Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71642.t1 | XP_024626891.1 | 96.7 | 336 | 11 | 0 | 42 | 377 | 44 | 379 | 7.20E-173 | 616.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71642.t1 | A0A396K343 | 96.7 | 336 | 11 | 0 | 42 | 377 | 44 | 379 | 5.2e-173 | 616.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052004 | MS.gene71642 | 0.803676 | 3.11E-49 | -1.69E-46 |
| MS.gene053443 | MS.gene71642 | -0.824572 | 7.51E-54 | -1.69E-46 |
| MS.gene054413 | MS.gene71642 | -0.829572 | 4.78E-55 | -1.69E-46 |
| MS.gene057684 | MS.gene71642 | 0.845068 | 5.11E-59 | -1.69E-46 |
| MS.gene05985 | MS.gene71642 | 0.811612 | 6.42E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71642.t1 | MTR_6g008890 | 35.714 | 378 | 199 | 12 | 1 | 362 | 6 | 355 | 5.35e-56 | 187 |
| MS.gene71642.t1 | MTR_4g071610 | 35.714 | 378 | 199 | 12 | 1 | 362 | 6 | 355 | 5.35e-56 | 187 |
| MS.gene71642.t1 | MTR_3g115240 | 27.761 | 335 | 167 | 13 | 47 | 373 | 65 | 332 | 9.64e-23 | 98.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71642.t1 | AT2G14910 | 65.559 | 331 | 95 | 4 | 52 | 370 | 63 | 386 | 1.61e-140 | 405 |
| MS.gene71642.t1 | AT2G14910 | 65.052 | 289 | 92 | 2 | 53 | 339 | 71 | 352 | 6.18e-122 | 357 |
| MS.gene71642.t1 | AT5G14970 | 37.363 | 364 | 187 | 8 | 12 | 362 | 19 | 354 | 5.27e-59 | 195 |
| MS.gene71642.t1 | AT1G63610 | 26.645 | 304 | 162 | 8 | 58 | 361 | 84 | 326 | 1.94e-22 | 97.4 |
| MS.gene71642.t1 | AT1G63610 | 29.648 | 199 | 111 | 6 | 58 | 256 | 84 | 253 | 2.45e-16 | 78.6 |
| MS.gene71642.t1 | AT1G63610 | 37.500 | 88 | 55 | 0 | 58 | 145 | 84 | 171 | 4.89e-14 | 70.5 |
Find 95 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTTGCCCGCCTGCTCTTT+TGG | 0.245314 | 1.4:-82515207 | MS.gene71642:intron |
| TTTGTAGAAATCTGCTTTAT+CGG | 0.259410 | 1.4:-82518250 | MS.gene71642:intron |
| GCTATGAAAAGGACCATTTC+TGG | 0.273572 | 1.4:-82518156 | MS.gene71642:CDS |
| AGAAGAAAAGAATGATTTAC+TGG | 0.277554 | 1.4:-82516280 | MS.gene71642:CDS |
| TCCCGAGTTAATGATATAAA+AGG | 0.301606 | 1.4:+82515232 | None:intergenic |
| GAGGGCTTTGAATGCATCTT+AGG | 0.310216 | 1.4:+82515346 | None:intergenic |
| AGGAAGAGAGGAGGAGGAGG+AGG | 0.330947 | 1.4:+82518548 | None:intergenic |
| GGAGGAGGAGGAGAGGATGG+AGG | 0.333544 | 1.4:+82518563 | None:intergenic |
| CTTCAAATGCAGCAATTTGT+TGG | 0.343190 | 1.4:-82516303 | MS.gene71642:CDS |
| ATTTACATCCCCTGAGCTTA+AGG | 0.344914 | 1.4:-82515413 | MS.gene71642:CDS |
| TGCTGAGTATAGGCTTTGTT+TGG | 0.347450 | 1.4:-82517243 | MS.gene71642:CDS |
| AGGACCATTTCTGGTATGTT+GGG | 0.354983 | 1.4:-82518147 | MS.gene71642:CDS |
| GAGAGGAAGAGAGGAGGAGG+AGG | 0.372062 | 1.4:+82518545 | None:intergenic |
| AACTTAGTACTTTCTGCCTT+CGG | 0.377112 | 1.4:+82517182 | None:intergenic |
| CTCATTTCTTCAATGATGAC+TGG | 0.387115 | 1.4:-82518060 | MS.gene71642:CDS |
| CCCTCGAAGGTGCATGCTGT+TGG | 0.406060 | 1.4:-82514968 | MS.gene71642:intron |
| GAGATCGCTTCAACCTGAAC+AGG | 0.407417 | 1.4:-82516250 | MS.gene71642:intron |
| ACAAAAGGCAAAACCTGTTC+AGG | 0.409693 | 1.4:+82516237 | None:intergenic |
| CTGTTGGGACACTATCTTAG+AGG | 0.422319 | 1.4:-82514952 | MS.gene71642:CDS |
| AAGCTCAGGGGATGTAAATT+CGG | 0.424523 | 1.4:+82515417 | None:intergenic |
| TGAATATTACTCACATCTAA+AGG | 0.427179 | 1.4:+82518207 | None:intergenic |
| GGAGGAGAGGATGGAGGGAA+GGG | 0.427494 | 1.4:+82518569 | None:intergenic |
| AGGAGGAGAGGATGGAGGGA+AGG | 0.429740 | 1.4:+82518568 | None:intergenic |
| CCTCGAAGGTGCATGCTGTT+GGG | 0.434431 | 1.4:-82514967 | MS.gene71642:intron |
| CAACCCCAACATACCAGAAA+TGG | 0.436781 | 1.4:+82518143 | None:intergenic |
| CCTTGAGTATCGAATGGAAT+TGG | 0.442917 | 1.4:-82514929 | MS.gene71642:CDS |
| GAGGAGGAGGAGAGGATGGA+GGG | 0.444293 | 1.4:+82518564 | None:intergenic |
| CATTGAAGAAATGAGTAACT+TGG | 0.446046 | 1.4:+82518068 | None:intergenic |
| TTCATAGCATCAGCTGTAGT+TGG | 0.452605 | 1.4:+82518171 | None:intergenic |
| TTGAATGCATCTTAGGAGAA+AGG | 0.461924 | 1.4:+82515353 | None:intergenic |
| ATGTCGTTGTTGAGGCTTTG+TGG | 0.462573 | 1.4:-82518101 | MS.gene71642:CDS |
| AGAAATATATTCTTGAGCTT+CGG | 0.466226 | 1.4:+82517034 | None:intergenic |
| ATGGAGAGGAAGAGAGGAGG+AGG | 0.467307 | 1.4:+82518542 | None:intergenic |
| AAGGACCATTTCTGGTATGT+TGG | 0.467555 | 1.4:-82518148 | MS.gene71642:CDS |
| TGTCGTTGTTGAGGCTTTGT+GGG | 0.467846 | 1.4:-82518100 | MS.gene71642:CDS |
| GAGAAAGAGAAGGAAGGAGA+GGG | 0.482114 | 1.4:+82518510 | None:intergenic |
| GCAGAAGCGAGAACAAGAAA+GGG | 0.487309 | 1.4:+82518453 | None:intergenic |
| TGCAGAAGCGAGAACAAGAA+AGG | 0.488121 | 1.4:+82518452 | None:intergenic |
