Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70800.t1 | XP_024638010.1 | 97.8 | 939 | 21 | 0 | 1 | 939 | 1 | 939 | 0.00E+00 | 1894.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70800.t1 | Q9FQ04 | 63.8 | 954 | 304 | 12 | 1 | 928 | 1 | 939 | 0.0e+00 | 1190.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70800.t1 | A0A396JT30 | 97.6 | 941 | 21 | 1 | 1 | 939 | 1 | 941 | 0.0e+00 | 1889.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene46845 | MS.gene70800 | PPI |
MS.gene70800 | MS.gene85722 | PPI |
MS.gene70800 | MS.gene39725 | PPI |
MS.gene70800 | MS.gene64202 | PPI |
MS.gene019784 | MS.gene70800 | PPI |
MS.gene64000 | MS.gene70800 | PPI |
MS.gene70800 | MS.gene03315 | PPI |
MS.gene70800 | MS.gene57277 | PPI |
MS.gene24174 | MS.gene70800 | PPI |
MS.gene80364 | MS.gene70800 | PPI |
MS.gene27050 | MS.gene70800 | PPI |
MS.gene70800 | MS.gene48145 | PPI |
MS.gene70800 | MS.gene03346 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70800.t1 | MTR_7g114570 | 72.141 | 962 | 238 | 11 | 1 | 939 | 1 | 955 | 0.0 | 1365 |
MS.gene70800.t1 | MTR_7g114570 | 71.310 | 962 | 235 | 12 | 1 | 939 | 1 | 944 | 0.0 | 1341 |
MS.gene70800.t1 | MTR_4g051920 | 41.392 | 819 | 309 | 15 | 1 | 737 | 1 | 730 | 0.0 | 591 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene70800.t1 | AT1G54490 | 63.941 | 954 | 303 | 12 | 1 | 928 | 1 | 939 | 0.0 | 1185 |
MS.gene70800.t1 | AT1G54490 | 63.164 | 885 | 291 | 11 | 64 | 928 | 12 | 881 | 0.0 | 1079 |
MS.gene70800.t1 | AT1G75660 | 68.523 | 413 | 123 | 3 | 1 | 406 | 1 | 413 | 0.0 | 557 |
MS.gene70800.t1 | AT1G75660 | 50.133 | 375 | 163 | 4 | 409 | 761 | 501 | 873 | 9.87e-117 | 382 |
MS.gene70800.t1 | AT5G42540 | 64.269 | 417 | 134 | 5 | 1 | 406 | 1 | 413 | 3.77e-173 | 530 |
MS.gene70800.t1 | AT5G42540 | 49.555 | 337 | 162 | 3 | 432 | 760 | 521 | 857 | 5.47e-102 | 342 |
MS.gene70800.t1 | AT5G42540 | 64.269 | 417 | 134 | 5 | 1 | 406 | 1 | 413 | 6.39e-173 | 530 |
MS.gene70800.t1 | AT5G42540 | 47.989 | 348 | 162 | 4 | 432 | 760 | 521 | 868 | 5.31e-99 | 334 |
Find 242 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCGTCCTCAGCTTTAGTTTC+TGG | 0.126708 | 1.2:-61006038 | None:intergenic |
CCATCGAGGCCGCCAATTTC+TGG | 0.148161 | 1.2:+61011882 | MS.gene70800:CDS |
TACCCCTGGTACTAAATTTA+TGG | 0.159962 | 1.2:+61005311 | MS.gene70800:CDS |
AACCTAGCATTTGCGTTAAT+TGG | 0.176869 | 1.2:-61010564 | None:intergenic |
AAAACCCAGTCTTCACATTT+TGG | 0.192220 | 1.2:-61011824 | None:intergenic |
GGAACGTTGCTGATTCATTT+TGG | 0.198460 | 1.2:-61005072 | None:intergenic |
CAAACCATTTGATCAGCTTA+TGG | 0.199225 | 1.2:+61009395 | MS.gene70800:CDS |
GTGCTTTAGTATTCCACTTT+AGG | 0.206465 | 1.2:-61011962 | None:intergenic |
CTCATCAATAAATGGCAATT+TGG | 0.206862 | 1.2:-61009819 | None:intergenic |
CACAAATCGGGGTTCTAAAT+TGG | 0.228452 | 1.2:-61011913 | None:intergenic |
AGAACACCCTTAACATTAAA+TGG | 0.238490 | 1.2:+61011562 | MS.gene70800:CDS |
ACTACACCATCCGGAGGTTT+TGG | 0.243525 | 1.2:-61010901 | None:intergenic |
TGCTTTAGTATTCCACTTTA+GGG | 0.260712 | 1.2:-61011961 | None:intergenic |
