Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70957.t1 | RHN67194.1 | 91.6 | 439 | 36 | 1 | 1 | 438 | 258 | 696 | 1.30E-219 | 772.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70957.t1 | Q9MAU5 | 47.9 | 403 | 204 | 2 | 26 | 425 | 26 | 425 | 1.7e-106 | 387.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70957.t1 | A0A072UVU6 | 91.6 | 439 | 36 | 1 | 1 | 438 | 1 | 439 | 9.4e-220 | 772.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene70957 | 0.808205 | 3.47E-50 | -1.69E-46 |
| MS.gene051800 | MS.gene70957 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene70957 | 0.807311 | 5.38E-50 | -1.69E-46 |
| MS.gene052333 | MS.gene70957 | 0.814722 | 1.33E-51 | -1.69E-46 |
| MS.gene052677 | MS.gene70957 | 0.802206 | 6.26E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene70957 | -0.81358 | 2.38E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene70957 | 0.801453 | 8.94E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene70957 | 0.814007 | 1.92E-51 | -1.69E-46 |
| MS.gene056174 | MS.gene70957 | 0.811762 | 5.95E-51 | -1.69E-46 |
| MS.gene060011 | MS.gene70957 | 0.850525 | 1.61E-60 | -1.69E-46 |
| MS.gene060905 | MS.gene70957 | 0.801253 | 9.82E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70957.t1 | MTR_3g054360 | 91.572 | 439 | 36 | 1 | 1 | 438 | 1 | 439 | 0.0 | 801 |
| MS.gene70957.t1 | MTR_5g093980 | 60.849 | 424 | 163 | 2 | 17 | 438 | 15 | 437 | 0.0 | 523 |
| MS.gene70957.t1 | MTR_5g084690 | 47.132 | 401 | 210 | 2 | 27 | 425 | 30 | 430 | 8.87e-124 | 370 |
| MS.gene70957.t1 | MTR_3g054370 | 86.885 | 122 | 16 | 0 | 16 | 137 | 16 | 137 | 1.31e-65 | 208 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70957.t1 | AT1G04970 | 47.891 | 403 | 204 | 2 | 26 | 425 | 26 | 425 | 5.57e-135 | 399 |
| MS.gene70957.t1 | AT3G20270 | 42.404 | 441 | 244 | 5 | 1 | 438 | 39 | 472 | 1.46e-113 | 345 |
| MS.gene70957.t1 | AT3G20270 | 42.404 | 441 | 244 | 5 | 1 | 438 | 39 | 472 | 1.46e-113 | 345 |
| MS.gene70957.t1 | AT3G20270 | 42.404 | 441 | 244 | 5 | 1 | 438 | 39 | 472 | 1.46e-113 | 345 |
| MS.gene70957.t1 | AT3G20270 | 42.623 | 427 | 236 | 4 | 1 | 425 | 39 | 458 | 3.82e-113 | 342 |
| MS.gene70957.t1 | AT3G20270 | 42.404 | 441 | 244 | 5 | 1 | 438 | 246 | 679 | 3.39e-110 | 342 |
| MS.gene70957.t1 | AT3G20270 | 42.404 | 441 | 244 | 5 | 1 | 438 | 246 | 679 | 3.39e-110 | 342 |
| MS.gene70957.t1 | AT1G04970 | 50.512 | 293 | 139 | 2 | 136 | 425 | 10 | 299 | 2.69e-99 | 303 |
| MS.gene70957.t1 | AT1G04970 | 50.512 | 293 | 139 | 2 | 136 | 425 | 10 | 299 | 2.69e-99 | 303 |
Find 92 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATTGCAATTGCAATTAA+TGG | 0.139963 | 3.3:-44545129 | MS.gene70957:CDS |
| TGCTCCACCATCCAACTTTA+TGG | 0.190402 | 3.3:+44546241 | None:intergenic |
| AGTTCTTGGTTGCTTCCTTT+TGG | 0.205037 | 3.3:-44547186 | MS.gene70957:CDS |
| GGTTGAACATAGCCACTTAT+TGG | 0.233461 | 3.3:+44547495 | None:intergenic |
| GCCTTATGACCTTGAGGTTA+TGG | 0.240514 | 3.3:-44543298 | MS.gene70957:CDS |
| ATTGAAACCTTTATCATCTT+TGG | 0.243859 | 3.3:+44545024 | None:intergenic |
| GGTATTGTTGTAGTTGTTAC+TGG | 0.252556 | 3.3:-44547249 | MS.gene70957:CDS |
| CATAAAATTGTTGTAATCTA+AGG | 0.258555 | 3.3:+44543966 | None:intergenic |
| AATCCATAACCATCAATATT+TGG | 0.271349 | 3.3:+44543002 | None:intergenic |
| GCAATGGGAGACTCTTTAAT+TGG | 0.274794 | 3.3:+44543024 | None:intergenic |
| TGCCATGTTTGGAAGGTTAC+AGG | 0.292837 | 3.3:-44546356 | MS.gene70957:intron |
| TACTTGAAATGGAGCAAAAT+AGG | 0.313813 | 3.3:-44543941 | MS.gene70957:CDS |
| TCACTAAATGTTTCGTTTGT+TGG | 0.314446 | 3.3:-44545174 | MS.gene70957:CDS |
| TATGCAGTATTCTCAATCTT+TGG | 0.322446 | 3.3:+44547366 | None:intergenic |
| TTTGAAGATGGTTTCATCTC+TGG | 0.324926 | 3.3:-44547471 | MS.gene70957:CDS |
| TGGTAAGTCACTTGGATAAC+TGG | 0.344043 | 3.3:+44544583 | None:intergenic |
| ACTGCATATGTTCCACTTGT+TGG | 0.348956 | 3.3:-44547351 | MS.gene70957:CDS |
| TTTAATTGGTGGTTCAAGTA+TGG | 0.352911 | 3.3:+44543038 | None:intergenic |
| TTAATCTGCATGTCGTCATT+TGG | 0.357959 | 3.3:+44544625 | None:intergenic |
| TAGTGGGACTGCTTCAATTA+AGG | 0.358568 | 3.3:-44547154 | MS.gene70957:intron |
| CTCCCATTGCCAAATATTGA+TGG | 0.358870 | 3.3:-44543011 | None:intergenic |
| GGAAGTATACTGTCAGTTCT+TGG | 0.365221 | 3.3:-44547200 | MS.gene70957:CDS |
| ATTAATTGCAATTGCAATTG+AGG | 0.366730 | 3.3:+44545131 | None:intergenic |
| AATCCATTCTTGTAACTTTG+AGG | 0.382384 | 3.3:+44545075 | None:intergenic |