| AGGATGATGTCCTTAAGCTC+AGG | 0.490001 | 1.4:+82515403 | None:intergenic |
| CATTGCGCAATGCTGAGTAT+AGG | 0.493261 | 1.4:-82517253 | MS.gene71642:CDS |
| ACAGTTGGATCAGCAAATGC+TGG | 0.494546 | 1.4:-82515304 | MS.gene71642:CDS |
| AGAGAAAGAGAAGGAAGGAG+AGG | 0.495517 | 1.4:+82518509 | None:intergenic |
| GGTAAAGTCGTTGGAGGAGT+GGG | 0.495967 | 1.4:+82518428 | None:intergenic |
| AGAGGAGAGAAAGAGAAGGA+AGG | 0.507778 | 1.4:+82518504 | None:intergenic |
| GGAGACCGTGGACAACAGAT+AGG | 0.510446 | 1.4:+82515383 | None:intergenic |
| TGAATGCATCTTAGGAGAAA+GGG | 0.514493 | 1.4:+82515354 | None:intergenic |
| AGTGTAAATGTTATTGACTT+TGG | 0.517614 | 1.4:-82517134 | MS.gene71642:CDS |
| TACCTTGGAGGTAAAGTCGT+TGG | 0.519637 | 1.4:+82518419 | None:intergenic |
| TGCATTCTCTGATGTAGTAG+AGG | 0.521881 | 1.4:+82515327 | None:intergenic |
| TTGACAAATGTTGCTGAGAA+TGG | 0.525788 | 1.4:-82514892 | MS.gene71642:CDS |
| AAGGAGAGGGACGGAAGCGA+TGG | 0.527345 | 1.4:+82518523 | None:intergenic |
| AAGAGAAGGAAGGAGAGGGA+CGG | 0.527623 | 1.4:+82518514 | None:intergenic |
| GCATTCTCTGATGTAGTAGA+GGG | 0.533188 | 1.4:+82515328 | None:intergenic |
| TCAATTTAATGTCGTTGTTG+AGG | 0.537014 | 1.4:-82518109 | MS.gene71642:CDS |
| CTACAGCTGATGCTATGAAA+AGG | 0.537612 | 1.4:-82518167 | MS.gene71642:CDS |
| TCATTTCTTCAATGATGACT+GGG | 0.538264 | 1.4:-82518059 | MS.gene71642:intron |
| ATCAGCAAATGCTGGGAATG+AGG | 0.548689 | 1.4:-82515296 | MS.gene71642:CDS |
| AGGTAAAGTCGTTGGAGGAG+TGG | 0.549356 | 1.4:+82518427 | None:intergenic |
| ACGACATTAAATTGATCAGA+TGG | 0.549624 | 1.4:+82518117 | None:intergenic |
| CTTGGAGGTAAAGTCGTTGG+AGG | 0.551575 | 1.4:+82518422 | None:intergenic |
| ATATGGTTTAGTTACCTTGG+AGG | 0.551882 | 1.4:+82518407 | None:intergenic |
| CAGAAGCGAGAACAAGAAAG+GGG | 0.552961 | 1.4:+82518454 | None:intergenic |
| GAAATGAGTAACTTGGAAAG+AGG | 0.557837 | 1.4:+82518075 | None:intergenic |
| TTTGTAGGATTTGAGCGAAG+AGG | 0.563546 | 1.4:+82518486 | None:intergenic |
| ATAGCATCAGCTGTAGTTGG+CGG | 0.566459 | 1.4:+82518174 | None:intergenic |
| GGATGATGTCCTTAAGCTCA+GGG | 0.566566 | 1.4:+82515404 | None:intergenic |
| GAAGCGATGGAGAGGAAGAG+AGG | 0.566583 | 1.4:+82518536 | None:intergenic |
| GCGATGGAGAGGAAGAGAGG+AGG | 0.566927 | 1.4:+82518539 | None:intergenic |
| GGACCATTTCTGGTATGTTG+GGG | 0.572912 | 1.4:-82518146 | MS.gene71642:CDS |
| GAGGGACGGAAGCGATGGAG+AGG | 0.573663 | 1.4:+82518528 | None:intergenic |
| TGAGTATCGAATGGAATTGG+CGG | 0.578665 | 1.4:-82514926 | MS.gene71642:CDS |
| GACGTTGACATTCAAGACCT+TGG | 0.582269 | 1.4:-82517068 | MS.gene71642:CDS |
| ACATCAGAGAATGCAACAGT+TGG | 0.582607 | 1.4:-82515319 | MS.gene71642:CDS |
| GAAATACTGACCAAAAGAGC+AGG | 0.586296 | 1.4:+82515197 | None:intergenic |
| CAGTTGGATCAGCAAATGCT+GGG | 0.591873 | 1.4:-82515303 | MS.gene71642:CDS |
| CCAATTCCATTCGATACTCA+AGG | 0.592985 | 1.4:+82514929 | None:intergenic |
| ATTCTCAGCAACATTTGTCA+AGG | 0.595786 | 1.4:+82514894 | None:intergenic |
| AGGAGCTACATGAAGTGAAG+AGG | 0.597801 | 1.4:-82516338 | MS.gene71642:CDS |
| CTCCAACGACTTTACCTCCA+AGG | 0.598406 | 1.4:-82518421 | MS.gene71642:intron |
| TAGAGGCCTTGAGTATCGAA+TGG | 0.598996 | 1.4:-82514935 | MS.gene71642:CDS |
| GCGAAGAGGAGAGAAAGAGA+AGG | 0.603411 | 1.4:+82518500 | None:intergenic |
| TGAATGTCAACGTCCTCGTG+AGG | 0.617337 | 1.4:+82517077 | None:intergenic |
| TACTGACCAAAAGAGCAGGC+GGG | 0.622149 | 1.4:+82515201 | None:intergenic |
| ATCATCCTATCTGTTGTCCA+CGG | 0.630634 | 1.4:-82515388 | MS.gene71642:CDS |
| AAAGGGTGGCAAGGAGACCG+TGG | 0.634725 | 1.4:+82515371 | None:intergenic |
| TCTTAGGAGAAAGGGTGGCA+AGG | 0.640314 | 1.4:+82515362 | None:intergenic |
| CAGAGATCTTGAGAAGCCGA+AGG | 0.645044 | 1.4:-82517198 | MS.gene71642:CDS |
| ATACTGACCAAAAGAGCAGG+CGG | 0.646205 | 1.4:+82515200 | None:intergenic |
| CGAAGTTGAAAAGCCTCACG+AGG | 0.673411 | 1.4:-82517090 | MS.gene71642:CDS |
| ATGCATCTTAGGAGAAAGGG+TGG | 0.676044 | 1.4:+82515357 | None:intergenic |
| CTTCGGCAGATATTTGACCA+AGG | 0.705206 | 1.4:+82517051 | None:intergenic |
| TAACATTTACACTGTCACGT+AGG | 0.718366 | 1.4:+82517144 | None:intergenic |
| TGGGAATGAGGATTGTGCTG+AGG | 0.725822 | 1.4:-82515284 | MS.gene71642:CDS |
| AGAAGCGAGAACAAGAAAGG+GGG | 0.727238 | 1.4:+82518455 | None:intergenic |
| GATGATGTCCTTAAGCTCAG+GGG | 0.768594 | 1.4:+82515405 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTAAAATTTCATTA+TGG | + | chr1.4:82515717-82515736 | None:intergenic | 10.0% |
| !! | AATACATAGTAATATAAAAT+AGG | + | chr1.4:82517937-82517956 | None:intergenic | 10.0% |
| !! | AATTGTTAAAATTTCATTAT+GGG | + | chr1.4:82515716-82515735 | None:intergenic | 10.0% |
