Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70850.t1 | AET00180.1 | 93.1 | 612 | 33 | 2 | 26 | 637 | 1 | 603 | 0.00E+00 | 1101.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70850.t1 | O42936 | 23.4 | 512 | 304 | 24 | 55 | 526 | 4 | 467 | 3.6e-08 | 61.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70850.t1 | G7KCV9 | 93.1 | 612 | 33 | 2 | 26 | 637 | 1 | 603 | 0.0e+00 | 1101.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene70850 | 0.831136 | 1.98E-55 | -1.69E-46 |
| MS.gene049825 | MS.gene70850 | 0.855828 | 4.86E-62 | -1.69E-46 |
| MS.gene049873 | MS.gene70850 | 0.848553 | 5.69E-60 | -1.69E-46 |
| MS.gene050303 | MS.gene70850 | 0.806769 | 7.00E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene70850 | 0.811554 | 6.61E-51 | -1.69E-46 |
| MS.gene056642 | MS.gene70850 | 0.808866 | 2.51E-50 | -1.69E-46 |
| MS.gene05954 | MS.gene70850 | 0.817453 | 3.27E-52 | -1.69E-46 |
| MS.gene059935 | MS.gene70850 | 0.81727 | 3.60E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene70850 | 0.800168 | 1.64E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70850.t1 | MTR_5g089190 | 94.118 | 612 | 27 | 2 | 26 | 637 | 1 | 603 | 0.0 | 1093 |
| MS.gene70850.t1 | MTR_5g089190 | 96.939 | 490 | 15 | 0 | 148 | 637 | 1 | 490 | 0.0 | 962 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70850.t1 | AT5G12220 | 37.757 | 633 | 319 | 16 | 41 | 637 | 18 | 611 | 1.96e-103 | 327 |
| MS.gene70850.t1 | AT5G12220 | 36.809 | 633 | 314 | 18 | 41 | 637 | 18 | 600 | 4.04e-93 | 300 |
Find 145 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTTAAAATCTAATTAT+TGG | 0.155321 | 5.3:-71957640 | MS.gene70850:CDS |
| TGCTCGTATTTCCTCAATTA+AGG | 0.222153 | 5.3:-71958481 | MS.gene70850:intron |
| ACCTTATGGTAGGTGGGATT+TGG | 0.251666 | 5.3:-71955429 | MS.gene70850:CDS |
| GCATGGCTTGTTCGAATTCT+TGG | 0.266291 | 5.3:-71956105 | MS.gene70850:CDS |
| CACGCATTGATTCTTCGAAT+TGG | 0.270810 | 5.3:+71955842 | None:intergenic |
| GCGGCGGCTGCTGACGAAAA+AGG | 0.294854 | 5.3:-71958983 | MS.gene70850:CDS |
| CTCCCAAGAAACCGATTAAA+AGG | 0.301927 | 5.3:-71956780 | MS.gene70850:CDS |
| TTGGTTAAAATCTAATTATT+GGG | 0.303829 | 5.3:-71957639 | MS.gene70850:CDS |
| CCTCGGGTTGTTGGTTCATC+TGG | 0.313870 | 5.3:-71955682 | MS.gene70850:CDS |
| ATCTTTCTTCTTTGTTTGCA+TGG | 0.320771 | 5.3:-71956122 | MS.gene70850:CDS |
| AGGAGGTTCAGAAATAATTC+TGG | 0.323886 | 5.3:+71956565 | None:intergenic |
| ATGAGGGAGACTGAAGAATT+TGG | 0.335005 | 5.3:-71955514 | MS.gene70850:CDS |
| GGCATATTTGCTGCATTAGA+AGG | 0.335670 | 5.3:+71956075 | None:intergenic |
| GGCGCCGGCGGTGGTGGAAG+TGG | 0.345772 | 5.3:+71960532 | None:intergenic |
| ATCAGCCAAAACATTATCTA+TGG | 0.355267 | 5.3:+71956624 | None:intergenic |
| TTGCAGATAACCCAAGTATT+GGG | 0.356126 | 5.3:-71956182 | MS.gene70850:intron |
| CATCAGAAAGGAAAGGGAAT+TGG | 0.365554 | 5.3:-71955612 | MS.gene70850:CDS |
| TCCCACCATAGATAATGTTT+TGG | 0.377459 | 5.3:-71956629 | MS.gene70850:CDS |
| TCAACCATGGAACTAGTTTA+CGG | 0.378487 | 5.3:+71960386 | None:intergenic |
| ATTATTTCTGAACCTCCTTA+AGG | 0.380267 | 5.3:-71956560 | MS.gene70850:CDS |
| AACTAGTTCCATGGTTGAAC+TGG | 0.381866 | 5.3:-71960381 | MS.gene70850:CDS |
| ACGCATTGATTCTTCGAATT+GGG | 0.385867 | 5.3:+71955843 | None:intergenic |
| GGATCTTGAAATCTCTTCTT+CGG | 0.386804 | 5.3:-71956759 | MS.gene70850:CDS |
| GCGCCGGCGGTGGTGGAAGT+GGG | 0.389931 | 5.3:+71960533 | None:intergenic |
| GATACTTTCAGGCACTTGAT+TGG | 0.391649 | 5.3:-71957658 | MS.gene70850:intron |
| GTCCAATTGGTATGTTGCCT+CGG | 0.393620 | 5.3:-71955699 | MS.gene70850:CDS |
| GTTGCCGGCGCCGGCGGTGG+TGG | 0.399486 | 5.3:+71960526 | None:intergenic |
| AGAAGTTGTGTCTGTGCTGT+TGG | 0.402368 | 5.3:-71956716 | MS.gene70850:CDS |
| GGTATGTTGCCTCGGGTTGT+TGG | 0.406885 | 5.3:-71955691 | MS.gene70850:CDS |
| TTTGCAGATAACCCAAGTAT+TGG | 0.418355 | 5.3:-71956183 | MS.gene70850:intron |
| TCCTTAAGGAAGTTCTTCAT+AGG | 0.421724 | 5.3:-71956546 | MS.gene70850:CDS |
| GAGTATGCAATCCCAATACT+TGG | 0.426224 | 5.3:+71956171 | None:intergenic |
| TGTATTCCGTAGCGAGTTTG+AGG | 0.429264 | 5.3:-71959165 | MS.gene70850:intron |
| TCCTCCATCTGAAGGGGAAA+GGG | 0.430119 | 5.3:+71960484 | None:intergenic |
| TCTTCATAGGATTGAAGCTC+GGG | 0.439750 | 5.3:-71956533 | MS.gene70850:CDS |
| GTAGTTGCCGGCGCCGGCGG+TGG | 0.442513 | 5.3:+71960523 | None:intergenic |
| CAGAAAGTTCAATTGCTCTC+TGG | 0.449961 | 5.3:-71955934 | MS.gene70850:CDS |
| ACCCGAGGCAACATACCAAT+TGG | 0.455048 | 5.3:+71955697 | None:intergenic |
| TCCTATGAAGAACTTCCTTA+AGG | 0.455483 | 5.3:+71956545 | None:intergenic |
| TTAGCAATCTGTTTGAAAGT+TGG | 0.455524 | 5.3:-71957536 | MS.gene70850:CDS |
| ATGGAAGTGAAGGTAGTTGC+CGG | 0.457025 | 5.3:+71960511 | None:intergenic |
| CAACCATGGAACTAGTTTAC+GGG | 0.468394 | 5.3:+71960387 | None:intergenic |
| AGTTCATGCAAAACCCTCTT+CGG | 0.468762 | 5.3:+71956054 | None:intergenic |
| TTATAAAATCTGAGTATGAC+AGG | 0.471238 | 5.3:+71956595 | None:intergenic |
| ACTTCCACCACCGCCGGCGC+CGG | 0.472672 | 5.3:-71960530 | MS.gene70850:CDS |
| GGAAAATGAGTTGGGAGAAT+CGG | 0.477448 | 5.3:+71960324 | None:intergenic |
| ATCTGAAGGGGCATCTCGCT+TGG | 0.479158 | 5.3:+71955570 | None:intergenic |
| TCATGGAACCCATGTCCAAT+TGG | 0.480943 | 5.3:-71955712 | MS.gene70850:CDS |
| GAAGATATGAAGTGTGAAGA+AGG | 0.481420 | 5.3:-71956511 | MS.gene70850:intron |
| AAGAGCATCGGAAAATGAGT+TGG | 0.483916 | 5.3:+71960315 | None:intergenic |
| AGAGCATCGGAAAATGAGTT+GGG | 0.491230 | 5.3:+71960316 | None:intergenic |
| GCATTGTCTTCACCATGAAA+AGG | 0.491393 | 5.3:+71957596 | None:intergenic |
| AGAGGGGAAAGGATACCTTA+TGG | 0.493149 | 5.3:-71955443 | MS.gene70850:CDS |
| CGTCCCCTTTCCCCTTCAGA+TGG | 0.494319 | 5.3:-71960488 | MS.gene70850:CDS |
