Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71643.t1 | XP_013470010.1 | 97.1 | 851 | 25 | 0 | 1 | 851 | 1 | 851 | 0.00E+00 | 1352.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71643.t1 | P48786 | 46.0 | 581 | 244 | 16 | 194 | 732 | 442 | 994 | 9.8e-110 | 399.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71643.t1 | A0A072VRI3 | 97.1 | 851 | 25 | 0 | 1 | 851 | 1 | 851 | 0.0e+00 | 1352.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71643.t1 | TF | HB-PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050114 | MS.gene71643 | 0.805983 | 1.03E-49 | -1.69E-46 |
| MS.gene050317 | MS.gene71643 | 0.815838 | 7.53E-52 | -1.69E-46 |
| MS.gene052434 | MS.gene71643 | 0.820655 | 6.12E-53 | -1.69E-46 |
| MS.gene053109 | MS.gene71643 | 0.801129 | 1.04E-48 | -1.69E-46 |
| MS.gene053381 | MS.gene71643 | 0.8202 | 7.78E-53 | -1.69E-46 |
| MS.gene055311 | MS.gene71643 | 0.814483 | 1.51E-51 | -1.69E-46 |
| MS.gene058646 | MS.gene71643 | 0.80274 | 4.86E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene71643 | 0.814104 | 1.83E-51 | -1.69E-46 |
| MS.gene060296 | MS.gene71643 | 0.870323 | 1.59E-66 | -1.69E-46 |
| MS.gene060702 | MS.gene71643 | 0.81097 | 8.84E-51 | -1.69E-46 |
| MS.gene060869 | MS.gene71643 | 0.81938 | 1.20E-52 | -1.69E-46 |
| MS.gene060870 | MS.gene71643 | 0.809212 | 2.12E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71643.t1 | MTR_1g107015 | 97.297 | 851 | 23 | 0 | 1 | 851 | 1 | 851 | 0.0 | 1700 |
| MS.gene71643.t1 | MTR_1g107015 | 96.945 | 851 | 26 | 0 | 1 | 851 | 76 | 926 | 0.0 | 1694 |
| MS.gene71643.t1 | MTR_1g107015 | 97.215 | 826 | 23 | 0 | 26 | 851 | 1 | 826 | 0.0 | 1649 |
| MS.gene71643.t1 | MTR_2g038000 | 32.041 | 490 | 234 | 10 | 245 | 726 | 135 | 533 | 7.88e-67 | 236 |
| MS.gene71643.t1 | MTR_7g053103 | 52.903 | 155 | 16 | 5 | 119 | 272 | 146 | 244 | 6.34e-32 | 129 |
| MS.gene71643.t1 | MTR_6g453220 | 85.417 | 48 | 7 | 0 | 101 | 148 | 50 | 97 | 4.75e-17 | 85.5 |
| MS.gene71643.t1 | MTR_6g453210 | 75.610 | 41 | 10 | 0 | 1 | 41 | 73 | 113 | 5.90e-14 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71643.t1 | AT3G19510 | 46.981 | 530 | 227 | 13 | 231 | 726 | 158 | 667 | 3.95e-126 | 396 |
| MS.gene71643.t1 | AT3G19510 | 46.981 | 530 | 227 | 13 | 231 | 726 | 158 | 667 | 3.95e-126 | 396 |
| MS.gene71643.t1 | AT4G29940 | 47.701 | 174 | 91 | 0 | 249 | 422 | 104 | 277 | 5.73e-53 | 198 |
| MS.gene71643.t1 | AT4G29940 | 47.701 | 174 | 91 | 0 | 249 | 422 | 104 | 277 | 6.59e-53 | 197 |
Find 191 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGGATCTATTTCAAAATT+TGG | 0.074634 | 1.4:+82533097 | MS.gene71643:CDS |
| GAGGATTTGACTCCGGTTTC+TGG | 0.158146 | 1.4:+82534384 | MS.gene71643:CDS |
| GATGATGTTAAGAACTTTAA+AGG | 0.214262 | 1.4:+82534285 | MS.gene71643:CDS |
| TGGTGACCCTGGAGTTATTT+TGG | 0.234456 | 1.4:-82534948 | None:intergenic |
| GAACTTGTTAACGACTTGTT+AGG | 0.256613 | 1.4:+82533549 | MS.gene71643:CDS |
| AACTTGATTGATGCTTATTC+TGG | 0.261982 | 1.4:+82531261 | MS.gene71643:CDS |
| CGTGCATCCTTCAAGTGTTT+TGG | 0.276722 | 1.4:-82535056 | None:intergenic |
| AGAAAGCTTGGCGCAAGAAC+TGG | 0.299690 | 1.4:+82535646 | MS.gene71643:CDS |
| TCAATCGGTTCAGGATCTTT+AGG | 0.304332 | 1.4:-82531087 | None:intergenic |
| GAGCTACTGGATCCACCTTC+TGG | 0.306748 | 1.4:+82530772 | MS.gene71643:CDS |
| GACTTACTTCATACAGCTTT+TGG | 0.314803 | 1.4:-82534434 | None:intergenic |
| TAATTTGCGTTGCAGAATTT+CGG | 0.324123 | 1.4:-82533069 | None:intergenic |
| CTCAATCTTTGATTGCTTAC+CGG | 0.331704 | 1.4:+82536119 | MS.gene71643:CDS |
| GTCTCTCTCTTACTGATTCC+TGG | 0.333479 | 1.4:+82533577 | MS.gene71643:CDS |
| TCAGAATCAAACAAAGATTC+AGG | 0.338756 | 1.4:-82533146 | None:intergenic |
| CCAGCAGCTGTAGCTGCTTC+GGG | 0.350968 | 1.4:-82533910 | None:intergenic |
| GGATCTTGCTGCTACAATTA+AGG | 0.352745 | 1.4:+82534218 | MS.gene71643:CDS |
| TCCAGCAGCTGTAGCTGCTT+CGG | 0.353688 | 1.4:-82533911 | None:intergenic |
| GAATTTGATTTCACTTGAAC+AGG | 0.365153 | 1.4:-82530742 | None:intergenic |
| GCCCGTTGAATCTCCTTCTC+TGG | 0.369302 | 1.4:-82533041 | None:intergenic |
| CTTGAAGGATGCACGGAATC+TGG | 0.377830 | 1.4:+82535064 | MS.gene71643:CDS |
| CGGGTATCACCAGCTCTGTT+TGG | 0.380960 | 1.4:+82533358 | MS.gene71643:CDS |
| TATCGAAGAAGTATGTATTA+AGG | 0.385742 | 1.4:+82531013 | MS.gene71643:CDS |
| GACAGTTCATCGGTTATAGA+TGG | 0.390879 | 1.4:-82534333 | None:intergenic |
| TGAATCTTTGTTTGATTCTG+AGG | 0.392645 | 1.4:+82533148 | MS.gene71643:CDS |
| TTCGCATCCTCTGGAGCATC+AGG | 0.392731 | 1.4:-82533994 | None:intergenic |
| CCTTCAACCTTCGCATCCTC+TGG | 0.393078 | 1.4:-82534003 | None:intergenic |
| TTATAGGTTGACAAATGGTT+TGG | 0.393912 | 1.4:+82535772 | MS.gene71643:intron |
| GAGCTGAAAATAAAGGAGAT+AGG | 0.394447 | 1.4:+82535926 | MS.gene71643:CDS |
| GAGCAGGAACAGATTGTGTT+TGG | 0.396385 | 1.4:-82530870 | None:intergenic |
| ATTAGTTCTCAAAACGAAAC+TGG | 0.398396 | 1.4:+82530811 | MS.gene71643:CDS |
| AGGATTTGACTCCGGTTTCT+GGG | 0.404664 | 1.4:+82534385 | MS.gene71643:CDS |
| GGACTAATGATTAGTTCAAC+TGG | 0.405013 | 1.4:+82530460 | None:intergenic |
| CCCGAAGCAGCTACAGCTGC+TGG | 0.412983 | 1.4:+82533910 | MS.gene71643:CDS |
| GACAGTGGAGCTGAAAATAA+AGG | 0.414026 | 1.4:+82535871 | MS.gene71643:CDS |
| GTATCTTTAGCACCAGGATT+GGG | 0.417924 | 1.4:-82534156 | None:intergenic |
| CAAGTGAAAACAGAATCTTC+TGG | 0.418110 | 1.4:+82530892 | MS.gene71643:CDS |
| AATCAAAGATTGAGCCGTTA+TGG | 0.420656 | 1.4:-82536110 | None:intergenic |
| ACTTGGAGAAGCTGTTGTTC+AGG | 0.422804 | 1.4:+82535114 | MS.gene71643:CDS |
| TTATTTGAGGCGTTTCCATT+TGG | 0.424610 | 1.4:-82534968 | None:intergenic |
| GAAACGAGTGATGCAGTTAC+TGG | 0.424624 | 1.4:+82530835 | MS.gene71643:CDS |
| GATTTCACTTGAACAGGAAC+GGG | 0.425167 | 1.4:-82530736 | None:intergenic |
| CCAGAGGATGCGAAGGTTGA+AGG | 0.427357 | 1.4:+82534003 | MS.gene71643:CDS |
| TCTTTAGCAGAGCCAGATCT+TGG | 0.428193 | 1.4:+82534357 | MS.gene71643:CDS |
| TTTGATTGCTTACCGGTAGC+TGG | 0.429095 | 1.4:+82536126 | MS.gene71643:CDS |
