Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060929.t1 | XP_013465813.1 | 98.9 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 8.00E-214 | 752.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060929.t1 | Q8W4E6 | 81.4 | 366 | 62 | 3 | 1 | 360 | 1 | 366 | 6.1e-178 | 624.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060929.t1 | A0A072VCX6 | 98.9 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 5.8e-214 | 752.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049259 | MS.gene060929 | 0.800398 | 1.47E-48 | -1.69E-46 |
| MS.gene059865 | MS.gene060929 | -0.802395 | 5.73E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene060982 | -0.800633 | 1.32E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene062294 | -0.801166 | 1.02E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene062704 | 0.816124 | 6.50E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene063045 | 0.829658 | 4.55E-55 | -1.69E-46 |
| MS.gene060929 | MS.gene063125 | 0.804598 | 2.00E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene063145 | 0.801367 | 9.31E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene063965 | -0.818372 | 2.03E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene065502 | -0.800877 | 1.17E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene071172 | 0.830713 | 2.52E-55 | -1.69E-46 |
| MS.gene060929 | MS.gene072875 | -0.801557 | 8.51E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene09162 | 0.818118 | 2.32E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene24298 | 0.819172 | 1.34E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene25062 | 0.805888 | 1.07E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene26941 | 0.821229 | 4.51E-53 | -1.69E-46 |
| MS.gene060929 | MS.gene27333 | 0.832011 | 1.21E-55 | -1.69E-46 |
| MS.gene060929 | MS.gene27893 | -0.806879 | 6.64E-50 | -1.69E-46 |
| MS.gene060929 | MS.gene29927 | -0.800625 | 1.32E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene47049 | 0.810972 | 8.84E-51 | -1.69E-46 |
| MS.gene060929 | MS.gene54709 | -0.824721 | 6.92E-54 | -1.69E-46 |
| MS.gene060929 | MS.gene56598 | -0.800642 | 1.31E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene63367 | 0.808098 | 3.66E-50 | -1.69E-46 |
| MS.gene060929 | MS.gene67656 | -0.80155 | 8.54E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene68181 | 0.800324 | 1.52E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene68200 | 0.807559 | 4.77E-50 | -1.69E-46 |
| MS.gene060929 | MS.gene68793 | 0.800136 | 1.66E-48 | -1.69E-46 |
| MS.gene060929 | MS.gene69768 | 0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene060929 | MS.gene72118 | -0.816292 | 5.96E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene74561 | 0.803116 | 4.06E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene78812 | 0.80543 | 1.34E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene80239 | -0.801405 | 9.14E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene89501 | 0.82355 | 1.30E-53 | -1.69E-46 |
| MS.gene060929 | MS.gene92255 | 0.818524 | 1.87E-52 | -1.69E-46 |
| MS.gene060929 | MS.gene92808 | 0.80211 | 6.55E-49 | -1.69E-46 |
| MS.gene060929 | MS.gene93192 | -0.800552 | 1.37E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060929.t1 | MTR_1g012920 | 98.889 | 360 | 4 | 0 | 1 | 360 | 1 | 360 | 0.0 | 742 |
| MS.gene060929.t1 | MTR_5g089520 | 61.219 | 361 | 125 | 4 | 1 | 360 | 1 | 347 | 1.58e-162 | 459 |
| MS.gene060929.t1 | MTR_8g039290 | 62.842 | 366 | 123 | 5 | 1 | 360 | 1 | 359 | 1.06e-160 | 454 |
| MS.gene060929.t1 | MTR_8g039290 | 62.568 | 366 | 123 | 6 | 1 | 360 | 1 | 358 | 2.96e-158 | 448 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060929.t1 | AT5G25265 | 81.421 | 366 | 62 | 3 | 1 | 360 | 1 | 366 | 0.0 | 602 |
| MS.gene060929.t1 | AT2G25260 | 72.702 | 359 | 91 | 5 | 4 | 360 | 5 | 358 | 0.0 | 530 |
| MS.gene060929.t1 | AT5G13500 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.57e-172 | 484 |
| MS.gene060929.t1 | AT5G13500 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.57e-172 | 484 |
| MS.gene060929.t1 | AT5G13500 | 71.924 | 317 | 85 | 3 | 46 | 360 | 43 | 357 | 2.57e-172 | 484 |
| MS.gene060929.t1 | AT3G01720 | 24.150 | 294 | 186 | 10 | 65 | 341 | 394 | 667 | 1.67e-12 | 69.3 |
Find 87 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAAAGCTTTATCGGTTTC+AGG | 0.147915 | 1.2:-8735298 | None:intergenic |
| TTCATAATTCACTACACTTA+TGG | 0.167165 | 1.2:+8736782 | MS.gene060929:CDS |
| CTAGGTGACTCTAGTGAAAA+TGG | 0.224137 | 1.2:+8737969 | MS.gene060929:intron |
| GTTGCTCAACCTTTGCCTTC+TGG | 0.227974 | 1.2:+8733623 | MS.gene060929:CDS |
| GCCGTTTCGTCTGCTCTTCA+TGG | 0.235074 | 1.2:+8735433 | MS.gene060929:CDS |
| CCTGAAACCGATAAAGCTTT+TGG | 0.263522 | 1.2:+8735298 | MS.gene060929:CDS |
| CACCCATCCAAAAGCTTTAT+CGG | 0.266241 | 1.2:-8735305 | None:intergenic |
| ATGAAACATACCACACTTTC+CGG | 0.272009 | 1.2:-8737028 | None:intergenic |
| ATTGGATCTATATTGGTTAC+AGG | 0.301550 | 1.2:-8734950 | None:intergenic |
| CAAATGCCCATGGTCTATTA+AGG | 0.302361 | 1.2:-8734656 | None:intergenic |