| !! | TTCAAAAGAATTAAAAATTT+GGG | + | chr1.4:82516082-82516101 | None:intergenic | 10.0% |
| !!! | GATTTTATAAATAATGATTT+TGG | - | chr1.4:82517430-82517449 | MS.gene71642:intron | 10.0% |
| !! | ATTATATAGCATATAAAGAA+AGG | + | chr1.4:82517262-82517281 | None:intergenic | 15.0% |
| !! | CTTCAAAAGAATTAAAAATT+TGG | + | chr1.4:82516083-82516102 | None:intergenic | 15.0% |
| !! | GCTTTAATAAATCATATAAA+GGG | + | chr1.4:82517525-82517544 | None:intergenic | 15.0% |
| !! | TCAAAAGAATTAAAAATTTG+GGG | + | chr1.4:82516081-82516100 | None:intergenic | 15.0% |
| !! | TTAGTGTTTAAATGAATATT+TGG | + | chr1.4:82517857-82517876 | None:intergenic | 15.0% |
| !!! | AGCTTTAATAAATCATATAA+AGG | + | chr1.4:82517526-82517545 | None:intergenic | 15.0% |
| !!! | ATTTTAAGAATTTTATGCAT+TGG | - | chr1.4:82516494-82516513 | MS.gene71642:intron | 15.0% |
| !!! | GAACATTTAAGATTTAATAA+TGG | - | chr1.4:82518319-82518338 | MS.gene71642:intron | 15.0% |
| !!! | TTATATTTTGTATTTGTGTA+AGG | - | chr1.4:82517375-82517394 | MS.gene71642:intron | 15.0% |
| !! | AAACTATAAGAGAAACTATT+AGG | - | chr1.4:82516762-82516781 | MS.gene71642:intron | 20.0% |
| !! | AAATAAATGGACAATCTATT+CGG | - | chr1.4:82515977-82515996 | MS.gene71642:intron | 20.0% |
| !! | AATAAATAGAGTAGATCATA+TGG | - | chr1.4:82516700-82516719 | MS.gene71642:intron | 20.0% |
| !! | ACACAAATACAAAATATAAC+AGG | + | chr1.4:82517374-82517393 | None:intergenic | 20.0% |
| !! | AGATTTATAGATTAATGAGT+TGG | - | chr1.4:82516787-82516806 | MS.gene71642:intron | 20.0% |
| !! | ATAAAATTCTTAAAATGCCA+AGG | + | chr1.4:82516490-82516509 | None:intergenic | 20.0% |
| !! | ATATGATTTATTAAAGCTGA+GGG | - | chr1.4:82517528-82517547 | MS.gene71642:intron | 20.0% |
| !! | GATTGTCCATTTATTTATTT+AGG | + | chr1.4:82515973-82515992 | None:intergenic | 20.0% |
| !! | TATATGATTTATTAAAGCTG+AGG | - | chr1.4:82517527-82517546 | MS.gene71642:intron | 20.0% |
| !! | TTGTGATAAAAAAAACAGTA+TGG | - | chr1.4:82516823-82516842 | MS.gene71642:intron | 20.0% |
| !!! | GTTTCTCTTATAGTTTTTTT+AGG | + | chr1.4:82516758-82516777 | None:intergenic | 20.0% |
| !!! | TCTATAGTATACCTTTTTTA+TGG | + | chr1.4:82516454-82516473 | None:intergenic | 20.0% |
| !!! | TTTATATCAGTGTTTTAGTT+GGG | - | chr1.4:82517965-82517984 | MS.gene71642:intron | 20.0% |
| ! | AAATATTGCACAGTGTAATT+TGG | - | chr1.4:82515614-82515633 | MS.gene71642:intron | 25.0% |
| ! | AAATTACACTGTGCAATATT+TGG | + | chr1.4:82515615-82515634 | None:intergenic | 25.0% |
| ! | AACACAAAATCTTCCTAATA+TGG | + | chr1.4:82515855-82515874 | None:intergenic | 25.0% |
| ! | AAGTAATGTTTATCCAAATG+GGG | - | chr1.4:82516128-82516147 | MS.gene71642:intron | 25.0% |
| ! | ACACAAAATCTTCCTAATAT+GGG | + | chr1.4:82515854-82515873 | None:intergenic | 25.0% |
| ! | ACACAGCCTAAATAAATAAA+TGG | - | chr1.4:82515964-82515983 | MS.gene71642:intron | 25.0% |
| ! | AGAAATATATTCTTGAGCTT+CGG | + | chr1.4:82516409-82516428 | None:intergenic | 25.0% |
| ! | AGAAGAAAAGAATGATTTAC+TGG | - | chr1.4:82517160-82517179 | MS.gene71642:CDS | 25.0% |
| ! | ATATAGCATATAAAGAAAGG+TGG | + | chr1.4:82517259-82517278 | None:intergenic | 25.0% |
| ! | ATTCAACAGTAGTAGTAATA+TGG | + | chr1.4:82515053-82515072 | None:intergenic | 25.0% |
| ! | CAAGTAATGTTTATCCAAAT+GGG | - | chr1.4:82516127-82516146 | MS.gene71642:intron | 25.0% |
| ! | TATGATTTATTAAAGCTGAG+GGG | - | chr1.4:82517529-82517548 | MS.gene71642:intron | 25.0% |
| ! | TATTTGGATTTGTCACATAT+TGG | + | chr1.4:82517841-82517860 | None:intergenic | 25.0% |
| ! | TGAATATTACTCACATCTAA+AGG | + | chr1.4:82515236-82515255 | None:intergenic | 25.0% |
| ! | TTTGTAGAAATCTGCTTTAT+CGG | - | chr1.4:82515190-82515209 | MS.gene71642:intron | 25.0% |
| !! | AAATTTTCATGTTCTTGCTA+TGG | - | chr1.4:82515447-82515466 | MS.gene71642:intron | 25.0% |
| !! | AGCCTTTTATATCATTAACT+CGG | - | chr1.4:82518206-82518225 | MS.gene71642:CDS | 25.0% |
| !! | CAAACAAGAATTTTCACAAA+AGG | + | chr1.4:82517221-82517240 | None:intergenic | 25.0% |
| !! | TTTAAGGTTATGTACTAATG+TGG | - | chr1.4:82518398-82518417 | MS.gene71642:intron | 25.0% |
| !! | TTTTTATCACAAGCCATATT+TGG | + | chr1.4:82516815-82516834 | None:intergenic | 25.0% |
| !!! | AGTGTAAATGTTATTGACTT+TGG | - | chr1.4:82516306-82516325 | MS.gene71642:CDS | 25.0% |
| !!! | GTTTATATCAGTGTTTTAGT+TGG | - | chr1.4:82517964-82517983 | MS.gene71642:intron | 25.0% |
| !!! | TAAGAAGGAATTGACTTTTT+AGG | - | chr1.4:82515103-82515122 | MS.gene71642:intron | 25.0% |
| !!! | TGACTTTTTAGGTTCATTAA+CGG | - | chr1.4:82515114-82515133 | MS.gene71642:intron | 25.0% |
| AAATAGAGTAGATCATATGG+AGG | - | chr1.4:82516703-82516722 | MS.gene71642:intron | 30.0% | |