| CATCATCACTAGTATCACTA+TGG | 0.433662 | 1.4:-82534877 | None:intergenic |
| ATGCTGATGGGTGTTCCTCT+TGG | 0.436575 | 1.4:-82535005 | None:intergenic |
| GATCCCGATGCTCCCAATCC+TGG | 0.436787 | 1.4:+82534144 | MS.gene71643:CDS |
| GTAACAGTATCAATCGGTTC+AGG | 0.439745 | 1.4:-82531096 | None:intergenic |
| TTCTCAGTCGTAAAATCGTT+GGG | 0.440583 | 1.4:-82530496 | None:intergenic |
| CGGTTATAGATGGCTTCTTA+CGG | 0.441698 | 1.4:-82534323 | None:intergenic |
| CTCAGAGTCAGATGTGAAAT+CGG | 0.442930 | 1.4:-82534196 | None:intergenic |
| AAATTCTGTGAATGAGCTAC+TGG | 0.443097 | 1.4:+82530759 | MS.gene71643:CDS |
| CTCCCTTATAGGTTGACAAA+TGG | 0.447598 | 1.4:+82535767 | MS.gene71643:intron |
| GAAAGCGGAGCTGAAAATAA+AGG | 0.453174 | 1.4:+82535919 | MS.gene71643:CDS |
| ACTTGAACAGGAACGGGTTG+TGG | 0.457052 | 1.4:-82530730 | None:intergenic |
| ATGCTTATTCTGGTGAGGGC+TGG | 0.457759 | 1.4:+82531271 | MS.gene71643:CDS |
| TCACCCACCAAAACACTTGA+AGG | 0.460627 | 1.4:+82535049 | MS.gene71643:CDS |
| GAAAAGAAATGTTGAAAGGC+TGG | 0.463300 | 1.4:+82534407 | MS.gene71643:CDS |
| TCATCTTTGCAATCACATCC+TGG | 0.464187 | 1.4:-82533519 | None:intergenic |
| TAGTAGCCAACACTTTGGTC+TGG | 0.464284 | 1.4:-82533298 | None:intergenic |
| TCATGTAAGGAGGCCAGTCC+AGG | 0.466183 | 1.4:+82535823 | MS.gene71643:CDS |
| TACAGCTGCTGGAAGTATCT+TGG | 0.467307 | 1.4:+82533921 | MS.gene71643:CDS |
| ATCTGCCTCTGAGAAATTTG+AGG | 0.471666 | 1.4:+82534059 | MS.gene71643:CDS |
| AAACCCCAAGCTCGAAGAAA+AGG | 0.472897 | 1.4:+82536046 | MS.gene71643:CDS |
| TCAATACATGGGTCTTCCTT+CGG | 0.473784 | 1.4:+82534098 | MS.gene71643:CDS |
| GCACCAGGATTGGGAGCATC+GGG | 0.473958 | 1.4:-82534147 | None:intergenic |
| AGTATCTTTAGCACCAGGAT+TGG | 0.476428 | 1.4:-82534157 | None:intergenic |
| AAATCCTCTTCACCAAGATC+TGG | 0.477201 | 1.4:-82534369 | None:intergenic |
| CAGTTGAATAACAGAATTCT+CGG | 0.477501 | 1.4:-82530662 | None:intergenic |
| GCGTTTCCATTTGGTGACCC+TGG | 0.477588 | 1.4:-82534959 | None:intergenic |
| GCGACAGAGCTCTGCGGTCG+AGG | 0.478343 | 1.4:+82531049 | MS.gene71643:CDS |
| AACTTGTTAACGACTTGTTA+GGG | 0.483719 | 1.4:+82533550 | MS.gene71643:CDS |
| CTTCTCAGTCGTAAAATCGT+TGG | 0.484570 | 1.4:-82530497 | None:intergenic |
| GTGAGGGCTGGAAAGGATAC+AGG | 0.485234 | 1.4:+82531283 | MS.gene71643:CDS |
| ATGTATTGATCCTCATGGCC+TGG | 0.487322 | 1.4:-82534084 | None:intergenic |
| GCAGACATCTGAAGCAGGGC+TGG | 0.488443 | 1.4:+82536086 | MS.gene71643:CDS |
| ATTGATGCTTATTCTGGTGA+GGG | 0.490730 | 1.4:+82531267 | MS.gene71643:CDS |
| AGCACCAGGATTGGGAGCAT+CGG | 0.491856 | 1.4:-82534148 | None:intergenic |
| GGTCAAATGCGAGTGAAACA+TGG | 0.492083 | 1.4:+82530970 | MS.gene71643:CDS |
| ATGAAATGAAGACAAAAGAA+AGG | 0.492286 | 1.4:+82531133 | MS.gene71643:CDS |
| GTTCCTCTTGGCAGTACGGC+GGG | 0.492474 | 1.4:-82534993 | None:intergenic |
| GAGCCGCAGACATCTGAAGC+AGG | 0.495421 | 1.4:+82536081 | MS.gene71643:CDS |
| AGGAGATAATGCTTCGCAGC+AGG | 0.495905 | 1.4:+82535891 | MS.gene71643:CDS |
| TCTCTCTCTTACTGATTCCT+GGG | 0.498409 | 1.4:+82533578 | MS.gene71643:CDS |
| AAGTATGTATTAAGGTCGTT+AGG | 0.498676 | 1.4:+82531021 | MS.gene71643:CDS |
| GATTGATGCTTATTCTGGTG+AGG | 0.499509 | 1.4:+82531266 | MS.gene71643:CDS |
| TTATTGCTTGTGCCAGCTAC+CGG | 0.500696 | 1.4:-82536138 | None:intergenic |
| AAGTATCTTGGATCACAACC+TGG | 0.500741 | 1.4:+82533933 | MS.gene71643:CDS |
| AGCTGAAAATAAAGGAGATA+GGG | 0.501616 | 1.4:+82535927 | MS.gene71643:CDS |
| GACAGAGAACAAAGTGTGCT+TGG | 0.502185 | 1.4:+82530580 | MS.gene71643:CDS |
| ATAACTCCAGGGTCACCAAA+TGG | 0.504477 | 1.4:+82534953 | MS.gene71643:CDS |
| GGATCTTCATACAATAAACT+TGG | 0.506409 | 1.4:+82535097 | MS.gene71643:CDS |
| GCCAGAGAAGGAGATTCAAC+GGG | 0.508450 | 1.4:+82533040 | MS.gene71643:CDS |
| TACTAGTGATGATGAAGATT+GGG | 0.508913 | 1.4:+82534886 | MS.gene71643:CDS |
| GGGTGTTCCTCTTGGCAGTA+CGG | 0.509060 | 1.4:-82534997 | None:intergenic |
| TCTGAGAAATTTGAGGATCC+AGG | 0.510014 | 1.4:+82534066 | MS.gene71643:CDS |
| GTTCCGACATTCATCATGTA+AGG | 0.513678 | 1.4:+82535810 | MS.gene71643:CDS |
| GAAAGCTTGGCGCAAGAACT+GGG | 0.514904 | 1.4:+82535647 | MS.gene71643:CDS |
| ACTGCATCTCTCATTTCGCC+AGG | 0.515178 | 1.4:-82530685 | None:intergenic |
| ATTATTAGTAGCCAACACTT+TGG | 0.517226 | 1.4:-82533303 | None:intergenic |
| GGAGCATCAACTTGTTTCCC+AGG | 0.519442 | 1.4:+82536002 | MS.gene71643:CDS |
| ATACTAGTGATGATGAAGAT+TGG | 0.521341 | 1.4:+82534885 | MS.gene71643:CDS |
| CTGCGGCTTACAGTTCCACC+TGG | 0.522100 | 1.4:+82533477 | MS.gene71643:intron |
| GGTTTGGCAATTCTCGTTGG+AGG | 0.524613 | 1.4:+82535788 | MS.gene71643:CDS |
| TACAGTTCCACCTGGCGATG+AGG | 0.529326 | 1.4:+82533485 | MS.gene71643:intron |
| GCGTTGCAGAATTTCGGACT+TGG | 0.530640 | 1.4:-82533063 | None:intergenic |
| CATAACCAACCCTCATCGCC+AGG | 0.530946 | 1.4:-82533495 | None:intergenic |
| TGATTTCACTTGAACAGGAA+CGG | 0.534261 | 1.4:-82530737 | None:intergenic |
| AGTAATATCTCAGTTGAGCT+CGG | 0.534961 | 1.4:-82531215 | None:intergenic |
| CTGGGAAAAGAAATGTTGAA+AGG | 0.535766 | 1.4:+82534403 | MS.gene71643:CDS |
| AATGGTTTGGCAATTCTCGT+TGG | 0.540198 | 1.4:+82535785 | MS.gene71643:CDS |
| TTGGATTCGTTATGTGCTGA+AGG | 0.540214 | 1.4:+82533116 | MS.gene71643:CDS |
| GTGATGGTGCTTGTGACCGC+GGG | 0.542507 | 1.4:+82533339 | MS.gene71643:CDS |
| AGTACGGCGGGAATTATTTG+AGG | 0.542860 | 1.4:-82534981 | None:intergenic |
| ACGGACCGCAAAAGAAAGCT+TGG | 0.543668 | 1.4:+82535634 | MS.gene71643:CDS |
| ATTCGTTATGTGCTGAAGGA+AGG | 0.544325 | 1.4:+82533120 | MS.gene71643:CDS |
| AATTCTGTTATTCAACTGCC+TGG | 0.546096 | 1.4:+82530667 | MS.gene71643:CDS |
| GAATCTTTGTTTGATTCTGA+GGG | 0.547335 | 1.4:+82533149 | MS.gene71643:CDS |
| AGGTAGTAATGCTTCACAGC+AGG | 0.547657 | 1.4:+82535843 | MS.gene71643:CDS |
| AGGCCATGAGGATCAATACA+TGG | 0.550655 | 1.4:+82534086 | MS.gene71643:CDS |
| TATTCTGGTGAGGGCTGGAA+AGG | 0.551866 | 1.4:+82531276 | MS.gene71643:CDS |
| AGAGCCAGATCTTGGTGAAG+AGG | 0.552428 | 1.4:+82534365 | MS.gene71643:CDS |
| TTCGCAACATCTCCAGAAGG+TGG | 0.552717 | 1.4:-82530784 | None:intergenic |