| ACTCAACTGTTAAGAAAATG+AGG | 0.498965 | 5.3:-71955531 | MS.gene70850:CDS |
| TTATCGATAACATGAAGAAC+GGG | 0.500813 | 5.3:+71955652 | None:intergenic |
| TATCCTTTCCCCTCTTCCGT+TGG | 0.503895 | 5.3:+71955451 | None:intergenic |
| GGATAAATCTCCAACGGAAG+AGG | 0.505062 | 5.3:-71955461 | MS.gene70850:CDS |
| TCCAAATCCCACCTACCATA+AGG | 0.505361 | 5.3:+71955428 | None:intergenic |
| ATCAAGCATCAGAAAGGAAA+GGG | 0.510699 | 5.3:-71955618 | MS.gene70850:CDS |
| GCAATCTGTTTGAAAGTTGG+CGG | 0.510725 | 5.3:-71957533 | MS.gene70850:CDS |
| AGACTGAAGAAACAGAGGTA+TGG | 0.512103 | 5.3:-71955747 | MS.gene70850:CDS |
| CCCCTTTCCCCTTCAGATGG+AGG | 0.514465 | 5.3:-71960485 | MS.gene70850:CDS |
| CGATGAATCTCCAATGGAAG+AGG | 0.516545 | 5.3:-71955482 | MS.gene70850:CDS |
| GTGAAGGTAGTTGCCGGCGC+CGG | 0.517661 | 5.3:+71960517 | None:intergenic |
| GGTCCATGCGCTGAATTTCA+AGG | 0.519070 | 5.3:+71960131 | None:intergenic |
| TCCAATTGGTATGTTGCCTC+GGG | 0.519322 | 5.3:-71955698 | MS.gene70850:CDS |
| AGAAACAGAGGTATGGGCTC+TGG | 0.519677 | 5.3:-71955740 | MS.gene70850:CDS |
| GGAGATTTATCCTCTTCCAT+TGG | 0.520251 | 5.3:+71955472 | None:intergenic |
| ATCACATCTCTGCGACAAGC+AGG | 0.521005 | 5.3:-71956010 | MS.gene70850:CDS |
| GTCTAGTACCTTACTTCTCA+AGG | 0.521133 | 5.3:-71957501 | MS.gene70850:CDS |
| AGCAGTGACATCAATGAGCT+CGG | 0.521937 | 5.3:+71960159 | None:intergenic |
| GATAAATCTCCAACGGAAGA+GGG | 0.524186 | 5.3:-71955460 | MS.gene70850:CDS |
| CAATCTGTTTGAAAGTTGGC+GGG | 0.528561 | 5.3:-71957532 | MS.gene70850:CDS |
| AAAAGGCCTTCCACGCATGC+TGG | 0.529221 | 5.3:-71958966 | MS.gene70850:CDS |
| GACTGAAGAAACAGAGGTAT+GGG | 0.529855 | 5.3:-71955746 | MS.gene70850:CDS |
| AAAGGGGACGATGGAAGTGA+AGG | 0.531326 | 5.3:+71960501 | None:intergenic |
| AGCCAAAACATTATCTATGG+TGG | 0.538633 | 5.3:+71956627 | None:intergenic |
| GTGGTTCGTCCTCCATCTGA+AGG | 0.540408 | 5.3:+71960476 | None:intergenic |
| TTCTTCATAGGATTGAAGCT+CGG | 0.542659 | 5.3:-71956534 | MS.gene70850:CDS |
| AATGAGCCATACCTTAATTG+AGG | 0.545010 | 5.3:+71958470 | None:intergenic |
| AAGGTAGTTGCCGGCGCCGG+CGG | 0.547187 | 5.3:+71960520 | None:intergenic |
| TATCAACCAGCATGCGTGGA+AGG | 0.547615 | 5.3:+71958960 | None:intergenic |
| CTGAAGGGGAAAGGGGACGA+TGG | 0.547626 | 5.3:+71960492 | None:intergenic |
| AACACAATCAAGCATCAGAA+AGG | 0.549443 | 5.3:-71955624 | MS.gene70850:CDS |
| GTCCTCCATCTGAAGGGGAA+AGG | 0.551011 | 5.3:+71960483 | None:intergenic |
| ATGGAGGACGAACCACCGTT+AGG | 0.551759 | 5.3:-71960469 | MS.gene70850:CDS |
| ATTTCGACGTGGCGAACTCG+AGG | 0.554041 | 5.3:-71960190 | MS.gene70850:CDS |
| TGGTTCGTCCTCCATCTGAA+GGG | 0.558776 | 5.3:+71960477 | None:intergenic |
| ATCCCCACTTCCACCACCGC+CGG | 0.560878 | 5.3:-71960536 | MS.gene70850:CDS |
| TATGGGCTCTGGCAAAGTCA+TGG | 0.561688 | 5.3:-71955729 | MS.gene70850:CDS |
| CGCCGGCGGTGGTGGAAGTG+GGG | 0.562202 | 5.3:+71960534 | None:intergenic |
| AGTATGCAATCCCAATACTT+GGG | 0.562491 | 5.3:+71956172 | None:intergenic |
| GTCAAACCTCAAACTCGCTA+CGG | 0.564541 | 5.3:+71959159 | None:intergenic |
| CGAATATCAACCAGCATGCG+TGG | 0.566509 | 5.3:+71958956 | None:intergenic |
| GCAGTGACATCAATGAGCTC+GGG | 0.568121 | 5.3:+71960160 | None:intergenic |
| AGCTACGCGTTTAAGAGCAT+CGG | 0.571819 | 5.3:+71960303 | None:intergenic |
| ATTCCCGTAAACTAGTTCCA+TGG | 0.572590 | 5.3:-71960390 | MS.gene70850:CDS |
| TCTCTGCGACAAGCAGGTCA+TGG | 0.573508 | 5.3:-71956004 | MS.gene70850:CDS |
| CTACCTTGAAATTCAGCGCA+TGG | 0.574595 | 5.3:-71960134 | MS.gene70850:CDS |
| AAAGGATACCTTATGGTAGG+TGG | 0.574733 | 5.3:-71955436 | MS.gene70850:CDS |
| GAGAAGTAAGGTACTAGACT+CGG | 0.574772 | 5.3:+71957505 | None:intergenic |
| AAAGGAATTGCTTTGCTCTG+AGG | 0.577350 | 5.3:+71957614 | None:intergenic |
| ATACGAGCAAGCTTGAGAGA+TGG | 0.578468 | 5.3:+71958495 | None:intergenic |
| AAAACGGGTGATGCTTCTGT+TGG | 0.580533 | 5.3:-71956652 | MS.gene70850:CDS |
| ATTAAACGATGAATCTCCAA+TGG | 0.581110 | 5.3:-71955488 | MS.gene70850:CDS |
| AGAACTTCGTTGAATCCTAA+CGG | 0.582261 | 5.3:+71960454 | None:intergenic |
| TCGAGTAGCTGAATATCTGA+AGG | 0.584840 | 5.3:+71955556 | None:intergenic |
| CACAACTTCTGAAGAGAAGG+AGG | 0.586748 | 5.3:+71956729 | None:intergenic |
| AGACACAACTTCTGAAGAGA+AGG | 0.587729 | 5.3:+71956726 | None:intergenic |
| TCTCCAACGGAAGAGGGGAA+AGG | 0.590522 | 5.3:-71955454 | MS.gene70850:CDS |
| GCCAAAACATTATCTATGGT+GGG | 0.590716 | 5.3:+71956628 | None:intergenic |
| TTTCAGAGGTATCACATCGT+GGG | 0.591314 | 5.3:-71958521 | MS.gene70850:intron |
| GTTATCGATAACATGAAGAA+CGG | 0.591533 | 5.3:+71955651 | None:intergenic |
| AATCAAGCATCAGAAAGGAA+AGG | 0.596186 | 5.3:-71955619 | MS.gene70850:CDS |
| CCTCCATCTGAAGGGGAAAG+GGG | 0.597136 | 5.3:+71960485 | None:intergenic |
| CGAGTAGCTGAATATCTGAA+GGG | 0.600315 | 5.3:+71955557 | None:intergenic |
| TGCAGCAAATATGCCGAAGA+GGG | 0.601191 | 5.3:-71956067 | MS.gene70850:CDS |
| AGAAGTAAGGTACTAGACTC+GGG | 0.605681 | 5.3:+71957506 | None:intergenic |
| TCTAGTACCTTACTTCTCAA+GGG | 0.609550 | 5.3:-71957500 | MS.gene70850:CDS |
| TATGAAGAACTTCCTTAAGG+AGG | 0.611863 | 5.3:+71956548 | None:intergenic |
| CATGGTTGAACTGGAACGAG+TGG | 0.613194 | 5.3:-71960372 | MS.gene70850:CDS |
| CAAAGAATGCTGAGAAGTCG+CGG | 0.623379 | 5.3:-71959027 | MS.gene70850:CDS |
| CTCAACTGTTAAGAAAATGA+GGG | 0.626067 | 5.3:-71955530 | MS.gene70850:CDS |
| GGAAGAGGATAAATCTCCAA+CGG | 0.627543 | 5.3:-71955467 | MS.gene70850:CDS |
| AAGGATACCTTATGGTAGGT+GGG | 0.631201 | 5.3:-71955435 | MS.gene70850:CDS |
| GGTTCGTCCTCCATCTGAAG+GGG | 0.632789 | 5.3:+71960478 | None:intergenic |
| ATGCAGCAAATATGCCGAAG+AGG | 0.638862 | 5.3:-71956068 | MS.gene70850:CDS |
| GGGAAAGGATACCTTATGGT+AGG | 0.643384 | 5.3:-71955439 | MS.gene70850:CDS |