| TTAAGTGGCATCTTGATTAC+TGG | 0.305393 | 1.2:-8733395 | None:intergenic |
| ACACAAGGACTTCATGATTC+AGG | 0.308069 | 1.2:+8735471 | MS.gene060929:CDS |
| ATTTCCAATTGGATCTATAT+TGG | 0.315891 | 1.2:-8734957 | None:intergenic |
| AGTGTAGAGTTATGTATTAT+TGG | 0.315997 | 1.2:+8733492 | MS.gene060929:CDS |
| ATGTTACTGAGAATGTTATT+AGG | 0.323674 | 1.2:-8733283 | None:intergenic |
| AGCACTTTCTCATATTTCTT+AGG | 0.325931 | 1.2:-8734899 | None:intergenic |
| TGGTAAAACTGATCAGTATA+TGG | 0.343547 | 1.2:+8733583 | MS.gene060929:CDS |
| TATTCCGAACTGGTCATCAT+AGG | 0.344222 | 1.2:+8738011 | MS.gene060929:CDS |
| TCATAATTCACTACACTTAT+GGG | 0.346462 | 1.2:+8736783 | MS.gene060929:CDS |
| ATAATAGATCGGTACCTTCA+TGG | 0.360692 | 1.2:-8736816 | None:intergenic |
| GATACCTTGCCAACAATTAC+AGG | 0.376521 | 1.2:-8734983 | None:intergenic |
| CATTCCATCTCTGGCTAAGT+TGG | 0.377427 | 1.2:-8734846 | None:intergenic |
| CTGGTATGGGTGGATTTACT+AGG | 0.390112 | 1.2:+8733549 | MS.gene060929:CDS |
| GAAAGTGGTGATGACAATTC+TGG | 0.391728 | 1.2:+8733530 | MS.gene060929:CDS |
| GGAAATTCACCTGTAATTGT+TGG | 0.394236 | 1.2:+8734974 | MS.gene060929:CDS |
| GTTACAGGTCCGTTCTCCTC+AGG | 0.398056 | 1.2:-8734935 | None:intergenic |
| CTGATTCTGTTTACAATACA+TGG | 0.406387 | 1.2:+8733468 | MS.gene060929:CDS |
| TTTGCCTTCTGGAATGGATC+AGG | 0.414709 | 1.2:+8733634 | MS.gene060929:CDS |
| ATTACAGGTGAATTTCCAAT+TGG | 0.422481 | 1.2:-8734968 | None:intergenic |
| TGCAGCTCCCATTCCATCTC+TGG | 0.432516 | 1.2:-8734855 | None:intergenic |
| TCAACCTTTGCCTTCTGGAA+TGG | 0.434673 | 1.2:+8733628 | MS.gene060929:CDS |
| TCTCTGGCTAAGTTGGGTAT+AGG | 0.438539 | 1.2:-8734839 | None:intergenic |
| ATTGCCACCACCTGGTGTTC+CGG | 0.439856 | 1.2:+8737009 | MS.gene060929:CDS |
| TCGTCTGCTCTTCATGGTGT+TGG | 0.457117 | 1.2:+8735439 | MS.gene060929:CDS |
| ATTCCATCTCTGGCTAAGTT+GGG | 0.459075 | 1.2:-8734845 | None:intergenic |
| AACATGGATGAATGTTTCCT+TGG | 0.468333 | 1.2:+8735261 | MS.gene060929:CDS |
| GTAACCAATATAGATCCAAT+TGG | 0.470446 | 1.2:+8734953 | MS.gene060929:CDS |
| TTAGGCTCGATATAAAAGAA+AGG | 0.471498 | 1.2:-8734881 | None:intergenic |
| CCACCATGGGACAAAGAACT+TGG | 0.473823 | 1.2:+8736752 | MS.gene060929:CDS |
| AATCAGGGTGAACTGACATA+TGG | 0.476030 | 1.2:+8736923 | MS.gene060929:intron |
| AAAGGTTGAGCAACAAAAGT+AGG | 0.477238 | 1.2:-8733614 | None:intergenic |
| TGTTTCCTTGGCAATGAAGA+AGG | 0.478316 | 1.2:+8735273 | MS.gene060929:CDS |
| TTGCCAAGTTCTTTGTCCCA+TGG | 0.483106 | 1.2:-8736755 | None:intergenic |
| GGTTTCACAATGATATGATC+TGG | 0.489542 | 1.2:-8734818 | None:intergenic |
| CAACTTAGCCAGAGATGGAA+TGG | 0.497539 | 1.2:+8734847 | MS.gene060929:CDS |
| TTCACCTGTAATTGTTGGCA+AGG | 0.504988 | 1.2:+8734979 | MS.gene060929:CDS |
| ACATACAACATCATTATCTC+AGG | 0.505441 | 1.2:+8733311 | MS.gene060929:CDS |
| CCGCAGCAAATATTCCGAAC+TGG | 0.517078 | 1.2:+8738001 | MS.gene060929:CDS |
| TGGTGATGACAATTCTGGTA+TGG | 0.520121 | 1.2:+8733535 | MS.gene060929:CDS |
| AACTTAGCCAGAGATGGAAT+GGG | 0.520799 | 1.2:+8734848 | MS.gene060929:CDS |
| TAGGCTCGATATAAAAGAAA+GGG | 0.524947 | 1.2:-8734880 | None:intergenic |
| TTTATTGATGGTTTACGTGA+AGG | 0.530199 | 1.2:-8733365 | None:intergenic |
| CCAGGAAAATCTTGTCTCAA+AGG | 0.533851 | 1.2:-8733341 | None:intergenic |
| ACCATGAAGAGCAGACGAAA+CGG | 0.535360 | 1.2:-8735434 | None:intergenic |
| TAAGTGGCATCTTGATTACT+GGG | 0.536185 | 1.2:-8733394 | None:intergenic |
| AAGCCCTATGATGACCAGTT+CGG | 0.537283 | 1.2:-8738015 | None:intergenic |
| AGGATCCTTCTTCATTGCCA+AGG | 0.541651 | 1.2:-8735278 | None:intergenic |
| ACCACACTTTCCGGAACACC+AGG | 0.542603 | 1.2:-8737019 | None:intergenic |
| TTACAGGTCCGTTCTCCTCA+GGG | 0.544928 | 1.2:-8734934 | None:intergenic |
| TTTAAGAAGATGAAGGAAAG+TGG | 0.546825 | 1.2:+8733515 | MS.gene060929:CDS |
| ATTATGTATGTCAGCCACCA+TGG | 0.547374 | 1.2:+8736738 | MS.gene060929:intron |
| ATTCCGAACTGGTCATCATA+GGG | 0.555677 | 1.2:+8738012 | MS.gene060929:CDS |
| CCAAGTTCTTTGTCCCATGG+TGG | 0.557973 | 1.2:-8736752 | None:intergenic |
| AATCTGACATTGCCACCACC+TGG | 0.559929 | 1.2:+8737001 | MS.gene060929:CDS |
| AAGGAAACATTCATCCATGT+TGG | 0.564015 | 1.2:-8735259 | None:intergenic |
| ACATTGTCCTTAATAGACCA+TGG | 0.570525 | 1.2:+8734649 | MS.gene060929:CDS |
| CATTGTCCTTAATAGACCAT+GGG | 0.571906 | 1.2:+8734650 | MS.gene060929:CDS |
| AAGGTTGAGCAACAAAAGTA+GGG | 0.572523 | 1.2:-8733613 | None:intergenic |
| TTATTGGTTTAAGAAGATGA+AGG | 0.575689 | 1.2:+8733508 | MS.gene060929:CDS |
| ATACCCAACTTAGCCAGAGA+TGG | 0.578267 | 1.2:+8734842 | MS.gene060929:CDS |
| TTATGTATGTCAGCCACCAT+GGG | 0.581129 | 1.2:+8736739 | MS.gene060929:intron |
| GATGGTTTACGTGAAGGACC+AGG | 0.582960 | 1.2:-8733359 | None:intergenic |
| ACCTGGTGTTCCGGAAAGTG+TGG | 0.593682 | 1.2:+8737018 | MS.gene060929:CDS |
| AAGTACTACCCTGAGGAGAA+CGG | 0.599409 | 1.2:+8734926 | MS.gene060929:CDS |
| TTAAGAAAATTGCTCCAACA+TGG | 0.606173 | 1.2:+8735245 | MS.gene060929:CDS |
| GGTGATGACAATTCTGGTAT+GGG | 0.617478 | 1.2:+8733536 | MS.gene060929:CDS |
| GACCATGGGCATTTGTACAG+TGG | 0.619885 | 1.2:+8734664 | MS.gene060929:CDS |