| TTGTGGTTGTTCTTCAACAA+GGG | 0.552863 | 1.4:-82530713 | None:intergenic |
| ACAGTTCCACCTGGCGATGA+GGG | 0.553392 | 1.4:+82533486 | MS.gene71643:intron |
| TTCCACCTGGCGATGAGGGT+TGG | 0.555753 | 1.4:+82533490 | MS.gene71643:CDS |
| AGCCAGAGAAGGAGATTCAA+CGG | 0.560164 | 1.4:+82533039 | MS.gene71643:CDS |
| GTCAAATGCGAGTGAAACAT+GGG | 0.562133 | 1.4:+82530971 | MS.gene71643:CDS |
| AGATGTGACATCATCTTGTC+CGG | 0.564545 | 1.4:-82534253 | None:intergenic |
| TCTTCAGTATCTTTAGCACC+AGG | 0.564626 | 1.4:-82534162 | None:intergenic |
| TGCTGTGAAGCATTACTACC+TGG | 0.569191 | 1.4:-82535841 | None:intergenic |
| CATCTTTGCAATCACATCCT+GGG | 0.569916 | 1.4:-82533518 | None:intergenic |
| ACATCAGTAACAGTATCAAT+CGG | 0.571296 | 1.4:-82531102 | None:intergenic |
| CTGACCGCCAAAATAACTCC+AGG | 0.571543 | 1.4:+82534941 | MS.gene71643:CDS |
| AAATGAAGACAAAAGAAAGG+AGG | 0.573526 | 1.4:+82531136 | MS.gene71643:CDS |
| GACCCATGTATTGATCCTCA+TGG | 0.576189 | 1.4:-82534089 | None:intergenic |
| CTTGTTTCCCAGGAGACAAG+TGG | 0.576622 | 1.4:+82536012 | MS.gene71643:CDS |
| TCGCAGCAGGCCAGTGAAAG+CGG | 0.580172 | 1.4:+82535904 | MS.gene71643:CDS |
| TCTACTTGGAGTAGCAGTGT+CGG | 0.582959 | 1.4:-82534909 | None:intergenic |
| TGGTGAAGAGGATTTGACTC+CGG | 0.583636 | 1.4:+82534377 | MS.gene71643:CDS |
| TGATGTCACATCTGCACCGT+TGG | 0.585319 | 1.4:+82534263 | MS.gene71643:CDS |
| TGAAGCATTACTACCTGGAC+TGG | 0.585531 | 1.4:-82535836 | None:intergenic |
| TGTTCCTCTTGGCAGTACGG+CGG | 0.587710 | 1.4:-82534994 | None:intergenic |
| ATGGAGGATCCAAACAGAGC+TGG | 0.587853 | 1.4:-82533367 | None:intergenic |
| ATTGTGTTTGGTCTTCAACA+AGG | 0.590483 | 1.4:-82530858 | None:intergenic |
| TGTGATGGTGCTTGTGACCG+CGG | 0.591361 | 1.4:+82533338 | MS.gene71643:CDS |
| GTTGTGGTTGTTCTTCAACA+AGG | 0.591435 | 1.4:-82530714 | None:intergenic |
| CTCTCTTACTGATTCCTGGG+AGG | 0.591608 | 1.4:+82533581 | MS.gene71643:CDS |
| TCTTCCTTCGGAAGATTCAG+AGG | 0.592723 | 1.4:+82534110 | MS.gene71643:CDS |
| AAGAAAATCAATATCCAGAA+CGG | 0.595382 | 1.4:+82535615 | MS.gene71643:CDS |
| TGCTAAAGATGACAGTTCAT+CGG | 0.595530 | 1.4:-82534343 | None:intergenic |
| TTACTGTCTTCAGTTAACAA+TGG | 0.602560 | 1.4:-82533386 | None:intergenic |
| CTGTCTTCAGTTAACAATGG+AGG | 0.604628 | 1.4:-82533383 | None:intergenic |
| TCGCAGCAAGCCACTGACAG+CGG | 0.604697 | 1.4:+82535958 | MS.gene71643:CDS |
| AGCCGCAGACATCTGAAGCA+GGG | 0.606461 | 1.4:+82536082 | MS.gene71643:CDS |
| AGGTGAAAACAAAGGAGAGA+CGG | 0.611195 | 1.4:+82535981 | MS.gene71643:CDS |
| CAAAACACTTGAAGGATGCA+CGG | 0.611620 | 1.4:+82535057 | MS.gene71643:CDS |
| AATGATATAATTCTCTGTGA+TGG | 0.615057 | 1.4:+82533323 | MS.gene71643:CDS |
| AATCATCTGAAGGAAGTCCC+AGG | 0.615967 | 1.4:-82533951 | None:intergenic |
| CCTCCTTACATGATGAATGT+CGG | 0.617098 | 1.4:-82535813 | None:intergenic |
| TCATCCTCTGAATCTTCCGA+AGG | 0.620563 | 1.4:-82534114 | None:intergenic |
| ATTAAGGATAACATGTCCAC+CGG | 0.621242 | 1.4:+82534234 | MS.gene71643:CDS |
| CGATTTCACATCTGACTCTG+AGG | 0.622480 | 1.4:+82534197 | MS.gene71643:CDS |
| GAAGCAGGGCTGGTCCATAA+CGG | 0.623774 | 1.4:+82536096 | MS.gene71643:CDS |
| TGAGGGAGAGATTGATAGCG+AGG | 0.625849 | 1.4:+82533166 | MS.gene71643:CDS |
| AAAATGCCAGACCAAAGTGT+TGG | 0.625899 | 1.4:+82533292 | MS.gene71643:CDS |
| CAGCAAGCCACTGACAGCGG+AGG | 0.628403 | 1.4:+82535961 | MS.gene71643:CDS |
| TCATCGTCAGAATCATCTGA+AGG | 0.631384 | 1.4:-82533961 | None:intergenic |
| GCTGAAAATAAAGGAGATAG+GGG | 0.633536 | 1.4:+82535928 | MS.gene71643:CDS |
| TGATGCTCCAGAGGATGCGA+AGG | 0.634645 | 1.4:+82533996 | MS.gene71643:CDS |
| TCACAGCAGGCCAATGACAG+TGG | 0.635719 | 1.4:+82535856 | MS.gene71643:CDS |
| ACAAAGTGTGCTTGGTACTG+TGG | 0.637548 | 1.4:+82530588 | MS.gene71643:CDS |
| TTATAATCCTGATGCTCCAG+AGG | 0.638161 | 1.4:+82533987 | MS.gene71643:CDS |
| TGTGACATCATCTTGTCCGG+TGG | 0.646990 | 1.4:-82534250 | None:intergenic |
| AAGTTCTTAACATCATCCAA+CGG | 0.647331 | 1.4:-82534279 | None:intergenic |
| CCGACATTCATCATGTAAGG+AGG | 0.650409 | 1.4:+82535813 | MS.gene71643:CDS |
| GGCCATGAGGATCAATACAT+GGG | 0.661032 | 1.4:+82534087 | MS.gene71643:CDS |
| GATGAGGGTTGGTTATGCCC+AGG | 0.661408 | 1.4:+82533501 | MS.gene71643:CDS |
| AGTATCTTGGATCACAACCT+GGG | 0.671806 | 1.4:+82533934 | MS.gene71643:CDS |
| ATTTGAGGATCCAGGCCATG+AGG | 0.675316 | 1.4:+82534074 | MS.gene71643:CDS |
| GAGGATGCGAAGGTTGAAGG+AGG | 0.677573 | 1.4:+82534006 | MS.gene71643:CDS |
| TGACCGCCAAAATAACTCCA+GGG | 0.677588 | 1.4:+82534942 | MS.gene71643:CDS |
| AGCCCTGCTTCAGATGTCTG+CGG | 0.678843 | 1.4:-82536084 | None:intergenic |
| ATTCCCGCCGTACTGCCAAG+AGG | 0.692868 | 1.4:+82534990 | MS.gene71643:CDS |
| TGGATCCTCAAATTTCTCAG+AGG | 0.694886 | 1.4:-82534064 | None:intergenic |
| AACAGAGCTGGTGATACCCG+CGG | 0.701915 | 1.4:-82533355 | None:intergenic |
| GACAGCGGAGGTGAAAACAA+AGG | 0.703274 | 1.4:+82535973 | MS.gene71643:CDS |
| AACCAACCCTCATCGCCAGG+TGG | 0.710395 | 1.4:-82533492 | None:intergenic |
| TCAAATGCGAGTGAAACATG+GGG | 0.741277 | 1.4:+82530972 | MS.gene71643:CDS |
| GAAGCAGCGACAGAGCTCTG+CGG | 0.763478 | 1.4:+82531043 | MS.gene71643:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTAAAGAATAAAATATAA+AGG | - | chr1.4:82533204-82533223 | None:intergenic | 10.0% |
| !!! | ATTAAACTTTTTTTATTCTA+GGG | - | chr1.4:82531649-82531668 | None:intergenic | 10.0% |
| !!! | GTATTTTTTTTTTTTTTTTG+TGG | + | chr1.4:82532960-82532979 | MS.gene71643:intron | 10.0% |
| !! | AATAAAATGAAGAAAAAGAA+AGG | + | chr1.4:82536156-82536175 | MS.gene71643:CDS | 15.0% |
| !! | AATATCTTTAATAACTTATG+AGG | + | chr1.4:82534591-82534610 | MS.gene71643:intron | 15.0% |
| !! | ACAAATAATGTTATAAAAAC+AGG | + | chr1.4:82533750-82533769 | MS.gene71643:intron | 15.0% |
| !! | ATAAAATGAAGAAAAAGAAA+GGG | + | chr1.4:82536157-82536176 | MS.gene71643:CDS | 15.0% |
| !!! | ATTTATGTATTTTTTTTCTG+CGG | + | chr1.4:82533460-82533479 | MS.gene71643:intron | 15.0% |
| !!! | CATTAAACTTTTTTTATTCT+AGG | - | chr1.4:82531650-82531669 | None:intergenic | 15.0% |
| !!! | TATCCAATTTTTCAAAATTT+GGG | + | chr1.4:82533227-82533246 | MS.gene71643:intron | 15.0% |