| AACACCTAAAGTAGAAAAGA+TGG | - | chr1.4:82516622-82516641 | MS.gene71642:intron | 30.0% | |
| AACTACAAGATAACAAACCA+AGG | + | chr1.4:82517320-82517339 | None:intergenic | 30.0% | |
| AATTCTTAAAATGCCAAGGA+AGG | + | chr1.4:82516486-82516505 | None:intergenic | 30.0% | |
| ACGACATTAAATTGATCAGA+TGG | + | chr1.4:82515326-82515345 | None:intergenic | 30.0% | |
| AGAAAACGAGTTCAATGTAA+CGG | + | chr1.4:82517043-82517062 | None:intergenic | 30.0% | |
| AGTAATGTTTATCCAAATGG+GGG | - | chr1.4:82516129-82516148 | MS.gene71642:intron | 30.0% | |
| ATAATAGTCCCCTAACTTAA+AGG | + | chr1.4:82515903-82515922 | None:intergenic | 30.0% | |
| ATGATACTTGAAAGATGATC+TGG | - | chr1.4:82518370-82518389 | MS.gene71642:intron | 30.0% | |
| ATGTTGCCAACATAAAACTT+TGG | + | chr1.4:82516582-82516601 | None:intergenic | 30.0% | |
| CACAAAATCTTCCTAATATG+GGG | + | chr1.4:82515853-82515872 | None:intergenic | 30.0% | |
| CATTAGCCATTGTTAGTTAT+TGG | - | chr1.4:82516555-82516574 | MS.gene71642:intron | 30.0% | |
| CATTGAAGAAATGAGTAACT+TGG | + | chr1.4:82515375-82515394 | None:intergenic | 30.0% | |
| CCAAGTAATGTTTATCCAAA+TGG | - | chr1.4:82516126-82516145 | MS.gene71642:intron | 30.0% | |
| CCATTTGGATAAACATTACT+TGG | + | chr1.4:82516129-82516148 | None:intergenic | 30.0% | |
| GTAATATGGTTTAGTTACCT+TGG | + | chr1.4:82515039-82515058 | None:intergenic | 30.0% | |
| TAAAGAAAGGTGGTTGTAAA+TGG | + | chr1.4:82517249-82517268 | None:intergenic | 30.0% | |
| TACAGAATGTTGTCAAATTG+CGG | - | chr1.4:82515671-82515690 | MS.gene71642:intron | 30.0% | |
| TATCTGTGCTTATTAACCAT+TGG | - | chr1.4:82517455-82517474 | MS.gene71642:intron | 30.0% | |
| TCAATTTAATGTCGTTGTTG+AGG | - | chr1.4:82515331-82515350 | MS.gene71642:CDS | 30.0% | |
| TCATTTCTTCAATGATGACT+GGG | - | chr1.4:82515381-82515400 | MS.gene71642:CDS | 30.0% | |
| TCCCGAGTTAATGATATAAA+AGG | + | chr1.4:82518211-82518230 | None:intergenic | 30.0% | |
| TCGATCATGTGATTATAAGA+AGG | - | chr1.4:82515088-82515107 | MS.gene71642:intron | 30.0% | |
| TCGTTTGTCTTCCATAAAAA+AGG | - | chr1.4:82516440-82516459 | MS.gene71642:intron | 30.0% | |
| TTTGATTGTCACATTTCTCA+TGG | - | chr1.4:82516925-82516944 | MS.gene71642:intron | 30.0% | |
| TTTGGACCAATAACTAACAA+TGG | + | chr1.4:82516564-82516583 | None:intergenic | 30.0% | |
| ! | ATAAACCCTACCTTTAAGTT+AGG | - | chr1.4:82515890-82515909 | MS.gene71642:intron | 30.0% |
| ! | GCCTTTTATATCATTAACTC+GGG | - | chr1.4:82518207-82518226 | MS.gene71642:CDS | 30.0% |
| ! | TAAACCCTACCTTTAAGTTA+GGG | - | chr1.4:82515891-82515910 | MS.gene71642:intron | 30.0% |
| ! | TAATGAGTTGGATCCAAATA+TGG | - | chr1.4:82516799-82516818 | MS.gene71642:intron | 30.0% |
| ! | TGGAATTTTCATCCTAATGA+TGG | + | chr1.4:82517821-82517840 | None:intergenic | 30.0% |
| ! | TGTTTCTTTTCCTTCCTTTT+TGG | - | chr1.4:82517069-82517088 | MS.gene71642:CDS | 30.0% |
| ! | TTGTATCCTTTTCCATCATT+AGG | - | chr1.4:82517806-82517825 | MS.gene71642:intron | 30.0% |
| ! | TTTCATCCTAATGATGGAAA+AGG | + | chr1.4:82517815-82517834 | None:intergenic | 30.0% |
| !! | AAGCTTTATTCATGTACTAC+AGG | - | chr1.4:82516160-82516179 | MS.gene71642:intron | 30.0% |
| !! | AATTGCCATGCATTTTAACA+TGG | - | chr1.4:82517279-82517298 | MS.gene71642:intron | 30.0% |
| !! | AGATGATCTGGAATGTTTTA+AGG | - | chr1.4:82518382-82518401 | MS.gene71642:intron | 30.0% |
| !! | ATTGGTCCAAAGTTTTATGT+TGG | - | chr1.4:82516573-82516592 | MS.gene71642:intron | 30.0% |
| !! | TAGAAAAGATGGTGGAAAAT+AGG | - | chr1.4:82516633-82516652 | MS.gene71642:intron | 30.0% |
| !!! | ATTTTTGAGTTCCCCATATT+AGG | - | chr1.4:82515839-82515858 | MS.gene71642:intron | 30.0% |
| !!! | GACTTTTTAGGTTCATTAAC+GGG | - | chr1.4:82515115-82515134 | MS.gene71642:intron | 30.0% |
| AAATCATATAAAGGGCAACC+TGG | + | chr1.4:82517712-82517731 | None:intergenic | 35.0% | |
| AACATTAGAGAGAGAGAACT+GGG | - | chr1.4:82516597-82516616 | MS.gene71642:intron | 35.0% | |
| AACTTAGTACTTTCTGCCTT+CGG | + | chr1.4:82516261-82516280 | None:intergenic | 35.0% | |
| AATCAGATTACAAGAGGTAG+AGG | - | chr1.4:82516728-82516747 | MS.gene71642:intron | 35.0% | |
| ACCTAAAGTAGAAAAGATGG+TGG | - | chr1.4:82516625-82516644 | MS.gene71642:intron | 35.0% | |
| ACGAGGAAAAAAACTACCAA+TGG | + | chr1.4:82517474-82517493 | None:intergenic | 35.0% | |
| ACTCAAAAATGTATTGGAGG+AGG | + | chr1.4:82515829-82515848 | None:intergenic | 35.0% | |
| AGCTAATCGGATTGTTATCA+TGG | - | chr1.4:82515470-82515489 | MS.gene71642:intron | 35.0% | |
| ATATGGTTTAGTTACCTTGG+AGG | + | chr1.4:82515036-82515055 | None:intergenic | 35.0% | |