| CTTTCCGGAACACCAGGTGG+TGG | 0.623026 | 1.2:-8737013 | None:intergenic |
| AGAACCTGATCCATTCCAGA+AGG | 0.629291 | 1.2:-8733638 | None:intergenic |
| TGATCCATTCCAGAAGGCAA+AGG | 0.638296 | 1.2:-8733632 | None:intergenic |
| AGCCACTGTACAAATGCCCA+TGG | 0.640117 | 1.2:-8734666 | None:intergenic |
| GATGACAATTCTGGTATGGG+TGG | 0.644898 | 1.2:+8733539 | MS.gene060929:CDS |
| TGGGTGTGACTATTCCATGA+AGG | 0.657511 | 1.2:+8736802 | MS.gene060929:CDS |
| CCAGTTCGGAATATTTGCTG+CGG | 0.659311 | 1.2:-8738001 | None:intergenic |
| TGTTGGTAACATATTACACA+AGG | 0.688104 | 1.2:+8735456 | MS.gene060929:CDS |
| ACACTTTCCGGAACACCAGG+TGG | 0.723361 | 1.2:-8737016 | None:intergenic |
| GCTGAGAAAGTACTACCCTG+AGG | 0.760751 | 1.2:+8734919 | MS.gene060929:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAGAATTTAATAATAGAT+CGG | - | chr1.2:8736830-8736849 | None:intergenic | 10.0% |
| !! | AAAGTTAAAAAAATGTATTG+GGG | + | chr1.2:8737325-8737344 | MS.gene060929:intron | 15.0% |
| !! | ATTCTGATAATTATGATTTA+TGG | + | chr1.2:8735019-8735038 | MS.gene060929:intron | 15.0% |
| !! | GAAAGTTAAAAAAATGTATT+GGG | + | chr1.2:8737324-8737343 | MS.gene060929:intron | 15.0% |
| !! | TGAAAGTTAAAAAAATGTAT+TGG | + | chr1.2:8737323-8737342 | MS.gene060929:intron | 15.0% |
| !! | TTATAATTTAAGTCAAATGA+CGG | + | chr1.2:8735139-8735158 | MS.gene060929:intron | 15.0% |
| !!! | ATGATTTGTTTATAAACAAT+CGG | - | chr1.2:8737821-8737840 | None:intergenic | 15.0% |
| !!! | TTAAATTCATTTTCTATTCT+AGG | + | chr1.2:8734730-8734749 | MS.gene060929:intron | 15.0% |
| !!! | TTATGTCTAATTTTACAATT+TGG | + | chr1.2:8737936-8737955 | MS.gene060929:intron | 15.0% |
| !!! | TTTAATTTTGCAAAAATGAT+AGG | + | chr1.2:8735216-8735235 | MS.gene060929:intron | 15.0% |
| !!! | TTTGAAAGTTCATTAATTTT+GGG | + | chr1.2:8734528-8734547 | MS.gene060929:intron | 15.0% |
| !!! | TTTTGAAAGTTCATTAATTT+TGG | + | chr1.2:8734527-8734546 | MS.gene060929:intron | 15.0% |
| !! | AAACAAATCTAACACTTTAA+AGG | + | chr1.2:8735962-8735981 | MS.gene060929:intron | 20.0% |
| !! | CCAAAAAAAATTACAAACTA+CGG | - | chr1.2:8734191-8734210 | None:intergenic | 20.0% |
| !! | GCAATGAAGAATTATATTTA+AGG | + | chr1.2:8735630-8735649 | MS.gene060929:intron | 20.0% |
| !! | TATTAATGTATGTTCCTTTA+TGG | + | chr1.2:8734619-8734638 | MS.gene060929:intron | 20.0% |
| !! | TCATAGAAAAGTTAAAAGAA+AGG | + | chr1.2:8736211-8736230 | MS.gene060929:intron | 20.0% |
| !! | TTTAAATTGAGAAATGTTAG+TGG | + | chr1.2:8733976-8733995 | MS.gene060929:intron | 20.0% |
| !!! | AATATCCAGATAATTTGTAT+GGG | - | chr1.2:8736280-8736299 | None:intergenic | 20.0% |
| !!! | ATCAGTTTATTCTTTGAAAT+TGG | + | chr1.2:8734461-8734480 | MS.gene060929:intron | 20.0% |
| !!! | ATTATTTGTTTTTCCTGAAT+AGG | + | chr1.2:8737779-8737798 | MS.gene060929:intron | 20.0% |
| !!! | GTTGATTTGTATAAATGATT+CGG | + | chr1.2:8733712-8733731 | MS.gene060929:intron | 20.0% |
| !!! | TAATATCCAGATAATTTGTA+TGG | - | chr1.2:8736281-8736300 | None:intergenic | 20.0% |
| ! | AAAAAATGAGTCATGCTATA+TGG | + | chr1.2:8735877-8735896 | MS.gene060929:intron | 25.0% |
| ! | AAGCAAATGAGAATTAAACA+TGG | - | chr1.2:8736619-8736638 | None:intergenic | 25.0% |
| ! | ACAGTCTGATTTCAATAAAA+CGG | + | chr1.2:8734302-8734321 | MS.gene060929:intron | 25.0% |
| ! | ACGATATGATTTGATAAGAT+TGG | - | chr1.2:8736341-8736360 | None:intergenic | 25.0% |
| ! | ACTTATCAATAAAAAGCGAT+AGG | - | chr1.2:8735598-8735617 | None:intergenic | 25.0% |
| ! | ACTTGATATACTAACACTTA+AGG | - | chr1.2:8735761-8735780 | None:intergenic | 25.0% |
| ! | AGCAAATGAGAATTAAACAT+GGG | - | chr1.2:8736618-8736637 | None:intergenic | 25.0% |
| ! | AGTGTAGAGTTATGTATTAT+TGG | + | chr1.2:8733492-8733511 | MS.gene060929:CDS | 25.0% |
| ! | ATGTTACTGAGAATGTTATT+AGG | - | chr1.2:8733286-8733305 | None:intergenic | 25.0% |
| ! | ATTAGATGACCTTAAAATCA+AGG | - | chr1.2:8737745-8737764 | None:intergenic | 25.0% |
| ! | ATTATGAACTCTTCTAAACA+AGG | - | chr1.2:8735822-8735841 | None:intergenic | 25.0% |
| ! | ATTTCCAATTGGATCTATAT+TGG | - | chr1.2:8734960-8734979 | None:intergenic | 25.0% |
| ! | CAAATCATATCGTGTAAATA+GGG | + | chr1.2:8736348-8736367 | MS.gene060929:intron | 25.0% |
| ! | CAACATTGTACTAAAAAACA+CGG | + | chr1.2:8736647-8736666 | MS.gene060929:intron | 25.0% |
| ! | GTGTGTGAATTAAATACTTA+TGG | + | chr1.2:8735163-8735182 | MS.gene060929:intron | 25.0% |
| ! | TAGTTGAGTTTGAATGATTT+AGG | + | chr1.2:8734018-8734037 | MS.gene060929:intron | 25.0% |
| ! | TATTTCCCATACAAATTATC+TGG | + | chr1.2:8736272-8736291 | MS.gene060929:intron | 25.0% |
| ! | TCAAATCATATCGTGTAAAT+AGG | + | chr1.2:8736347-8736366 | MS.gene060929:intron | 25.0% |
| ! | TCATAATTCACTACACTTAT+GGG | + | chr1.2:8736783-8736802 | MS.gene060929:CDS | 25.0% |
| ! | TCGAAAAAGCAAAAACAAAA+AGG | + | chr1.2:8737507-8737526 | MS.gene060929:intron | 25.0% |
| ! | TTAAAAAAATGTATTGGGGA+GGG | + | chr1.2:8737329-8737348 | MS.gene060929:intron | 25.0% |
| ! | TTAGATGACCTTAAAATCAA+GGG | - | chr1.2:8737744-8737763 | None:intergenic | 25.0% |
| ! | TTCATAATTCACTACACTTA+TGG | + | chr1.2:8736782-8736801 | MS.gene060929:CDS | 25.0% |