| !!! | TTAAACTTTTTTTATTCTAG+GGG | - | chr1.4:82531648-82531667 | None:intergenic | 15.0% |
| !!! | TTCTTTTTACTCTAATATTT+TGG | + | chr1.4:82532668-82532687 | MS.gene71643:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTTTGTGG+TGG | + | chr1.4:82532963-82532982 | MS.gene71643:intron | 15.0% |
| !! | AAAAAGTTTAATGTGATCTT+AGG | + | chr1.4:82531657-82531676 | MS.gene71643:intron | 20.0% |
| !! | AAGTTTCTCATGTTTATATT+TGG | - | chr1.4:82532159-82532178 | None:intergenic | 20.0% |
| !! | ATATACACTTGAGTATATTT+AGG | - | chr1.4:82535231-82535250 | None:intergenic | 20.0% |
| !! | TATACACTTGAGTATATTTA+GGG | - | chr1.4:82535230-82535249 | None:intergenic | 20.0% |
| !! | TATTAGAGTTCTTTCATATT+TGG | - | chr1.4:82534696-82534715 | None:intergenic | 20.0% |
| !! | TTATTCTTATAGTTTACTTG+AGG | + | chr1.4:82535301-82535320 | MS.gene71643:intron | 20.0% |
| !!! | AAGGTTCAGTTTTAAATTTT+TGG | - | chr1.4:82533667-82533686 | None:intergenic | 20.0% |
| !!! | ACAAACACTTTTATCTTATA+CGG | + | chr1.4:82531840-82531859 | MS.gene71643:intron | 20.0% |
| !!! | GATAAAACAAACATTTTAAG+AGG | - | chr1.4:82531962-82531981 | None:intergenic | 20.0% |
| !!! | GTATCCAATTTTTCAAAATT+TGG | + | chr1.4:82533226-82533245 | MS.gene71643:intron | 20.0% |
| !!! | GTTAGTTAGAAAACTTTTTA+AGG | + | chr1.4:82533603-82533622 | MS.gene71643:intron | 20.0% |
| !!! | TTCTAAGAAAGAAATCAAAT+AGG | - | chr1.4:82533629-82533648 | None:intergenic | 20.0% |
| ! | AAAATGACAATAAAACAGAG+GGG | - | chr1.4:82532790-82532809 | None:intergenic | 25.0% |
| ! | AAGAAAAAGACAAGAAAAGA+GGG | + | chr1.4:82531168-82531187 | MS.gene71643:CDS | 25.0% |
| ! | AAGAAAATCAATATCCAGAA+CGG | + | chr1.4:82535615-82535634 | MS.gene71643:CDS | 25.0% |
| ! | AATGATATAATTCTCTGTGA+TGG | + | chr1.4:82533323-82533342 | MS.gene71643:CDS | 25.0% |
| ! | AGAAAGAAAGTCTAAAAACT+TGG | + | chr1.4:82530948-82530967 | MS.gene71643:CDS | 25.0% |
| ! | ATACACTTGAGTATATTTAG+GGG | - | chr1.4:82535229-82535248 | None:intergenic | 25.0% |
| ! | ATGAAATGAAGACAAAAGAA+AGG | + | chr1.4:82531133-82531152 | MS.gene71643:CDS | 25.0% |
| ! | ATTCTCATAAACAATCATCT+AGG | - | chr1.4:82531810-82531829 | None:intergenic | 25.0% |
| ! | ATTGTGATTGTTATCTTGTT+TGG | + | chr1.4:82531557-82531576 | MS.gene71643:intron | 25.0% |
| ! | GAAAATGACAATAAAACAGA+GGG | - | chr1.4:82532791-82532810 | None:intergenic | 25.0% |
| ! | GAAAGAAAGTCTAAAAACTT+GGG | + | chr1.4:82530949-82530968 | MS.gene71643:CDS | 25.0% |
| ! | GAGGAAAAGAACAAAAAAAA+AGG | - | chr1.4:82534814-82534833 | None:intergenic | 25.0% |
| ! | GATGATGTTAAGAACTTTAA+AGG | + | chr1.4:82534285-82534304 | MS.gene71643:CDS | 25.0% |
| ! | TAACGAAATAGTAAAGAAAC+AGG | - | chr1.4:82534663-82534682 | None:intergenic | 25.0% |
| ! | TAGACCTCATATCAAAAAAA+GGG | - | chr1.4:82534459-82534478 | None:intergenic | 25.0% |
| ! | TAGTATGCAAATTAGAAACT+TGG | - | chr1.4:82535173-82535192 | None:intergenic | 25.0% |
| ! | TCTCATGTTTATATTTGGAA+AGG | - | chr1.4:82532154-82532173 | None:intergenic | 25.0% |
| ! | TGAAAATGACAATAAAACAG+AGG | - | chr1.4:82532792-82532811 | None:intergenic | 25.0% |
| ! | TGTTTCAATTTCCACATTAA+AGG | + | chr1.4:82531418-82531437 | MS.gene71643:intron | 25.0% |
| ! | TTAGACCTCATATCAAAAAA+AGG | - | chr1.4:82534460-82534479 | None:intergenic | 25.0% |
| ! | TTCTCATAAACAATCATCTA+GGG | - | chr1.4:82531809-82531828 | None:intergenic | 25.0% |
| !! | ATTGTGAAAATTTTGCAGTA+TGG | + | chr1.4:82533007-82533026 | MS.gene71643:intron | 25.0% |
| !! | ATTTAAAACTGAACCTTGTT+TGG | + | chr1.4:82533670-82533689 | MS.gene71643:intron | 25.0% |
| !! | ATTTTCAACTTTATGCTGAT+GGG | - | chr1.4:82535020-82535039 | None:intergenic | 25.0% |
| !! | CAAACACTTTTATCTTATAC+GGG | + | chr1.4:82531841-82531860 | MS.gene71643:intron | 25.0% |
| !! | CTGATGAATTTTGTGATATT+TGG | + | chr1.4:82532831-82532850 | MS.gene71643:intron | 25.0% |
| !! | CTTTAATGATCCATTTTCTT+GGG | + | chr1.4:82532352-82532371 | MS.gene71643:intron | 25.0% |
| !! | TATCGAAGAAGTATGTATTA+AGG | + | chr1.4:82531013-82531032 | MS.gene71643:CDS | 25.0% |
| !! | TATTTTCAACTTTATGCTGA+TGG | - | chr1.4:82535021-82535040 | None:intergenic | 25.0% |
| !! | TCTTTAATGATCCATTTTCT+TGG | + | chr1.4:82532351-82532370 | MS.gene71643:intron | 25.0% |
| !! | TTTTTACTGCACATAATAAC+TGG | + | chr1.4:82535393-82535412 | MS.gene71643:intron | 25.0% |
| !!! | AATTGCAGAAGTGATTTTTT+GGG | + | chr1.4:82535260-82535279 | MS.gene71643:intron | 25.0% |
| !!! | ACTCCCAAATTTTGAAAAAT+TGG | - | chr1.4:82533233-82533252 | None:intergenic | 25.0% |
| !!! | GTTAGCTTGTAATCTATATT+TGG | + | chr1.4:82531337-82531356 | MS.gene71643:intron | 25.0% |
| !!! | TGATAAATTACTTTGAAGCA+TGG | - | chr1.4:82533441-82533460 | None:intergenic | 25.0% |
| !!! | TTGTTTGGAGTCATATTTTT+TGG | + | chr1.4:82531572-82531591 | MS.gene71643:intron | 25.0% |
| AAAATCCAAATGGTCAGTAA+AGG | - | chr1.4:82532261-82532280 | None:intergenic | 30.0% | |
| AAACCATTTGTCAACCTATA+AGG | - | chr1.4:82535773-82535792 | None:intergenic | 30.0% | |
| AAATGAAGACAAAAGAAAGG+AGG | + | chr1.4:82531136-82531155 | MS.gene71643:CDS | 30.0% | |
| AAATTGAATGATAGACCGAA+AGG | - | chr1.4:82535202-82535221 | None:intergenic | 30.0% | |
| AACCATTTGTCAACCTATAA+GGG | - | chr1.4:82535772-82535791 | None:intergenic | 30.0% | |
| AACTTGATTGATGCTTATTC+TGG | + | chr1.4:82531261-82531280 | MS.gene71643:CDS | 30.0% | |
| AAGTATGTATTAAGGTCGTT+AGG | + | chr1.4:82531021-82531040 | MS.gene71643:CDS | 30.0% | |
| AAGTTCTTAACATCATCCAA+CGG | - | chr1.4:82534282-82534301 | None:intergenic | 30.0% | |
| AATTGAATGATAGACCGAAA+GGG | - | chr1.4:82535201-82535220 | None:intergenic | 30.0% | |
| ACATCAGTAACAGTATCAAT+CGG | - | chr1.4:82531105-82531124 | None:intergenic | 30.0% | |
| AGCTGAAAATAAAGGAGATA+GGG | + | chr1.4:82535879-82535898 | MS.gene71643:CDS | 30.0% | |
| AGTAAAGGTAAATCCAAACA+TGG | - | chr1.4:82532246-82532265 | None:intergenic | 30.0% | |
| ATAACTGTTATTCCTGCAAA+AGG | - | chr1.4:82535420-82535439 | None:intergenic | 30.0% | |