| ATTCTCAGCAACATTTGTCA+AGG | + | chr1.4:82518549-82518568 | None:intergenic | 35.0% | |
| CAGTTATCTCAATTGCAGTT+AGG | - | chr1.4:82517014-82517033 | MS.gene71642:CDS | 35.0% | |
| CGTTCTCTACAAAACTAATG+TGG | + | chr1.4:82515527-82515546 | None:intergenic | 35.0% | |
| CTCAAAAATGTATTGGAGGA+GGG | + | chr1.4:82515828-82515847 | None:intergenic | 35.0% | |
| CTCATTTCTTCAATGATGAC+TGG | - | chr1.4:82515380-82515399 | MS.gene71642:CDS | 35.0% | |
| CTTCAAATGCAGCAATTTGT+TGG | - | chr1.4:82517137-82517156 | MS.gene71642:CDS | 35.0% | |
| GAAACGTGAAATATATCACG+AGG | + | chr1.4:82517491-82517510 | None:intergenic | 35.0% | |
| GAAATGAGTAACTTGGAAAG+AGG | + | chr1.4:82515368-82515387 | None:intergenic | 35.0% | |
| GAACGAGAAGAAAATGCTTA+TGG | - | chr1.4:82515542-82515561 | MS.gene71642:intron | 35.0% | |
| GAGGATAATCAGATTACAAG+AGG | - | chr1.4:82516722-82516741 | MS.gene71642:intron | 35.0% | |
| GGAACTCAAAAATGTATTGG+AGG | + | chr1.4:82515832-82515851 | None:intergenic | 35.0% | |
| TAACATGGTGCAATTCTATC+TGG | - | chr1.4:82517294-82517313 | MS.gene71642:intron | 35.0% | |
| TAACATTTACACTGTCACGT+AGG | + | chr1.4:82516299-82516318 | None:intergenic | 35.0% | |
| TAGAATTGAAGATCCTTCCT+TGG | - | chr1.4:82516470-82516489 | MS.gene71642:intron | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | - | chr1.4:82517624-82517643 | MS.gene71642:intron | 35.0% | |
| TGAATGCATCTTAGGAGAAA+GGG | + | chr1.4:82518089-82518108 | None:intergenic | 35.0% | |
| TGGGGAACTCAAAAATGTAT+TGG | + | chr1.4:82515835-82515854 | None:intergenic | 35.0% | |
| TGTTGACATGTTGTCAATCT+CGG | + | chr1.4:82515755-82515774 | None:intergenic | 35.0% | |
| TTGAATGCATCTTAGGAGAA+AGG | + | chr1.4:82518090-82518109 | None:intergenic | 35.0% | |
| TTGACAAATGTTGCTGAGAA+TGG | - | chr1.4:82518548-82518567 | MS.gene71642:CDS | 35.0% | |
| TTGCACCATGTTAAAATGCA+TGG | + | chr1.4:82517287-82517306 | None:intergenic | 35.0% | |
| TTGTATTTGTGTAAGGTGTG+TGG | - | chr1.4:82517382-82517401 | MS.gene71642:intron | 35.0% | |
| ! | AAACCCTACCTTTAAGTTAG+GGG | - | chr1.4:82515892-82515911 | MS.gene71642:intron | 35.0% |
| ! | ATGGTCTCTAATTTGTCTGT+TGG | - | chr1.4:82516973-82516992 | MS.gene71642:intron | 35.0% |
| ! | TCCACCATCTTTTCTACTTT+AGG | + | chr1.4:82516629-82516648 | None:intergenic | 35.0% |
| ! | TCCTTTTTGGACACTTCTAA+AGG | - | chr1.4:82517082-82517101 | MS.gene71642:CDS | 35.0% |
| !! | TCCTTTAGAAGTGTCCAAAA+AGG | + | chr1.4:82517086-82517105 | None:intergenic | 35.0% |
| !! | TTAGAAGTGTCCAAAAAGGA+AGG | + | chr1.4:82517082-82517101 | None:intergenic | 35.0% |
| !!! | CTGTGTTTTTGAGTTTAGGA+GGG | + | chr1.4:82515950-82515969 | None:intergenic | 35.0% |
| !!! | TAGGCTGTGTTTTTGAGTTT+AGG | + | chr1.4:82515954-82515973 | None:intergenic | 35.0% |
| !!! | TGTGTTTTTGAGTTTAGGAG+GGG | + | chr1.4:82515949-82515968 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | + | chr1.4:82517625-82517644 | None:intergenic | 35.0% |
| AAAATAGGCTCAGGTGGTTT+GGG | - | chr1.4:82516648-82516667 | MS.gene71642:intron | 40.0% | |
| AAGCTCAGGGGATGTAAATT+CGG | + | chr1.4:82518026-82518045 | None:intergenic | 40.0% | |
| AATCTATTCGGAGAATGGAG+AGG | - | chr1.4:82515989-82516008 | MS.gene71642:intron | 40.0% | |
| ACAAAAGGCAAAACCTGTTC+AGG | + | chr1.4:82517206-82517225 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr1.4:82517618-82517637 | MS.gene71642:intron | 40.0% | |
| ACATCAGAGAATGCAACAGT+TGG | - | chr1.4:82518121-82518140 | MS.gene71642:CDS | 40.0% | |
| ACATTAGAGAGAGAGAACTG+GGG | - | chr1.4:82516598-82516617 | MS.gene71642:intron | 40.0% | |
| AGTCCCCTAACTTAAAGGTA+GGG | + | chr1.4:82515898-82515917 | None:intergenic | 40.0% | |
| AGTTCAGAAACCAGATCAAC+AGG | + | chr1.4:82518426-82518445 | None:intergenic | 40.0% | |
| ATAATCAACACCGAAGGATG+AGG | + | chr1.4:82516955-82516974 | None:intergenic | 40.0% | |
| ATAATGCGTTGAATCGTGTG+TGG | - | chr1.4:82516521-82516540 | MS.gene71642:intron | 40.0% | |
| ATCATCCTATCTGTTGTCCA+CGG | - | chr1.4:82518052-82518071 | MS.gene71642:intron | 40.0% | |
| ATTTACATCCCCTGAGCTTA+AGG | - | chr1.4:82518027-82518046 | MS.gene71642:intron | 40.0% | |
| CAACATTAGAGAGAGAGAAC+TGG | - | chr1.4:82516596-82516615 | MS.gene71642:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | - | chr1.4:82517619-82517638 | MS.gene71642:intron | 40.0% | |
| CCAATTCCATTCGATACTCA+AGG | + | chr1.4:82518514-82518533 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr1.4:82517650-82517669 | MS.gene71642:intron | 40.0% | |
| CTACAGCTGATGCTATGAAA+AGG | - | chr1.4:82515273-82515292 | MS.gene71642:CDS | 40.0% | |