| CACTCGTTCCAGTTCAACCA+TGG | 0.643729 | 5.3:+71960373 | None:intergenic |
| GGCAACATACCAATTGGACA+TGG | 0.644160 | 5.3:+71955703 | None:intergenic |
| CCAGATGAACCAACAACCCG+AGG | 0.644239 | 5.3:+71955682 | None:intergenic |
| TGGGATTTGGAAGAAAGTAA+CGG | 0.650098 | 5.3:-71955416 | MS.gene70850:CDS |
| ATAAATCTCCAACGGAAGAG+GGG | 0.652995 | 5.3:-71955459 | MS.gene70850:CDS |
| TTGTGAGACTGAAGAAACAG+AGG | 0.663335 | 5.3:-71955752 | MS.gene70850:CDS |
| GAGTAGCTGAATATCTGAAG+GGG | 0.666409 | 5.3:+71955558 | None:intergenic |
| CGATAACATGAAGAACGGGA+AGG | 0.671753 | 5.3:+71955656 | None:intergenic |
| AGACAGGATCTATCAAACGA+TGG | 0.672737 | 5.3:-71959217 | MS.gene70850:CDS |
| ATTTCAGAGGTATCACATCG+TGG | 0.672973 | 5.3:-71958522 | MS.gene70850:intron |
| ATGCTGGTTGATATTCGTCA+CGG | 0.680659 | 5.3:-71958950 | MS.gene70850:intron |
| GAAAGAATATACGACAATAG+CGG | 0.687272 | 5.3:-71959002 | MS.gene70850:CDS |
| GCAACATACCAATTGGACAT+GGG | 0.692578 | 5.3:+71955704 | None:intergenic |
| AGAATATACGACAATAGCGG+CGG | 0.710334 | 5.3:-71958999 | MS.gene70850:CDS |
| GATTTGGAAGAAAGTAACGG+AGG | 0.731702 | 5.3:-71955413 | MS.gene70850:CDS |
| ACTTCGTTGAATCCTAACGG+TGG | 0.746330 | 5.3:+71960457 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAGAAATTAATTAAATTG+AGG | + | chr5.3:71958935-71958954 | None:intergenic | 10.0% |
| !! | GAAACAAATTATAATTAAAT+AGG | + | chr5.3:71958151-71958170 | None:intergenic | 10.0% |
| !!! | AAATTTTATTTTATTTAGAC+AGG | - | chr5.3:71956680-71956699 | MS.gene70850:CDS | 10.0% |
| !! | ATGTTTATATTCTAATATCA+TGG | + | chr5.3:71958031-71958050 | None:intergenic | 15.0% |
| !! | ATTGGTTAAAATCTAATTAT+TGG | - | chr5.3:71958273-71958292 | MS.gene70850:intron | 15.0% |
| !! | TATAAAAAATCTCAAGTATT+GGG | - | chr5.3:71958958-71958977 | MS.gene70850:CDS | 15.0% |
| !! | TTATAAAAAATCTCAAGTAT+TGG | - | chr5.3:71958957-71958976 | MS.gene70850:CDS | 15.0% |
| !! | TTGGTTAAAATCTAATTATT+GGG | - | chr5.3:71958274-71958293 | MS.gene70850:intron | 15.0% |
| !!! | AAATTTTTATGATTTCATGT+TGG | + | chr5.3:71959625-71959644 | None:intergenic | 15.0% |
| !!! | ATCAGTAATAATTAATGTTT+TGG | - | chr5.3:71959076-71959095 | MS.gene70850:intron | 15.0% |
| !!! | CAAAATTTACCTATTTTTTT+AGG | - | chr5.3:71956371-71956390 | MS.gene70850:intron | 15.0% |
| !!! | GATAAGAGTTTTTAATAATA+AGG | - | chr5.3:71957052-71957071 | MS.gene70850:intron | 15.0% |
| !!! | TCAGTAATAATTAATGTTTT+GGG | - | chr5.3:71959077-71959096 | MS.gene70850:intron | 15.0% |
| !!! | TCATTTTCTTAAATTACTAT+TGG | + | chr5.3:71955871-71955890 | None:intergenic | 15.0% |
| !!! | TTAACTAGTGTTTATTTTAT+TGG | - | chr5.3:71958050-71958069 | MS.gene70850:intron | 15.0% |
| !!! | TTCAACATTAAAGTATTAAA+CGG | + | chr5.3:71958601-71958620 | None:intergenic | 15.0% |
| !! | AAAGAATAAAGTGATCTAAA+GGG | + | chr5.3:71958518-71958537 | None:intergenic | 20.0% |
| !! | AAGCAACAAAACTAAATTTA+TGG | + | chr5.3:71957208-71957227 | None:intergenic | 20.0% |
| !! | AGTGTTTATATTAAGATCTT+GGG | + | chr5.3:71958176-71958195 | None:intergenic | 20.0% |
| !! | TAAAGAATAAAGTGATCTAA+AGG | + | chr5.3:71958519-71958538 | None:intergenic | 20.0% |
| !! | TTAAGACATCATTCTTTAAA+AGG | + | chr5.3:71957728-71957747 | None:intergenic | 20.0% |
| !! | TTGAAGAATAATTTCATGTT+TGG | - | chr5.3:71955980-71955999 | MS.gene70850:CDS | 20.0% |
| !! | TTTGACAAATTTATCCAAAA+AGG | + | chr5.3:71957004-71957023 | None:intergenic | 20.0% |
| !!! | ACATGCCAAAATTTTAAATT+GGG | + | chr5.3:71958626-71958645 | None:intergenic | 20.0% |
| !!! | AGTGTTTATTTTATTGGAAT+TGG | - | chr5.3:71958056-71958075 | MS.gene70850:intron | 20.0% |
| !!! | CTTTTTTTATCAGTATAGAT+AGG | - | chr5.3:71957990-71958009 | MS.gene70850:intron | 20.0% |
| !!! | GTTATTTAATATTTTAGAGC+TGG | - | chr5.3:71958980-71958999 | MS.gene70850:CDS | 20.0% |
| !!! | TGGGTTAACTATATTTTTTT+TGG | - | chr5.3:71957957-71957976 | MS.gene70850:intron | 20.0% |
| ! | AAAACCTCATTTGATATCAT+AGG | - | chr5.3:71957802-71957821 | MS.gene70850:intron | 25.0% |
| ! | AACATGATTAAAGATGCTAA+TGG | + | chr5.3:71957162-71957181 | None:intergenic | 25.0% |
| ! | AAGTTACAACATGAAGAAAA+AGG | + | chr5.3:71958460-71958479 | None:intergenic | 25.0% |
| ! | CAATAAGTAAAACAAAAAGC+AGG | + | chr5.3:71957366-71957385 | None:intergenic | 25.0% |
| ! | GAGTGTTTATATTAAGATCT+TGG | + | chr5.3:71958177-71958196 | None:intergenic | 25.0% |
| ! | GTATAAGTTATAACTTCCTT+CGG | - | chr5.3:71957098-71957117 | MS.gene70850:intron | 25.0% |
| ! | GTTACGAATACCTAAAAAAT+GGG | + | chr5.3:71955806-71955825 | None:intergenic | 25.0% |
| ! | GTTGTTGTACCTAAAAAAAT+AGG | + | chr5.3:71956383-71956402 | None:intergenic | 25.0% |
| ! | TAGAAGAAAGGTAATGAAAA+AGG | + | chr5.3:71956782-71956801 | None:intergenic | 25.0% |
| ! | TGTTACGAATACCTAAAAAA+TGG | + | chr5.3:71955807-71955826 | None:intergenic | 25.0% |
| ! | TTATAAAATCTGAGTATGAC+AGG | + | chr5.3:71959321-71959340 | None:intergenic | 25.0% |
| ! | TTCTTAAATTACTATTGGTG+TGG | + | chr5.3:71955866-71955885 | None:intergenic | 25.0% |
| !! | AAAAAATCTTAGAGCCTTTT+TGG | - | chr5.3:71956987-71957006 | MS.gene70850:intron | 25.0% |
| !! | ATCATTCTTTAAAAGGTCAA+AGG | + | chr5.3:71957721-71957740 | None:intergenic | 25.0% |
| !! | ATGTTTTCTCTTTGAATTCT+CGG | - | chr5.3:71958888-71958907 | MS.gene70850:intron | 25.0% |
| !! | ATTATCACAGGCTAAATTTT+GGG | - | chr5.3:71958661-71958680 | MS.gene70850:intron | 25.0% |
| !! | CACATGCCAAAATTTTAAAT+TGG | + | chr5.3:71958627-71958646 | None:intergenic | 25.0% |
| !! | GACAATCTTTTTACTTCTTT+GGG | - | chr5.3:71957490-71957509 | MS.gene70850:intron | 25.0% |
| !! | GATTTCAAGATCCTTTTAAT+CGG | + | chr5.3:71959147-71959166 | None:intergenic | 25.0% |