GATATTTCTTCTTGTGAATA+GGG | 0.264564 | 1.2:-61006079 | None:intergenic |
AATTTCTTCTCATCAATAAA+TGG | 0.269485 | 1.2:-61009827 | None:intergenic |
ATGCACTGCCTGACAAATAT+AGG | 0.272218 | 1.2:+61009520 | MS.gene70800:CDS |
TGAATATTTGCAATATGAAT+TGG | 0.308477 | 1.2:+61006215 | MS.gene70800:CDS |
AGCAACGTTCCCGGCGGTTC+CGG | 0.309948 | 1.2:+61005084 | MS.gene70800:CDS |
TTGGTTGTTGGTCCAGAAAT+TGG | 0.315729 | 1.2:-61011894 | None:intergenic |
TATTATTCCATTTAATGTTA+AGG | 0.315998 | 1.2:-61011569 | None:intergenic |
CTAGGATACATTCCATTTAC+AGG | 0.321321 | 1.2:-61011984 | None:intergenic |
AGGTATTATGTTGAAAAGTT+TGG | 0.322326 | 1.2:+61007384 | MS.gene70800:CDS |
AATACTAAAGCACCTGTAAA+TGG | 0.324348 | 1.2:+61011972 | MS.gene70800:CDS |
TCTGGATATGGAAAATATTC+TGG | 0.324999 | 1.2:+61011660 | MS.gene70800:CDS |
ATTCACAGTTTCTTAACATC+TGG | 0.326588 | 1.2:+61006184 | MS.gene70800:intron |
CTTTCTGATTCGAATGTTCC+TGG | 0.326687 | 1.2:+61005596 | MS.gene70800:CDS |
TACCAGAATCTGGAGTTTCT+TGG | 0.327695 | 1.2:-61012085 | None:intergenic |
GCAACGTTCCCGGCGGTTCC+GGG | 0.327820 | 1.2:+61005085 | MS.gene70800:CDS |
ATTATTCCATTTAATGTTAA+GGG | 0.331340 | 1.2:-61011568 | None:intergenic |
AATACTCGACATTGTTTGTA+TGG | 0.331774 | 1.2:+61005683 | MS.gene70800:CDS |
ATTGTACCGTCTCCCATTGA+TGG | 0.332636 | 1.2:+61010729 | MS.gene70800:CDS |
TGATATTTCTTCTTGTGAAT+AGG | 0.336331 | 1.2:-61006080 | None:intergenic |
ACCAGAATCTGGAGTTTCTT+GGG | 0.340136 | 1.2:-61012084 | None:intergenic |
GTATTTCTGTGCTTCTTTGT+CGG | 0.347913 | 1.2:+61006291 | MS.gene70800:CDS |
GTGGGATGAATGGATATCTT+TGG | 0.350893 | 1.2:+61010679 | MS.gene70800:CDS |
TGTCAGCCGTGCACATGATT+TGG | 0.352233 | 1.2:+61010476 | MS.gene70800:CDS |
AAACCATTTGATCAGCTTAT+GGG | 0.353481 | 1.2:+61009396 | MS.gene70800:CDS |
TGGAACTGTTCTTGATGCCT+TGG | 0.354057 | 1.2:-61011804 | None:intergenic |
CAAGTATCTGGAGCAATAAC+TGG | 0.354247 | 1.2:+61011504 | MS.gene70800:CDS |
CGGTTACAACGTAACATTCC+TGG | 0.354498 | 1.2:+61005650 | MS.gene70800:CDS |
CCCCAAGAAACTCCAGATTC+TGG | 0.357264 | 1.2:+61012083 | MS.gene70800:CDS |
ACTTGATTACTCTCGATATC+TGG | 0.357455 | 1.2:-61010756 | None:intergenic |
CATAACAATCAGCTGCAAAA+TGG | 0.358616 | 1.2:-61006010 | None:intergenic |
AACTCAATTCCGTTGGGATT+GGG | 0.365365 | 1.2:-61003481 | None:intergenic |
TCAGCTGGACCATCTGGATA+TGG | 0.366429 | 1.2:+61011648 | MS.gene70800:CDS |
TCTGATAGGTCACAAGTATC+TGG | 0.369819 | 1.2:+61011492 | MS.gene70800:intron |
TACAAACAATGTCGAGTATT+CGG | 0.370547 | 1.2:-61005680 | None:intergenic |
AGGCGTCAAGAAGCTGCATC+TGG | 0.374781 | 1.2:+61012005 | MS.gene70800:CDS |
TTCCAATCAGCTGGACCATC+TGG | 0.376364 | 1.2:+61011642 | MS.gene70800:CDS |
TTTCCTCAGCCTTTCCTCTT+CGG | 0.380180 | 1.2:-61005220 | None:intergenic |
GAGAACACTAACAGTTATTA+TGG | 0.386258 | 1.2:+61011684 | MS.gene70800:CDS |
TATTCACAAGAAGAAATATC+AGG | 0.390134 | 1.2:+61006082 | MS.gene70800:CDS |
TGCACTGCCTGACAAATATA+GGG | 0.393425 | 1.2:+61009521 | MS.gene70800:CDS |
CACTATTGATTACCAGAATC+TGG | 0.395476 | 1.2:-61012095 | None:intergenic |
ATCTCTAATGTTGGCATATG+AGG | 0.396928 | 1.2:-61006327 | None:intergenic |