| TGACCTTGAGGTTATGGCTT+CGG | 0.385919 | 3.3:-44543292 | MS.gene70957:CDS |
| CACTTATTGGAATTAATAGA+AGG | 0.394544 | 3.3:+44547508 | None:intergenic |
| AATACTTCGAATGTTATGAT+TGG | 0.397759 | 3.3:-44547279 | MS.gene70957:CDS |
| TTATCTAGTGATATTTGCTT+TGG | 0.407982 | 3.3:+44545204 | None:intergenic |
| CAAGTGACTTACCAAGATAT+TGG | 0.415649 | 3.3:-44544574 | MS.gene70957:CDS |
| CGAGTCCTGGCACAGCAATA+AGG | 0.416671 | 3.3:-44543326 | MS.gene70957:CDS |
| AAGGATTTGTTGATAGAGAA+AGG | 0.422195 | 3.3:-44547417 | MS.gene70957:CDS |
| TCTGTCTGATATCATGATTA+AGG | 0.430948 | 3.3:-44547313 | MS.gene70957:CDS |
| GAGGTTATGGCTTCGGATCA+TGG | 0.432816 | 3.3:-44543285 | MS.gene70957:CDS |
| CTACCTCAAAGTTACAAGAA+TGG | 0.448690 | 3.3:-44545078 | MS.gene70957:CDS |
| TATCGATGAACTAGCTGATC+AGG | 0.448980 | 3.3:-44544704 | MS.gene70957:CDS |
| TGGTTTACCAAAGATGATAA+AGG | 0.454102 | 3.3:-44545031 | MS.gene70957:CDS |
| AACCATCAATATTTGGCAAT+GGG | 0.454746 | 3.3:+44543009 | None:intergenic |
| AAAGAGTAGCACCAATATCT+TGG | 0.456528 | 3.3:+44544563 | None:intergenic |
| ACCACTGAGATGCATGCAAC+AGG | 0.457862 | 3.3:+44544496 | None:intergenic |
| TATGTTCAACCCTTTGAAGA+TGG | 0.462529 | 3.3:-44547483 | MS.gene70957:CDS |
| CAATATCTTGGTAAGTCACT+TGG | 0.471949 | 3.3:+44544575 | None:intergenic |
| CTCTGGTGTTATATCTAACA+AGG | 0.473917 | 3.3:-44547454 | MS.gene70957:CDS |
| GGGAGATTTATCCATAAAGT+TGG | 0.474409 | 3.3:-44546252 | MS.gene70957:CDS |
| CTTCTATTAATTCCAATAAG+TGG | 0.474805 | 3.3:-44547507 | MS.gene70957:CDS |
| AAGTTACAAGAATGGATTCA+AGG | 0.476261 | 3.3:-44545070 | MS.gene70957:CDS |
| ACCTTAGCATTTCCAACAAG+TGG | 0.476530 | 3.3:+44547339 | None:intergenic |
| GCCATAACCTCAAGGTCATA+AGG | 0.478605 | 3.3:+44543297 | None:intergenic |
| TCCATCCAGCGGTGTTCAGA+AGG | 0.487478 | 3.3:+44544680 | None:intergenic |
| ATGGGAGACTCTTTAATTGG+TGG | 0.498405 | 3.3:+44543027 | None:intergenic |
| AGCAGCCTTATTGCTGTGCC+AGG | 0.499447 | 3.3:+44543321 | None:intergenic |
| TAACAGCCTTTCCGCTAGTA+CGG | 0.500012 | 3.3:-44543262 | MS.gene70957:CDS |
| TTAAATTTAAAGAACAAAGA+AGG | 0.511381 | 3.3:-44546314 | MS.gene70957:CDS |
| TCAGGCAGGTAAACTGCAAA+TGG | 0.512515 | 3.3:-44544728 | MS.gene70957:intron |
| AGTAGTTAGAAGGCGAGTCC+TGG | 0.512707 | 3.3:-44543339 | MS.gene70957:intron |
| AAGGTTTCTTCTGCCTGTGG+TGG | 0.514438 | 3.3:-44545051 | MS.gene70957:CDS |
| CAATTAATGGTTTATTCGCA+AGG | 0.517647 | 3.3:-44545116 | MS.gene70957:CDS |
| CAGGCCCTTCTGAACACCGC+TGG | 0.517976 | 3.3:-44544685 | MS.gene70957:CDS |
| ATTGGTGGTTCAAGTATGGT+AGG | 0.518950 | 3.3:+44543042 | None:intergenic |
| TAACCATCAATATTTGGCAA+TGG | 0.526604 | 3.3:+44543008 | None:intergenic |
| TTCAAGGTTTCTTCTGCCTG+TGG | 0.527980 | 3.3:-44545054 | MS.gene70957:CDS |
| AACTTACATTGAAGTAAACT+AGG | 0.530924 | 3.3:+44544974 | None:intergenic |
| AACAGCCTTTCCGCTAGTAC+GGG | 0.531901 | 3.3:-44543261 | MS.gene70957:intron |
| TTTAGATCATGGATGCTATG+TGG | 0.536327 | 3.3:-44546273 | MS.gene70957:CDS |
| TTAGATCATGGATGCTATGT+GGG | 0.536610 | 3.3:-44546272 | MS.gene70957:CDS |
| GGATATCGCTTGTATAATTG+CGG | 0.536713 | 3.3:+44544646 | None:intergenic |
| CCACTATCAGAAATCCCAAA+AGG | 0.540098 | 3.3:+44547171 | None:intergenic |
| CCCTTCTGAACACCGCTGGA+TGG | 0.542120 | 3.3:-44544681 | MS.gene70957:CDS |
| GAGATGAAACCATCTTCAAA+GGG | 0.545150 | 3.3:+44547474 | None:intergenic |
| AGAGATGAAACCATCTTCAA+AGG | 0.545492 | 3.3:+44547473 | None:intergenic |
| AGTTGGATGGTGGAGCAGCT+TGG | 0.564658 | 3.3:-44546235 | MS.gene70957:CDS |
| GATTTATCCATAAAGTTGGA+TGG | 0.565820 | 3.3:-44546248 | MS.gene70957:CDS |
| CATCTTTGGTAAACCACCAC+AGG | 0.568016 | 3.3:+44545038 | None:intergenic |
| ATTTCAGATAAAATAACAGA+AGG | 0.571181 | 3.3:-44545261 | MS.gene70957:CDS |
| AATGTTATGATTGGAGAGAG+TGG | 0.578714 | 3.3:-44547270 | MS.gene70957:CDS |
| AGGTTACAGGCATGCAAGTG+GGG | 0.592851 | 3.3:-44546343 | MS.gene70957:CDS |
| AAGGTTACAGGCATGCAAGT+GGG | 0.595478 | 3.3:-44546344 | MS.gene70957:CDS |
| CCATCCAGCGGTGTTCAGAA+GGG | 0.597504 | 3.3:+44544681 | None:intergenic |
| TTTCAGATAAAATAACAGAA+GGG | 0.599116 | 3.3:-44545260 | MS.gene70957:CDS |
| TCCACTTGTTGGAAATGCTA+AGG | 0.603870 | 3.3:-44547340 | MS.gene70957:CDS |
| TTGTTGATTTGAGTATGAAG+TGG | 0.606189 | 3.3:-44547221 | MS.gene70957:CDS |
| ACTTACATTGAAGTAAACTA+GGG | 0.609703 | 3.3:+44544975 | None:intergenic |
| TTATCCATAAAGTTGGATGG+TGG | 0.620779 | 3.3:-44546245 | MS.gene70957:CDS |
| TAAGTCACTTGGATAACTGG+TGG | 0.625046 | 3.3:+44544586 | None:intergenic |