| !! | TATTATCACAGGCTAAATTT+TGG | - | chr5.3:71958660-71958679 | MS.gene70850:intron | 25.0% |
| !! | TCATTCTTTAAAAGGTCAAA+GGG | + | chr5.3:71957720-71957739 | None:intergenic | 25.0% |
| !! | TGACAATCTTTTTACTTCTT+TGG | - | chr5.3:71957489-71957508 | MS.gene70850:intron | 25.0% |
| !!! | CAACAACTTACACATTTTTT+AGG | - | chr5.3:71955956-71955975 | MS.gene70850:CDS | 25.0% |
| !!! | CAATTTAAAATTTTGGCATG+TGG | - | chr5.3:71958625-71958644 | MS.gene70850:intron | 25.0% |
| !!! | GAAAGCCCAATTTAAAATTT+TGG | - | chr5.3:71958618-71958637 | MS.gene70850:intron | 25.0% |
| !!! | GTCAAACTGTTTTTTATGTA+AGG | - | chr5.3:71956069-71956088 | MS.gene70850:CDS | 25.0% |
| AAACAGTTTATAAGCGCTTA+TGG | - | chr5.3:71956141-71956160 | MS.gene70850:CDS | 30.0% | |
| AAACTAAATATGAGACCTTG+TGG | + | chr5.3:71957137-71957156 | None:intergenic | 30.0% | |
| AAAGAGATGAAGAAGAAAAC+AGG | + | chr5.3:71958738-71958757 | None:intergenic | 30.0% | |
| AAGAAAGGTAATGAAAAAGG+AGG | + | chr5.3:71956779-71956798 | None:intergenic | 30.0% | |
| AATAAGCCGAAAACAACTTA+TGG | - | chr5.3:71956579-71956598 | MS.gene70850:CDS | 30.0% | |
| ACCATGAATAAAGTTGTGTT+TGG | - | chr5.3:71956407-71956426 | MS.gene70850:intron | 30.0% | |
| ACTCAACTGTTAAGAAAATG+AGG | - | chr5.3:71960382-71960401 | MS.gene70850:CDS | 30.0% | |
| AGCAGAAACATTACACAATT+AGG | + | chr5.3:71955697-71955716 | None:intergenic | 30.0% | |
| ATCAGCCAAAACATTATCTA+TGG | + | chr5.3:71959292-71959311 | None:intergenic | 30.0% | |
| ATTAAACGATGAATCTCCAA+TGG | - | chr5.3:71960425-71960444 | MS.gene70850:CDS | 30.0% | |
| CTAACAACGTAACCAAATTA+TGG | + | chr5.3:71957549-71957568 | None:intergenic | 30.0% | |
| CTAGAAAACTAGTAGAAGAA+AGG | + | chr5.3:71956794-71956813 | None:intergenic | 30.0% | |
| CTCAACTGTTAAGAAAATGA+GGG | - | chr5.3:71960383-71960402 | MS.gene70850:CDS | 30.0% | |
| CTCAGAGTTCAAAAAGAAAA+CGG | - | chr5.3:71959245-71959264 | MS.gene70850:intron | 30.0% | |
| GAAAGAATATACGACAATAG+CGG | - | chr5.3:71956911-71956930 | MS.gene70850:intron | 30.0% | |
| GAGAAGAGGATATTCTATAA+AGG | + | chr5.3:71957778-71957797 | None:intergenic | 30.0% | |
| GCAGAAACATTACACAATTA+GGG | + | chr5.3:71955696-71955715 | None:intergenic | 30.0% | |
| GCTTAAGCAGTTATCATATA+AGG | - | chr5.3:71956456-71956475 | MS.gene70850:intron | 30.0% | |
| GCTTATGGTATATGTGTTTA+GGG | - | chr5.3:71956156-71956175 | MS.gene70850:CDS | 30.0% | |
| GTATTTCCTCAATTAAGGTA+TGG | - | chr5.3:71957437-71957456 | MS.gene70850:intron | 30.0% | |
| GTTAGCATTTAGGAAAGAAT+TGG | - | chr5.3:71957564-71957583 | MS.gene70850:CDS | 30.0% | |
| GTTATCGATAACATGAAGAA+CGG | + | chr5.3:71960265-71960284 | None:intergenic | 30.0% | |
| TCAAATCGCTTAATTGTTGT+GGG | - | chr5.3:71959472-71959491 | MS.gene70850:intron | 30.0% | |
| TCAGAGTTCAAAAAGAAAAC+GGG | - | chr5.3:71959246-71959265 | MS.gene70850:intron | 30.0% | |
| TCCAAACACAACTTTATTCA+TGG | + | chr5.3:71956411-71956430 | None:intergenic | 30.0% | |
| TGAGTGTATATATGTTTGTC+TGG | - | chr5.3:71957629-71957648 | MS.gene70850:CDS | 30.0% | |
| TGGAAAAAATTATATGCCGA+AGG | + | chr5.3:71957117-71957136 | None:intergenic | 30.0% | |
| TGTGTAAGTTGTTGAAAAAG+TGG | + | chr5.3:71955950-71955969 | None:intergenic | 30.0% | |
| TTAGCAATCTGTTTGAAAGT+TGG | - | chr5.3:71958377-71958396 | MS.gene70850:intron | 30.0% | |
| TTATAGAATAAGACGAAGCT+AGG | + | chr5.3:71957249-71957268 | None:intergenic | 30.0% | |
| TTATCGATAACATGAAGAAC+GGG | + | chr5.3:71960264-71960283 | None:intergenic | 30.0% | |
| TTCAAATCGCTTAATTGTTG+TGG | - | chr5.3:71959471-71959490 | MS.gene70850:intron | 30.0% | |
| TTGAAAATACTTGGTATGGA+AGG | + | chr5.3:71958203-71958222 | None:intergenic | 30.0% | |
| ! | AGTTTGTTTGGAAGAACTTA+CGG | + | chr5.3:71956623-71956642 | None:intergenic | 30.0% |
| ! | ATAGTCTTACTGATACTTTC+AGG | - | chr5.3:71958244-71958263 | MS.gene70850:intron | 30.0% |
| ! | ATCTTTCTTCTTTGTTTGCA+TGG | - | chr5.3:71959791-71959810 | MS.gene70850:intron | 30.0% |
| ! | ATGATGATTTTGAATCGTCT+TGG | + | chr5.3:71955491-71955510 | None:intergenic | 30.0% |
| ! | ATTTGAAACTTCCGATGTAA+AGG | + | chr5.3:71959458-71959477 | None:intergenic | 30.0% |
| ! | GATATCAAATGAGGTTTTCA+TGG | + | chr5.3:71957800-71957819 | None:intergenic | 30.0% |
| ! | GTTTTATATGCCTTTTTGCA+GGG | - | chr5.3:71958772-71958791 | MS.gene70850:intron | 30.0% |
| ! | TAAGCAATGATGAGTTTGTT+TGG | + | chr5.3:71956635-71956654 | None:intergenic | 30.0% |
| ! | TGAGTTGAAAATACTTGGTA+TGG | + | chr5.3:71958207-71958226 | None:intergenic | 30.0% |
| ! | TGTTTTATATGCCTTTTTGC+AGG | - | chr5.3:71958771-71958790 | MS.gene70850:intron | 30.0% |
| ! | TTATCACAGGCTAAATTTTG+GGG | - | chr5.3:71958662-71958681 | MS.gene70850:intron | 30.0% |
| ! | TTGAGGAAAAAGTATAATCC+TGG | + | chr5.3:71958918-71958937 | None:intergenic | 30.0% |
| ! | TTGTTATTGTAAACTGGAGA+CGG | - | chr5.3:71956269-71956288 | MS.gene70850:intron | 30.0% |
| !! | ATATGTTTTTCGATAACGCA+TGG | - | chr5.3:71958101-71958120 | MS.gene70850:intron | 30.0% |
| !! | ATCCTTTTAATCGGTTTCTT+GGG | + | chr5.3:71959138-71959157 | None:intergenic | 30.0% |
| !! | ATTATTTCTGAACCTCCTTA+AGG | - | chr5.3:71959353-71959372 | MS.gene70850:intron | 30.0% |
| !! | TATGATTTCATGTTGGCTTA+AGG | + | chr5.3:71959618-71959637 | None:intergenic | 30.0% |
| !! | TATGTTTTTCGATAACGCAT+GGG | - | chr5.3:71958102-71958121 | MS.gene70850:intron | 30.0% |
| !!! | GGCATATAATTTTTTCCACA+AGG | - | chr5.3:71957119-71957138 | MS.gene70850:intron | 30.0% |
| !!! | TAGATAATGTTTTGGCTGAT+TGG | - | chr5.3:71959292-71959311 | MS.gene70850:intron | 30.0% |
| AAATAGTCTCGCTAGTGTTT+AGG | - | chr5.3:71956330-71956349 | MS.gene70850:intron | 35.0% | |
