGG | - | chr3.4:77386947-77386966 | MS.gene69768:CDS | 35.0% |
| AAATGTGTGTCTATGCATGC+GGG | - | chr3.4:77385848-77385867 | MS.gene69768:CDS | 40.0% | |
| ACAACTTACTAGGCAATCAC+TGG | - | chr3.4:77386121-77386140 | MS.gene69768:intron | 40.0% | |
| AGACCTAAAATGCAGGAGAA+AGG | + | chr3.4:77386823-77386842 | None:intergenic | 40.0% | |
| AGTGACTCAGTACTTTGACT+GGG | + | chr3.4:77386659-77386678 | None:intergenic | 40.0% | |
| AGTGAGCAGGAGTTACATAT+GGG | - | chr3.4:77387487-77387506 | MS.gene69768:intron | 40.0% | |
| AGTGTACCAGGTTTCAGATT+TGG | - | chr3.4:77386771-77386790 | MS.gene69768:CDS | 40.0% | |
| ATGCTAACCAAGACAAGTAC+TGG | + | chr3.4:77386543-77386562 | None:intergenic | 40.0% | |
| CAAAGATATGGACGAAAACC+TGG | - | chr3.4:77385740-77385759 | MS.gene69768:intron | 40.0% | |
| CAGAAGAAGAAGCAGTTTGT+AGG | - | chr3.4:77385166-77385185 | MS.gene69768:intron | 40.0% | |
| CAGCATGAATTCTCTCCTAA+TGG | - | chr3.4:77387707-77387726 | MS.gene69768:intron | 40.0% | |
| CTACAAACTGCTTCTTCTTC+TGG | + | chr3.4:77385168-77385187 | None:intergenic | 40.0% | |
| CTTGTAGCTTAATGTGAGTG+CGG | - | chr3.4:77387638-77387657 | MS.gene69768:intron | 40.0% | |
| GAAATGTGTGTCTATGCATG+CGG | - | chr3.4:77385847-77385866 | MS.gene69768:CDS | 40.0% | |
| GAATGAGACCTTGAAGTTGA+AGG | + | chr3.4:77384314-77384333 | None:intergenic | 40.0% | |
| GACACTCGTAATCCTAAGTT+TGG | - | chr3.4:77383653-77383672 | MS.gene69768:CDS | 40.0% | |
| GACTTGACTTTGGTAGAATG+TGG | + | chr3.4:77384167-77384186 | None:intergenic | 40.0% | |
| GGAGTTAAGTAAAGTCTGAC+TGG | - | chr3.4:77383679-77383698 | MS.gene69768:CDS | 40.0% | |
| GTACATGGAAGACATGTAGA+GGG | - | chr3.4:77384419-77384438 | MS.gene69768:intron | 40.0% | |
| GTGTACCAGGTTTCAGATTT+GGG | - | chr3.4:77386772-77386791 | MS.gene69768:CDS | 40.0% | |
| GTTAATCCTCTCAGAAGAAG+AGG | - | chr3.4:77383631-77383650 | MS.gene69768:intron | 40.0% | |
| TAAGACCTGCAACAGATTCT+AGG | - | chr3.4:77384630-77384649 | MS.gene69768:CDS | 40.0% | |
| TAATGTAGGACCATCTGTCT+TGG | + | chr3.4:77384108-77384127 | None:intergenic | 40.0% | |
| TAATTAGAGAAGGCAGTTGG+GGG | + | chr3.4:77386489-77386508 | None:intergenic | 40.0% | |
| TACCCTATGGTTCAAACCAA+TGG | + | chr3.4:77383523-77383542 | None:intergenic | 40.0% | |
| TCATCTTCTACCAAGACAGA+TGG | - | chr3.4:77384095-77384114 | MS.gene69768:intron | 40.0% | |
| TCTCTTGCATTGAATCACTG+CGG | + | chr3.4:77384715-77384734 | None:intergenic | 40.0% | |
| TCTGCACCTGAATTAGCAAT+TGG | + | chr3.4:77384395-77384414 | None:intergenic | 40.0% | |
| TGAAAGAGAACATGCCATGT+GGG | - | chr3.4:77386392-77386411 | MS.gene69768:intron | 40.0% | |
| TGAAAGGAGACCTAAAATGC+AGG | + | chr3.4:77386830-77386849 | None:intergenic | 40.0% | |
| TGTACATGGAAGACATGTAG+AGG | - | chr3.4:77384418-77384437 | MS.gene69768:intron | 40.0% | |
| TTGAAAGAGAACATGCCATG+TGG | - | chr3.4:77386391-77386410 | MS.gene69768:intron | 40.0% | |
| ! | AGAGTGTTACTGGAAGATTC+CGG | + | chr3.4:77385341-77385360 | None:intergenic | 40.0% |