AAAGTTTGGTGCATCAAGTC+TGG | 0.397453 | 1.2:+61007398 | MS.gene70800:CDS |
ATCCAGATGGTCCAGCTGAT+TGG | 0.402539 | 1.2:-61011644 | None:intergenic |
AAATGAATCAGCAACGTTCC+CGG | 0.404265 | 1.2:+61005075 | MS.gene70800:CDS |
AATGGTTTGAATGGCTCTCC+AGG | 0.409476 | 1.2:-61009381 | None:intergenic |
GAACTCAATTCCGTTGGGAT+TGG | 0.413495 | 1.2:-61003482 | None:intergenic |
ACCCGAGTTCTGCACAAATC+GGG | 0.418494 | 1.2:-61011925 | None:intergenic |
TCAATCTCAAAAGGAGGGTT+GGG | 0.418825 | 1.2:-61006243 | None:intergenic |
GTAGTACAAACCTTGCCATC+AGG | 0.423189 | 1.2:-61003553 | None:intergenic |
TGAGTTCGATAACTTGTACT+TGG | 0.423822 | 1.2:+61003498 | MS.gene70800:CDS |
CGGGGTTCTAAATTGGTTGT+TGG | 0.424536 | 1.2:-61011906 | None:intergenic |
GAAACGAGTTCGAGTTCAAC+AGG | 0.427322 | 1.2:+61006905 | MS.gene70800:CDS |
GACCCGAGTTCTGCACAAAT+CGG | 0.429056 | 1.2:-61011926 | None:intergenic |
ATTAGCAGTGGTGGGATGAA+TGG | 0.431329 | 1.2:+61010669 | MS.gene70800:intron |
TCAAACCTTCTCCTGTGCTT+TGG | 0.433255 | 1.2:+61011176 | MS.gene70800:CDS |
AGCTGATCAAATGGTTTGAA+TGG | 0.434925 | 1.2:-61009390 | None:intergenic |
TGAGGGAGAACATAAAATAA+TGG | 0.435875 | 1.2:+61005619 | MS.gene70800:CDS |
TGGTGTAGTGATACCCAAAA+AGG | 0.436441 | 1.2:+61010915 | MS.gene70800:CDS |
AAGCTTCTTTACCTTGCAAC+TGG | 0.436653 | 1.2:+61003735 | MS.gene70800:CDS |
GCATGAAGACAATGTTGGTC+GGG | 0.436656 | 1.2:+61011198 | MS.gene70800:CDS |
CTGTTTGTTGTATGACGAAC+TGG | 0.436692 | 1.2:-61011618 | None:intergenic |
ATACACCGTTATAATAATAC+TGG | 0.443894 | 1.2:-61008311 | None:intergenic |
ATTTGCCAGTATTATTATAA+CGG | 0.444027 | 1.2:+61008306 | MS.gene70800:CDS |
CCAGAAATTGGCGGCCTCGA+TGG | 0.445376 | 1.2:-61011882 | None:intergenic |
CAGGAATGTTACGTTGTAAC+CGG | 0.445921 | 1.2:-61005649 | None:intergenic |
ACATTTGAGTCTGAAGTCTC+AGG | 0.445971 | 1.2:-61005285 | None:intergenic |
CTTCATGAACAGCGGCAGAT+TGG | 0.447850 | 1.2:-61006869 | None:intergenic |
ACGGTGTATGCTCATGGAAA+TGG | 0.448433 | 1.2:+61008325 | MS.gene70800:CDS |
CAGCTGCAAAATGGCCAGCT+TGG | 0.448881 | 1.2:-61006001 | None:intergenic |
CAGGTCAAGTTAGGGGAGCC+TGG | 0.451540 | 1.2:+61007351 | MS.gene70800:intron |
TGGGATGAATGGATATCTTT+GGG | 0.458362 | 1.2:+61010680 | MS.gene70800:CDS |
GCAAAAGGAGCATAATGATA+CGG | 0.458852 | 1.2:-61009315 | None:intergenic |
ATCAAATCCCTATATTTGTC+AGG | 0.459480 | 1.2:-61009528 | None:intergenic |
GTCAATCTCAAAAGGAGGGT+TGG | 0.462823 | 1.2:-61006244 | None:intergenic |
GATTGAACCACAACCCTGCC+TGG | 0.464174 | 1.2:+61005373 | MS.gene70800:CDS |
TATCCAGTCTCATCTAATGC+TGG | 0.464794 | 1.2:+61011744 | MS.gene70800:CDS |
AATATGTGGAAGGCCTTTGT+TGG | 0.470088 | 1.2:+61008283 | MS.gene70800:CDS |
CAGTTCCAAAATGTGAAGAC+TGG | 0.471572 | 1.2:+61011819 | MS.gene70800:CDS |
GATATCTGGCAATCCATCAA+TGG | 0.473490 | 1.2:-61010742 | None:intergenic |
AAAACTTCATCATAAGTAGC+TGG | 0.480642 | 1.2:-61003660 | None:intergenic |
GGACAGGTAATTACTTTACC+TGG | 0.481240 | 1.2:+61005954 | MS.gene70800:intron |
GCAAGGTAAAGAAGCTTCCT+TGG | 0.481590 | 1.2:-61003729 | None:intergenic |