| GAAGGTTACAGGCATGCAAG+TGG | 0.625055 | 3.3:-44546345 | MS.gene70957:intron |
| ATTGAGGAATTACTCAACAC+AGG | 0.630147 | 3.3:+44545147 | None:intergenic |
| GATCCGAAGCCATAACCTCA+AGG | 0.633359 | 3.3:+44543289 | None:intergenic |
| GCTGCTGCCTTATGACCTTG+AGG | 0.634848 | 3.3:-44543304 | MS.gene70957:CDS |
| AACTATGAATCTCCATCCAG+CGG | 0.645452 | 3.3:+44544669 | None:intergenic |
| TACAACCTTACCCGTACTAG+CGG | 0.651195 | 3.3:+44543251 | None:intergenic |
| ACCTGTTGCATGCATCTCAG+TGG | 0.660833 | 3.3:-44544497 | MS.gene70957:intron |
| TCTGGTGTTATATCTAACAA+GGG | 0.666920 | 3.3:-44547453 | MS.gene70957:CDS |
| CCTTACCCGTACTAGCGGAA+AGG | 0.670306 | 3.3:+44543256 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATATAAATTTTAAATAA+AGG | + | chr3.3:44547381-44547400 | None:intergenic | 0.0% |
| !! | TTAAAGAATAATATACTATT+TGG | + | chr3.3:44544586-44544605 | None:intergenic | 10.0% |
| !!! | ATTTTTAAAAAGAAAAAGTT+AGG | - | chr3.3:44546144-44546163 | MS.gene70957:intron | 10.0% |
| !! | AATAAACAAATATTTGAAAG+GGG | + | chr3.3:44544823-44544842 | None:intergenic | 15.0% |
| !! | CAATAAACAAATATTTGAAA+GGG | + | chr3.3:44544824-44544843 | None:intergenic | 15.0% |
| !! | TCAATAAACAAATATTTGAA+AGG | + | chr3.3:44544825-44544844 | None:intergenic | 15.0% |
| !! | TTAAATTTAAAGAACAAAGA+AGG | - | chr3.3:44544240-44544259 | MS.gene70957:intron | 15.0% |
| !! | TTTCTGTTATAATTATTGTT+TGG | - | chr3.3:44546753-44546772 | MS.gene70957:intron | 15.0% |
| !!! | AAGTTGTTTAATAATTTTTG+TGG | - | chr3.3:44545795-44545814 | MS.gene70957:intron | 15.0% |
| !!! | GATATCTTCATTATATTTTT+AGG | + | chr3.3:44545194-44545213 | None:intergenic | 15.0% |
| !!! | TTCTAATTATTTTTCCTAAT+TGG | - | chr3.3:44545661-44545680 | MS.gene70957:intron | 15.0% |
| !! | AATAAGCATAAAGAAGTTAA+TGG | + | chr3.3:44545220-44545239 | None:intergenic | 20.0% |
| !! | AATAGGATAACGTAATAAAT+AGG | + | chr3.3:44544729-44544748 | None:intergenic | 20.0% |
| !! | ACCATTTATATACAATCTAT+TGG | + | chr3.3:44543588-44543607 | None:intergenic | 20.0% |
| !! | AGAATCATAGAAAAGAAAAT+TGG | + | chr3.3:44545645-44545664 | None:intergenic | 20.0% |
| !! | ATGTTAAGATAGAAAATAAC+GGG | + | chr3.3:44544798-44544817 | None:intergenic | 20.0% |
| !! | ATTGTATTAAAATGAACTGT+TGG | - | chr3.3:44546723-44546742 | MS.gene70957:intron | 20.0% |
| !! | ATTTCAGATAAAATAACAGA+AGG | - | chr3.3:44545293-44545312 | MS.gene70957:CDS | 20.0% |
| !! | CATAAAATTGTTGTAATCTA+AGG | + | chr3.3:44546591-44546610 | None:intergenic | 20.0% |
| !! | CATGTTAAGATAGAAAATAA+CGG | + | chr3.3:44544799-44544818 | None:intergenic | 20.0% |
| !! | CCATTTATATACAATCTATT+GGG | + | chr3.3:44543587-44543606 | None:intergenic | 20.0% |
| !! | GTAAATCAGAATATAAGTAT+TGG | - | chr3.3:44546661-44546680 | MS.gene70957:intron | 20.0% |
| !! | TTAAGAAAATTGCTTACAAT+TGG | + | chr3.3:44544350-44544369 | None:intergenic | 20.0% |
| !! | TTGTATTAAAATGAACTGTT+GGG | - | chr3.3:44546724-44546743 | MS.gene70957:intron | 20.0% |
| !! | TTTCAGATAAAATAACAGAA+GGG | - | chr3.3:44545294-44545313 | MS.gene70957:CDS | 20.0% |
| !!! | AACAATTTGTTTATAAGTGA+GGG | + | chr3.3:44543735-44543754 | None:intergenic | 20.0% |
| !!! | AATTTTATGCATACTTGAAA+TGG | - | chr3.3:44546602-44546621 | MS.gene70957:intron | 20.0% |
| !!! | ACCTTTTTAATAATACTGTT+TGG | + | chr3.3:44546170-44546189 | None:intergenic | 20.0% |
| !!! | ACTTTTTTTATAAGCTAACA+TGG | + | chr3.3:44545045-44545064 | None:intergenic | 20.0% |
| !!! | AGAAGTTATTGTAATTTGTA+GGG | - | chr3.3:44543518-44543537 | MS.gene70957:intron | 20.0% |
| !!! | ATAACAATTGATGTTTTAGA+AGG | - | chr3.3:44546022-44546041 | MS.gene70957:intron | 20.0% |
| !!! | TAACAATTTGTTTATAAGTG+AGG | + | chr3.3:44543736-44543755 | None:intergenic | 20.0% |
| !!! | TAGAAGTTATTGTAATTTGT+AGG | - | chr3.3:44543517-44543536 | MS.gene70957:intron | 20.0% |
| !!! | TTCTGTTATTTTATCTGAAA+TGG | + | chr3.3:44545294-44545313 | None:intergenic | 20.0% |
| !!! | TTCTTATTTTCTAGCTTAAA+CGG | + | chr3.3:44546357-44546376 | None:intergenic | 20.0% |
| !!! | TTTATATTTTCGAATGTGAT+TGG | - | chr3.3:44547391-44547410 | MS.gene70957:CDS | 20.0% |
| ! | AACTTACATTGAAGTAAACT+AGG | + | chr3.3:44545583-44545602 | None:intergenic | 25.0% |
| ! | AACTTCTTTATGCTTATTTC+AGG | - | chr3.3:44545222-44545241 | MS.gene70957:CDS | 25.0% |
| ! | AATACTTCGAATGTTATGAT+TGG | - | chr3.3:44543275-44543294 | MS.gene70957:CDS | 25.0% |