| ! | ATAAGGCTGGTTGTAGTCTA+GGG | - | chr3.4:77385632-77385651 | MS.gene69768:intron | 40.0% |
| ! | GACTCGATCATTTTCAGTTC+CGG | - | chr3.4:77384586-77384605 | MS.gene69768:intron | 40.0% |
| ! | GCTTGCATACTTTTGCTTTC+TGG | - | chr3.4:77386563-77386582 | MS.gene69768:CDS | 40.0% |
| ! | TAATGTGAGTGCGGTTTTCT+CGG | - | chr3.4:77387647-77387666 | MS.gene69768:intron | 40.0% |
| ! | TAGTGTTTTCAAAACCGGAC+CGG | - | chr3.4:77386626-77386645 | MS.gene69768:intron | 40.0% |
| ! | TATAAGGCTGGTTGTAGTCT+AGG | - | chr3.4:77385631-77385650 | MS.gene69768:intron | 40.0% |
| ! | TGCATACTTTTGCTTTCTGG+AGG | - | chr3.4:77386566-77386585 | MS.gene69768:CDS | 40.0% |
| ! | TTAGCGGCTTTGACATTAAC+CGG | + | chr3.4:77384608-77384627 | None:intergenic | 40.0% |
| ! | TTGCCTTTCTCCTGCATTTT+AGG | - | chr3.4:77386817-77386836 | MS.gene69768:CDS | 40.0% |
| !! | CACATTCATTGGTGTCATGT+CGG | + | chr3.4:77387204-77387223 | None:intergenic | 40.0% |
| !! | GAACCTGGACTTGATAATGT+AGG | + | chr3.4:77384122-77384141 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTTGGCAGTGAGC+AGG | - | chr3.4:77387474-77387493 | MS.gene69768:intron | 40.0% |
| AACGTATGCCGAACAACAGT+CGG | + | chr3.4:77385381-77385400 | None:intergenic | 45.0% | |
| AATTAGAGAAGGCAGTTGGG+GGG | + | chr3.4:77386488-77386507 | None:intergenic | 45.0% | |
| ACAGGATGACAAATGCGAAC+TGG | + | chr3.4:77387526-77387545 | None:intergenic | 45.0% | |
| ACCAAGACTGTGCAGTAAAG+TGG | - | chr3.4:77385268-77385287 | MS.gene69768:intron | 45.0% | |
| ACCACTTTACTGCACAGTCT+TGG | + | chr3.4:77385272-77385291 | None:intergenic | 45.0% | |
| ACTTTGGTAGAATGTGGCCT+TGG | + | chr3.4:77384161-77384180 | None:intergenic | 45.0% | |
| AGATGAAAGACTAGGCCTTC+TGG | + | chr3.4:77384039-77384058 | None:intergenic | 45.0% | |
| AGTCATTGAAGATGCTTCCG+AGG | - | chr3.4:77385137-77385156 | MS.gene69768:intron | 45.0% | |
| CACTCTCGTAATCCCAAGTT+TGG | - | chr3.4:77383703-77383722 | MS.gene69768:intron | 45.0% | |
| CAGTGACTCAGTACTTTGAC+TGG | + | chr3.4:77386660-77386679 | None:intergenic | 45.0% | |
| CAGTGAGCAGGAGTTACATA+TGG | - | chr3.4:77387486-77387505 | MS.gene69768:intron | 45.0% | |
| CTCTTGCATTGAATCACTGC+GGG | + | chr3.4:77384714-77384733 | None:intergenic | 45.0% | |
| GAAACACCATCAGTAGTTGC+TGG | + | chr3.4:77384689-77384708 | None:intergenic | 45.0% | |
| GAAGAAAGCGAGTTTACCCA+TGG | + | chr3.4:77386869-77386888 | None:intergenic | 45.0% | |
| GACAACCACATCAACTGCAA+AGG | - | chr3.4:77387814-77387833 | MS.gene69768:CDS | 45.0% | |
| GAGCCCCTAAAATCGTTGAA+TGG | - | chr3.4:77387025-77387044 | MS.gene69768:CDS | 45.0% | |
| GAGTCACTGGTCAAACCAAT+GGG | - | chr3.4:77386671-77386690 | MS.gene69768:intron | 45.0% | |
| GCAGGAGAAAGGCAATGAAA+TGG | + | chr3.4:77386812-77386831 | None:intergenic | 45.0% | |
| GGATGTACCAGTACTTGTCT+TGG | - | chr3.4:77386533-77386552 | MS.gene69768:CDS | 45.0% | |
| GGTCCTACATTATCAAGTCC+AGG | - | chr3.4:77384116-77384135 | MS.gene69768:intron | 45.0% | |