| GAAATACTGACCAAAAGAGC+AGG | + | chr1.4:82518246-82518265 | None:intergenic | 40.0% | |
| GCATGTAGAGATAAGACTTG+TGG | - | chr1.4:82516670-82516689 | MS.gene71642:intron | 40.0% | |
| GCATTCTCTGATGTAGTAGA+GGG | + | chr1.4:82518115-82518134 | None:intergenic | 40.0% | |
| GCTATGAAAAGGACCATTTC+TGG | - | chr1.4:82515284-82515303 | MS.gene71642:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | - | chr1.4:82517574-82517593 | MS.gene71642:intron | 40.0% | |
| TAGTCCCCTAACTTAAAGGT+AGG | + | chr1.4:82515899-82515918 | None:intergenic | 40.0% | |
| TATAACCAACCCTGCTTAGT+TGG | - | chr1.4:82517751-82517770 | MS.gene71642:intron | 40.0% | |
| TGCATTCTCTGATGTAGTAG+AGG | + | chr1.4:82518116-82518135 | None:intergenic | 40.0% | |
| TGGACAATCTATTCGGAGAA+TGG | - | chr1.4:82515984-82516003 | MS.gene71642:intron | 40.0% | |
| TTCATAGCATCAGCTGTAGT+TGG | + | chr1.4:82515272-82515291 | None:intergenic | 40.0% | |
| TTTGTAGGATTTGAGCGAAG+AGG | + | chr1.4:82514957-82514976 | None:intergenic | 40.0% | |
| ! | AAGGGGGAACGATATTTTGT+AGG | + | chr1.4:82514972-82514991 | None:intergenic | 40.0% |
| ! | AGAGTCTTTTCCAACTAAGC+AGG | + | chr1.4:82517764-82517783 | None:intergenic | 40.0% |
| ! | GAGTCTTTTCCAACTAAGCA+GGG | + | chr1.4:82517763-82517782 | None:intergenic | 40.0% |
| ! | GTTCTTGCTATGGAGCTAAT+CGG | - | chr1.4:82515457-82515476 | MS.gene71642:intron | 40.0% |
| !! | AAGGACCATTTCTGGTATGT+TGG | - | chr1.4:82515292-82515311 | MS.gene71642:CDS | 40.0% |
| !! | AGGACCATTTCTGGTATGTT+GGG | - | chr1.4:82515293-82515312 | MS.gene71642:CDS | 40.0% |
| !! | CCTTGAGTATCGAATGGAAT+TGG | - | chr1.4:82518511-82518530 | MS.gene71642:CDS | 40.0% |
| !! | GTGACATTATTAGCTTGTGC+AGG | - | chr1.4:82517911-82517930 | MS.gene71642:intron | 40.0% |
| !! | TCATCCTTCGGTGTTGATTA+TGG | - | chr1.4:82516954-82516973 | MS.gene71642:intron | 40.0% |
| !! | TGAGTATCGAATGGAATTGG+CGG | - | chr1.4:82518514-82518533 | MS.gene71642:CDS | 40.0% |
| !! | TGCTGAGTATAGGCTTTGTT+TGG | - | chr1.4:82516197-82516216 | MS.gene71642:intron | 40.0% |
| !!! | GCTGTGTTTTTGAGTTTAGG+AGG | + | chr1.4:82515951-82515970 | None:intergenic | 40.0% |
| ACAGTTGGATCAGCAAATGC+TGG | - | chr1.4:82518136-82518155 | MS.gene71642:CDS | 45.0% | |
| AGAAGCGAGAACAAGAAAGG+GGG | + | chr1.4:82514988-82515007 | None:intergenic | 45.0% | |
| AGAGAAAGAGAAGGAAGGAG+AGG | + | chr1.4:82514934-82514953 | None:intergenic | 45.0% | |
| AGAGGAGAGAAAGAGAAGGA+AGG | + | chr1.4:82514939-82514958 | None:intergenic | 45.0% | |
| AGGAGCTACATGAAGTGAAG+AGG | - | chr1.4:82517102-82517121 | MS.gene71642:CDS | 45.0% | |
| AGGATGATGTCCTTAAGCTC+AGG | + | chr1.4:82518040-82518059 | None:intergenic | 45.0% | |
| ATACTGACCAAAAGAGCAGG+CGG | + | chr1.4:82518243-82518262 | None:intergenic | 45.0% | |
| ATAGCATCAGCTGTAGTTGG+CGG | + | chr1.4:82515269-82515288 | None:intergenic | 45.0% | |
| ATCAGCAAATGCTGGGAATG+AGG | - | chr1.4:82518144-82518163 | MS.gene71642:CDS | 45.0% | |
| ATGCATCTTAGGAGAAAGGG+TGG | + | chr1.4:82518086-82518105 | None:intergenic | 45.0% | |
| ATGTCGTTGTTGAGGCTTTG+TGG | - | chr1.4:82515339-82515358 | MS.gene71642:CDS | 45.0% | |
| CAACCCCAACATACCAGAAA+TGG | + | chr1.4:82515300-82515319 | None:intergenic | 45.0% | |
| CAGAAGCGAGAACAAGAAAG+GGG | + | chr1.4:82514989-82515008 | None:intergenic | 45.0% | |
| CAGTTGGATCAGCAAATGCT+GGG | - | chr1.4:82518137-82518156 | MS.gene71642:CDS | 45.0% | |
| CATTGCGCAATGCTGAGTAT+AGG | - | chr1.4:82516187-82516206 | MS.gene71642:intron | 45.0% | |
| CTGTTGGGACACTATCTTAG+AGG | - | chr1.4:82518488-82518507 | MS.gene71642:CDS | 45.0% | |
| CTTCGGCAGATATTTGACCA+AGG | + | chr1.4:82516392-82516411 | None:intergenic | 45.0% | |
| GAAAATAGGCTCAGGTGGTT+TGG | - | chr1.4:82516647-82516666 | MS.gene71642:intron | 45.0% | |
| GACGTTGACATTCAAGACCT+TGG | - | chr1.4:82516372-82516391 | MS.gene71642:intron | 45.0% | |
| GAGAAAGAGAAGGAAGGAGA+GGG | + | chr1.4:82514933-82514952 | None:intergenic | 45.0% | |
| GAGACCATAATCAACACCGA+AGG | + | chr1.4:82516961-82516980 | None:intergenic | 45.0% | |
| GATGATGTCCTTAAGCTCAG+GGG | + | chr1.4:82518038-82518057 | None:intergenic | 45.0% | |
| GCAGAAGCGAGAACAAGAAA+GGG | + | chr1.4:82514990-82515009 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr1.4:82517649-82517668 | MS.gene71642:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr1.4:82517646-82517665 | MS.gene71642:intron | 45.0% | |
| GCTTCTCATATTCCCCCATT+TGG | + | chr1.4:82516144-82516163 | None:intergenic | 45.0% | |
| GGATGATGTCCTTAAGCTCA+GGG | + | chr1.4:82518039-82518058 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | - | chr1.4:82517580-82517599 | MS.gene71642:intron | 45.0% | |