| ! | TTGAAATCACTACTGTTATT+TGG | + | chr1.2:8734105-8734124 | MS.gene060929:intron | 25.0% |
| !! | ACAGTGTAGAACTTTTTATA+CGG | - | chr1.2:8735076-8735095 | None:intergenic | 25.0% |
| !! | ATAAAAATCAAGTTGTTGTG+AGG | - | chr1.2:8735380-8735399 | None:intergenic | 25.0% |
| !! | ATTTGAAATCCTTGACTAAA+TGG | - | chr1.2:8735726-8735745 | None:intergenic | 25.0% |
| !! | TGTAGTACTATACTTGATTT+TGG | + | chr1.2:8733898-8733917 | MS.gene060929:intron | 25.0% |
| !! | TTGATTACATTAGTCCTTTT+GGG | + | chr1.2:8734435-8734454 | MS.gene060929:intron | 25.0% |
| !! | TTTTAGTACAATGTTGGAAA+TGG | - | chr1.2:8736643-8736662 | None:intergenic | 25.0% |
| !!! | AAAGATGGTATTTTTGTGAT+TGG | + | chr1.2:8733923-8733942 | MS.gene060929:intron | 25.0% |
| !!! | AAGATGGTATTTTTGTGATT+GGG | + | chr1.2:8733924-8733943 | MS.gene060929:intron | 25.0% |
| !!! | AGAACAGTTTTTCTTTAAGA+GGG | - | chr1.2:8737671-8737690 | None:intergenic | 25.0% |
| !!! | CATTTTCTATTCTAGGATTT+TGG | + | chr1.2:8734737-8734756 | MS.gene060929:intron | 25.0% |
| !!! | CCGTAGTTTGTAATTTTTTT+TGG | + | chr1.2:8734188-8734207 | MS.gene060929:intron | 25.0% |
| !!! | TCTTCTTGTTTTGAATGTTT+GGG | + | chr1.2:8737896-8737915 | MS.gene060929:intron | 25.0% |
| !!! | TTATTGGTTTAAGAAGATGA+AGG | + | chr1.2:8733508-8733527 | MS.gene060929:CDS | 25.0% |
| !!! | TTATTTTGTATCGTTGATAC+AGG | + | chr1.2:8735401-8735420 | MS.gene060929:intron | 25.0% |
| AAAGCAAAAACAAAAAGGTG+AGG | + | chr1.2:8737512-8737531 | MS.gene060929:intron | 30.0% | |
| AACCAATTTGAGTAAAGTCA+TGG | + | chr1.2:8737605-8737624 | MS.gene060929:intron | 30.0% | |
| AAGCAAAAACAAAAAGGTGA+GGG | + | chr1.2:8737513-8737532 | MS.gene060929:intron | 30.0% | |
| AAGTGTTAGTATATCAAGTG+TGG | + | chr1.2:8735762-8735781 | MS.gene060929:intron | 30.0% | |
| ACATACAACATCATTATCTC+AGG | + | chr1.2:8733311-8733330 | MS.gene060929:CDS | 30.0% | |
| ACTTTAACCACAACAAGTAT+TGG | + | chr1.2:8736006-8736025 | MS.gene060929:intron | 30.0% | |
| AGAAAGACATTCATACTGTT+TGG | + | chr1.2:8737702-8737721 | MS.gene060929:intron | 30.0% | |
| AGCACTTTCTCATATTTCTT+AGG | - | chr1.2:8734902-8734921 | None:intergenic | 30.0% | |
| ATCCATGACTTTACTCAAAT+TGG | - | chr1.2:8737610-8737629 | None:intergenic | 30.0% | |
| ATGACTTTACTCAAATTGGT+TGG | - | chr1.2:8737606-8737625 | None:intergenic | 30.0% | |
| ATGTATGGTGTGAAATAATC+AGG | + | chr1.2:8736907-8736926 | MS.gene060929:intron | 30.0% | |
| ATTACAGGTGAATTTCCAAT+TGG | - | chr1.2:8734971-8734990 | None:intergenic | 30.0% | |
| ATTTGAGTAAAGTCATGGAT+TGG | + | chr1.2:8737610-8737629 | MS.gene060929:intron | 30.0% | |
| CATATGGAAAAATTGGAGAA+TGG | + | chr1.2:8736939-8736958 | MS.gene060929:CDS | 30.0% | |
| CTCTTAAAGAAAAACTGTTC+TGG | + | chr1.2:8737670-8737689 | MS.gene060929:intron | 30.0% | |
| CTGATTCTGTTTACAATACA+TGG | + | chr1.2:8733468-8733487 | MS.gene060929:CDS | 30.0% | |
| GAAAGACATTCATACTGTTT+GGG | + | chr1.2:8737703-8737722 | MS.gene060929:intron | 30.0% | |
| GAACTGACATATGGAAAAAT+TGG | + | chr1.2:8736932-8736951 | MS.gene060929:CDS | 30.0% | |
| GATTTAACTCGATCAGTTTA+AGG | + | chr1.2:8737162-8737181 | MS.gene060929:intron | 30.0% | |
| GATTTGATAAGATTGGAAAC+TGG | - | chr1.2:8736334-8736353 | None:intergenic | 30.0% | |
| GCAATCACTATTTGACTATA+AGG | - | chr1.2:8734140-8734159 | None:intergenic | 30.0% | |
| GTAACCAATATAGATCCAAT+TGG | + | chr1.2:8734953-8734972 | MS.gene060929:CDS | 30.0% | |
| GTTAAAAAAATGTATTGGGG+AGG | + | chr1.2:8737328-8737347 | MS.gene060929:intron | 30.0% | |
| TAATTTAGTCCCTAAAACAG+TGG | + | chr1.2:8734349-8734368 | MS.gene060929:intron | 30.0% | |
| TACTTGATCTTGGTGAAAAA+TGG | + | chr1.2:8733741-8733760 | MS.gene060929:intron | 30.0% | |
| TAGGCTCGATATAAAAGAAA+GGG | - | chr1.2:8734883-8734902 | None:intergenic | 30.0% | |
| TAGTTGAGTTTGAGTGATTT+AGG | + | chr1.2:8733827-8733846 | MS.gene060929:intron | 30.0% | |
| TATAGTCAAATAGTGATTGC+AGG | + | chr1.2:8734140-8734159 | MS.gene060929:intron | 30.0% | |
| TCAAACTCAACTATCAACTA+TGG | - | chr1.2:8733820-8733839 | None:intergenic | 30.0% | |
| TCAAACTCAACTATCAACTT+TGG | - | chr1.2:8734011-8734030 | None:intergenic | 30.0% | |
| TGACTTTACTCAAATTGGTT+GGG | - | chr1.2:8737605-8737624 | None:intergenic | 30.0% | |
| TGGTAAAACTGATCAGTATA+TGG | + | chr1.2:8733583-8733602 | MS.gene060929:CDS | 30.0% | |
| TGTATGGTGTGAAATAATCA+GGG | + | chr1.2:8736908-8736927 | MS.gene060929:intron | 30.0% | |
| TTAAGAAAATTGCTCCAACA+TGG | + | chr1.2:8735245-8735264 | MS.gene060929:CDS | 30.0% | |
| TTAAGTCGTTGCTTAATGTA+TGG | + | chr1.2:8736892-8736911 | MS.gene060929:intron | 30.0% | |
| TTAGGCTCGATATAAAAGAA+AGG | - | chr1.2:8734884-8734903 | None:intergenic | 30.0% | |
| TTTAAGAAGATGAAGGAAAG+TGG | + | chr1.2:8733515-8733534 | MS.gene060929:CDS | 30.0% | |
| TTTGAATGTTTGGGAGATTT+GGG | + | chr1.2:8737905-8737924 | MS.gene060929:intron | 30.0% | |
| TTTGAGAGTTTAGATCAGAA+AGG | + | chr1.2:8737190-8737209 | MS.gene060929:intron | 30.0% | |
| TTTGAGTAAAGTCATGGATT+GGG | + | chr1.2:8737611-8737630 | MS.gene060929:intron | 30.0% | |
| ! | AAGAGGGTATAAGATAACAA+TGG | - | chr1.2:8737655-8737674 | None:intergenic | 30.0% |