TTCACAGTTTCTTAACATCT+GGG | 0.482384 | 1.2:+61006185 | MS.gene70800:intron |
CGTTCAAAGTCAATCTCAAA+AGG | 0.482551 | 1.2:-61006252 | None:intergenic |
GTTAGGGGAGCCTGGATACA+AGG | 0.486533 | 1.2:+61007359 | MS.gene70800:CDS |
CTCCAGTACGTCCCCTAAAG+TGG | 0.486894 | 1.2:+61011949 | MS.gene70800:CDS |
ATAAAATAATGGAATACATC+CGG | 0.489514 | 1.2:+61005630 | MS.gene70800:CDS |
TAATACCTTTCCTTGTATCC+AGG | 0.490409 | 1.2:-61007369 | None:intergenic |
CAGTTCGTCATACAACAAAC+AGG | 0.491248 | 1.2:+61011619 | MS.gene70800:CDS |
AGTCTCATCTAATGCTGGGC+AGG | 0.491463 | 1.2:+61011749 | MS.gene70800:CDS |
TTGGGTATCACTACACCATC+CGG | 0.491979 | 1.2:-61010910 | None:intergenic |
CTGTAAATGGAATGTATCCT+AGG | 0.492380 | 1.2:+61011985 | MS.gene70800:CDS |
TTCCACTTTAGGGGACGTAC+TGG | 0.495067 | 1.2:-61011951 | None:intergenic |
ATAATGAAGAGATGAGAGCT+AGG | 0.496892 | 1.2:+61007049 | MS.gene70800:CDS |
CAGATTCTGGTAATCAATAG+TGG | 0.500005 | 1.2:+61012096 | MS.gene70800:CDS |
AGGTTCACTTCTCAATATTG+AGG | 0.500834 | 1.2:+61005843 | MS.gene70800:CDS |
ATATCTGGCAATCCATCAAT+GGG | 0.500898 | 1.2:-61010741 | None:intergenic |
TTGGGTTTAGAAGCGTCGAT+AGG | 0.504076 | 1.2:-61003463 | None:intergenic |
ACCTCTCTGATCTCTAATGT+TGG | 0.505160 | 1.2:-61006336 | None:intergenic |
TTGGTCGGGGACAGCAAGGA+AGG | 0.505479 | 1.2:+61011212 | MS.gene70800:CDS |
GGTTCACTTCTCAATATTGA+GGG | 0.508261 | 1.2:+61005844 | MS.gene70800:CDS |
GAAGCTTGAAGACACATTAA+CGG | 0.510764 | 1.2:+61009865 | MS.gene70800:CDS |
ACCCCGATTTGTGCAGAACT+CGG | 0.512326 | 1.2:+61011923 | MS.gene70800:CDS |
ACTGATGCATATATATAGAA+AGG | 0.512680 | 1.2:+61006569 | MS.gene70800:CDS |
GGTGGTTATCTTACTTATGC+GGG | 0.513220 | 1.2:+61006606 | MS.gene70800:CDS |
CTGAACCTTATCAGAAAATG+AGG | 0.514537 | 1.2:-61007103 | None:intergenic |
TCGACATTGTTTGTATGGAT+TGG | 0.515703 | 1.2:+61005688 | MS.gene70800:CDS |
TGGGTTTAGAAGCGTCGATA+GGG | 0.517050 | 1.2:-61003462 | None:intergenic |
GGGATGTGTCCATGTCTACA+AGG | 0.517479 | 1.2:-61010880 | None:intergenic |
ACAAACAGGTTCCAATCAGC+TGG | 0.518506 | 1.2:+61011633 | MS.gene70800:CDS |
TTCTTTATCTGCTTATGATG+AGG | 0.520588 | 1.2:-61012035 | None:intergenic |
GAGATGAGAGCTAGGGCAAG+AGG | 0.521283 | 1.2:+61007057 | MS.gene70800:CDS |
TGAATAGGGATTTCATCAGC+AGG | 0.521354 | 1.2:-61006065 | None:intergenic |
GGCGTCAAGAAGCTGCATCT+GGG | 0.521810 | 1.2:+61012006 | MS.gene70800:CDS |
TTATCGAACTCAATTCCGTT+GGG | 0.522931 | 1.2:-61003487 | None:intergenic |
TGGAAAACGATTTGCATGGC+AGG | 0.526103 | 1.2:+61009698 | MS.gene70800:CDS |
TTGCCATCAGGGTGAAAACA+AGG | 0.527426 | 1.2:-61003541 | None:intergenic |
TTATCTTACTTATGCGGGTG+AGG | 0.528053 | 1.2:+61006611 | MS.gene70800:CDS |
TAGAAAGGAATTCACTGCCA+TGG | 0.528597 | 1.2:+61006584 | MS.gene70800:CDS |
GATTCGAATGTTCCTGGTGA+GGG | 0.530248 | 1.2:+61005602 | MS.gene70800:CDS |
TAATACATCCCACGGAGTGT+TGG | 0.532494 | 1.2:+61011587 | MS.gene70800:CDS |
TCATCATAAGTAGCTGGTGC+TGG | 0.533007 | 1.2:-61003654 | None:intergenic |
GTTATCGAACTCAATTCCGT+TGG | 0.533750 | 1.2:-61003488 | None:intergenic |
GGAAGAACCTTGAAGCAGGC+AGG | 0.533838 | 1.2:-61009422 | None:intergenic |