| TACCTTGGAGGTAAAGTCGT+TGG | + | chr1.4:82515024-82515043 | None:intergenic | 45.0% | |
| TCATGGTATGCCTCATCCTT+CGG | - | chr1.4:82516942-82516961 | MS.gene71642:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | - | chr1.4:82517581-82517600 | MS.gene71642:intron | 45.0% | |
| TGCAGAAGCGAGAACAAGAA+AGG | + | chr1.4:82514991-82515010 | None:intergenic | 45.0% | |
| TTAAAGCTGAGGGGTAACCT+TGG | - | chr1.4:82517538-82517557 | MS.gene71642:intron | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | + | chr1.4:82516872-82516891 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | + | chr1.4:82516873-82516892 | None:intergenic | 45.0% |
| ! | CTCGTGAGGCTTTTCAACTT+CGG | + | chr1.4:82516352-82516371 | None:intergenic | 45.0% |
| ! | CTTTTCCAACTAAGCAGGGT+TGG | + | chr1.4:82517759-82517778 | None:intergenic | 45.0% |
| ! | TGTATTGGAGGAGGGTTTTG+AGG | + | chr1.4:82515820-82515839 | None:intergenic | 45.0% |
| ! | TGTCGTTGTTGAGGCTTTGT+GGG | - | chr1.4:82515340-82515359 | MS.gene71642:CDS | 45.0% |
| ! | TGTGCATGTTGCTATTGAGC+AGG | - | chr1.4:82517988-82518007 | MS.gene71642:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr1.4:82517614-82517633 | None:intergenic | 45.0% |
| !! | AGATGGTGGAAAATAGGCTC+AGG | - | chr1.4:82516639-82516658 | MS.gene71642:intron | 45.0% |
| !! | GAGGGCTTTGAATGCATCTT+AGG | + | chr1.4:82518097-82518116 | None:intergenic | 45.0% |
| !! | GGACCATTTCTGGTATGTTG+GGG | - | chr1.4:82515294-82515313 | MS.gene71642:CDS | 45.0% |
| !! | GTATTGGAGGAGGGTTTTGA+GGG | + | chr1.4:82515819-82515838 | None:intergenic | 45.0% |
| !! | TAGAGGCCTTGAGTATCGAA+TGG | - | chr1.4:82518505-82518524 | MS.gene71642:CDS | 45.0% |
| AAGAGAAGGAAGGAGAGGGA+CGG | + | chr1.4:82514929-82514948 | None:intergenic | 50.0% | |
| ACTAAGTGGGGTCGACTACA+AGG | + | chr1.4:82516860-82516879 | None:intergenic | 50.0% | |
| AGGTAAAGTCGTTGGAGGAG+TGG | + | chr1.4:82515016-82515035 | None:intergenic | 50.0% | |
| AGTTTAGGAGGGGACGACTT+TGG | + | chr1.4:82515939-82515958 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr1.4:82517558-82517577 | None:intergenic | 50.0% | |
| CAGAGATCTTGAGAAGCCGA+AGG | - | chr1.4:82516242-82516261 | MS.gene71642:intron | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | - | chr1.4:82516871-82516890 | MS.gene71642:intron | 50.0% | |
| CGAAGTTGAAAAGCCTCACG+AGG | - | chr1.4:82516350-82516369 | MS.gene71642:intron | 50.0% | |
| CTCCAACGACTTTACCTCCA+AGG | - | chr1.4:82515019-82515038 | MS.gene71642:intron | 50.0% | |
| CTTAGTGGGATAAGGCTTGG+TGG | - | chr1.4:82516874-82516893 | MS.gene71642:intron | 50.0% | |
| CTTGGAGGTAAAGTCGTTGG+AGG | + | chr1.4:82515021-82515040 | None:intergenic | 50.0% | |
| GAGATCGCTTCAACCTGAAC+AGG | - | chr1.4:82517190-82517209 | MS.gene71642:CDS | 50.0% | |
| GCGAAGAGGAGAGAAAGAGA+AGG | + | chr1.4:82514943-82514962 | None:intergenic | 50.0% | |
| GGTAAAGTCGTTGGAGGAGT+GGG | + | chr1.4:82515015-82515034 | None:intergenic | 50.0% | |
| GGTGCAATTCTATCTGGCCT+TGG | - | chr1.4:82517300-82517319 | MS.gene71642:intron | 50.0% | |
| GTTTAGGAGGGGACGACTTT+GGG | + | chr1.4:82515938-82515957 | None:intergenic | 50.0% | |
| TAATGTGGCGCCTGTTGATC+TGG | - | chr1.4:82518413-82518432 | MS.gene71642:intron | 50.0% | |
| TACTGACCAAAAGAGCAGGC+GGG | + | chr1.4:82518242-82518261 | None:intergenic | 50.0% | |
| TCTTAGGAGAAAGGGTGGCA+AGG | + | chr1.4:82518081-82518100 | None:intergenic | 50.0% | |
| TGAATGTCAACGTCCTCGTG+AGG | + | chr1.4:82516366-82516385 | None:intergenic | 50.0% | |
| TGGGAATGAGGATTGTGCTG+AGG | - | chr1.4:82518156-82518175 | MS.gene71642:CDS | 50.0% | |
| TGGTGGAAAATAGGCTCAGG+TGG | - | chr1.4:82516642-82516661 | MS.gene71642:intron | 50.0% | |
| TGTAGTCGACCCCACTTAGT+GGG | - | chr1.4:82516860-82516879 | MS.gene71642:intron | 50.0% | |
| TTGTAGTCGACCCCACTTAG+TGG | - | chr1.4:82516859-82516878 | MS.gene71642:intron | 50.0% | |
| ! | AGGGGACGACTTTGGGAAAA+AGG | + | chr1.4:82515931-82515950 | None:intergenic | 50.0% |
| ! | CCAAGCCTTATCCCACTAAG+TGG | + | chr1.4:82516874-82516893 | None:intergenic | 50.0% |
| AACAGCATGCACCTTCGAGG+GGG | + | chr1.4:82518473-82518492 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr1.4:82517593-82517612 | MS.gene71642:intron | 55.0% | |
| ATGGAGAGGAAGAGAGGAGG+AGG | + | chr1.4:82514901-82514920 | None:intergenic | 55.0% | |
| CAACAGCATGCACCTTCGAG+GGG | + | chr1.4:82518474-82518493 | None:intergenic | 55.0% | |
| CCAACAGCATGCACCTTCGA+GGG | + | chr1.4:82518475-82518494 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | - | chr1.4:82516866-82516885 | MS.gene71642:intron | 55.0% | |