| AACACAATCAAGCATCAGAA+AGG | - | chr5.3:71960289-71960308 | MS.gene70850:CDS | 35.0% | |
| AACAGCATTCACAATCCTTT+CGG | + | chr5.3:71956865-71956884 | None:intergenic | 35.0% | |
| AAGAATGATGTCTTAACTCC+TGG | - | chr5.3:71957732-71957751 | MS.gene70850:intron | 35.0% | |
| AATAGGTAACCACATGAATG+TGG | + | chr5.3:71958134-71958153 | None:intergenic | 35.0% | |
| AATCAAGCATCAGAAAGGAA+AGG | - | chr5.3:71960294-71960313 | MS.gene70850:CDS | 35.0% | |
| AATGAGCCATACCTTAATTG+AGG | + | chr5.3:71957446-71957465 | None:intergenic | 35.0% | |
| ACAACTTTGATACACAAGCT+AGG | + | chr5.3:71957914-71957933 | None:intergenic | 35.0% | |
| ACCACATTTCTCCTTTACAT+CGG | - | chr5.3:71959444-71959463 | MS.gene70850:intron | 35.0% | |
| AGAACTTCGTTGAATCCTAA+CGG | + | chr5.3:71955462-71955481 | None:intergenic | 35.0% | |
| AGCCAAAACATTATCTATGG+TGG | + | chr5.3:71959289-71959308 | None:intergenic | 35.0% | |
| AGGAGGTTCAGAAATAATTC+TGG | + | chr5.3:71959351-71959370 | None:intergenic | 35.0% | |
| AGGTCCTATGATATCAAATG+AGG | + | chr5.3:71957809-71957828 | None:intergenic | 35.0% | |
| AGTATGCAATCCCAATACTT+GGG | + | chr5.3:71959744-71959763 | None:intergenic | 35.0% | |
| AGTTCTTTGGCTATTATCAC+AGG | - | chr5.3:71958649-71958668 | MS.gene70850:intron | 35.0% | |
| ATATGAAGTGTGAAGAAGGT+AGG | - | chr5.3:71959406-71959425 | MS.gene70850:intron | 35.0% | |
| ATCAAGCATCAGAAAGGAAA+GGG | - | chr5.3:71960295-71960314 | MS.gene70850:CDS | 35.0% | |
| ATCATATAACAAGAAGCTCC+AGG | + | chr5.3:71956119-71956138 | None:intergenic | 35.0% | |
| ATGATAACTGCTTAAGCTAC+AGG | + | chr5.3:71956453-71956472 | None:intergenic | 35.0% | |
| ATGTAAAGGAGAAATGTGGT+CGG | + | chr5.3:71959444-71959463 | None:intergenic | 35.0% | |
| CATTTGATATCATAGGACCT+TGG | - | chr5.3:71957809-71957828 | MS.gene70850:intron | 35.0% | |
| CGCTTATGGTATATGTGTTT+AGG | - | chr5.3:71956155-71956174 | MS.gene70850:CDS | 35.0% | |
| GAAGATATGAAGTGTGAAGA+AGG | - | chr5.3:71959402-71959421 | MS.gene70850:intron | 35.0% | |
| GCCAAAACATTATCTATGGT+GGG | + | chr5.3:71959288-71959307 | None:intergenic | 35.0% | |
| GGATCTTGAAATCTCTTCTT+CGG | - | chr5.3:71959154-71959173 | MS.gene70850:intron | 35.0% | |
| GTAAGTTGTTGAAAAAGTGG+TGG | + | chr5.3:71955947-71955966 | None:intergenic | 35.0% | |
| GTGTATGTAATCACATGTGT+CGG | - | chr5.3:71955902-71955921 | MS.gene70850:CDS | 35.0% | |
| TAGAGTTCTATCATGCTTAG+AGG | - | chr5.3:71958842-71958861 | MS.gene70850:intron | 35.0% | |
| TATGAAGAACTTCCTTAAGG+AGG | + | chr5.3:71959368-71959387 | None:intergenic | 35.0% | |
| TCCTATGAAGAACTTCCTTA+AGG | + | chr5.3:71959371-71959390 | None:intergenic | 35.0% | |
| TCCTTAAGGAAGTTCTTCAT+AGG | - | chr5.3:71959367-71959386 | MS.gene70850:intron | 35.0% | |
| TCTAGTACCTTACTTCTCAA+GGG | - | chr5.3:71958413-71958432 | MS.gene70850:intron | 35.0% | |
| TGATTTATAGCCCTGCAAAA+AGG | + | chr5.3:71958785-71958804 | None:intergenic | 35.0% | |
| TGCATGATGCTATGCTAATT+GGG | - | chr5.3:71957292-71957311 | MS.gene70850:intron | 35.0% | |
| TGCTCGTATTTCCTCAATTA+AGG | - | chr5.3:71957432-71957451 | MS.gene70850:intron | 35.0% | |
| TGGGATTTGGAAGAAAGTAA+CGG | - | chr5.3:71960497-71960516 | MS.gene70850:CDS | 35.0% | |
| TGGTTACGTTGTTAGCATTT+AGG | - | chr5.3:71957554-71957573 | MS.gene70850:CDS | 35.0% | |
| TGTTAGAAGAGTCATCAACA+AGG | + | chr5.3:71956820-71956839 | None:intergenic | 35.0% | |
| TTCCATCCTTTAATTCAGCT+GGG | - | chr5.3:71959643-71959662 | MS.gene70850:intron | 35.0% | |
| TTCTTCATAGGATTGAAGCT+CGG | - | chr5.3:71959379-71959398 | MS.gene70850:intron | 35.0% | |
| TTGCAGATAACCCAAGTATT+GGG | - | chr5.3:71959731-71959750 | MS.gene70850:intron | 35.0% | |
| TTGCATGATGCTATGCTAAT+TGG | - | chr5.3:71957291-71957310 | MS.gene70850:intron | 35.0% | |
| TTTACAATAACAAGCTCTCC+AGG | + | chr5.3:71956262-71956281 | None:intergenic | 35.0% | |
| TTTCCATCCTTTAATTCAGC+TGG | - | chr5.3:71959642-71959661 | MS.gene70850:intron | 35.0% | |
| TTTGCAGATAACCCAAGTAT+TGG | - | chr5.3:71959730-71959749 | MS.gene70850:intron | 35.0% | |
| ! | AGCAAAGCAATTCCTTTTCA+TGG | - | chr5.3:71958305-71958324 | MS.gene70850:intron | 35.0% |
| ! | AGCAGTGAGTTGAAAATACT+TGG | + | chr5.3:71958212-71958231 | None:intergenic | 35.0% |
| ! | AGGAAAAAGTATAATCCTGG+AGG | + | chr5.3:71958915-71958934 | None:intergenic | 35.0% |
| ! | CAGATGATCTTCTCTAAAAG+TGG | + | chr5.3:71957680-71957699 | None:intergenic | 35.0% |
| ! | CGTTTTCTTTTTGAACTCTG+AGG | + | chr5.3:71959247-71959266 | None:intergenic | 35.0% |
| ! | CTATTCTTTAGAAGCTATCC+TGG | - | chr5.3:71956098-71956117 | MS.gene70850:CDS | 35.0% |
| ! | CTTTTACTAGTCCAAAGAGA+GGG | - | chr5.3:71958708-71958727 | MS.gene70850:intron | 35.0% |
| ! | TCAACCATGGAACTAGTTTA+CGG | + | chr5.3:71955530-71955549 | None:intergenic | 35.0% |
| ! | TCCCACCATAGATAATGTTT+TGG | - | chr5.3:71959284-71959303 | MS.gene70850:intron | 35.0% |
| ! | TTCTCTAAAAGTGGCTTATC+AGG | + | chr5.3:71957671-71957690 | None:intergenic | 35.0% |
| ! | TTTTCACAAGTTAACCTCGA+AGG | - | chr5.3:71956548-71956567 | MS.gene70850:CDS | 35.0% |
| !! | ACACGTCCATAAGTTGTTTT+CGG | + | chr5.3:71956588-71956607 | None:intergenic | 35.0% |
| !! | ACGCATTGATTCTTCGAATT+GGG | + | chr5.3:71960073-71960092 | None:intergenic | 35.0% |
| !! | ACTTATTGCTGCTATTTCAG+AGG | - | chr5.3:71957378-71957397 | MS.gene70850:intron | 35.0% |
| !! | CTTATTTTCAAAAGCCTTCG+AGG | + | chr5.3:71956565-71956584 | None:intergenic | 35.0% |
| !! | GAGAGCTTGTTATTGTAAAC+TGG | - | chr5.3:71956263-71956282 | MS.gene70850:intron | 35.0% |
| !! | GATCCTTTTAATCGGTTTCT+TGG | + | chr5.3:71959139-71959158 | None:intergenic | 35.0% |
| !! | TATTTTTGCAGAAGCTATCC+TGG | - | chr5.3:71956241-71956260 | MS.gene70850:intron | 35.0% |