| GTTCCCTTCATCGAGTAAAG+CGG | - | chr3.4:77384349-77384368 | MS.gene69768:CDS | 45.0% | |
| TATACTCTACAGGATCTGGC+AGG | - | chr3.4:77386512-77386531 | MS.gene69768:CDS | 45.0% | |
| TCAGGTGCAGAGAATGTACA+TGG | - | chr3.4:77384404-77384423 | MS.gene69768:CDS | 45.0% | |
| TGACTCGTTCAGTGAATACC+AGG | + | chr3.4:77385761-77385780 | None:intergenic | 45.0% | |
| TGAGTCACTGGTCAAACCAA+TGG | - | chr3.4:77386670-77386689 | MS.gene69768:intron | 45.0% | |
| ! | GATTTGTTTGGTGGAGCTTG+CGG | - | chr3.4:77385188-77385207 | MS.gene69768:intron | 45.0% |
| ! | GCACTTTCTAGTGTCCTTGT+TGG | + | chr3.4:77384071-77384090 | None:intergenic | 45.0% |
| ! | GGTTGTAGTCTAGGGTCATT+AGG | - | chr3.4:77385640-77385659 | MS.gene69768:intron | 45.0% |
| ! | TGCATCCTTTGCAGTTGATG+TGG | + | chr3.4:77387822-77387841 | None:intergenic | 45.0% |
| ! | TTGCATTTTGTCACGCCGTT+TGG | - | chr3.4:77385110-77385129 | MS.gene69768:intron | 45.0% |
| ! | TTGCTTTCTGGAGGAACTAC+TGG | - | chr3.4:77386575-77386594 | MS.gene69768:CDS | 45.0% |
| !! | ATGCTTACTTGTTGGCCTTG+TGG | - | chr3.4:77385534-77385553 | MS.gene69768:intron | 45.0% |
| !! | CAGTCAAAGTACTGAGTCAC+TGG | - | chr3.4:77386658-77386677 | MS.gene69768:intron | 45.0% |
| !! | TCAACGATTTTAGGGGCTCA+AGG | + | chr3.4:77387024-77387043 | None:intergenic | 45.0% |
| !! | AAAATGAAAAAATATAATTA+AGG | + | chr3.4:77386926-77386945 | None:intergenic | 5.0% |
| !! | AAATGAAAAAATATAATTAA+GGG | + | chr3.4:77386925-77386944 | None:intergenic | 5.0% |
| !!! | ATTAATTTTTTATCATAAAA+AGG | + | chr3.4:77384811-77384830 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTACT+AGG | - | chr3.4:77386146-77386165 | MS.gene69768:intron | 5.0% |
| ACTTTGACTGGGTCGATGAC+CGG | + | chr3.4:77386648-77386667 | None:intergenic | 50.0% | |
| AGACGCCTAGAATCTGTTGC+AGG | + | chr3.4:77384638-77384657 | None:intergenic | 50.0% | |
| AGGGGGAGATACTCTTAGGA+TGG | - | chr3.4:77385212-77385231 | MS.gene69768:intron | 50.0% | |
| ATGTCTGCAAGCAGGATGTC+CGG | - | chr3.4:77385319-77385338 | MS.gene69768:intron | 50.0% | |
| ATTAGAGAAGGCAGTTGGGG+GGG | + | chr3.4:77386487-77386506 | None:intergenic | 50.0% | |
| CATGGAAGACATGTAGAGGG+TGG | - | chr3.4:77384422-77384441 | MS.gene69768:intron | 50.0% | |
| CTAGTCCTCCGACTGTTGTT+CGG | - | chr3.4:77385370-77385389 | MS.gene69768:intron | 50.0% | |
| GACATGTGATGTCTGCAAGC+AGG | - | chr3.4:77385311-77385330 | MS.gene69768:intron | 50.0% | |
| GAGTGTCCTCTTCTTCTGAG+AGG | + | chr3.4:77383640-77383659 | None:intergenic | 50.0% | |
| TAAAGCGGCGCATTCGTTAC+CGG | - | chr3.4:77384364-77384383 | MS.gene69768:CDS | 50.0% | |
| TATGCATGCGGGACCAGAAA+AGG | - | chr3.4:77385859-77385878 | MS.gene69768:CDS | 50.0% | |
| TCAAGTCCAGGTTCCACTAG+AGG | - | chr3.4:77384128-77384147 | MS.gene69768:intron | 50.0% | |
| TGCAACAGATTCTAGGCGTC+TGG | - | chr3.4:77384637-77384656 | MS.gene69768:CDS | 50.0% | |
| ! | AAGCCTTTTCCCACTGAGTG+GGG | - | chr3.4:77385907-77385926 | MS.gene69768:CDS | 50.0% |