| ATACAAGAATAGTCACTCTA+AGG | - | chr1.4:82535570-82535589 | None:intergenic | 30.0% | |
| ATATGTAAGCTAGCACAATT+AGG | + | chr1.4:82532012-82532031 | MS.gene71643:intron | 30.0% | |
| ATATTCTAACTGTATCAGAG+TGG | + | chr1.4:82534623-82534642 | MS.gene71643:intron | 30.0% | |
| ATTATTAGTAGCCAACACTT+TGG | - | chr1.4:82533306-82533325 | None:intergenic | 30.0% | |
| ATTTACCTTTACTGACCATT+TGG | + | chr1.4:82532253-82532272 | MS.gene71643:intron | 30.0% | |
| CAAAACAAGTAAACCAAACA+AGG | - | chr1.4:82533686-82533705 | None:intergenic | 30.0% | |
| CAGCTAAGATAAAATCCAAA+TGG | - | chr1.4:82532271-82532290 | None:intergenic | 30.0% | |
| CAGGGATCTATTTCAAAATT+TGG | + | chr1.4:82533097-82533116 | MS.gene71643:CDS | 30.0% | |
| CAGTTGAATAACAGAATTCT+CGG | - | chr1.4:82530665-82530684 | None:intergenic | 30.0% | |
| CGCAGTATAAAAACTATACA+TGG | - | chr1.4:82532715-82532734 | None:intergenic | 30.0% | |
| CTAACGAAATCACAAAGTAA+TGG | - | chr1.4:82531322-82531341 | None:intergenic | 30.0% | |
| CTGAAAAAACAGTTCAGATT+GGG | + | chr1.4:82530545-82530564 | MS.gene71643:CDS | 30.0% | |
| CTTAAGCCAATTTGGTAAAA+CGG | - | chr1.4:82532435-82532454 | None:intergenic | 30.0% | |
| GAAGAAAAAGACAAGAAAAG+AGG | + | chr1.4:82531167-82531186 | MS.gene71643:CDS | 30.0% | |
| GAATCCTACAAAATTGCATT+TGG | - | chr1.4:82532323-82532342 | None:intergenic | 30.0% | |
| GCAACGCAAATTAAAAATCA+GGG | + | chr1.4:82533079-82533098 | MS.gene71643:CDS | 30.0% | |
| GCAATCATTCAACTTGTAAA+AGG | - | chr1.4:82531511-82531530 | None:intergenic | 30.0% | |
| GCTAAGGTCAAAAATAAATC+AGG | - | chr1.4:82531371-82531390 | None:intergenic | 30.0% | |
| GGAGTTAACATCAATTCTAT+TGG | + | chr1.4:82531439-82531458 | MS.gene71643:intron | 30.0% | |
| GGATCTTCATACAATAAACT+TGG | + | chr1.4:82535097-82535116 | MS.gene71643:CDS | 30.0% | |
| GTGATCTTAGGTATTTGAAT+TGG | + | chr1.4:82531669-82531688 | MS.gene71643:intron | 30.0% | |
| TAACTGAAGACAGTAATATC+TGG | + | chr1.4:82533393-82533412 | MS.gene71643:intron | 30.0% | |
| TATAGTTTACTTGAGGTAGA+AGG | + | chr1.4:82535308-82535327 | MS.gene71643:intron | 30.0% | |
| TCAATCCTGTAGTAAGATTT+GGG | - | chr1.4:82532479-82532498 | None:intergenic | 30.0% | |
| TCAGAATCAAACAAAGATTC+AGG | - | chr1.4:82533149-82533168 | None:intergenic | 30.0% | |
| TCTCATAAACAATCATCTAG+GGG | - | chr1.4:82531808-82531827 | None:intergenic | 30.0% | |
| TCTGAAAAAACAGTTCAGAT+TGG | + | chr1.4:82530544-82530563 | MS.gene71643:CDS | 30.0% | |
| TGATGTTAACTCCTTTAATG+TGG | - | chr1.4:82531432-82531451 | None:intergenic | 30.0% | |
| TGCAACGCAAATTAAAAATC+AGG | + | chr1.4:82533078-82533097 | MS.gene71643:CDS | 30.0% | |
| TGCATACTAATATTCCCTTT+CGG | + | chr1.4:82535184-82535203 | MS.gene71643:intron | 30.0% | |
| TTAAATGGATCCCAAGAAAA+TGG | - | chr1.4:82532365-82532384 | None:intergenic | 30.0% | |
| TTAAGCCAATTTGGTAAAAC+GGG | - | chr1.4:82532434-82532453 | None:intergenic | 30.0% | |
| TTACTGTCTTCAGTTAACAA+TGG | - | chr1.4:82533389-82533408 | None:intergenic | 30.0% | |
| TTCAATCCTGTAGTAAGATT+TGG | - | chr1.4:82532480-82532499 | None:intergenic | 30.0% | |
| TTTCCATTCAAAAGGAGATT+AGG | + | chr1.4:82535495-82535514 | MS.gene71643:intron | 30.0% | |
| TTTCTCTCTTTCCATTCAAA+AGG | + | chr1.4:82535487-82535506 | MS.gene71643:intron | 30.0% | |
| ! | AACACAGCTGTCTAAAATAT+TGG | - | chr1.4:82534839-82534858 | None:intergenic | 30.0% |
| ! | ACACAGCTGTCTAAAATATT+GGG | - | chr1.4:82534838-82534857 | None:intergenic | 30.0% |
| ! | AGTTTTGCTCATAGCTTATT+CGG | - | chr1.4:82531245-82531264 | None:intergenic | 30.0% |
| ! | ATACTAGTGATGATGAAGAT+TGG | + | chr1.4:82534885-82534904 | MS.gene71643:CDS | 30.0% |
| ! | ATCACCAAATGCAATTTTGT+AGG | + | chr1.4:82532316-82532335 | MS.gene71643:intron | 30.0% |
| ! | ATTAGTTCTCAAAACGAAAC+TGG | + | chr1.4:82530811-82530830 | MS.gene71643:CDS | 30.0% |
| ! | ATTTTTGACCTTAGCTCATT+GGG | + | chr1.4:82531376-82531395 | MS.gene71643:intron | 30.0% |
| ! | GAATCTTTGTTTGATTCTGA+GGG | + | chr1.4:82533149-82533168 | MS.gene71643:CDS | 30.0% |
| ! | GAATTTGATTTCACTTGAAC+AGG | - | chr1.4:82530745-82530764 | None:intergenic | 30.0% |
| ! | GGATACTATACTGGTTATTT+AGG | - | chr1.4:82531787-82531806 | None:intergenic | 30.0% |
| ! | GTGATTGTTAAGTTCTGTTT+TGG | + | chr1.4:82535136-82535155 | MS.gene71643:intron | 30.0% |
| ! | TAATTTGCGTTGCAGAATTT+CGG | - | chr1.4:82533072-82533091 | None:intergenic | 30.0% |
| ! | TACAAAATTGCATTTGGTGA+TGG | - | chr1.4:82532317-82532336 | None:intergenic | 30.0% |
| ! | TACTAGTGATGATGAAGATT+GGG | + | chr1.4:82534886-82534905 | MS.gene71643:CDS | 30.0% |
| ! | TGAATCTTTGTTTGATTCTG+AGG | + | chr1.4:82533148-82533167 | MS.gene71643:CDS | 30.0% |
| ! | TTATAGGTTGACAAATGGTT+TGG | + | chr1.4:82535772-82535791 | MS.gene71643:intron | 30.0% |
| ! | TTCAAATGAACCTTGCTATA+TGG | - | chr1.4:82532083-82532102 | None:intergenic | 30.0% |
| ! | TTTTTCATCGATAGCAGAAT+CGG | - | chr1.4:82530617-82530636 | None:intergenic | 30.0% |
| !! | AACTTGTTAACGACTTGTTA+GGG | + | chr1.4:82533550-82533569 | MS.gene71643:CDS | 30.0% |
| !! | TATTTTTGACCTTAGCTCAT+TGG | + | chr1.4:82531375-82531394 | MS.gene71643:intron | 30.0% |
| !!! | AAGTCCCTTTTTTTGATATG+AGG | + | chr1.4:82534452-82534471 | MS.gene71643:intron | 30.0% |
| !!! | ATTGCAGAAGTGATTTTTTG+GGG | + | chr1.4:82535261-82535280 | MS.gene71643:intron | 30.0% |
| !!! | GAATTGCAGAAGTGATTTTT+TGG | + | chr1.4:82535259-82535278 | MS.gene71643:intron | 30.0% |
| !!! | GTCAGTTTCTTTTTTCTACT+TGG | - | chr1.4:82534926-82534945 | None:intergenic | 30.0% |
| !!! | TGTGCTTTTTCAAATCACTT+TGG | + | chr1.4:82531864-82531883 | MS.gene71643:intron | 30.0% |
| !!! | TGTTTTTAGCATTGCTCTTA+TGG | + | chr1.4:82535696-82535715 | MS.gene71643:intron | 30.0% |
| AAATAAGATGTGGCATACAC+GGG | - | chr1.4:82532539-82532558 | None:intergenic | 35.0% | |
| AAATGGTGAGTGTATACATG+GGG | + | chr1.4:82531916-82531935 | MS.gene71643:intron | 35.0% | |
| AAATTCTGTGAATGAGCTAC+TGG | + | chr1.4:82530759-82530778 | MS.gene71643:CDS | 35.0% | |