| ! | ACTATTACATAAAACTCGTT+TGG | - | chr3.3:44543877-44543896 | MS.gene70957:intron | 25.0% |
| ! | ACTTACATTGAAGTAAACTA+GGG | + | chr3.3:44545582-44545601 | None:intergenic | 25.0% |
| ! | ATAGAAAAGAAAATTGGCAA+TGG | + | chr3.3:44545639-44545658 | None:intergenic | 25.0% |
| ! | ATTAATTGCAATTGCAATTG+AGG | + | chr3.3:44545426-44545445 | None:intergenic | 25.0% |
| ! | ATTGAAACCTTTATCATCTT+TGG | + | chr3.3:44545533-44545552 | None:intergenic | 25.0% |
| ! | CACTTATTGGAATTAATAGA+AGG | + | chr3.3:44543049-44543068 | None:intergenic | 25.0% |
| ! | CATATAGTTTAGTAGTTAGA+AGG | - | chr3.3:44547205-44547224 | MS.gene70957:CDS | 25.0% |
| ! | CCCAATAGATTGTATATAAA+TGG | - | chr3.3:44543584-44543603 | MS.gene70957:intron | 25.0% |
| ! | CTTCTATTAATTCCAATAAG+TGG | - | chr3.3:44543047-44543066 | MS.gene70957:CDS | 25.0% |
| ! | GAAAAATGATACGAAGTTAA+TGG | - | chr3.3:44543823-44543842 | MS.gene70957:intron | 25.0% |
| ! | GAAAACTAATGTTCTTAAGT+GGG | - | chr3.3:44546102-44546121 | MS.gene70957:intron | 25.0% |
| ! | GATAAAATCATGAAGTTGTT+CGG | + | chr3.3:44546386-44546405 | None:intergenic | 25.0% |
| ! | GCCAAACAGTATTATTAAAA+AGG | - | chr3.3:44546166-44546185 | MS.gene70957:intron | 25.0% |
| ! | TATCTCAATTAGTAAGCAAA+CGG | + | chr3.3:44543906-44543925 | None:intergenic | 25.0% |
| ! | TCAATTGCAATTGCAATTAA+TGG | - | chr3.3:44545425-44545444 | MS.gene70957:intron | 25.0% |
| ! | TGAAAACTAATGTTCTTAAG+TGG | - | chr3.3:44546101-44546120 | MS.gene70957:intron | 25.0% |
| ! | TTATCTAGTGATATTTGCTT+TGG | + | chr3.3:44545353-44545372 | None:intergenic | 25.0% |
| ! | TTCAATCAAGTGATTTGAAA+TGG | + | chr3.3:44546913-44546932 | None:intergenic | 25.0% |
| ! | TTTCTCAAACTATTATCGAT+CGG | + | chr3.3:44543496-44543515 | None:intergenic | 25.0% |
| !! | ATTGTAATTTGTAGGGTAAA+TGG | - | chr3.3:44543525-44543544 | MS.gene70957:intron | 25.0% |
| !! | TAATGGTTAAGTTAGTTTCT+AGG | - | chr3.3:44543840-44543859 | MS.gene70957:intron | 25.0% |
| !!! | AGTTTCTAGGATTCAAATAT+TGG | - | chr3.3:44543853-44543872 | MS.gene70957:intron | 25.0% |
| !!! | ATTTTAGGAAACAATCTTTC+TGG | - | chr3.3:44546562-44546581 | MS.gene70957:intron | 25.0% |
| !!! | TTATATTTTTAGGTCCTGTT+TGG | + | chr3.3:44545184-44545203 | None:intergenic | 25.0% |
| AAAAGATCTCCTACTTGATT+TGG | + | chr3.3:44546274-44546293 | None:intergenic | 30.0% | |
| AAAGTGAAACATGAAGGTTA+AGG | + | chr3.3:44547162-44547181 | None:intergenic | 30.0% | |
| AAATTTAGAAGCTCAGATAG+AGG | + | chr3.3:44544561-44544580 | None:intergenic | 30.0% | |
| AACCTTCATGTTTCACTTTA+AGG | - | chr3.3:44547163-44547182 | MS.gene70957:CDS | 30.0% | |
| AAGCTATATAGGATAGCTTA+TGG | - | chr3.3:44544065-44544084 | MS.gene70957:intron | 30.0% | |
| AAGTGAAACATGAAGGTTAA+GGG | + | chr3.3:44547161-44547180 | None:intergenic | 30.0% | |
| AATCCATTCTTGTAACTTTG+AGG | + | chr3.3:44545482-44545501 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTAC+TGG | - | chr3.3:44544927-44544946 | MS.gene70957:intron | 30.0% | |
| ACTTGATTGAAAGAAAGAGT+GGG | - | chr3.3:44546922-44546941 | MS.gene70957:intron | 30.0% | |
| ATCCTTAAAGTGAAACATGA+AGG | + | chr3.3:44547168-44547187 | None:intergenic | 30.0% | |
| ATTAAAATGAACTGTTGGGT+TGG | - | chr3.3:44546728-44546747 | MS.gene70957:intron | 30.0% | |
| ATTAAGTCGTTTATCCAAAC+AGG | - | chr3.3:44545167-44545186 | MS.gene70957:CDS | 30.0% | |
| CAAATATTGACAGAGTTGAA+GGG | + | chr3.3:44547457-44547476 | None:intergenic | 30.0% | |
| CAATTAATGGTTTATTCGCA+AGG | - | chr3.3:44545438-44545457 | MS.gene70957:intron | 30.0% | |
| CTAAAGCTGAAAACAACTTA+TGG | - | chr3.3:44544033-44544052 | MS.gene70957:intron | 30.0% | |
| GATAACGTAATAAATAGGAG+AGG | + | chr3.3:44544724-44544743 | None:intergenic | 30.0% | |
| GATACCATATTAGAAATCGT+TGG | - | chr3.3:44543667-44543686 | MS.gene70957:intron | 30.0% | |
| GATCAATAGTCTATATGACA+TGG | - | chr3.3:44546487-44546506 | MS.gene70957:intron | 30.0% | |
| GATTGTATATAAATGGTGAG+TGG | - | chr3.3:44543591-44543610 | MS.gene70957:intron | 30.0% | |
| GATTTATCCATAAAGTTGGA+TGG | - | chr3.3:44544306-44544325 | MS.gene70957:intron | 30.0% | |
| GGTATGTTCATAAGCTATAT+AGG | - | chr3.3:44544054-44544073 | MS.gene70957:intron | 30.0% | |
| GTCATATAGACTATTGATCA+TGG | + | chr3.3:44546486-44546505 | None:intergenic | 30.0% | |
| TACTAATTGAGATACCTACT+TGG | - | chr3.3:44543912-44543931 | MS.gene70957:intron | 30.0% | |
| TACTTGAAATGGAGCAAAAT+AGG | - | chr3.3:44546613-44546632 | MS.gene70957:intron | 30.0% | |