CTCATCTAATGCTGGGCAGG+TGG | 0.534927 | 1.2:+61011752 | MS.gene70800:CDS |
CAAAAGGAGCATAATGATAC+GGG | 0.536914 | 1.2:-61009314 | None:intergenic |
ATTATAACGGTGTATGCTCA+TGG | 0.537434 | 1.2:+61008319 | MS.gene70800:CDS |
TCATGCCAAAGCACAGGAGA+AGG | 0.538530 | 1.2:-61011181 | None:intergenic |
ATTGGCGGCCTCGATGGTGC+AGG | 0.540550 | 1.2:-61011876 | None:intergenic |
GATGCAGCTTCTTGACGCCT+AGG | 0.540659 | 1.2:-61012002 | None:intergenic |
GTTGTTGGTCCAGAAATTGG+CGG | 0.541645 | 1.2:-61011891 | None:intergenic |
GGCTGCAAAAGATGCAGCTG+AGG | 0.541916 | 1.2:+61005106 | MS.gene70800:CDS |
AACCATTTGATCAGCTTATG+GGG | 0.542591 | 1.2:+61009397 | MS.gene70800:CDS |
ATCCAGTCTCATCTAATGCT+GGG | 0.544164 | 1.2:+61011745 | MS.gene70800:CDS |
GACTCAAATGTCATTACCCC+TGG | 0.547550 | 1.2:+61005297 | MS.gene70800:CDS |
TCTTTAAGATCAGAAGCAAA+AGG | 0.548870 | 1.2:-61009330 | None:intergenic |
GGCATGAAGACAATGTTGGT+CGG | 0.549089 | 1.2:+61011197 | MS.gene70800:CDS |
GGGTGGTTATCTTACTTATG+CGG | 0.549668 | 1.2:+61006605 | MS.gene70800:CDS |
CACCAATTAACGCAAATGCT+AGG | 0.550066 | 1.2:+61010562 | MS.gene70800:CDS |
CCCCGATTTGTGCAGAACTC+GGG | 0.552399 | 1.2:+61011924 | MS.gene70800:CDS |
TGATTCGAATGTTCCTGGTG+AGG | 0.556459 | 1.2:+61005601 | MS.gene70800:CDS |
CCAGAATCTGGAGTTTCTTG+GGG | 0.557442 | 1.2:-61012083 | None:intergenic |
TACAGGAAGCCGAAGAGGAA+AGG | 0.557457 | 1.2:+61005211 | MS.gene70800:intron |
ACAAAACACTTATCTTGTCC+AGG | 0.557626 | 1.2:-61005972 | None:intergenic |
TGCCCAGCATTAGATGAGAC+TGG | 0.557660 | 1.2:-61011747 | None:intergenic |
AGAAAGGAATTCACTGCCAT+GGG | 0.562929 | 1.2:+61006585 | MS.gene70800:CDS |
TTAGAACACAAGATAGGCCA+AGG | 0.563818 | 1.2:+61011787 | MS.gene70800:CDS |
TAGTACAAACCTTGCCATCA+GGG | 0.569197 | 1.2:-61003552 | None:intergenic |
AGTTCCAAAATGTGAAGACT+GGG | 0.571193 | 1.2:+61011820 | MS.gene70800:CDS |
CGAGTATTCGGATTGAAACC+AGG | 0.572208 | 1.2:-61005668 | None:intergenic |
ACTACGTCGGAGATCGAGAG+TGG | 0.575023 | 1.2:-61003418 | None:intergenic |
TGGACACATCCCAAAACCTC+CGG | 0.576106 | 1.2:+61010891 | MS.gene70800:CDS |
GGGTTTAGAAGCGTCGATAG+GGG | 0.576781 | 1.2:-61003461 | None:intergenic |
GAGTAATACTTCAAGAGCCA+CGG | 0.576974 | 1.2:+61007079 | MS.gene70800:CDS |
TAGAGGAAGAACCTTGAAGC+AGG | 0.581158 | 1.2:-61009426 | None:intergenic |
TTGTCTTCATGCCAAAGCAC+AGG | 0.582226 | 1.2:-61011187 | None:intergenic |
GCAATAACTGGATCTCAACT+AGG | 0.584210 | 1.2:+61011516 | MS.gene70800:CDS |
TCATCATAAGCAGATAAAGA+AGG | 0.585192 | 1.2:+61012037 | MS.gene70800:CDS |
AAGCCGAAGAGGAAAGGCTG+AGG | 0.585870 | 1.2:+61005217 | MS.gene70800:CDS |
CAGAAACTAAAGCTGAGGAC+GGG | 0.587267 | 1.2:+61006039 | MS.gene70800:CDS |
GATTGACTTTGAACGAGTAG+TGG | 0.588362 | 1.2:+61006260 | MS.gene70800:CDS |
GGGGACAGCAAGGAAGGGAA+AGG | 0.588657 | 1.2:+61011218 | MS.gene70800:CDS |
TCAAAGTCAATCTCAAAAGG+AGG | 0.589615 | 1.2:-61006249 | None:intergenic |
ATGGTTTGAATGGCTCTCCA+GGG | 0.592631 | 1.2:-61009380 | None:intergenic |
TAATGAAGAGATGAGAGCTA+GGG | 0.596480 | 1.2:+61007050 | MS.gene70800:CDS |
CACTTTAGGGGACGTACTGG+AGG | 0.599208 | 1.2:-61011948 | None:intergenic |