| ! | ATGTTGGAGCAATTTTCTTA+AGG | - | chr1.2:8735246-8735265 | None:intergenic | 30.0% |
| ! | ATTGGATCTATATTGGTTAC+AGG | - | chr1.2:8734953-8734972 | None:intergenic | 30.0% |
| ! | CAACACACAAAAAAAAGTGT+AGG | - | chr1.2:8737090-8737109 | None:intergenic | 30.0% |
| ! | CAGAACAGTTTTTCTTTAAG+AGG | - | chr1.2:8737672-8737691 | None:intergenic | 30.0% |
| ! | CTTGATTACATTAGTCCTTT+TGG | + | chr1.2:8734434-8734453 | MS.gene060929:intron | 30.0% |
| ! | TCACTACTGTTATTTGGAAA+TGG | + | chr1.2:8734111-8734130 | MS.gene060929:intron | 30.0% |
| ! | TCTTCAAACAAGAAGCTTTT+TGG | + | chr1.2:8736503-8736522 | MS.gene060929:intron | 30.0% |
| ! | TGTTGGAGCAATTTTCTTAA+GGG | - | chr1.2:8735245-8735264 | None:intergenic | 30.0% |
| ! | TTTACTAGGATTTTGCATTC+TGG | + | chr1.2:8733563-8733582 | MS.gene060929:CDS | 30.0% |
| ! | TTTATTGATGGTTTACGTGA+AGG | - | chr1.2:8733368-8733387 | None:intergenic | 30.0% |
| ! | TTTTCCTGAATAGGAACAAT+TGG | + | chr1.2:8737788-8737807 | MS.gene060929:intron | 30.0% |
| ! | TTTTGAATGTTTGGGAGATT+TGG | + | chr1.2:8737904-8737923 | MS.gene060929:intron | 30.0% |
| !! | AATTTTGTCCTCAAGTTGTA+GGG | - | chr1.2:8734569-8734588 | None:intergenic | 30.0% |
| !! | GTTTTATTGAAATCAGACTG+TGG | - | chr1.2:8734303-8734322 | None:intergenic | 30.0% |
| !! | TACTTCTAAAATCACACGTA+TGG | - | chr1.2:8735118-8735137 | None:intergenic | 30.0% |
| !! | TACTTGATTTTGGAGAAAGA+TGG | + | chr1.2:8733908-8733927 | MS.gene060929:intron | 30.0% |
| !! | TGTTGGTAACATATTACACA+AGG | + | chr1.2:8735456-8735475 | MS.gene060929:CDS | 30.0% |
| !! | TTCATGATTCAGGTTGAATA+AGG | + | chr1.2:8735481-8735500 | MS.gene060929:intron | 30.0% |
| !! | TTTATTCTTTGAAATTGGCG+CGG | + | chr1.2:8734466-8734485 | MS.gene060929:intron | 30.0% |
| !! | TTTTTCGAAAACTCAGTATC+CGG | - | chr1.2:8737495-8737514 | None:intergenic | 30.0% |
| !!! | CAATTTGGTTTTCCTTTTCT+AGG | + | chr1.2:8737951-8737970 | MS.gene060929:intron | 30.0% |
| !!! | CGTGTTTTTTAGTACAATGT+TGG | - | chr1.2:8736649-8736668 | None:intergenic | 30.0% |
| !!! | CTACACTTTTTTTTGTGTGT+TGG | + | chr1.2:8737088-8737107 | MS.gene060929:intron | 30.0% |
| !!! | CTCTTCTTGTTTTGAATGTT+TGG | + | chr1.2:8737895-8737914 | MS.gene060929:intron | 30.0% |
| !!! | GAAGCACTTTTTCTATTAAG+TGG | - | chr1.2:8733413-8733432 | None:intergenic | 30.0% |
| !!! | GTGTGTTGGTTTTGTTTTTT+GGG | + | chr1.2:8737102-8737121 | MS.gene060929:intron | 30.0% |
| !!! | TGTGTGTTGGTTTTGTTTTT+TGG | + | chr1.2:8737101-8737120 | MS.gene060929:intron | 30.0% |
| AAAGGTTGAGCAACAAAAGT+AGG | - | chr1.2:8733617-8733636 | None:intergenic | 35.0% | |
| AACATGGATGAATGTTTCCT+TGG | + | chr1.2:8735261-8735280 | MS.gene060929:CDS | 35.0% | |
| AAGCGATAGGTAGAAATCAA+TGG | - | chr1.2:8735585-8735604 | None:intergenic | 35.0% | |
| AAGGAAACATTCATCCATGT+TGG | - | chr1.2:8735262-8735281 | None:intergenic | 35.0% | |
| AAGGTTGAGCAACAAAAGTA+GGG | - | chr1.2:8733616-8733635 | None:intergenic | 35.0% | |
| AATAAACTGATCGACCCAAA+AGG | - | chr1.2:8734452-8734471 | None:intergenic | 35.0% | |
| AATGTATGTTCCTTTATGGC+AGG | + | chr1.2:8734623-8734642 | MS.gene060929:intron | 35.0% | |
| ACATTGTCCTTAATAGACCA+TGG | + | chr1.2:8734649-8734668 | MS.gene060929:CDS | 35.0% | |
| ACTGCAAATCACTCATGTTT+GGG | - | chr1.2:8736117-8736136 | None:intergenic | 35.0% | |
| AGAGTTTAGATCAGAAAGGA+GGG | + | chr1.2:8737194-8737213 | MS.gene060929:intron | 35.0% | |
| AGCGGAAGACTCTTTATATA+GGG | - | chr1.2:8736411-8736430 | None:intergenic | 35.0% | |
| AGGATAAAGACTAGAGGATA+GGG | + | chr1.2:8737226-8737245 | MS.gene060929:intron | 35.0% | |
| ATAAAACGGCCTAACATTCT+TGG | + | chr1.2:8734316-8734335 | MS.gene060929:intron | 35.0% | |
| ATAATAGATCGGTACCTTCA+TGG | - | chr1.2:8736819-8736838 | None:intergenic | 35.0% | |
| ATGAAACATACCACACTTTC+CGG | - | chr1.2:8737031-8737050 | None:intergenic | 35.0% | |
| ATGGAAAAATTGGAGAATGG+AGG | + | chr1.2:8736942-8736961 | MS.gene060929:CDS | 35.0% | |
| ATGTATGTTCCTTTATGGCA+GGG | + | chr1.2:8734624-8734643 | MS.gene060929:intron | 35.0% | |
| CATTGTCCTTAATAGACCAT+GGG | + | chr1.2:8734650-8734669 | MS.gene060929:CDS | 35.0% | |
| CCTTATTATCCCATTAAGTG+GGG | + | chr1.2:8734254-8734273 | MS.gene060929:intron | 35.0% | |
| CTCACTCACAATATAGTCAA+TGG | - | chr1.2:8734066-8734085 | None:intergenic | 35.0% | |
| CTTAATGGGATAATAAGGCT+TGG | - | chr1.2:8734252-8734271 | None:intergenic | 35.0% | |
| GAAAAAACGAGAGAGATATG+TGG | - | chr1.2:8736459-8736478 | None:intergenic | 35.0% | |
| GGAAATTCACCTGTAATTGT+TGG | + | chr1.2:8734974-8734993 | MS.gene060929:CDS | 35.0% | |
| GGTTTCACAATGATATGATC+TGG | - | chr1.2:8734821-8734840 | None:intergenic | 35.0% | |
| GTAAACGGTTAAGATAAGCT+TGG | - | chr1.2:8734221-8734240 | None:intergenic | 35.0% | |
| GTGTTATCAAGGTTCTCATA+TGG | + | chr1.2:8735536-8735555 | MS.gene060929:intron | 35.0% | |
| GTTATGAGGATAAAGACTAG+AGG | + | chr1.2:8737220-8737239 | MS.gene060929:intron | 35.0% | |
| TAAGTGGCATCTTGATTACT+GGG | - | chr1.2:8733397-8733416 | None:intergenic | 35.0% | |
| TCAAAACAAGAAGAGCTTGA+AGG | - | chr1.2:8737890-8737909 | None:intergenic | 35.0% | |