| TATGCAGTATTCTCAATCTT+TGG | + | chr3.3:44543191-44543210 | None:intergenic | 30.0% | |
| TCAATTCAAGCTATCCATTA+TGG | + | chr3.3:44546783-44546802 | None:intergenic | 30.0% | |
| TCACTAAATGTTTCGTTTGT+TGG | - | chr3.3:44545380-44545399 | MS.gene70957:intron | 30.0% | |
| TCCACTTCAAGTATTTATGT+CGG | - | chr3.3:44545746-44545765 | MS.gene70957:intron | 30.0% | |
| TCTGTCTGATATCATGATTA+AGG | - | chr3.3:44543241-44543260 | MS.gene70957:intron | 30.0% | |
| TGGTTTACCAAAGATGATAA+AGG | - | chr3.3:44545523-44545542 | MS.gene70957:intron | 30.0% | |
| ! | AAGTTACAAGAATGGATTCA+AGG | - | chr3.3:44545484-44545503 | MS.gene70957:intron | 30.0% |
| ! | AAGTTGAGTCTTTTAGATCA+TGG | - | chr3.3:44544270-44544289 | MS.gene70957:intron | 30.0% |
| ! | ACAACTTCATTGACTATAAC+AGG | - | chr3.3:44544605-44544624 | MS.gene70957:CDS | 30.0% |
| ! | CTTTTCAAAAAGTAGTTGAG+TGG | - | chr3.3:44546242-44546261 | MS.gene70957:CDS | 30.0% |
| ! | TAATTTGTAGGGTAAATGGT+GGG | - | chr3.3:44543529-44543548 | MS.gene70957:intron | 30.0% |
| ! | TCAAGTGATTTGAAATGGTA+TGG | + | chr3.3:44546908-44546927 | None:intergenic | 30.0% |
| ! | TGACAGCTTTTTATCCAATT+AGG | + | chr3.3:44545678-44545697 | None:intergenic | 30.0% |
| ! | TTTAATTGGTGGTTCAAGTA+TGG | + | chr3.3:44547519-44547538 | None:intergenic | 30.0% |
| !! | AAGGATTTGTTGATAGAGAA+AGG | - | chr3.3:44543137-44543156 | MS.gene70957:intron | 30.0% |
| !! | AGAAAATTGGCAATGGATTA+TGG | + | chr3.3:44545632-44545651 | None:intergenic | 30.0% |
| !! | CATAAGTTGTTTTCAGCTTT+AGG | + | chr3.3:44544035-44544054 | None:intergenic | 30.0% |
| !! | TATTGTTTGGTTTGCCATAA+TGG | - | chr3.3:44546766-44546785 | MS.gene70957:intron | 30.0% |
| !! | TCATGTGCTGTTGAAATTTT+AGG | - | chr3.3:44546547-44546566 | MS.gene70957:intron | 30.0% |
| !! | TCTGGTGTTATATCTAACAA+GGG | - | chr3.3:44543101-44543120 | MS.gene70957:intron | 30.0% |
| !! | TTGTTGATTTGAGTATGAAG+TGG | - | chr3.3:44543333-44543352 | MS.gene70957:CDS | 30.0% |
| !!! | ACAATTGATGTTTTAGAAGG+CGG | - | chr3.3:44546025-44546044 | MS.gene70957:intron | 30.0% |
| !!! | ATTTTTGTGGTTTTATGCTC+AGG | - | chr3.3:44545808-44545827 | MS.gene70957:intron | 30.0% |
| AAAGAAAGAGTGGGGATAAT+CGG | - | chr3.3:44546931-44546950 | MS.gene70957:intron | 35.0% | |
| AAAGAGTAGCACCAATATCT+TGG | + | chr3.3:44545994-44546013 | None:intergenic | 35.0% | |
| AACAAAACTCTGATCCAAGT+AGG | + | chr3.3:44543929-44543948 | None:intergenic | 35.0% | |
| AATAAATAGGAGAGGACACA+TGG | + | chr3.3:44544716-44544735 | None:intergenic | 35.0% | |
| AATGTTATGATTGGAGAGAG+TGG | - | chr3.3:44543284-44543303 | MS.gene70957:CDS | 35.0% | |
| ACATTAAAGGCCTGATGTAA+GGG | - | chr3.3:44544891-44544910 | MS.gene70957:intron | 35.0% | |
| ACTATTATCGATCGGTATCT+AGG | + | chr3.3:44543488-44543507 | None:intergenic | 35.0% | |
| AGAGATGAAACCATCTTCAA+AGG | + | chr3.3:44543084-44543103 | None:intergenic | 35.0% | |
| AGGTCCAACGATTTCTAATA+TGG | + | chr3.3:44543674-44543693 | None:intergenic | 35.0% | |
| AGTATGGCTTATCAGAAACA+TGG | + | chr3.3:44544374-44544393 | None:intergenic | 35.0% | |
| ATAAATAGGAGAGGACACAT+GGG | + | chr3.3:44544715-44544734 | None:intergenic | 35.0% | |
| ATCATCTCGTCTCACATTAA+AGG | - | chr3.3:44544878-44544897 | MS.gene70957:intron | 35.0% | |
| ATTCGGTCATATAGACTAGT+CGG | - | chr3.3:44545707-44545726 | MS.gene70957:intron | 35.0% | |
| ATTGAGGAATTACTCAACAC+AGG | + | chr3.3:44545410-44545429 | None:intergenic | 35.0% | |
| CAAGTGACTTACCAAGATAT+TGG | - | chr3.3:44545980-44545999 | MS.gene70957:intron | 35.0% | |
| CAATATCTTGGTAAGTCACT+TGG | + | chr3.3:44545982-44546001 | None:intergenic | 35.0% | |
| CACTTGATTGAAAGAAAGAG+TGG | - | chr3.3:44546921-44546940 | MS.gene70957:intron | 35.0% | |
| CTACCTCAAAGTTACAAGAA+TGG | - | chr3.3:44545476-44545495 | MS.gene70957:intron | 35.0% | |
| CTTCAAGTATTTATGTCGGA+TGG | - | chr3.3:44545750-44545769 | MS.gene70957:intron | 35.0% | |
| CTTGATTGAAAGAAAGAGTG+GGG | - | chr3.3:44546923-44546942 | MS.gene70957:intron | 35.0% | |
| CTTGTTAAAGAGTCTCACAT+TGG | + | chr3.3:44543782-44543801 | None:intergenic | 35.0% | |
| GAAAGAACGTATGAACAGTA+TGG | + | chr3.3:44544390-44544409 | None:intergenic | 35.0% | |
| GAGATGAAACCATCTTCAAA+GGG | + | chr3.3:44543083-44543102 | None:intergenic | 35.0% | |
| GCAAATATTGACAGAGTTGA+AGG | + | chr3.3:44547458-44547477 | None:intergenic | 35.0% | |
| GGATAACATCAGATAACAGA+TGG | + | chr3.3:44543761-44543780 | None:intergenic | 35.0% | |
| GGATATCGCTTGTATAATTG+CGG | + | chr3.3:44545911-44545930 | None:intergenic | 35.0% | |