| !! | TTTTGAAGAAGTGATGCAAC+TGG | + | chr5.3:71956356-71956375 | None:intergenic | 35.0% |
| !!! | TGCTGATGGGAATGTTTTTT+TGG | - | chr5.3:71959584-71959603 | MS.gene70850:intron | 35.0% |
| !!! | TTGTTGCTTTTGTAGCTAGA+AGG | - | chr5.3:71957219-71957238 | MS.gene70850:intron | 35.0% |
| AAAGGAATTGCTTTGCTCTG+AGG | + | chr5.3:71958302-71958321 | None:intergenic | 40.0% | |
| AAAGGATACCTTATGGTAGG+TGG | - | chr5.3:71960477-71960496 | MS.gene70850:CDS | 40.0% | |
| AACTAGTTCCATGGTTGAAC+TGG | - | chr5.3:71955532-71955551 | MS.gene70850:CDS | 40.0% | |
| AAGAGAAGCAGATGTTACCA+AGG | + | chr5.3:71957829-71957848 | None:intergenic | 40.0% | |
| AAGGATACCTTATGGTAGGT+GGG | - | chr5.3:71960478-71960497 | MS.gene70850:CDS | 40.0% | |
| ACAGCATTCACAATCCTTTC+GGG | + | chr5.3:71956864-71956883 | None:intergenic | 40.0% | |
| AGAATATACGACAATAGCGG+CGG | - | chr5.3:71956914-71956933 | MS.gene70850:intron | 40.0% | |
| AGACAGGATCTATCAAACGA+TGG | - | chr5.3:71956696-71956715 | MS.gene70850:CDS | 40.0% | |
| AGACTGAAGAAACAGAGGTA+TGG | - | chr5.3:71960166-71960185 | MS.gene70850:CDS | 40.0% | |
| AGTTCATGCAAAACCCTCTT+CGG | + | chr5.3:71959862-71959881 | None:intergenic | 40.0% | |
| ATAAATCTCCAACGGAAGAG+GGG | - | chr5.3:71960454-71960473 | MS.gene70850:CDS | 40.0% | |
| ATCGTATCTTAGATCCCATC+TGG | - | chr5.3:71958548-71958567 | MS.gene70850:intron | 40.0% | |
| ATCTTAGATCCCATCTGGTT+TGG | - | chr5.3:71958553-71958572 | MS.gene70850:intron | 40.0% | |
| ATGAGGGAGACTGAAGAATT+TGG | - | chr5.3:71960399-71960418 | MS.gene70850:CDS | 40.0% | |
| ATTCCCGTAAACTAGTTCCA+TGG | - | chr5.3:71955523-71955542 | MS.gene70850:CDS | 40.0% | |
| CAATCTGTTTGAAAGTTGGC+GGG | - | chr5.3:71958381-71958400 | MS.gene70850:intron | 40.0% | |
| CACATTGAAAATGCCTCTGA+TGG | + | chr5.3:71957852-71957871 | None:intergenic | 40.0% | |
| CAGAAAGTTCAATTGCTCTC+TGG | - | chr5.3:71959979-71959998 | MS.gene70850:intron | 40.0% | |
| CAGACAAGTGTGTAAGACAT+TGG | + | chr5.3:71958486-71958505 | None:intergenic | 40.0% | |
| CATCAGAAAGGAAAGGGAAT+TGG | - | chr5.3:71960301-71960320 | MS.gene70850:CDS | 40.0% | |
| CGAGTAGCTGAATATCTGAA+GGG | + | chr5.3:71960359-71960378 | None:intergenic | 40.0% | |
| CGTACTGCACAAAGCTTATT+GGG | - | chr5.3:71957938-71957957 | MS.gene70850:intron | 40.0% | |
| CTAACACAGCATACTCAAGT+TGG | + | chr5.3:71957875-71957894 | None:intergenic | 40.0% | |
| CTCCCAAGAAACCGATTAAA+AGG | - | chr5.3:71959133-71959152 | MS.gene70850:intron | 40.0% | |
| GAGTAGCTGAATATCTGAAG+GGG | + | chr5.3:71960358-71960377 | None:intergenic | 40.0% | |
| GAGTATGCAATCCCAATACT+TGG | + | chr5.3:71959745-71959764 | None:intergenic | 40.0% | |
| GAGTATGCTGTGTTAGAAAG+AGG | - | chr5.3:71957879-71957898 | MS.gene70850:intron | 40.0% | |
| GATAAATCTCCAACGGAAGA+GGG | - | chr5.3:71960453-71960472 | MS.gene70850:CDS | 40.0% | |
| GATACTTTCAGGCACTTGAT+TGG | - | chr5.3:71958255-71958274 | MS.gene70850:intron | 40.0% | |
| GATTTGGAAGAAAGTAACGG+AGG | - | chr5.3:71960500-71960519 | MS.gene70850:CDS | 40.0% | |
| GCAACATACCAATTGGACAT+GGG | + | chr5.3:71960212-71960231 | None:intergenic | 40.0% | |
| GCAATCTGTTTGAAAGTTGG+CGG | - | chr5.3:71958380-71958399 | MS.gene70850:intron | 40.0% | |
| GCATTGTCTTCACCATGAAA+AGG | + | chr5.3:71958320-71958339 | None:intergenic | 40.0% | |
| GGAAGAGGATAAATCTCCAA+CGG | - | chr5.3:71960446-71960465 | MS.gene70850:CDS | 40.0% | |
| GGAGATTTATCCTCTTCCAT+TGG | + | chr5.3:71960444-71960463 | None:intergenic | 40.0% | |
| GTCTAGTACCTTACTTCTCA+AGG | - | chr5.3:71958412-71958431 | MS.gene70850:intron | 40.0% | |
| TCCATCCTTTAATTCAGCTG+GGG | - | chr5.3:71959644-71959663 | MS.gene70850:intron | 40.0% | |
| TCCGATGTAAAGGAGAAATG+TGG | + | chr5.3:71959448-71959467 | None:intergenic | 40.0% | |
| TCGAGTAGCTGAATATCTGA+AGG | + | chr5.3:71960360-71960379 | None:intergenic | 40.0% | |
| TCTTCATAGGATTGAAGCTC+GGG | - | chr5.3:71959380-71959399 | MS.gene70850:intron | 40.0% | |
| TGTGTGTGTGGTCCATAATT+TGG | - | chr5.3:71957534-71957553 | MS.gene70850:CDS | 40.0% | |
| TTGTGAGACTGAAGAAACAG+AGG | - | chr5.3:71960161-71960180 | MS.gene70850:CDS | 40.0% | |
| TTGTGTTAAACACAGACCTC+AGG | + | chr5.3:71957604-71957623 | None:intergenic | 40.0% | |
| TTTGCAGGGCTATAAATCAC+AGG | - | chr5.3:71958786-71958805 | MS.gene70850:intron | 40.0% | |
| TTTGGCATGTGGAAGTTCTT+TGG | - | chr5.3:71958636-71958655 | MS.gene70850:intron | 40.0% | |
| ! | ACGTTTTCCCTTGAGAAGTA+AGG | + | chr5.3:71958423-71958442 | None:intergenic | 40.0% |
| ! | AGAAGTAAGGTACTAGACTC+GGG | + | chr5.3:71958410-71958429 | None:intergenic | 40.0% |
| ! | AGACACAACTTCTGAAGAGA+AGG | + | chr5.3:71959190-71959209 | None:intergenic | 40.0% |
| ! | AGAGCTGGTCTACAAGATAT+TGG | - | chr5.3:71958995-71959014 | MS.gene70850:CDS | 40.0% |
| ! | ATGAGGTTTTCATGGAGAAG+AGG | + | chr5.3:71957792-71957811 | None:intergenic | 40.0% |
| ! | ATGCTGGTTGATATTCGTCA+CGG | - | chr5.3:71956963-71956982 | MS.gene70850:intron | 40.0% |
| ! | CAACCATGGAACTAGTTTAC+GGG | + | chr5.3:71955529-71955548 | None:intergenic | 40.0% |
| ! | CCAATAAGCTTTGTGCAGTA+CGG | + | chr5.3:71957940-71957959 | None:intergenic | 40.0% |
| ! | GACTGAAGAAACAGAGGTAT+GGG | - | chr5.3:71960167-71960186 | MS.gene70850:CDS | 40.0% |
| ! | GAGAAGTAAGGTACTAGACT+CGG | + | chr5.3:71958411-71958430 | None:intergenic | 40.0% |
| ! | GCTTTTACTAGTCCAAAGAG+AGG | - | chr5.3:71958707-71958726 | MS.gene70850:intron | 40.0% |
| ! | GGAAAATGAGTTGGGAGAAT+CGG | + | chr5.3:71955592-71955611 | None:intergenic | 40.0% |
| ! | GGAACAAATTTTCTCTCCTG+AGG | - | chr5.3:71957585-71957604 | MS.gene70850:CDS | 40.0% |
| ! | GGCATATTTGCTGCATTAGA+AGG | + | chr5.3:71959841-71959860 | None:intergenic | 40.0% |