| TCTACGTATTATAGAGAGAG+AGG | - | chr1.2:8737375-8737394 | None:intergenic | 35.0% | |
| TGATTCACTCCAAGAATGTT+AGG | - | chr1.2:8734328-8734347 | None:intergenic | 35.0% | |
| TTAAGTGGCATCTTGATTAC+TGG | - | chr1.2:8733398-8733417 | None:intergenic | 35.0% | |
| ! | AAACCGATAAAGCTTTTGGA+TGG | + | chr1.2:8735302-8735321 | MS.gene060929:CDS | 35.0% |
| ! | AACCGATAAAGCTTTTGGAT+GGG | + | chr1.2:8735303-8735322 | MS.gene060929:CDS | 35.0% |
| ! | CATTGACTATATTGTGAGTG+AGG | + | chr1.2:8734064-8734083 | MS.gene060929:intron | 35.0% |
| ! | CTATGGATCCCTTGATTTTA+AGG | + | chr1.2:8737733-8737752 | MS.gene060929:intron | 35.0% |
| ! | GATTGGTCATACAGATTAGT+TGG | + | chr1.2:8737461-8737480 | MS.gene060929:intron | 35.0% |
| ! | GCCTTATTATCCCATTAAGT+GGG | + | chr1.2:8734253-8734272 | MS.gene060929:intron | 35.0% |
| ! | TCTAAAATCACACGTATGGT+TGG | - | chr1.2:8735114-8735133 | None:intergenic | 35.0% |
| !! | ACTGGGTCGATTTTTATTGA+TGG | - | chr1.2:8733380-8733399 | None:intergenic | 35.0% |
| !! | AGCCTTATTATCCCATTAAG+TGG | + | chr1.2:8734252-8734271 | MS.gene060929:intron | 35.0% |
| !! | CAATTTTGTCCTCAAGTTGT+AGG | - | chr1.2:8734570-8734589 | None:intergenic | 35.0% |
| !! | CTTTTTGGTCCTGTTACTAT+AGG | + | chr1.2:8736518-8736537 | MS.gene060929:intron | 35.0% |
| !!! | GTTGGTTTTGTTTTTTGGGA+GGG | + | chr1.2:8737106-8737125 | MS.gene060929:intron | 35.0% |
| !!! | TGTTGGTTTTGTTTTTTGGG+AGG | + | chr1.2:8737105-8737124 | MS.gene060929:intron | 35.0% |
| !!! | TTGGTTTTGTTTTTTGGGAG+GGG | + | chr1.2:8737107-8737126 | MS.gene060929:intron | 35.0% |
| AAAACTCAGTATCCGGTTCA+AGG | - | chr1.2:8737488-8737507 | None:intergenic | 40.0% | |
| AACTTAGCCAGAGATGGAAT+GGG | + | chr1.2:8734848-8734867 | MS.gene060929:CDS | 40.0% | |
| AAGTAACCACACTAACACGA+AGG | - | chr1.2:8737057-8737076 | None:intergenic | 40.0% | |
| AAGTTGTTGTGAGGCTAAGA+AGG | - | chr1.2:8735371-8735390 | None:intergenic | 40.0% | |
| AATCAGGGTGAACTGACATA+TGG | + | chr1.2:8736923-8736942 | MS.gene060929:intron | 40.0% | |
| ACAATGTAACCCTGCCATAA+AGG | - | chr1.2:8734636-8734655 | None:intergenic | 40.0% | |
| ACACAAGGACTTCATGATTC+AGG | + | chr1.2:8735471-8735490 | MS.gene060929:CDS | 40.0% | |
| ACACGACTTCAAGTAAAGCA+CGG | + | chr1.2:8735681-8735700 | MS.gene060929:intron | 40.0% | |
| AGTATATCAAGTGTGGTGAG+TGG | + | chr1.2:8735784-8735803 | MS.gene060929:intron | 40.0% | |
| AGTGAGGTAGGTAGATTGTT+AGG | + | chr1.2:8734080-8734099 | MS.gene060929:intron | 40.0% | |
| AGTTGTAGGGTAGGTCAAAT+TGG | - | chr1.2:8734556-8734575 | None:intergenic | 40.0% | |
| AGTTTAGATCAGAAAGGAGG+GGG | + | chr1.2:8737196-8737215 | MS.gene060929:intron | 40.0% | |
| ATTATCCCATTAAGTGGGGT+CGG | + | chr1.2:8734258-8734277 | MS.gene060929:intron | 40.0% | |
| ATTATGTATGTCAGCCACCA+TGG | + | chr1.2:8736738-8736757 | MS.gene060929:intron | 40.0% | |
| ATTCCATCTCTGGCTAAGTT+GGG | - | chr1.2:8734848-8734867 | None:intergenic | 40.0% | |
| CAAATGCCCATGGTCTATTA+AGG | - | chr1.2:8734659-8734678 | None:intergenic | 40.0% | |
| CAATCTCAAAATCCACTTGC+AGG | - | chr1.2:8737446-8737465 | None:intergenic | 40.0% | |
| CACTGCAAATCACTCATGTT+TGG | - | chr1.2:8736118-8736137 | None:intergenic | 40.0% | |
| CAGCGGAAGACTCTTTATAT+AGG | - | chr1.2:8736412-8736431 | None:intergenic | 40.0% | |
| CCAGGAAAATCTTGTCTCAA+AGG | - | chr1.2:8733344-8733363 | None:intergenic | 40.0% | |
| CCCCACTTAATGGGATAATA+AGG | - | chr1.2:8734257-8734276 | None:intergenic | 40.0% | |
| CGGAGGAACTAATTTGATTG+AGG | + | chr1.2:8734486-8734505 | MS.gene060929:intron | 40.0% | |
| CTAGGTGACTCTAGTGAAAA+TGG | + | chr1.2:8737969-8737988 | MS.gene060929:intron | 40.0% | |
| GACTATATTGTGAGTGAGGT+AGG | + | chr1.2:8734068-8734087 | MS.gene060929:intron | 40.0% | |
| GAGAGTTTAGATCAGAAAGG+AGG | + | chr1.2:8737193-8737212 | MS.gene060929:intron | 40.0% | |
| GAGGATAAAGACTAGAGGAT+AGG | + | chr1.2:8737225-8737244 | MS.gene060929:intron | 40.0% | |
| GAGTTTAGATCAGAAAGGAG+GGG | + | chr1.2:8737195-8737214 | MS.gene060929:intron | 40.0% | |
| GATACCTTGCCAACAATTAC+AGG | - | chr1.2:8734986-8735005 | None:intergenic | 40.0% | |
| GCGGAAGACTCTTTATATAG+GGG | - | chr1.2:8736410-8736429 | None:intergenic | 40.0% | |
| GGATTTCAAATGTCCTGCAT+AGG | + | chr1.2:8735735-8735754 | MS.gene060929:intron | 40.0% | |
| GGCTTGGATGTTGTTGTAAA+CGG | - | chr1.2:8734236-8734255 | None:intergenic | 40.0% | |
| GGTGATGACAATTCTGGTAT+GGG | + | chr1.2:8733536-8733555 | MS.gene060929:CDS | 40.0% | |
| GTGACATCTCATCAACAAAG+CGG | + | chr1.2:8736159-8736178 | MS.gene060929:intron | 40.0% | |
| GTGAGGTAGGTAGATTGTTA+GGG | + | chr1.2:8734081-8734100 | MS.gene060929:intron | 40.0% | |
| GTGTGTTATGAACTACACAG+CGG | - | chr1.2:8736429-8736448 | None:intergenic | 40.0% | |
| TAAAGACTAGAGGATAGGGA+AGG | + | chr1.2:8737230-8737249 | MS.gene060929:intron | 40.0% | |
| TACGCGATTCCTATAGTAAC+AGG | - | chr1.2:8736530-8736549 | None:intergenic | 40.0% | |
| TACTGTCGTGTGTGTTATCA+AGG | + | chr1.2:8735525-8735544 | MS.gene060929:intron | 40.0% | |
| TCACTAGAGTCACCTAGAAA+AGG | - | chr1.2:8737966-8737985 | None:intergenic | 40.0% | |