| GGGAGATTTATCCATAAAGT+TGG | - | chr3.3:44544302-44544321 | MS.gene70957:intron | 35.0% | |
| GGTATTGTTGTAGTTGTTAC+TGG | - | chr3.3:44543305-44543324 | MS.gene70957:CDS | 35.0% | |
| GTACCAAATCTTCAGATTGA+AGG | - | chr3.3:44546961-44546980 | MS.gene70957:intron | 35.0% | |
| TATGGTCAAATACATGCTCA+AGG | - | chr3.3:44546852-44546871 | MS.gene70957:intron | 35.0% | |
| TCCGACATAAATACTTGAAG+TGG | + | chr3.3:44545750-44545769 | None:intergenic | 35.0% | |
| TCTGACATATGTCAGACATT+GGG | + | chr3.3:44546991-44547010 | None:intergenic | 35.0% | |
| TGCTGAGACAGAAAAATCAT+TGG | + | chr3.3:44546432-44546451 | None:intergenic | 35.0% | |
| TTAATCTGCATGTCGTCATT+TGG | + | chr3.3:44545932-44545951 | None:intergenic | 35.0% | |
| TTAGATCATGGATGCTATGT+GGG | - | chr3.3:44544282-44544301 | MS.gene70957:intron | 35.0% | |
| TTATCCATAAAGTTGGATGG+TGG | - | chr3.3:44544309-44544328 | MS.gene70957:intron | 35.0% | |
| TTGTATTAGACCACATGTGT+TGG | + | chr3.3:44547032-44547051 | None:intergenic | 35.0% | |
| TTTAGATCATGGATGCTATG+TGG | - | chr3.3:44544281-44544300 | MS.gene70957:intron | 35.0% | |
| TTTGAAGATGGTTTCATCTC+TGG | - | chr3.3:44543083-44543102 | MS.gene70957:intron | 35.0% | |
| ! | ATTTTTCTGTCTCAGCATGA+CGG | - | chr3.3:44546435-44546454 | MS.gene70957:intron | 35.0% |
| ! | CAAGGGTCTTGATTTTCTTA+AGG | - | chr3.3:44543118-44543137 | MS.gene70957:intron | 35.0% |
| ! | CGATTTTGCGAGGTTATATT+AGG | + | chr3.3:44543694-44543713 | None:intergenic | 35.0% |
| ! | GTAATTTGTAGGGTAAATGG+TGG | - | chr3.3:44543528-44543547 | MS.gene70957:intron | 35.0% |
| ! | TATGTTCAACCCTTTGAAGA+TGG | - | chr3.3:44543071-44543090 | MS.gene70957:CDS | 35.0% |
| !! | AGATGACTGGTCTTGAATTA+TGG | - | chr3.3:44546834-44546853 | MS.gene70957:intron | 35.0% |
| !! | CTCTGGTGTTATATCTAACA+AGG | - | chr3.3:44543100-44543119 | MS.gene70957:intron | 35.0% |
| !! | GAGGTATTTTCGATTTTCTG+TGG | + | chr3.3:44544542-44544561 | None:intergenic | 35.0% |
| !!! | CTTTTGGGATTTCTGATAGT+GGG | - | chr3.3:44543384-44543403 | MS.gene70957:intron | 35.0% |
| AACTATGAATCTCCATCCAG+CGG | + | chr3.3:44545888-44545907 | None:intergenic | 40.0% | |
| AAGCTAACATGGAGAGCTTA+TGG | + | chr3.3:44545034-44545053 | None:intergenic | 40.0% | |
| ACCTTAGCATTTCCAACAAG+TGG | + | chr3.3:44543218-44543237 | None:intergenic | 40.0% | |
| ACGCCTTCAATCTGAAGATT+TGG | + | chr3.3:44546967-44546986 | None:intergenic | 40.0% | |
| ACTGCATATGTTCCACTTGT+TGG | - | chr3.3:44543203-44543222 | MS.gene70957:intron | 40.0% | |
| AGACACTGACACATCAACAA+TGG | + | chr3.3:44547082-44547101 | None:intergenic | 40.0% | |
| AGCTGTCAGAAATGACGATT+CGG | - | chr3.3:44545690-44545709 | MS.gene70957:intron | 40.0% | |
| AGTCAGATAGCAAACGACAA+AGG | + | chr3.3:44547421-44547440 | None:intergenic | 40.0% | |
| ATCTAGTGCACACAGTTAAC+AGG | + | chr3.3:44546818-44546837 | None:intergenic | 40.0% | |
| ATGGGAGACTCTTTAATTGG+TGG | + | chr3.3:44547530-44547549 | None:intergenic | 40.0% | |
| ATTGTTCTTGCTTATGCTGC+AGG | - | chr3.3:44546513-44546532 | MS.gene70957:intron | 40.0% | |
| CACATTAAAGGCCTGATGTA+AGG | - | chr3.3:44544890-44544909 | MS.gene70957:intron | 40.0% | |
| CAGTGACAACTAGAGTAGTT+CGG | + | chr3.3:44544767-44544786 | None:intergenic | 40.0% | |
| CCACTATCAGAAATCCCAAA+AGG | + | chr3.3:44543386-44543405 | None:intergenic | 40.0% | |
| CTCTGACATATGTCAGACAT+TGG | + | chr3.3:44546992-44547011 | None:intergenic | 40.0% | |
| GCAATGGGAGACTCTTTAAT+TGG | + | chr3.3:44547533-44547552 | None:intergenic | 40.0% | |
| GCAGCATAAGCAAGAACAAT+GGG | + | chr3.3:44546513-44546532 | None:intergenic | 40.0% | |
| GGTTGAACATAGCCACTTAT+TGG | + | chr3.3:44543062-44543081 | None:intergenic | 40.0% | |
| GTTGCAAAAGGGAAAATCCT+AGG | + | chr3.3:44544645-44544664 | None:intergenic | 40.0% | |
| TAAGTCACTTGGATAACTGG+TGG | + | chr3.3:44545971-44545990 | None:intergenic | 40.0% | |
| TAGTGGGACTGCTTCAATTA+AGG | - | chr3.3:44543400-44543419 | MS.gene70957:intron | 40.0% | |
| TATCGATGAACTAGCTGATC+AGG | - | chr3.3:44545850-44545869 | MS.gene70957:intron | 40.0% | |
| TCTCTTGACAGATCGAGTTT+GGG | + | chr3.3:44547341-44547360 | None:intergenic | 40.0% | |
| TGACTAGAGAACAGAGTAGT+GGG | + | chr3.3:44544453-44544472 | None:intergenic | 40.0% | |
| TGCAGCATAAGCAAGAACAA+TGG | + | chr3.3:44546514-44546533 | None:intergenic | 40.0% | |
| TGGAGCTTTCCAAATCAAGT+AGG | - | chr3.3:44546262-44546281 | MS.gene70957:CDS | 40.0% | |