| AACTGAAATGGAACTACATC+TGG | + | chr1.4:82531475-82531494 | MS.gene71643:intron | 35.0% | |
| AATAAAACAGAGGGGAAGAA+TGG | - | chr1.4:82532782-82532801 | None:intergenic | 35.0% | |
| AATCAAAGATTGAGCCGTTA+TGG | - | chr1.4:82536113-82536132 | None:intergenic | 35.0% | |
| AATGGTTAACTCAGAGTCAT+GGG | - | chr1.4:82535742-82535761 | None:intergenic | 35.0% | |
| AATTCTGTTATTCAACTGCC+TGG | + | chr1.4:82530667-82530686 | MS.gene71643:CDS | 35.0% | |
| AATTTCGCCTTAAGCCAATT+TGG | - | chr1.4:82532443-82532462 | None:intergenic | 35.0% | |
| ACCTATAAGGGAGAAAAGAA+TGG | - | chr1.4:82535760-82535779 | None:intergenic | 35.0% | |
| AGATGTAGTTCCATTTCAGT+TGG | - | chr1.4:82531476-82531495 | None:intergenic | 35.0% | |
| AGGTTCATTTGAATTTGACG+TGG | + | chr1.4:82532090-82532109 | MS.gene71643:intron | 35.0% | |
| AGTAATATCTCAGTTGAGCT+CGG | - | chr1.4:82531218-82531237 | None:intergenic | 35.0% | |
| AGTGTTTGTGCAGTAAATCA+GGG | - | chr1.4:82535446-82535465 | None:intergenic | 35.0% | |
| ATGCTGTAAGTTGTATGTGT+TGG | + | chr1.4:82534559-82534578 | MS.gene71643:intron | 35.0% | |
| ATTAAGGATAACATGTCCAC+CGG | + | chr1.4:82534234-82534253 | MS.gene71643:CDS | 35.0% | |
| ATTGATGCTTATTCTGGTGA+GGG | + | chr1.4:82531267-82531286 | MS.gene71643:CDS | 35.0% | |
| CAAATAAGATGTGGCATACA+CGG | - | chr1.4:82532540-82532559 | None:intergenic | 35.0% | |
| CAAATGGTGAGTGTATACAT+GGG | + | chr1.4:82531915-82531934 | MS.gene71643:intron | 35.0% | |
| CAAGGATAAGTCACATAATC+AGG | - | chr1.4:82533876-82533895 | None:intergenic | 35.0% | |
| CAAGTGAAAACAGAATCTTC+TGG | + | chr1.4:82530892-82530911 | MS.gene71643:CDS | 35.0% | |
| CAATCCTGTAGTAAGATTTG+GGG | - | chr1.4:82532478-82532497 | None:intergenic | 35.0% | |
| CATCATCACTAGTATCACTA+TGG | - | chr1.4:82534880-82534899 | None:intergenic | 35.0% | |
| CGAACAACACAAATAAGATG+TGG | - | chr1.4:82532549-82532568 | None:intergenic | 35.0% | |
| CTCAATCTTTGATTGCTTAC+CGG | + | chr1.4:82536119-82536138 | MS.gene71643:CDS | 35.0% | |
| CTGGGAAAAGAAATGTTGAA+AGG | + | chr1.4:82534403-82534422 | MS.gene71643:CDS | 35.0% | |
| GAAAAGAAATGTTGAAAGGC+TGG | + | chr1.4:82534407-82534426 | MS.gene71643:CDS | 35.0% | |
| GAGCTGAAAATAAAGGAGAT+AGG | + | chr1.4:82535878-82535897 | MS.gene71643:CDS | 35.0% | |
| GATAAGTCACATAATCAGGA+GGG | - | chr1.4:82533872-82533891 | None:intergenic | 35.0% | |
| GCTGAAAATAAAGGAGATAG+GGG | + | chr1.4:82535928-82535947 | MS.gene71643:CDS | 35.0% | |
| GGAAAAATTAAAGCCAGAGA+AGG | + | chr1.4:82533028-82533047 | MS.gene71643:CDS | 35.0% | |
| GGAGTGATCAATTAATCAAG+TGG | - | chr1.4:82533420-82533439 | None:intergenic | 35.0% | |
| TAAATTCTCCCAATGAGCTA+AGG | - | chr1.4:82531387-82531406 | None:intergenic | 35.0% | |
| TAATTGCTTGCCAACTGAAA+TGG | + | chr1.4:82531463-82531482 | MS.gene71643:intron | 35.0% | |
| TCAAATGGTGAGTGTATACA+TGG | + | chr1.4:82531914-82531933 | MS.gene71643:intron | 35.0% | |
| TCACAATATTCCAACACATG+CGG | - | chr1.4:82531544-82531563 | None:intergenic | 35.0% | |
| TCTAGTACATGATCAGAACA+TGG | - | chr1.4:82531611-82531630 | None:intergenic | 35.0% | |
| TGAATGCCACAAATAAGATG+TGG | - | chr1.4:82532643-82532662 | None:intergenic | 35.0% | |
| TGATTTCACTTGAACAGGAA+CGG | - | chr1.4:82530740-82530759 | None:intergenic | 35.0% | |
| TGCTAAAGATGACAGTTCAT+CGG | - | chr1.4:82534346-82534365 | None:intergenic | 35.0% | |
| TTCTCAGTCGTAAAATCGTT+GGG | - | chr1.4:82530499-82530518 | None:intergenic | 35.0% | |
| TTCTTGGGATCCATTTAATC+TGG | + | chr1.4:82532367-82532386 | MS.gene71643:intron | 35.0% | |
| TTGTGGTTGTTCTTCAACAA+GGG | - | chr1.4:82530716-82530735 | None:intergenic | 35.0% | |
| ! | ACATTTCTTTTCCCAGAAAC+CGG | - | chr1.4:82534399-82534418 | None:intergenic | 35.0% |
| ! | ACCATTCTTTTCTCCCTTAT+AGG | + | chr1.4:82535756-82535775 | MS.gene71643:intron | 35.0% |
| ! | ATAATAACTGGTCCTTTTGC+AGG | + | chr1.4:82535405-82535424 | MS.gene71643:intron | 35.0% |
| ! | ATTGTGTTTGGTCTTCAACA+AGG | - | chr1.4:82530861-82530880 | None:intergenic | 35.0% |
| ! | GAACTACATCTGGAATATTC+TGG | + | chr1.4:82531485-82531504 | MS.gene71643:intron | 35.0% |
| ! | GACTTACTTCATACAGCTTT+TGG | - | chr1.4:82534437-82534456 | None:intergenic | 35.0% |
| ! | GATTTTACGACTGAGAAGAT+AGG | + | chr1.4:82530502-82530521 | MS.gene71643:CDS | 35.0% |
| ! | TTATTTGAGGCGTTTCCATT+TGG | - | chr1.4:82534971-82534990 | None:intergenic | 35.0% |
| ! | TTTAAGAGGTGTACTTGTGT+CGG | - | chr1.4:82531948-82531967 | None:intergenic | 35.0% |
| ! | TTTGTGCCACATCTTATTTG+TGG | + | chr1.4:82532634-82532653 | MS.gene71643:intron | 35.0% |
| !! | CGTTTTACCAAATTGGCTTA+AGG | + | chr1.4:82532433-82532452 | MS.gene71643:intron | 35.0% |
| !! | GAACTTGTTAACGACTTGTT+AGG | + | chr1.4:82533549-82533568 | MS.gene71643:CDS | 35.0% |
| !!! | TTGCAGAAGTGATTTTTTGG+GGG | + | chr1.4:82535262-82535281 | MS.gene71643:intron | 35.0% |
| AAAATGCCAGACCAAAGTGT+TGG | + | chr1.4:82533292-82533311 | MS.gene71643:CDS | 40.0% | |
| AAATCCTCTTCACCAAGATC+TGG | - | chr1.4:82534372-82534391 | None:intergenic | 40.0% | |
| AACTCTCGTACCATATAGCA+AGG | + | chr1.4:82532070-82532089 | MS.gene71643:intron | 40.0% | |
| AAGTATCTTGGATCACAACC+TGG | + | chr1.4:82533933-82533952 | MS.gene71643:CDS | 40.0% | |
| AAGTCTATAACCGCATGTGT+TGG | + | chr1.4:82531531-82531550 | MS.gene71643:intron | 40.0% | |
| ACGGAATCTGGTAAAAAACG+TGG | + | chr1.4:82535076-82535095 | MS.gene71643:CDS | 40.0% | |
| AGATGTGACATCATCTTGTC+CGG | - | chr1.4:82534256-82534275 | None:intergenic | 40.0% | |
| AGGTGAAAACAAAGGAGAGA+CGG | + | chr1.4:82535981-82536000 | MS.gene71643:CDS | 40.0% | |
| AGTACACGAGAACAAATTCG+TGG | + | chr1.4:82531702-82531721 | MS.gene71643:intron | 40.0% | |
| AGTATCTTGGATCACAACCT+GGG | + | chr1.4:82533934-82533953 | MS.gene71643:CDS | 40.0% | |
| AGTATCTTTAGCACCAGGAT+TGG | - | chr1.4:82534160-82534179 | None:intergenic | 40.0% | |
| ATTCGTTATGTGCTGAAGGA+AGG | + | chr1.4:82533120-82533139 | MS.gene71643:CDS | 40.0% | |
| CAAAACACTTGAAGGATGCA+CGG | + | chr1.4:82535057-82535076 | MS.gene71643:CDS | 40.0% | |