| TCCCTAAAACAGTGGATATC+AGG | + | chr1.2:8734357-8734376 | MS.gene060929:intron | 40.0% | |
| TGAGCCAATTGTTCCTATTC+AGG | - | chr1.2:8737795-8737814 | None:intergenic | 40.0% | |
| TGTTTCCTTGGCAATGAAGA+AGG | + | chr1.2:8735273-8735292 | MS.gene060929:CDS | 40.0% | |
| TTACTCAAATTGGTTGGGCT+CGG | - | chr1.2:8737600-8737619 | None:intergenic | 40.0% | |
| TTATGTATGTCAGCCACCAT+GGG | + | chr1.2:8736739-8736758 | MS.gene060929:intron | 40.0% | |
| TTCACCTGTAATTGTTGGCA+AGG | + | chr1.2:8734979-8734998 | MS.gene060929:CDS | 40.0% | |
| TTGTGCTAGGAGGAACAAAA+GGG | - | chr1.2:8737547-8737566 | None:intergenic | 40.0% | |
| TTTGTGCTAGGAGGAACAAA+AGG | - | chr1.2:8737548-8737567 | None:intergenic | 40.0% | |
| ! | AGATTAGTTGGTCCTTGAAC+CGG | + | chr1.2:8737473-8737492 | MS.gene060929:intron | 40.0% |
| ! | CAAACATGAGTGATTTGCAG+TGG | + | chr1.2:8736116-8736135 | MS.gene060929:intron | 40.0% |
| ! | CAACTGTCCAATACTTGTTG+TGG | - | chr1.2:8736016-8736035 | None:intergenic | 40.0% |
| ! | CACCCATCCAAAAGCTTTAT+CGG | - | chr1.2:8735308-8735327 | None:intergenic | 40.0% |
| ! | CCTGAAACCGATAAAGCTTT+TGG | + | chr1.2:8735298-8735317 | MS.gene060929:CDS | 40.0% |
| ! | GAAAGTGGTGATGACAATTC+TGG | + | chr1.2:8733530-8733549 | MS.gene060929:CDS | 40.0% |
| ! | GCCTGATATCCACTGTTTTA+GGG | - | chr1.2:8734361-8734380 | None:intergenic | 40.0% |
| ! | TCGGAAAGTGTACTTGATCT+TGG | + | chr1.2:8733731-8733750 | MS.gene060929:intron | 40.0% |
| ! | TGCCTGATATCCACTGTTTT+AGG | - | chr1.2:8734362-8734381 | None:intergenic | 40.0% |
| ! | TGGTGATGACAATTCTGGTA+TGG | + | chr1.2:8733535-8733554 | MS.gene060929:CDS | 40.0% |
| !! | CCAAAAGCTTTATCGGTTTC+AGG | - | chr1.2:8735301-8735320 | None:intergenic | 40.0% |
| !! | TGTGTACTAGTCTTTGTGCT+AGG | - | chr1.2:8737560-8737579 | None:intergenic | 40.0% |
| !!! | CCTTTGAGACAAGATTTTCC+TGG | + | chr1.2:8733341-8733360 | MS.gene060929:CDS | 40.0% |
| !!! | CTGCAAGTGGATTTTGAGAT+TGG | + | chr1.2:8737444-8737463 | MS.gene060929:intron | 40.0% |
| !!! | GGTGGCAATGTCAGATTTTT+TGG | - | chr1.2:8736998-8737017 | None:intergenic | 40.0% |
| !!! | TGGTTTTGTTTTTTGGGAGG+GGG | + | chr1.2:8737108-8737127 | MS.gene060929:intron | 40.0% |
| AAGTACTACCCTGAGGAGAA+CGG | + | chr1.2:8734926-8734945 | MS.gene060929:CDS | 45.0% | |
| ACCATGAAGAGCAGACGAAA+CGG | - | chr1.2:8735437-8735456 | None:intergenic | 45.0% | |
| ACTGTTTGGGAGAGTTGCTA+TGG | + | chr1.2:8737716-8737735 | MS.gene060929:intron | 45.0% | |
| AGAACCTGATCCATTCCAGA+AGG | - | chr1.2:8733641-8733660 | None:intergenic | 45.0% | |
| AGCTTGAAGGAAACGTGTGA+TGG | - | chr1.2:8737877-8737896 | None:intergenic | 45.0% | |
| AGGATCCTTCTTCATTGCCA+AGG | - | chr1.2:8735281-8735300 | None:intergenic | 45.0% | |
| ATACCCAACTTAGCCAGAGA+TGG | + | chr1.2:8734842-8734861 | MS.gene060929:CDS | 45.0% | |
| CAAAAACACTCACCTGCAAG+TGG | + | chr1.2:8737431-8737450 | MS.gene060929:intron | 45.0% | |
| CAACTTAGCCAGAGATGGAA+TGG | + | chr1.2:8734847-8734866 | MS.gene060929:CDS | 45.0% | |
| CACACACGAATACTCATGAC+AGG | + | chr1.2:8735912-8735931 | MS.gene060929:intron | 45.0% | |
| CATCTTCCTTCGTGTTAGTG+TGG | + | chr1.2:8737048-8737067 | MS.gene060929:intron | 45.0% | |
| CATTCCATCTCTGGCTAAGT+TGG | - | chr1.2:8734849-8734868 | None:intergenic | 45.0% | |
| CTAACACTTAAGGCCTATGC+AGG | - | chr1.2:8735751-8735770 | None:intergenic | 45.0% | |
| CTTGTGCAGCCATTTAGTCA+AGG | + | chr1.2:8735714-8735733 | MS.gene060929:intron | 45.0% | |
| GATGACAATTCTGGTATGGG+TGG | + | chr1.2:8733539-8733558 | MS.gene060929:CDS | 45.0% | |
| GATTTGCAGTGGCAAGGAAT+GGG | + | chr1.2:8736127-8736146 | MS.gene060929:intron | 45.0% | |
| GTCATGAGTATTCGTGTGTG+AGG | - | chr1.2:8735912-8735931 | None:intergenic | 45.0% | |
| TACTCAAATTGGTTGGGCTC+GGG | - | chr1.2:8737599-8737618 | None:intergenic | 45.0% | |
| TGATCCATTCCAGAAGGCAA+AGG | - | chr1.2:8733635-8733654 | None:intergenic | 45.0% | |
| TGGGTGTGACTATTCCATGA+AGG | + | chr1.2:8736802-8736821 | MS.gene060929:CDS | 45.0% | |
| TGTGCTAGGAGGAACAAAAG+GGG | - | chr1.2:8737546-8737565 | None:intergenic | 45.0% | |
| TTGACCTACCCTACAACTTG+AGG | + | chr1.2:8734558-8734577 | MS.gene060929:intron | 45.0% | |
| TTGCCAAGTTCTTTGTCCCA+TGG | - | chr1.2:8736758-8736777 | None:intergenic | 45.0% | |
| ! | ATGAGTGATTTGCAGTGGCA+AGG | + | chr1.2:8736121-8736140 | MS.gene060929:intron | 45.0% |
| ! | CACTTGCAGGTGAGTGTTTT+TGG | - | chr1.2:8737433-8737452 | None:intergenic | 45.0% |
| ! | CCAGTTCGGAATATTTGCTG+CGG | - | chr1.2:8738004-8738023 | None:intergenic | 45.0% |
| ! | CTGGTATGGGTGGATTTACT+AGG | + | chr1.2:8733549-8733568 | MS.gene060929:CDS | 45.0% |
| ! | TCAACCTTTGCCTTCTGGAA+TGG | + | chr1.2:8733628-8733647 | MS.gene060929:CDS | 45.0% |
| ! | TCTCTGGCTAAGTTGGGTAT+AGG | - | chr1.2:8734842-8734861 | None:intergenic | 45.0% |
| ! | TGATTTGCAGTGGCAAGGAA+TGG | + | chr1.2:8736126-8736145 | MS.gene060929:intron | 45.0% |
| ! | TTGTCCTCAAGTTGTAGGGT+AGG | - | chr1.2:8734565-8734584 | None:intergenic | 45.0% |
| !! | ATTCTTTGAAATTGGCGCGG+AGG | + | chr1.2:8734469-8734488 | MS.gene060929:intron | 45.0% |