AAATGGAATAATACATCCCA+CGG | 0.600447 | 1.2:+61011579 | MS.gene70800:CDS |
CCAGAAACTAAAGCTGAGGA+CGG | 0.601449 | 1.2:+61006038 | MS.gene70800:CDS |
CTTTGGCATGAAGACAATGT+TGG | 0.602709 | 1.2:+61011193 | MS.gene70800:CDS |
AGAAATTGCTTGCTTCCACA+AGG | 0.603572 | 1.2:+61009843 | MS.gene70800:CDS |
CATGAAGACAATGTTGGTCG+GGG | 0.605014 | 1.2:+61011199 | MS.gene70800:CDS |
AGGAAAGAATTCGTTGAGGA+GGG | 0.605496 | 1.2:+61005237 | MS.gene70800:CDS |
GAGGTTGCTCCAACACTCCG+TGG | 0.605581 | 1.2:-61011596 | None:intergenic |
AGTAATACTTCAAGAGCCAC+GGG | 0.606371 | 1.2:+61007080 | MS.gene70800:CDS |
GAGGAAAGAATTCGTTGAGG+AGG | 0.608433 | 1.2:+61005236 | MS.gene70800:CDS |
TATCTCAATCCTTGTAGACA+TGG | 0.608911 | 1.2:+61010871 | MS.gene70800:CDS |
TGGTCGGGGACAGCAAGGAA+GGG | 0.610490 | 1.2:+61011213 | MS.gene70800:CDS |
AATGTTGGTCGGGGACAGCA+AGG | 0.612021 | 1.2:+61011208 | MS.gene70800:CDS |
TCACTTCTCAATATTGAGGG+AGG | 0.612602 | 1.2:+61005847 | MS.gene70800:CDS |
GGCAATCCATCAATGGGAGA+CGG | 0.612895 | 1.2:-61010735 | None:intergenic |
AAGCTTCCTTGGACGAACCA+AGG | 0.614170 | 1.2:-61003718 | None:intergenic |
TGCCATAAATTTAGTACCAG+GGG | 0.616503 | 1.2:-61005313 | None:intergenic |
CCCGAGTTCTGCACAAATCG+GGG | 0.617800 | 1.2:-61011924 | None:intergenic |
AGGTTGCTCCAACACTCCGT+GGG | 0.618962 | 1.2:-61011595 | None:intergenic |
AGTCATACATACCAGTTGCA+AGG | 0.619127 | 1.2:-61003746 | None:intergenic |
GGTAACGATCGGCGAGCCAG+CGG | 0.619212 | 1.2:-61003396 | None:intergenic |
GATCGAGAGTGGGTAACGAT+CGG | 0.619774 | 1.2:-61003407 | None:intergenic |
CAAAGTCAATCTCAAAAGGA+GGG | 0.624467 | 1.2:-61006248 | None:intergenic |
ATTTATGGCATCTCTGTCAG+TGG | 0.624598 | 1.2:+61005326 | MS.gene70800:CDS |
AAGGAATTCACTGCCATGGG+TGG | 0.626307 | 1.2:+61006588 | MS.gene70800:CDS |
GCGTCAAGAAGCTGCATCTG+GGG | 0.630800 | 1.2:+61012007 | MS.gene70800:CDS |
TGAAACACATCTTTCATGAG+TGG | 0.631778 | 1.2:-61010541 | None:intergenic |
ATGCCATAAATTTAGTACCA+GGG | 0.633893 | 1.2:-61005314 | None:intergenic |
AGCATTACAGGAAGCCGAAG+AGG | 0.635386 | 1.2:+61005206 | MS.gene70800:intron |
TATGTCTAGTCATTGCGCCA+TGG | 0.637403 | 1.2:-61011719 | None:intergenic |
GCTTTAGTATTCCACTTTAG+GGG | 0.639695 | 1.2:-61011960 | None:intergenic |
GATGCCATAAATTTAGTACC+AGG | 0.641743 | 1.2:-61005315 | None:intergenic |
TGCAGGACGAAGAACAGCGT+CGG | 0.642893 | 1.2:+61010427 | MS.gene70800:intron |
AATACTGGCAAATCCAACAA+AGG | 0.645916 | 1.2:-61008296 | None:intergenic |
CACATCCCAAAACCTCCGGA+TGG | 0.646836 | 1.2:+61010895 | MS.gene70800:CDS |
ACCATTTGATCAGCTTATGG+GGG | 0.647585 | 1.2:+61009398 | MS.gene70800:CDS |
TATTGAGAAGTGAACCTCGT+GGG | 0.648171 | 1.2:-61005837 | None:intergenic |
TGGTTTGAATGGCTCTCCAG+GGG | 0.653431 | 1.2:-61009379 | None:intergenic |
AACTTGTACTTGGATATGAA+CGG | 0.654472 | 1.2:+61003508 | MS.gene70800:CDS |
GGGAGCCTGGATACAAGGAA+AGG | 0.657433 | 1.2:+61007364 | MS.gene70800:CDS |
TGTGTCTTCAAGCTTCCTTG+TGG | 0.659538 | 1.2:-61009858 | None:intergenic |
GATTTGATCTTCATGAACAG+CGG | 0.659769 | 1.2:-61006877 | None:intergenic |