| ! | TTTTGTACTGCACTGCTGAT+GGG | - | chr5.3:71959571-71959590 | MS.gene70850:intron | 40.0% |
| ! | TTTTTGTACTGCACTGCTGA+TGG | - | chr5.3:71959570-71959589 | MS.gene70850:intron | 40.0% |
| !! | AAAAACCGTGGAAGTGTCTA+GGG | + | chr5.3:71959555-71959574 | None:intergenic | 40.0% |
| !! | AAGAGCATCGGAAAATGAGT+TGG | + | chr5.3:71955601-71955620 | None:intergenic | 40.0% |
| !! | AGAGCATCGGAAAATGAGTT+GGG | + | chr5.3:71955600-71955619 | None:intergenic | 40.0% |
| !! | ATTTCAGAGGTATCACATCG+TGG | - | chr5.3:71957391-71957410 | MS.gene70850:intron | 40.0% |
| !! | CACGCATTGATTCTTCGAAT+TGG | + | chr5.3:71960074-71960093 | None:intergenic | 40.0% |
| !! | CTGTGTTAGAAAGAGGCATT+TGG | - | chr5.3:71957886-71957905 | MS.gene70850:intron | 40.0% |
| !! | TTTCAGAGGTATCACATCGT+GGG | - | chr5.3:71957392-71957411 | MS.gene70850:intron | 40.0% |
| AAAACGGGTGATGCTTCTGT+TGG | - | chr5.3:71959261-71959280 | MS.gene70850:intron | 45.0% | |
| ACCCCAGCTGAATTAAAGGA+TGG | + | chr5.3:71959648-71959667 | None:intergenic | 45.0% | |
| ACCTTATGGTAGGTGGGATT+TGG | - | chr5.3:71960484-71960503 | MS.gene70850:CDS | 45.0% | |
| ACTTCGTTGAATCCTAACGG+TGG | + | chr5.3:71955459-71955478 | None:intergenic | 45.0% | |
| AGAAGTTGTGTCTGTGCTGT+TGG | - | chr5.3:71959197-71959216 | MS.gene70850:CDS | 45.0% | |
| AGAGGGGAAAGGATACCTTA+TGG | - | chr5.3:71960470-71960489 | MS.gene70850:CDS | 45.0% | |
| AGCAGTGACATCAATGAGCT+CGG | + | chr5.3:71955757-71955776 | None:intergenic | 45.0% | |
| ATACGAGCAAGCTTGAGAGA+TGG | + | chr5.3:71957421-71957440 | None:intergenic | 45.0% | |
| ATCTGCTTCTCTTCCATCAG+AGG | - | chr5.3:71957836-71957855 | MS.gene70850:intron | 45.0% | |
| ATGCAGCAAATATGCCGAAG+AGG | - | chr5.3:71959845-71959864 | MS.gene70850:intron | 45.0% | |
| ATGGAAGTGAAGGTAGTTGC+CGG | + | chr5.3:71955405-71955424 | None:intergenic | 45.0% | |
| CAAACCAGACCAAACCAGAT+GGG | + | chr5.3:71958565-71958584 | None:intergenic | 45.0% | |
| CAAAGAATGCTGAGAAGTCG+CGG | - | chr5.3:71956886-71956905 | MS.gene70850:intron | 45.0% | |
| CCGTACTGCACAAAGCTTAT+TGG | - | chr5.3:71957937-71957956 | MS.gene70850:intron | 45.0% | |
| CGATAACATGAAGAACGGGA+AGG | + | chr5.3:71960260-71960279 | None:intergenic | 45.0% | |
| CGATGAATCTCCAATGGAAG+AGG | - | chr5.3:71960431-71960450 | MS.gene70850:CDS | 45.0% | |
| CTACCTTGAAATTCAGCGCA+TGG | - | chr5.3:71955779-71955798 | MS.gene70850:CDS | 45.0% | |
| GCTTAATTGTTGTGGGTGCT+TGG | - | chr5.3:71959479-71959498 | MS.gene70850:intron | 45.0% | |
| GGATAAATCTCCAACGGAAG+AGG | - | chr5.3:71960452-71960471 | MS.gene70850:CDS | 45.0% | |
| GGCAACATACCAATTGGACA+TGG | + | chr5.3:71960213-71960232 | None:intergenic | 45.0% | |
| GGGAAAGGATACCTTATGGT+AGG | - | chr5.3:71960474-71960493 | MS.gene70850:CDS | 45.0% | |
| GTCAAACCTCAAACTCGCTA+CGG | + | chr5.3:71956757-71956776 | None:intergenic | 45.0% | |
| GTCCAATTGGTATGTTGCCT+CGG | - | chr5.3:71960214-71960233 | MS.gene70850:intron | 45.0% | |
| GTTCTATCATGCTTAGAGGC+TGG | - | chr5.3:71958846-71958865 | MS.gene70850:intron | 45.0% | |
| TAAGCAAGTGTGTGTGTGTG+TGG | - | chr5.3:71957522-71957541 | MS.gene70850:CDS | 45.0% | |
| TACTAGTCCAAAGAGAGGGT+AGG | - | chr5.3:71958712-71958731 | MS.gene70850:intron | 45.0% | |
| TCATGGAACCCATGTCCAAT+TGG | - | chr5.3:71960201-71960220 | MS.gene70850:intron | 45.0% | |
| TCCAAATCCCACCTACCATA+AGG | + | chr5.3:71960488-71960507 | None:intergenic | 45.0% | |
| TCCAATTGGTATGTTGCCTC+GGG | - | chr5.3:71960215-71960234 | MS.gene70850:intron | 45.0% | |
| TGCAGCAAATATGCCGAAGA+GGG | - | chr5.3:71959846-71959865 | MS.gene70850:intron | 45.0% | |
| TGTAAACTGGAGACGGCTTA+TGG | - | chr5.3:71956276-71956295 | MS.gene70850:intron | 45.0% | |
| TGTATTCCGTAGCGAGTTTG+AGG | - | chr5.3:71956748-71956767 | MS.gene70850:CDS | 45.0% | |
| TTAAGCCCTAGACACTTCCA+CGG | - | chr5.3:71959547-71959566 | MS.gene70850:intron | 45.0% | |
| ! | AGCTACGCGTTTAAGAGCAT+CGG | + | chr5.3:71955613-71955632 | None:intergenic | 45.0% |
| ! | CACAACTTCTGAAGAGAAGG+AGG | + | chr5.3:71959187-71959206 | None:intergenic | 45.0% |
| !! | CAAAAACCGTGGAAGTGTCT+AGG | + | chr5.3:71959556-71959575 | None:intergenic | 45.0% |
| !! | CTGCTTTTCAGATTTCGACG+TGG | - | chr5.3:71955712-71955731 | MS.gene70850:CDS | 45.0% |
| !! | GCATGGCTTGTTCGAATTCT+TGG | - | chr5.3:71959808-71959827 | MS.gene70850:intron | 45.0% |
| !!! | AGCGCATGGACCCATTTTTT+AGG | - | chr5.3:71955793-71955812 | MS.gene70850:CDS | 45.0% |
| AAACAGGCCTACCCTCTCTT+TGG | + | chr5.3:71958722-71958741 | None:intergenic | 50.0% | |
| AAAGGGGACGATGGAAGTGA+AGG | + | chr5.3:71955415-71955434 | None:intergenic | 50.0% | |
| ACCCGAGGCAACATACCAAT+TGG | + | chr5.3:71960219-71960238 | None:intergenic | 50.0% | |
| AGGATATACCACAGCCACCA+AGG | + | chr5.3:71957758-71957777 | None:intergenic | 50.0% | |
| ATCACATCTCTGCGACAAGC+AGG | - | chr5.3:71959903-71959922 | MS.gene70850:intron | 50.0% | |
| CACTCGTTCCAGTTCAACCA+TGG | + | chr5.3:71955543-71955562 | None:intergenic | 50.0% | |
| CATGGTTGAACTGGAACGAG+TGG | - | chr5.3:71955541-71955560 | MS.gene70850:CDS | 50.0% | |
| CCAAACCAGACCAAACCAGA+TGG | + | chr5.3:71958566-71958585 | None:intergenic | 50.0% | |
| CGAATATCAACCAGCATGCG+TGG | + | chr5.3:71956960-71956979 | None:intergenic | 50.0% | |
| CTTTGAATTCTCGGTCCTCC+AGG | - | chr5.3:71958897-71958916 | MS.gene70850:intron | 50.0% | |
| GATGTCTTAACTCCTGGCCT+TGG | - | chr5.3:71957738-71957757 | MS.gene70850:intron | 50.0% | |
| GCAGTGACATCAATGAGCTC+GGG | + | chr5.3:71955756-71955775 | None:intergenic | 50.0% | |
| GCAGTGCAGTACAAAAACCG+TGG | + | chr5.3:71959567-71959586 | None:intergenic | 50.0% | |
| GGGAATCAGCCACATTCATG+TGG | - | chr5.3:71958122-71958141 | MS.gene70850:intron | 50.0% | |