| GAAGCGATGGAGAGGAAGAG+AGG | + | chr1.4:82514907-82514926 | None:intergenic | 55.0% | |
| GGAGACCGTGGACAACAGAT+AGG | + | chr1.4:82518060-82518079 | None:intergenic | 55.0% | |
| TTCTCAATGACCCCCCTCGA+AGG | - | chr1.4:82518459-82518478 | MS.gene71642:CDS | 55.0% | |
| ! | ATCTTGCCCGCCTGCTCTTT+TGG | - | chr1.4:82518233-82518252 | MS.gene71642:CDS | 55.0% |
| ! | CCTCGAAGGTGCATGCTGTT+GGG | - | chr1.4:82518473-82518492 | MS.gene71642:CDS | 55.0% |
| AAAGGGTGGCAAGGAGACCG+TGG | + | chr1.4:82518072-82518091 | None:intergenic | 60.0% | |
| AAGAGAGGAGGAGGAGGAGG+AGG | + | chr1.4:82514892-82514911 | None:intergenic | 60.0% | |
| AAGGAGAGGGACGGAAGCGA+TGG | + | chr1.4:82514920-82514939 | None:intergenic | 60.0% | |
| ACAGCATGCACCTTCGAGGG+GGG | + | chr1.4:82518472-82518491 | None:intergenic | 60.0% | |
| AGGAAGAGAGGAGGAGGAGG+AGG | + | chr1.4:82514895-82514914 | None:intergenic | 60.0% | |
| AGGAGGAGAGGATGGAGGGA+AGG | + | chr1.4:82514875-82514894 | None:intergenic | 60.0% | |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr1.4:82517547-82517566 | MS.gene71642:intron | 60.0% | |
| CCCAACAGCATGCACCTTCG+AGG | + | chr1.4:82518476-82518495 | None:intergenic | 60.0% | |
| GAGAGGAAGAGAGGAGGAGG+AGG | + | chr1.4:82514898-82514917 | None:intergenic | 60.0% | |
| GAGGAGGAGGAGAGGATGGA+GGG | + | chr1.4:82514879-82514898 | None:intergenic | 60.0% | |
| GCGATGGAGAGGAAGAGAGG+AGG | + | chr1.4:82514904-82514923 | None:intergenic | 60.0% | |
| GGAGGAGAGGATGGAGGGAA+GGG | + | chr1.4:82514874-82514893 | None:intergenic | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr1.4:82517662-82517681 | MS.gene71642:intron | 60.0% |
| ! | CCCTCGAAGGTGCATGCTGT+TGG | - | chr1.4:82518472-82518491 | MS.gene71642:CDS | 60.0% |
| ! | TGCACTGACCCGCATACGCA+GGG | + | chr1.4:82517689-82517708 | None:intergenic | 60.0% |
| AGGAGGAGGAGGAGGAGGAG+AGG | + | chr1.4:82514887-82514906 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr1.4:82517677-82517696 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.4:82517664-82517683 | None:intergenic | 65.0% | |
| CGTATGCGGGTCAGTGCACC+AGG | - | chr1.4:82517691-82517710 | MS.gene71642:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr1.4:82517677-82517696 | MS.gene71642:intron | 65.0% | |
| GAGGGACGGAAGCGATGGAG+AGG | + | chr1.4:82514915-82514934 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr1.4:82517678-82517697 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGAGGATGG+AGG | + | chr1.4:82514880-82514899 | None:intergenic | 65.0% | |
| GGAGGAGGAGGAGGAGAGGA+TGG | + | chr1.4:82514883-82514902 | None:intergenic | 65.0% | |
| TGACCCGCATACGCAGGGTC+CGG | + | chr1.4:82517684-82517703 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr1.4:82517678-82517697 | MS.gene71642:intron | 65.0% | |
| ! | GTGCACTGACCCGCATACGC+AGG | + | chr1.4:82517690-82517709 | None:intergenic | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr1.4:82517679-82517698 | None:intergenic | 70.0% | |
| GACCCGCATACGCAGGGTCC+GGG | + | chr1.4:82517683-82517702 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 82514864 | 82518598 | 82514864 | ID=MS.gene71642 |
| chr1.4 | mRNA | 82514864 | 82518598 | 82514864 | ID=MS.gene71642.t1;Parent=MS.gene71642 |
| chr1.4 | exon | 82518422 | 82518598 | 82518422 | ID=MS.gene71642.t1.exon1;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82518422 | 82518598 | 82518422 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| chr1.4 | exon | 82518060 | 82518265 | 82518060 | ID=MS.gene71642.t1.exon2;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82518060 | 82518265 | 82518060 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| chr1.4 | exon | 82517001 | 82517280 | 82517001 | ID=MS.gene71642.t1.exon3;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82517001 | 82517280 | 82517001 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| chr1.4 | exon | 82516251 | 82516358 | 82516251 | ID=MS.gene71642.t1.exon4;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82516251 | 82516358 | 82516251 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| chr1.4 | exon | 82515208 | 82515452 | 82515208 | ID=MS.gene71642.t1.exon5;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82515208 | 82515452 | 82515208 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| chr1.4 | exon | 82514864 | 82514981 | 82514864 | ID=MS.gene71642.t1.exon6;Parent=MS.gene71642.t1 |
| chr1.4 | CDS | 82514864 | 82514981 | 82514864 | ID=cds.MS.gene71642.t1;Parent=MS.gene71642.t1 |
| Gene Sequence |
| Protein sequence |