| CAACAAGGGACCAGATTAAA+TGG | - | chr1.4:82532380-82532399 | None:intergenic | 40.0% | |
| CATCTTTGCAATCACATCCT+GGG | - | chr1.4:82533521-82533540 | None:intergenic | 40.0% | |
| CCTCCTTACATGATGAATGT+CGG | - | chr1.4:82535816-82535835 | None:intergenic | 40.0% | |
| CGGTTATAGATGGCTTCTTA+CGG | - | chr1.4:82534326-82534345 | None:intergenic | 40.0% | |
| CTCAACATGCATGCAAGTAT+GGG | - | chr1.4:82535531-82535550 | None:intergenic | 40.0% | |
| CTCAGAGTCAGATGTGAAAT+CGG | - | chr1.4:82534199-82534218 | None:intergenic | 40.0% | |
| CTCATTGGGAGAATTTAGAG+CGG | + | chr1.4:82531390-82531409 | MS.gene71643:intron | 40.0% | |
| CTGTCTTCAGTTAACAATGG+AGG | - | chr1.4:82533386-82533405 | None:intergenic | 40.0% | |
| CTTCTCAGTCGTAAAATCGT+TGG | - | chr1.4:82530500-82530519 | None:intergenic | 40.0% | |
| GAAAGCGGAGCTGAAAATAA+AGG | + | chr1.4:82535919-82535938 | MS.gene71643:CDS | 40.0% | |
| GAATGGTTAACTCAGAGTCA+TGG | - | chr1.4:82535743-82535762 | None:intergenic | 40.0% | |
| GACAGTGGAGCTGAAAATAA+AGG | + | chr1.4:82535871-82535890 | MS.gene71643:CDS | 40.0% | |
| GAGTGTTTGTGCAGTAAATC+AGG | - | chr1.4:82535447-82535466 | None:intergenic | 40.0% | |
| GATTGATGCTTATTCTGGTG+AGG | + | chr1.4:82531266-82531285 | MS.gene71643:CDS | 40.0% | |
| GATTTCACTTGAACAGGAAC+GGG | - | chr1.4:82530739-82530758 | None:intergenic | 40.0% | |
| GCAGACCATGCATATAAGAT+CGG | - | chr1.4:82534494-82534513 | None:intergenic | 40.0% | |
| GGATAAGTCACATAATCAGG+AGG | - | chr1.4:82533873-82533892 | None:intergenic | 40.0% | |
| GGATCTTGCTGCTACAATTA+AGG | + | chr1.4:82534218-82534237 | MS.gene71643:CDS | 40.0% | |
| GGCAAAAGGTAAGACAACAA+GGG | - | chr1.4:82532394-82532413 | None:intergenic | 40.0% | |
| GGCTCAGATTAAATGGCAAA+AGG | - | chr1.4:82532408-82532427 | None:intergenic | 40.0% | |
| GTACACGAGAACAAATTCGT+GGG | + | chr1.4:82531703-82531722 | MS.gene71643:intron | 40.0% | |
| GTACTCCGATCTTATATGCA+TGG | + | chr1.4:82534486-82534505 | MS.gene71643:intron | 40.0% | |
| GTATCTTTAGCACCAGGATT+GGG | - | chr1.4:82534159-82534178 | None:intergenic | 40.0% | |
| GTCAAATGCGAGTGAAACAT+GGG | + | chr1.4:82530971-82530990 | MS.gene71643:CDS | 40.0% | |
| GTGACTTATCCTTGTTCAGA+GGG | + | chr1.4:82533882-82533901 | MS.gene71643:intron | 40.0% | |
| GTTCCGACATTCATCATGTA+AGG | + | chr1.4:82535810-82535829 | MS.gene71643:CDS | 40.0% | |
| GTTGTGGTTGTTCTTCAACA+AGG | - | chr1.4:82530717-82530736 | None:intergenic | 40.0% | |
| TATGGTATGTCTCCTGCAAT+AGG | - | chr1.4:82534862-82534881 | None:intergenic | 40.0% | |
| TCAAATGCGAGTGAAACATG+GGG | + | chr1.4:82530972-82530991 | MS.gene71643:CDS | 40.0% | |
| TCAATACATGGGTCTTCCTT+CGG | + | chr1.4:82534098-82534117 | MS.gene71643:CDS | 40.0% | |
| TCATCGTCAGAATCATCTGA+AGG | - | chr1.4:82533964-82533983 | None:intergenic | 40.0% | |
| TCATCTAGGGGATACTATAC+TGG | - | chr1.4:82531796-82531815 | None:intergenic | 40.0% | |
| TCATCTTTGCAATCACATCC+TGG | - | chr1.4:82533522-82533541 | None:intergenic | 40.0% | |
| TCTGAGAAATTTGAGGATCC+AGG | + | chr1.4:82534066-82534085 | MS.gene71643:CDS | 40.0% | |
| TCTTCAGTATCTTTAGCACC+AGG | - | chr1.4:82534165-82534184 | None:intergenic | 40.0% | |
| TGCATGCATGTTGAGGTAAA+GGG | + | chr1.4:82535536-82535555 | MS.gene71643:intron | 40.0% | |
| TGGATCCTCAAATTTCTCAG+AGG | - | chr1.4:82534067-82534086 | None:intergenic | 40.0% | |
| TGGCAAAAGGTAAGACAACA+AGG | - | chr1.4:82532395-82532414 | None:intergenic | 40.0% | |
| TGTGACTTATCCTTGTTCAG+AGG | + | chr1.4:82533881-82533900 | MS.gene71643:intron | 40.0% | |
| TTATAATCCTGATGCTCCAG+AGG | + | chr1.4:82533987-82534006 | MS.gene71643:CDS | 40.0% | |
| TTGCATGCATGTTGAGGTAA+AGG | + | chr1.4:82535535-82535554 | MS.gene71643:intron | 40.0% | |
| TTGGATTCGTTATGTGCTGA+AGG | + | chr1.4:82533116-82533135 | MS.gene71643:CDS | 40.0% | |
| ! | AATGGTTTGGCAATTCTCGT+TGG | + | chr1.4:82535785-82535804 | MS.gene71643:CDS | 40.0% |
| ! | AGAATGCATCGATCCATGTT+TGG | + | chr1.4:82532230-82532249 | MS.gene71643:intron | 40.0% |
| ! | AGTTTTCTAACTAACCTCCC+AGG | - | chr1.4:82533598-82533617 | None:intergenic | 40.0% |
| ! | ATCTGCCTCTGAGAAATTTG+AGG | + | chr1.4:82534059-82534078 | MS.gene71643:CDS | 40.0% |
| ! | ATTTTCAGCTCCACTGTCAT+TGG | - | chr1.4:82535869-82535888 | None:intergenic | 40.0% |
| ! | ATTTTTCTCCACTTGTCTCC+TGG | - | chr1.4:82536023-82536042 | None:intergenic | 40.0% |
| ! | CTCCCTTATAGGTTGACAAA+TGG | + | chr1.4:82535767-82535786 | MS.gene71643:intron | 40.0% |
| ! | GACAGTTCATCGGTTATAGA+TGG | - | chr1.4:82534336-82534355 | None:intergenic | 40.0% |
| ! | GATTCTGTTTTCACTTGAGC+AGG | - | chr1.4:82530889-82530908 | None:intergenic | 40.0% |
| ! | GCTGTCTAAAATATTGGGAG+AGG | - | chr1.4:82534833-82534852 | None:intergenic | 40.0% |
| ! | GTAACAGTATCAATCGGTTC+AGG | - | chr1.4:82531099-82531118 | None:intergenic | 40.0% |
| ! | GTGCCTAATCTCCTTTTGAA+TGG | - | chr1.4:82535501-82535520 | None:intergenic | 40.0% |
| ! | TCAATCGGTTCAGGATCTTT+AGG | - | chr1.4:82531090-82531109 | None:intergenic | 40.0% |
| ! | TTTTTCGCAACATCTCCAGA+AGG | - | chr1.4:82530790-82530809 | None:intergenic | 40.0% |
| ! | TTTTTCTCCACTTGTCTCCT+GGG | - | chr1.4:82536022-82536041 | None:intergenic | 40.0% |
| !! | TCAAATCACTTTGGCTTGCA+TGG | + | chr1.4:82531873-82531892 | MS.gene71643:intron | 40.0% |
| !! | TCTCTCTCTTACTGATTCCT+GGG | + | chr1.4:82533578-82533597 | MS.gene71643:CDS | 40.0% |
| !!! | CATCCTTCAAGTGTTTTGGT+GGG | - | chr1.4:82535055-82535074 | None:intergenic | 40.0% |
| !!! | TGCAGAAGTGATTTTTTGGG+GGG | + | chr1.4:82535263-82535282 | MS.gene71643:intron | 40.0% |
| AAACCCCAAGCTCGAAGAAA+AGG | + | chr1.4:82536046-82536065 | MS.gene71643:CDS | 45.0% | |
| AATCATCTGAAGGAAGTCCC+AGG | - | chr1.4:82533954-82533973 | None:intergenic | 45.0% | |
| ACAAAGTGTGCTTGGTACTG+TGG | + | chr1.4:82530588-82530607 | MS.gene71643:CDS | 45.0% | |
| ACTTGGAGAAGCTGTTGTTC+AGG | + | chr1.4:82535114-82535133 | MS.gene71643:CDS | 45.0% | |
| AGACAGGTACACGGAAAGTA+AGG | - | chr1.4:82532195-82532214 | None:intergenic | 45.0% | |