ATAAGTAAGATAACCACCCA+TGG | 0.660100 | 1.2:-61006601 | None:intergenic |
GTTTGGTGCATCAAGTCTGG+AGG | 0.670375 | 1.2:+61007401 | MS.gene70800:CDS |
TGCCATCAGGGTGAAAACAA+GGG | 0.672515 | 1.2:-61003540 | None:intergenic |
TGAATGGAAAACGATTTGCA+TGG | 0.674776 | 1.2:+61009694 | MS.gene70800:CDS |
TAAGCCAGAAACTAAAGCTG+AGG | 0.678336 | 1.2:+61006034 | MS.gene70800:CDS |
TTATCAGAAAATGAGGCCCG+TGG | 0.682170 | 1.2:-61007096 | None:intergenic |
GTGAAGCCAAATCATGTGCA+CGG | 0.683896 | 1.2:-61010482 | None:intergenic |
GGTATCACTACACCATCCGG+AGG | 0.693898 | 1.2:-61010907 | None:intergenic |
TATGGAGAACATAATCACCA+TGG | 0.694386 | 1.2:+61011702 | MS.gene70800:CDS |
AACAAGTTATCTCACCAGCA+GGG | 0.695359 | 1.2:-61009584 | None:intergenic |
TTTGTTGTATGACGAACTGG+AGG | 0.701848 | 1.2:-61011615 | None:intergenic |
GCTTCTAAACCCAATCCCAA+CGG | 0.705964 | 1.2:+61003472 | MS.gene70800:CDS |
CTACGTCGGAGATCGAGAGT+GGG | 0.712363 | 1.2:-61003417 | None:intergenic |
TGAATCAGCAACGTTCCCGG+CGG | 0.716241 | 1.2:+61005078 | MS.gene70800:CDS |
AATTGAGACCTGCACCATCG+AGG | 0.726329 | 1.2:+61011868 | MS.gene70800:CDS |
ATATTGAGAAGTGAACCTCG+TGG | 0.763937 | 1.2:-61005838 | None:intergenic |
TCCGACGTAGTCGAAGACGA+CGG | 0.766547 | 1.2:+61003430 | MS.gene70800:CDS |
GCTCTCTTTAGCTACCCACG+AGG | 0.777239 | 1.2:+61005823 | MS.gene70800:CDS |
GCTGAGGAAAGAATTCGTTG+AGG | 0.778697 | 1.2:+61005233 | MS.gene70800:CDS |
GCCGTCGTCTTCGACTACGT+CGG | 0.784088 | 1.2:-61003431 | None:intergenic |
GCCAACATTAGAGATCAGAG+AGG | 0.794461 | 1.2:+61006335 | MS.gene70800:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 61003376 | 61012115 | 61003376 | ID=MS.gene70800 |
chr1.2 | mRNA | 61003376 | 61012115 | 61003376 | ID=MS.gene70800.t1;Parent=MS.gene70800 |
chr1.2 | exon | 61003376 | 61003564 | 61003376 | ID=MS.gene70800.t1.exon1;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61003376 | 61003564 | 61003376 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61003654 | 61003756 | 61003654 | ID=MS.gene70800.t1.exon2;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61003654 | 61003756 | 61003654 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61005054 | 61005130 | 61005054 | ID=MS.gene70800.t1.exon3;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61005054 | 61005130 | 61005054 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61005216 | 61005407 | 61005216 | ID=MS.gene70800.t1.exon4;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61005216 | 61005407 | 61005216 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61005590 | 61005709 | 61005590 | ID=MS.gene70800.t1.exon5;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61005590 | 61005709 | 61005590 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61005806 | 61005868 | 61005806 | ID=MS.gene70800.t1.exon6;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61005806 | 61005868 | 61005806 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61005960 | 61006103 | 61005960 | ID=MS.gene70800.t1.exon7;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61005960 | 61006103 | 61005960 