| GGTATTCGTAACACCGACAC+CGG | - | chr5.3:71955814-71955833 | MS.gene70850:CDS | 50.0% | |
| GGTCCATGCGCTGAATTTCA+AGG | + | chr5.3:71955785-71955804 | None:intergenic | 50.0% | |
| GTGCTGTCTTTCTTCCCGAA+AGG | - | chr5.3:71956847-71956866 | MS.gene70850:intron | 50.0% | |
| TATCAACCAGCATGCGTGGA+AGG | + | chr5.3:71956956-71956975 | None:intergenic | 50.0% | |
| TATCCTTTCCCCTCTTCCGT+TGG | + | chr5.3:71960465-71960484 | None:intergenic | 50.0% | |
| TCCTCCATCTGAAGGGGAAA+GGG | + | chr5.3:71955432-71955451 | None:intergenic | 50.0% | |
| TGGTTCGTCCTCCATCTGAA+GGG | + | chr5.3:71955439-71955458 | None:intergenic | 50.0% | |
| ! | AGAAACAGAGGTATGGGCTC+TGG | - | chr5.3:71960173-71960192 | MS.gene70850:CDS | 50.0% |
| ! | TATGGGCTCTGGCAAAGTCA+TGG | - | chr5.3:71960184-71960203 | MS.gene70850:CDS | 50.0% |
| !! | AGATCCCATCTGGTTTGGTC+TGG | - | chr5.3:71958558-71958577 | MS.gene70850:intron | 50.0% |
| !! | CCATCTGGTTTGGTCTGGTT+TGG | - | chr5.3:71958563-71958582 | MS.gene70850:intron | 50.0% |
| AAAAGGCCTTCCACGCATGC+TGG | - | chr5.3:71956947-71956966 | MS.gene70850:intron | 55.0% | |
| ACGTGTGTCAGTGTCGTGAC+CGG | + | chr5.3:71955836-71955855 | None:intergenic | 55.0% | |
| ATGGAGGACGAACCACCGTT+AGG | - | chr5.3:71955444-71955463 | MS.gene70850:CDS | 55.0% | |
| ATTTCGACGTGGCGAACTCG+AGG | - | chr5.3:71955723-71955742 | MS.gene70850:CDS | 55.0% | |
| CCAGATGAACCAACAACCCG+AGG | + | chr5.3:71960234-71960253 | None:intergenic | 55.0% | |
| CCTCCATCTGAAGGGGAAAG+GGG | + | chr5.3:71955431-71955450 | None:intergenic | 55.0% | |
| GGTTCGTCCTCCATCTGAAG+GGG | + | chr5.3:71955438-71955457 | None:intergenic | 55.0% | |
| GTCCTCCATCTGAAGGGGAA+AGG | + | chr5.3:71955433-71955452 | None:intergenic | 55.0% | |
| GTGGTTCGTCCTCCATCTGA+AGG | + | chr5.3:71955440-71955459 | None:intergenic | 55.0% | |
| TCTCCAACGGAAGAGGGGAA+AGG | - | chr5.3:71960459-71960478 | MS.gene70850:CDS | 55.0% | |
| TCTCTGCGACAAGCAGGTCA+TGG | - | chr5.3:71959909-71959928 | MS.gene70850:intron | 55.0% | |
| ! | GGTATGTTGCCTCGGGTTGT+TGG | - | chr5.3:71960222-71960241 | MS.gene70850:intron | 55.0% |
| !! | ATCTGAAGGGGCATCTCGCT+TGG | + | chr5.3:71960346-71960365 | None:intergenic | 55.0% |
| !! | CCTCGGGTTGTTGGTTCATC+TGG | - | chr5.3:71960231-71960250 | MS.gene70850:intron | 55.0% |
| !! | GTCTTAACTCCTGGCCTTGG+TGG | - | chr5.3:71957741-71957760 | MS.gene70850:intron | 55.0% |
| ATACCACAGCCACCAAGGCC+AGG | + | chr5.3:71957753-71957772 | None:intergenic | 60.0% | |
| CCCCTTTCCCCTTCAGATGG+AGG | - | chr5.3:71955428-71955447 | MS.gene70850:CDS | 60.0% | |
| CGTCCCCTTTCCCCTTCAGA+TGG | - | chr5.3:71955425-71955444 | MS.gene70850:CDS | 60.0% | |
| CTGAAGGGGAAAGGGGACGA+TGG | + | chr5.3:71955424-71955443 | None:intergenic | 60.0% | |
| GTCAGTGTCGTGACCGGTGT+CGG | + | chr5.3:71955830-71955849 | None:intergenic | 60.0% | |
| ATCCCCACTTCCACCACCGC+CGG | - | chr5.3:71955377-71955396 | MS.gene70850:CDS | 65.0% | |
| GCGGCGGCTGCTGACGAAAA+AGG | - | chr5.3:71956930-71956949 | MS.gene70850:intron | 65.0% | |
| GTGAAGGTAGTTGCCGGCGC+CGG | + | chr5.3:71955399-71955418 | None:intergenic | 65.0% | |
| !! | ACTCCTGGCCTTGGTGGCTG+TGG | - | chr5.3:71957747-71957766 | MS.gene70850:intron | 65.0% |
| ! | AAGGTAGTTGCCGGCGCCGG+CGG | + | chr5.3:71955396-71955415 | None:intergenic | 70.0% |
| ACTTCCACCACCGCCGGCGC+CGG | - | chr5.3:71955383-71955402 | MS.gene70850:CDS | 75.0% | |
| !! | CGCCGGCGGTGGTGGAAGTG+GGG | + | chr5.3:71955382-71955401 | None:intergenic | 75.0% |
| !! | GCGCCGGCGGTGGTGGAAGT+GGG | + | chr5.3:71955383-71955402 | None:intergenic | 75.0% |
| !!! | GGCGCCGGCGGTGGTGGAAG+TGG | + | chr5.3:71955384-71955403 | None:intergenic | 80.0% |
| !!! | GTAGTTGCCGGCGCCGGCGG+TGG | + | chr5.3:71955393-71955412 | None:intergenic | 80.0% |
| !!! | GTTGCCGGCGCCGGCGGTGG+TGG | + | chr5.3:71955390-71955409 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 71955369 | 71960566 | 71955369 | ID=MS.gene70850 |
| chr5.3 | mRNA | 71955369 | 71960566 | 71955369 | ID=MS.gene70850.t1;Parent=MS.gene70850 |
| chr5.3 | exon | 71960285 | 71960566 | 71960285 | ID=MS.gene70850.t1.exon1;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71960285 | 71960566 | 71960285 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71960121 | 71960212 | 71960121 | ID=MS.gene70850.t1.exon2;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71960121 | 71960212 | 71960121 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71959166 | 71959237 | 71959166 | ID=MS.gene70850.t1.exon3;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71959166 | 71959237 | 71959166 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71958951 | 71959066 | 71958951 | ID=MS.gene70850.t1.exon4;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71958951 | 71959066 | 71958951 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71958482 | 71958537 | 71958482 | ID=MS.gene70850.t1.exon5;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71958482 | 71958537 | 71958482 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71957495 | 71957669 | 71957495 | ID=MS.gene70850.t1.exon6;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71957495 | 71957669 | 71957495 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71956512 | 71956802 | 71956512 | ID=MS.gene70850.t1.exon7;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71956512 | 71956802 | 71956512 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| chr5.3 | exon | 71955369 | 71956198 | 71955369 | ID=MS.gene70850.t1.exon8;Parent=MS.gene70850.t1 |
| chr5.3 | CDS | 71955369 | 71956198 | 71955369 | ID=cds.MS.gene70850.t1;Parent=MS.gene70850.t1 |
| Gene Sequence |
| Protein sequence |