| ! | AATGAAATGGCGAGAGCACG+TGG | + | chr3.4:77386799-77386818 | None:intergenic | 50.0% |
| ! | ATGAAATGGCGAGAGCACGT+GGG | + | chr3.4:77386798-77386817 | None:intergenic | 50.0% |
| ! | CAAGCCTTTTCCCACTGAGT+GGG | - | chr3.4:77385906-77385925 | MS.gene69768:CDS | 50.0% |
| ! | TTGGTAGAATGTGGCCTTGG+TGG | + | chr3.4:77384158-77384177 | None:intergenic | 50.0% |
| !! | AGGATGGACTGCAGTTGCAA+AGG | - | chr3.4:77385228-77385247 | MS.gene69768:intron | 50.0% |
| CCACAGCCAGCAACTACTGA+TGG | - | chr3.4:77384680-77384699 | MS.gene69768:intron | 55.0% | |
| CCACTCAGTGGGAAAAGGCT+TGG | + | chr3.4:77385908-77385927 | None:intergenic | 55.0% | |
| CGGAAGGGGGAGATACTCTT+AGG | - | chr3.4:77385208-77385227 | MS.gene69768:intron | 55.0% | |
| GTATGCCGAACAACAGTCGG+AGG | + | chr3.4:77385378-77385397 | None:intergenic | 55.0% | |
| TTAGAGAAGGCAGTTGGGGG+GGG | + | chr3.4:77386486-77386505 | None:intergenic | 55.0% | |
| TTCCTCTGCCTCTAGTGCTC+TGG | - | chr3.4:77386044-77386063 | MS.gene69768:CDS | 55.0% | |
| TTTGGTGGAGCTTGCGGAAG+GGG | - | chr3.4:77385194-77385213 | MS.gene69768:intron | 55.0% | |
| ! | CCAAGCCTTTTCCCACTGAG+TGG | - | chr3.4:77385905-77385924 | MS.gene69768:CDS | 55.0% |
| ! | CCATCAGTAGTTGCTGGCTG+TGG | + | chr3.4:77384683-77384702 | None:intergenic | 55.0% |
| ! | CTTTTCCCACTGAGTGGGGT+CGG | - | chr3.4:77385911-77385930 | MS.gene69768:CDS | 55.0% |
| ! | GAGGATAGCCAGAGCACTAG+AGG | + | chr3.4:77386055-77386074 | None:intergenic | 55.0% |
| ! | GCGCCGCTTTACTCGATGAA+GGG | + | chr3.4:77384355-77384374 | None:intergenic | 55.0% |
| ! | GTGGGCCCAAATCTGAAACC+TGG | + | chr3.4:77386780-77386799 | None:intergenic | 55.0% |
| ! | GTTTGGTGGAGCTTGCGGAA+GGG | - | chr3.4:77385193-77385212 | MS.gene69768:intron | 55.0% |
| ! | TGCGCCGCTTTACTCGATGA+AGG | + | chr3.4:77384356-77384375 | None:intergenic | 55.0% |
| ! | TGTTTGGTGGAGCTTGCGGA+AGG | - | chr3.4:77385192-77385211 | MS.gene69768:intron | 55.0% |
| ACTGAGTGGGGTCGGCTACA+TGG | - | chr3.4:77385919-77385938 | MS.gene69768:CDS | 60.0% | |
| ATGTAGCCGACCCCACTCAG+TGG | + | chr3.4:77385920-77385939 | None:intergenic | 60.0% | |
| CCACTAGAGGACTGCCACCA+AGG | - | chr3.4:77384141-77384160 | MS.gene69768:intron | 60.0% | |
| CGACCCCACTCAGTGGGAAA+AGG | + | chr3.4:77385913-77385932 | None:intergenic | 60.0% | |
| GGCAGTCCTCTAGTGGAACC+TGG | + | chr3.4:77384137-77384156 | None:intergenic | 60.0% | |
| TAGAGAAGGCAGTTGGGGGG+GGG | + | chr3.4:77386485-77386504 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTCAGT+GGG | + | chr3.4:77385919-77385938 | None:intergenic | 60.0% | |
| TTGGTGGAGCTTGCGGAAGG+GGG | - | chr3.4:77385195-77385214 | MS.gene69768:intron | 60.0% | |
| ! | AGCCAGAGCACTAGAGGCAG+AGG | + | chr3.4:77386049-77386068 | None:intergenic | 60.0% |
| ! | CCTTGGTGGCAGTCCTCTAG+TGG | + | chr3.4:77384144-77384163 | None:intergenic | 60.0% |
| AGAGAAGGCAGTTGGGGGGG+GGG | + | chr3.4:77386484-77386503 | None:intergenic | 65.0% | |