| TGGTAAGTCACTTGGATAAC+TGG | + | chr3.3:44545974-44545993 | None:intergenic | 40.0% | |
| TTGACTAGAGAACAGAGTAG+TGG | + | chr3.3:44544454-44544473 | None:intergenic | 40.0% | |
| ! | AAATACATGCTCAAGGTGCT+AGG | - | chr3.3:44546859-44546878 | MS.gene70957:intron | 40.0% |
| ! | ACTGCACATACGTCTTTTTC+AGG | - | chr3.3:44546639-44546658 | MS.gene70957:intron | 40.0% |
| ! | AGAGTAGTTCGGTGATTAGT+TGG | + | chr3.3:44544756-44544775 | None:intergenic | 40.0% |
| ! | AGGATTTTCCCTTTTGCAAC+AGG | - | chr3.3:44544645-44544664 | MS.gene70957:CDS | 40.0% |
| ! | AGTTCTTGGTTGCTTCCTTT+TGG | - | chr3.3:44543368-44543387 | MS.gene70957:intron | 40.0% |
| ! | ATTGGTGGTTCAAGTATGGT+AGG | + | chr3.3:44547515-44547534 | None:intergenic | 40.0% |
| ! | GGAAGTATACTGTCAGTTCT+TGG | - | chr3.3:44543354-44543373 | MS.gene70957:intron | 40.0% |
| ! | GGATTTTCCCTTTTGCAACA+GGG | - | chr3.3:44544646-44544665 | MS.gene70957:CDS | 40.0% |
| ! | GGTGATTAGTTGGACGAAAT+AGG | + | chr3.3:44544746-44544765 | None:intergenic | 40.0% |
| ! | GGTTAAGGGCAAAAAGTATG+TGG | + | chr3.3:44547147-44547166 | None:intergenic | 40.0% |
| ! | GTTCTTGGTTGCTTCCTTTT+GGG | - | chr3.3:44543369-44543388 | MS.gene70957:intron | 40.0% |
| ! | TCCACTTGTTGGAAATGCTA+AGG | - | chr3.3:44543214-44543233 | MS.gene70957:intron | 40.0% |
| !!! | CCTTTTGGGATTTCTGATAG+TGG | - | chr3.3:44543383-44543402 | MS.gene70957:intron | 40.0% |
| AACTGTGTGCACTAGATGAC+TGG | - | chr3.3:44546821-44546840 | MS.gene70957:intron | 45.0% | |
| AAGGTTACAGGCATGCAAGT+GGG | - | chr3.3:44544210-44544229 | MS.gene70957:intron | 45.0% | |
| AGCAATGACCCTGTTGCAAA+AGG | + | chr3.3:44544657-44544676 | None:intergenic | 45.0% | |
| AGGAGAATGTCTTTCCTCCT+AGG | - | chr3.3:44544625-44544644 | MS.gene70957:CDS | 45.0% | |
| CATCTTTGGTAAACCACCAC+AGG | + | chr3.3:44545519-44545538 | None:intergenic | 45.0% | |
| CGAACTACTCTAGTTGTCAC+TGG | - | chr3.3:44544765-44544784 | MS.gene70957:intron | 45.0% | |
| GCAAAAGGGAAAATCCTAGG+AGG | + | chr3.3:44544642-44544661 | None:intergenic | 45.0% | |
| GCAATGACCCTGTTGCAAAA+GGG | + | chr3.3:44544656-44544675 | None:intergenic | 45.0% | |
| GCCATAACCTCAAGGTCATA+AGG | + | chr3.3:44547260-44547279 | None:intergenic | 45.0% | |
| GCCTTATGACCTTGAGGTTA+TGG | - | chr3.3:44547256-44547275 | MS.gene70957:CDS | 45.0% | |
| GTATGAAGCAGTGACAGACA+CGG | + | chr3.3:44547114-44547133 | None:intergenic | 45.0% | |
| GTCTCTTGACAGATCGAGTT+TGG | + | chr3.3:44547342-44547361 | None:intergenic | 45.0% | |
| TAACAGCCTTTCCGCTAGTA+CGG | - | chr3.3:44547292-44547311 | MS.gene70957:CDS | 45.0% | |
| TACAACCTTACCCGTACTAG+CGG | + | chr3.3:44547306-44547325 | None:intergenic | 45.0% | |
| TCAGGCAGGTAAACTGCAAA+TGG | - | chr3.3:44545826-44545845 | MS.gene70957:intron | 45.0% | |
| TCCAAACAGACCCTTACATC+AGG | + | chr3.3:44544904-44544923 | None:intergenic | 45.0% | |
| TGACCTTGAGGTTATGGCTT+CGG | - | chr3.3:44547262-44547281 | MS.gene70957:CDS | 45.0% | |
| TGCCATGTTTGGAAGGTTAC+AGG | - | chr3.3:44544198-44544217 | MS.gene70957:intron | 45.0% | |
| TGCCTGTAACCTTCCAAACA+TGG | + | chr3.3:44544203-44544222 | None:intergenic | 45.0% | |
| TGCTACCAAGATTCCGCATT+CGG | + | chr3.3:44543618-44543637 | None:intergenic | 45.0% | |
| TGCTCCACCATCCAACTTTA+TGG | + | chr3.3:44544316-44544335 | None:intergenic | 45.0% | |
| TTCAAGGTTTCTTCTGCCTG+TGG | - | chr3.3:44545500-44545519 | MS.gene70957:intron | 45.0% | |
| TTGACAGATCGAGTTTGGGA+GGG | + | chr3.3:44547337-44547356 | None:intergenic | 45.0% | |
| ! | ACATCACAAGCGATTTTGCG+AGG | + | chr3.3:44543704-44543723 | None:intergenic | 45.0% |
| ! | GAAAGCGGAAACTTGATAGC+AGG | - | chr3.3:44543558-44543577 | MS.gene70957:intron | 45.0% |
| ! | TTTGTAGGGTAAATGGTGGG+TGG | - | chr3.3:44543532-44543551 | MS.gene70957:intron | 45.0% |
| !! | AATGGTGGGTGGTTTGAAAG+CGG | - | chr3.3:44543543-44543562 | MS.gene70957:intron | 45.0% |
| !! | ATGGTAGGACAGCTGTTTTG+AGG | + | chr3.3:44547500-44547519 | None:intergenic | 45.0% |
| !!! | TTGTGGTTTTATGCTCAGGC+AGG | - | chr3.3:44545812-44545831 | MS.gene70957:intron | 45.0% |
| !! | ATGTATAAAAAATAAATATA+AGG | - | chr3.3:44546217-44546236 | MS.gene70957:intron | 5.0% |
| AACAGCCTTTCCGCTAGTAC+GGG | - | chr3.3:44547293-44547312 | MS.gene70957:CDS | 50.0% | |
| AAGGTTTCTTCTGCCTGTGG+TGG | - | chr3.3:44545503-44545522 | MS.gene70957:intron | 50.0% | |
| AATGGTGAGTGGTCCGAATG+CGG | - | chr3.3:44543602-44543621 | MS.gene70957:intron | 50.0% | |