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61006192 | 61006356 | 61006192 | ID=MS.gene70800.t1.exon8;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61006192 | 61006356 | 61006192 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61006555 | 61006632 | 61006555 | ID=MS.gene70800.t1.exon9;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61006555 | 61006632 | 61006555 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61006840 | 61006926 | 61006840 | ID=MS.gene70800.t1.exon10;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61006840 | 61006926 | 61006840 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61007039 | 61007119 | 61007039 | ID=MS.gene70800.t1.exon11;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61007039 | 61007119 | 61007039 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61007354 | 61007449 | 61007354 | ID=MS.gene70800.t1.exon12;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61007354 | 61007449 | 61007354 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61008276 | 61008346 | 61008276 | ID=MS.gene70800.t1.exon13;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61008276 | 61008346 | 61008276 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61009308 | 61009436 | 61009308 | ID=MS.gene70800.t1.exon14;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61009308 | 61009436 | 61009308 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61009515 | 61009591 | 61009515 | ID=MS.gene70800.t1.exon15;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61009515 | 61009591 | 61009515 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61009679 | 61009719 | 61009679 | ID=MS.gene70800.t1.exon16;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61009679 | 61009719 | 61009679 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61009812 | 61009886 | 61009812 | ID=MS.gene70800.t1.exon17;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61009812 | 61009886 | 61009812 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61010432 | 61010583 | 61010432 | ID=MS.gene70800.t1.exon18;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61010432 | 61010583 | 61010432 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61010677 | 61010781 | 61010677 | ID=MS.gene70800.t1.exon19;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61010677 | 61010781 | 61010677 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61010861 | 61010936 | 61010861 | ID=MS.gene70800.t1.exon20;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61010861 | 61010936 | 61010861 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61011157 | 61011239 | 61011157 | ID=MS.gene70800.t1.exon21;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61011157 | 61011239 | 61011157 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
chr1.2 | exon | 61011500 | 61012115 | 61011500 | ID=MS.gene70800.t1.exon22;Parent=MS.gene70800.t1 |
chr1.2 | CDS | 61011500 | 61012115 | 61011500 | ID=cds.MS.gene70800.t1;Parent=MS.gene70800.t1 |
Gene Sequence |
Protein sequence |