| !! | GTACTAGTCTTTGTGCTAGG+AGG | - | chr1.2:8737557-8737576 | None:intergenic | 45.0% |
| !! | TTTGCCTTCTGGAATGGATC+AGG | + | chr1.2:8733634-8733653 | MS.gene060929:CDS | 45.0% |
| !!! | GGTGAGTGTTTTTGGAAGAG+AGG | - | chr1.2:8737425-8737444 | None:intergenic | 45.0% |
| !!! | GGTTTTGTTTTTTGGGAGGG+GGG | + | chr1.2:8737109-8737128 | MS.gene060929:intron | 45.0% |
| !!! | TTTATATATTTATTTTTTCT+GGG | + | chr1.2:8733685-8733704 | MS.gene060929:intron | 5.0% |
| !!! | TTTTATATATTTATTTTTTC+TGG | + | chr1.2:8733684-8733703 | MS.gene060929:intron | 5.0% |
| AATCTGACATTGCCACCACC+TGG | + | chr1.2:8737001-8737020 | MS.gene060929:CDS | 50.0% | |
| AGAAAGGAGGGGGAGTTATG+AGG | + | chr1.2:8737206-8737225 | MS.gene060929:intron | 50.0% | |
| AGCCACTGTACAAATGCCCA+TGG | - | chr1.2:8734669-8734688 | None:intergenic | 50.0% | |
| ATGTAGCCGACCCCACTTAA+TGG | - | chr1.2:8734267-8734286 | None:intergenic | 50.0% | |
| CCAAGTTCTTTGTCCCATGG+TGG | - | chr1.2:8736755-8736774 | None:intergenic | 50.0% | |
| CCACCATGGGACAAAGAACT+TGG | + | chr1.2:8736752-8736771 | MS.gene060929:CDS | 50.0% | |
| CCGCAGCAAATATTCCGAAC+TGG | + | chr1.2:8738001-8738020 | MS.gene060929:CDS | 50.0% | |
| GACCATGGGCATTTGTACAG+TGG | + | chr1.2:8734664-8734683 | MS.gene060929:CDS | 50.0% | |
| GATGGTTTACGTGAAGGACC+AGG | - | chr1.2:8733362-8733381 | None:intergenic | 50.0% | |
| GTGCTAGGAGGAACAAAAGG+GGG | - | chr1.2:8737545-8737564 | None:intergenic | 50.0% | |
| GTGGTGAGTGGTGATTCTAG+AGG | + | chr1.2:8735796-8735815 | MS.gene060929:intron | 50.0% | |
| GTTGCTCAACCTTTGCCTTC+TGG | + | chr1.2:8733623-8733642 | MS.gene060929:CDS | 50.0% | |
| TCGTCTGCTCTTCATGGTGT+TGG | + | chr1.2:8735439-8735458 | MS.gene060929:CDS | 50.0% | |
| TGTAGCCGACCCCACTTAAT+GGG | - | chr1.2:8734266-8734285 | None:intergenic | 50.0% | |
| TTACAGGTCCGTTCTCCTCA+GGG | - | chr1.2:8734937-8734956 | None:intergenic | 50.0% | |
| !! | GCTGAGAAAGTACTACCCTG+AGG | + | chr1.2:8734919-8734938 | MS.gene060929:CDS | 50.0% |
| ACACTTTCCGGAACACCAGG+TGG | - | chr1.2:8737019-8737038 | None:intergenic | 55.0% | |
| ACCACACTTTCCGGAACACC+AGG | - | chr1.2:8737022-8737041 | None:intergenic | 55.0% | |
| ACCTGGTGTTCCGGAAAGTG+TGG | + | chr1.2:8737018-8737037 | MS.gene060929:CDS | 55.0% | |
| ATTGCCACCACCTGGTGTTC+CGG | + | chr1.2:8737009-8737028 | MS.gene060929:CDS | 55.0% | |
| CAAATTGGTTGGGCTCGGGT+TGG | - | chr1.2:8737595-8737614 | None:intergenic | 55.0% | |
| CTAGGAGGAACAAAAGGGGG+AGG | - | chr1.2:8737542-8737561 | None:intergenic | 55.0% | |
| GCCGTTTCGTCTGCTCTTCA+TGG | + | chr1.2:8735433-8735452 | MS.gene060929:CDS | 55.0% | |
| GTTACAGGTCCGTTCTCCTC+AGG | - | chr1.2:8734938-8734957 | None:intergenic | 55.0% | |
| TGCAGCTCCCATTCCATCTC+TGG | - | chr1.2:8734858-8734877 | None:intergenic | 55.0% | |
| !!! | TTTTTGGGAGGGGGGTGTTC+TGG | + | chr1.2:8737117-8737136 | MS.gene060929:intron | 55.0% |
| CTTTCCGGAACACCAGGTGG+TGG | - | chr1.2:8737016-8737035 | None:intergenic | 60.0% | |
| !! | ATTGGTTGGGCTCGGGTTGG+TGG | - | chr1.2:8737592-8737611 | None:intergenic | 60.0% |
| !! | GGTTGGGCTCGGGTTGGTGG+CGG | - | chr1.2:8737589-8737608 | None:intergenic | 70.0% |
| !! | GTTGGGCTCGGGTTGGTGGC+GGG | - | chr1.2:8737588-8737607 | None:intergenic | 70.0% |
| !! | TTGGGCTCGGGTTGGTGGCG+GGG | - | chr1.2:8737587-8737606 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 8733254 | 8738032 | 8733254 | ID=MS.gene060929 |
| chr1.2 | mRNA | 8733254 | 8738032 | 8733254 | ID=MS.gene060929.t1;Parent=MS.gene060929 |
| chr1.2 | exon | 8733254 | 8733655 | 8733254 | ID=MS.gene060929.t1.exon1;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8733254 | 8733655 | 8733254 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8734645 | 8734712 | 8734645 | ID=MS.gene060929.t1.exon2;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8734645 | 8734712 | 8734645 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8734799 | 8735000 | 8734799 | ID=MS.gene060929.t1.exon3;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8734799 | 8735000 | 8734799 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8735238 | 8735335 | 8735238 | ID=MS.gene060929.t1.exon4;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8735238 | 8735335 | 8735238 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8735423 | 8735492 | 8735423 | ID=MS.gene060929.t1.exon5;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8735423 | 8735492 | 8735423 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8736752 | 8736823 | 8736752 | ID=MS.gene060929.t1.exon6;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8736752 | 8736823 | 8736752 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8736929 | 8737039 | 8736929 | ID=MS.gene060929.t1.exon7;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8736929 | 8737039 | 8736929 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| chr1.2 | exon | 8737973 | 8738032 | 8737973 | ID=MS.gene060929.t1.exon8;Parent=MS.gene060929.t1 |
| chr1.2 | CDS | 8737973 | 8738032 | 8737973 | ID=cds.MS.gene060929.t1;Parent=MS.gene060929.t1 |
| Gene Sequence |
| Protein sequence |