| GACTGGGTCGATGACCGGTC+CGG | + | chr3.4:77386643-77386662 | None:intergenic | 65.0% | |
| AGAAGGCAGTTGGGGGGGGG+GGG | + | chr3.4:77386482-77386501 | None:intergenic | 70.0% | |
| GAGAAGGCAGTTGGGGGGGG+GGG | + | chr3.4:77386483-77386502 | None:intergenic | 70.0% | |
| AAGGCAGTTGGGGGGGGGGG+GGG | + | chr3.4:77386480-77386499 | None:intergenic | 75.0% | |
| GAAGGCAGTTGGGGGGGGGG+GGG | + | chr3.4:77386481-77386500 | None:intergenic | 75.0% | |
| ! | AGGCAGTTGGGGGGGGGGGG+GGG | + | chr3.4:77386479-77386498 | None:intergenic | 80.0% |
| ! | AGTTGGGGGGGGGGGGGGGG+GGG | + | chr3.4:77386475-77386494 | None:intergenic | 85.0% |
| ! | CAGTTGGGGGGGGGGGGGGG+GGG | + | chr3.4:77386476-77386495 | None:intergenic | 85.0% |
| ! | GCAGTTGGGGGGGGGGGGGG+GGG | + | chr3.4:77386477-77386496 | None:intergenic | 85.0% |
| ! | GGCAGTTGGGGGGGGGGGGG+GGG | + | chr3.4:77386478-77386497 | None:intergenic | 85.0% |
| ! | GTTGGGGGGGGGGGGGGGGG+GGG | + | chr3.4:77386474-77386493 | None:intergenic | 90.0% |
| ! | TTGGGGGGGGGGGGGGGGGG+GGG | + | chr3.4:77386473-77386492 | None:intergenic | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 77383344 | 77387860 | 77383344 | ID=MS.gene69768 |
| chr3.4 | mRNA | 77383344 | 77387860 | 77383344 | ID=MS.gene69768.t1;Parent=MS.gene69768 |
| chr3.4 | exon | 77387786 | 77387860 | 77387786 | ID=MS.gene69768.t1.exon1;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77387786 | 77387860 | 77387786 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77386747 | 77387169 | 77386747 | ID=MS.gene69768.t1.exon2;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77386747 | 77387169 | 77386747 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77386467 | 77386641 | 77386467 | ID=MS.gene69768.t1.exon3;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77386467 | 77386641 | 77386467 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77385768 | 77386065 | 77385768 | ID=MS.gene69768.t1.exon4;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77385768 | 77386065 | 77385768 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77384608 | 77384680 | 77384608 | ID=MS.gene69768.t1.exon5;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77384608 | 77384680 | 77384608 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77384333 | 77384423 | 77384333 | ID=MS.gene69768.t1.exon6;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77384333 | 77384423 | 77384333 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77383636 | 77383715 | 77383636 | ID=MS.gene69768.t1.exon7;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77383636 | 77383715 | 77383636 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| chr3.4 | exon | 77383344 | 77383559 | 77383344 | ID=MS.gene69768.t1.exon8;Parent=MS.gene69768.t1 |
| chr3.4 | CDS | 77383344 | 77383559 | 77383344 | ID=cds.MS.gene69768.t1;Parent=MS.gene69768.t1 |
| Gene Sequence |
| Protein sequence |