| ACCACTGAGATGCATGCAAC+AGG | + | chr3.3:44546061-44546080 | None:intergenic | 50.0% | |
| ACCTGTTGCATGCATCTCAG+TGG | - | chr3.3:44546057-44546076 | MS.gene70957:intron | 50.0% | |
| AGGTTACAGGCATGCAAGTG+GGG | - | chr3.3:44544211-44544230 | MS.gene70957:intron | 50.0% | |
| AGTAGTTAGAAGGCGAGTCC+TGG | - | chr3.3:44547215-44547234 | MS.gene70957:CDS | 50.0% | |
| CTTGACAGATCGAGTTTGGG+AGG | + | chr3.3:44547338-44547357 | None:intergenic | 50.0% | |
| GAAGGTTACAGGCATGCAAG+TGG | - | chr3.3:44544209-44544228 | MS.gene70957:intron | 50.0% | |
| GAGGTTATGGCTTCGGATCA+TGG | - | chr3.3:44547269-44547288 | MS.gene70957:CDS | 50.0% | |
| GAGTTGTGCTGTGCCATGTT+TGG | - | chr3.3:44544187-44544206 | MS.gene70957:intron | 50.0% | |
| GATCCGAAGCCATAACCTCA+AGG | + | chr3.3:44547268-44547287 | None:intergenic | 50.0% | |
| GCCTGATGTAAGGGTCTGTT+TGG | - | chr3.3:44544900-44544919 | MS.gene70957:intron | 50.0% | |
| GTTGCATGCATCTCAGTGGT+AGG | - | chr3.3:44546061-44546080 | MS.gene70957:intron | 50.0% | |
| TGACACGACACCAACACATG+TGG | - | chr3.3:44547019-44547038 | MS.gene70957:intron | 50.0% | |
| TGTGCTGTGCCATGTTTGGA+AGG | - | chr3.3:44544191-44544210 | MS.gene70957:intron | 50.0% | |
| ! | GAATGCGGAATCTTGGTAGC+AGG | - | chr3.3:44543617-44543636 | MS.gene70957:intron | 50.0% |
| AGAGCCTCTTCAAGATCCGC+TGG | + | chr3.3:44543647-44543666 | None:intergenic | 55.0% | |
| AGGAGAGGACACATGGGAAG+AGG | + | chr3.3:44544709-44544728 | None:intergenic | 55.0% | |
| CCATCCAGCGGTGTTCAGAA+GGG | + | chr3.3:44545876-44545895 | None:intergenic | 55.0% | |
| CCTTACCCGTACTAGCGGAA+AGG | + | chr3.3:44547301-44547320 | None:intergenic | 55.0% | |
| CCTTTCCGCTAGTACGGGTA+AGG | - | chr3.3:44547298-44547317 | MS.gene70957:CDS | 55.0% | |
| CGAGTCCTGGCACAGCAATA+AGG | - | chr3.3:44547228-44547247 | MS.gene70957:CDS | 55.0% | |
| GAGCCTCTTCAAGATCCGCT+GGG | + | chr3.3:44543646-44543665 | None:intergenic | 55.0% | |
| GCTGCTGCCTTATGACCTTG+AGG | - | chr3.3:44547250-44547269 | MS.gene70957:CDS | 55.0% | |
| GGAGAGGACACATGGGAAGA+GGG | + | chr3.3:44544708-44544727 | None:intergenic | 55.0% | |
| GTGGTCCGAATGCGGAATCT+TGG | - | chr3.3:44543610-44543629 | MS.gene70957:intron | 55.0% | |
| TCCATCCAGCGGTGTTCAGA+AGG | + | chr3.3:44545877-44545896 | None:intergenic | 55.0% | |
| TTGCCCAGCGGATCTTGAAG+AGG | - | chr3.3:44543640-44543659 | MS.gene70957:intron | 55.0% | |
| !! | AGCAGCCTTATTGCTGTGCC+AGG | + | chr3.3:44547236-44547255 | None:intergenic | 55.0% |
| !! | AGTTGGATGGTGGAGCAGCT+TGG | - | chr3.3:44544319-44544338 | MS.gene70957:intron | 55.0% |
| CCCTTCTGAACACCGCTGGA+TGG | - | chr3.3:44545873-44545892 | MS.gene70957:intron | 60.0% | |
| ! | CTTGGTAGCAGGTTGCCCAG+CGG | - | chr3.3:44543628-44543647 | MS.gene70957:intron | 60.0% |
| CAGGCCCTTCTGAACACCGC+TGG | - | chr3.3:44545869-44545888 | MS.gene70957:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 44543014 | 44547562 | 44543014 | ID=MS.gene70957 |
| chr3.3 | mRNA | 44543014 | 44547562 | 44543014 | ID=MS.gene70957.t1;Parent=MS.gene70957 |
| chr3.3 | exon | 44547155 | 44547562 | 44547155 | ID=MS.gene70957.t1.exon1;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44547155 | 44547562 | 44547155 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44546224 | 44546363 | 44546224 | ID=MS.gene70957.t1.exon2;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44546224 | 44546363 | 44546224 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44544981 | 44545332 | 44544981 | ID=MS.gene70957.t1.exon3;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44544981 | 44545332 | 44544981 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44544498 | 44544746 | 44544498 | ID=MS.gene70957.t1.exon4;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44544498 | 44544746 | 44544498 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44543916 | 44544041 | 44543916 | ID=MS.gene70957.t1.exon5;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44543916 | 44544041 | 44543916 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44543262 | 44543352 | 44543262 | ID=MS.gene70957.t1.exon6;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44543262 | 44543352 | 44543262 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| chr3.3 | exon | 44543014 | 44543096 | 44543014 | ID=MS.gene70957.t1.exon7;Parent=MS.gene70957.t1 |
| chr3.3 | CDS | 44543014 | 44543096 | 44543014 | ID=cds.MS.gene70957.t1;Parent=MS.gene70957.t1 |
| Gene Sequence |
| Protein sequence |