| AGCACCCCAAATCTTACTAC+AGG | + | chr1.4:82532471-82532490 | MS.gene71643:intron | 45.0% | |
| AGCCAGAGAAGGAGATTCAA+CGG | + | chr1.4:82533039-82533058 | MS.gene71643:CDS | 45.0% | |
| AGGATTTGACTCCGGTTTCT+GGG | + | chr1.4:82534385-82534404 | MS.gene71643:CDS | 45.0% | |
| AGGCCATGAGGATCAATACA+TGG | + | chr1.4:82534086-82534105 | MS.gene71643:CDS | 45.0% | |
| AGGTAGTAATGCTTCACAGC+AGG | + | chr1.4:82535843-82535862 | MS.gene71643:CDS | 45.0% | |
| AGTACGGCGGGAATTATTTG+AGG | - | chr1.4:82534984-82535003 | None:intergenic | 45.0% | |
| ATAACTCCAGGGTCACCAAA+TGG | + | chr1.4:82534953-82534972 | MS.gene71643:CDS | 45.0% | |
| ATCTCCACTGGTGTGTCAAA+TGG | + | chr1.4:82531899-82531918 | MS.gene71643:intron | 45.0% | |
| CCAATTTGGTAAAACGGGTC+TGG | - | chr1.4:82532429-82532448 | None:intergenic | 45.0% | |
| CCATACTTGCATGCATGTTG+AGG | + | chr1.4:82535529-82535548 | MS.gene71643:intron | 45.0% | |
| CCGACATTCATCATGTAAGG+AGG | + | chr1.4:82535813-82535832 | MS.gene71643:CDS | 45.0% | |
| CCTCAACATGCATGCAAGTA+TGG | - | chr1.4:82535532-82535551 | None:intergenic | 45.0% | |
| CGATACTGAAGACAGGTACA+CGG | - | chr1.4:82532204-82532223 | None:intergenic | 45.0% | |
| CGATTTCACATCTGACTCTG+AGG | + | chr1.4:82534197-82534216 | MS.gene71643:CDS | 45.0% | |
| GAAACGAGTGATGCAGTTAC+TGG | + | chr1.4:82530835-82530854 | MS.gene71643:CDS | 45.0% | |
| GACAGAGAACAAAGTGTGCT+TGG | + | chr1.4:82530580-82530599 | MS.gene71643:CDS | 45.0% | |
| GAGCAGGAACAGATTGTGTT+TGG | - | chr1.4:82530873-82530892 | None:intergenic | 45.0% | |
| GGCCATGAGGATCAATACAT+GGG | + | chr1.4:82534087-82534106 | MS.gene71643:CDS | 45.0% | |
| GGTCAAATGCGAGTGAAACA+TGG | + | chr1.4:82530970-82530989 | MS.gene71643:CDS | 45.0% | |
| GTTAACTCAGAGTCATGGGA+GGG | - | chr1.4:82535738-82535757 | None:intergenic | 45.0% | |
| TAGTAGCCAACACTTTGGTC+TGG | - | chr1.4:82533301-82533320 | None:intergenic | 45.0% | |
| TCACCCACCAAAACACTTGA+AGG | + | chr1.4:82535049-82535068 | MS.gene71643:CDS | 45.0% | |
| TCATCCTCTGAATCTTCCGA+AGG | - | chr1.4:82534117-82534136 | None:intergenic | 45.0% | |
| TCTACTTGGAGTAGCAGTGT+CGG | - | chr1.4:82534912-82534931 | None:intergenic | 45.0% | |
| TCTTCCTTCGGAAGATTCAG+AGG | + | chr1.4:82534110-82534129 | MS.gene71643:CDS | 45.0% | |
| TCTTTAGCAGAGCCAGATCT+TGG | + | chr1.4:82534357-82534376 | MS.gene71643:CDS | 45.0% | |
| TGACCGCCAAAATAACTCCA+GGG | + | chr1.4:82534942-82534961 | MS.gene71643:CDS | 45.0% | |
| TGGTGAAGAGGATTTGACTC+CGG | + | chr1.4:82534377-82534396 | MS.gene71643:CDS | 45.0% | |
| TGTGGCACAAACACTGTGAA+TGG | - | chr1.4:82532625-82532644 | None:intergenic | 45.0% | |
| TTATTGCTTGTGCCAGCTAC+CGG | - | chr1.4:82536141-82536160 | None:intergenic | 45.0% | |
| TTCAGCTCGATACTGAAGAC+AGG | - | chr1.4:82532211-82532230 | None:intergenic | 45.0% | |
| TTTGATTGCTTACCGGTAGC+TGG | + | chr1.4:82536126-82536145 | MS.gene71643:CDS | 45.0% | |
| ! | ATGTATTGATCCTCATGGCC+TGG | - | chr1.4:82534087-82534106 | None:intergenic | 45.0% |
| ! | ATTTTCAGCTCCGCTTTCAC+TGG | - | chr1.4:82535917-82535936 | None:intergenic | 45.0% |
| ! | CCAGACCCGTTTTACCAAAT+TGG | + | chr1.4:82532426-82532445 | MS.gene71643:intron | 45.0% |
| ! | CGTGCATCCTTCAAGTGTTT+TGG | - | chr1.4:82535059-82535078 | None:intergenic | 45.0% |
| ! | CTTCCTTTTCTTCGAGCTTG+GGG | - | chr1.4:82536052-82536071 | None:intergenic | 45.0% |
| ! | GACCCATGTATTGATCCTCA+TGG | - | chr1.4:82534092-82534111 | None:intergenic | 45.0% |
| ! | GCTTCCTTTTCTTCGAGCTT+GGG | - | chr1.4:82536053-82536072 | None:intergenic | 45.0% |
| ! | TGAAGCATTACTACCTGGAC+TGG | - | chr1.4:82535839-82535858 | None:intergenic | 45.0% |
| ! | TGCTGTGAAGCATTACTACC+TGG | - | chr1.4:82535844-82535863 | None:intergenic | 45.0% |
| ! | TGGTGACCCTGGAGTTATTT+TGG | - | chr1.4:82534951-82534970 | None:intergenic | 45.0% |
| ! | TTGCGCCAAGCTTTCTTTTG+CGG | - | chr1.4:82535642-82535661 | None:intergenic | 45.0% |
| !! | ACTGGGACTCACTTTTCAAC+AGG | + | chr1.4:82535664-82535683 | MS.gene71643:CDS | 45.0% |
| !! | GAGATTGATAGCGAGGATGT+AGG | + | chr1.4:82533173-82533192 | MS.gene71643:intron | 45.0% |
| !! | GCATCCTTCAAGTGTTTTGG+TGG | - | chr1.4:82535056-82535075 | None:intergenic | 45.0% |
| !! | GGACTCACTTTTCAACAGGT+AGG | + | chr1.4:82535668-82535687 | MS.gene71643:intron | 45.0% |
| !! | GTCTCTCTCTTACTGATTCC+TGG | + | chr1.4:82533577-82533596 | MS.gene71643:CDS | 45.0% |
| !! | TACAGCTGCTGGAAGTATCT+TGG | + | chr1.4:82533921-82533940 | MS.gene71643:CDS | 45.0% |
| !!! | AAGTGATTTTTTGGGGGGAG+AGG | + | chr1.4:82535268-82535287 | MS.gene71643:intron | 45.0% |
| !!! | AGTGATTTTTTGGGGGGAGA+GGG | + | chr1.4:82535269-82535288 | MS.gene71643:intron | 45.0% |
| !!! | TGACCCTGGAGTTATTTTGG+CGG | - | chr1.4:82534948-82534967 | None:intergenic | 45.0% |
| !! | AATACTATAAATAAATATAT+TGG | + | chr1.4:82535346-82535365 | MS.gene71643:intron | 5.0% |
| !!! | TTCTTTTAATTATTATTTTT+TGG | + | chr1.4:82533839-82533858 | MS.gene71643:intron | 5.0% |
| ACGGACCGCAAAAGAAAGCT+TGG | + | chr1.4:82535634-82535653 | MS.gene71643:CDS | 50.0% | |
| ACTGCATCTCTCATTTCGCC+AGG | - | chr1.4:82530688-82530707 | None:intergenic | 50.0% | |
| AGAAAGCTTGGCGCAAGAAC+TGG | + | chr1.4:82535646-82535665 | MS.gene71643:CDS | 50.0% | |
| AGAGCCAGATCTTGGTGAAG+AGG | + | chr1.4:82534365-82534384 | MS.gene71643:CDS | 50.0% | |
| AGGAGATAATGCTTCGCAGC+AGG | + | chr1.4:82535891-82535910 | MS.gene71643:CDS | 50.0% | |
| ATGCTTATTCTGGTGAGGGC+TGG | + | chr1.4:82531271-82531290 | MS.gene71643:CDS | 50.0% | |
| ATGGAGGATCCAAACAGAGC+TGG | - | chr1.4:82533370-82533389 | None:intergenic | 50.0% | |
| ATTTGAGGATCCAGGCCATG+AGG | + | chr1.4:82534074-82534093 | MS.gene71643:CDS | 50.0% | |
| CGGGAAAAACCCTCTGAACA+AGG | - | chr1.4:82533894-82533913 | None:intergenic | 50.0% | |
| CTCACCATTTGACACACCAG+TGG | - | chr1.4:82531906-82531925 | None:intergenic | 50.0% | |
| CTGACCGCCAAAATAACTCC+AGG | + | chr1.4:82534941-82534960 | MS.gene71643:CDS | 50.0% | |
| CTTGAAGGATGCACGGAATC+TGG | + | chr1.4:82535064-82535083 | MS.gene71643:CDS | 50.0% | |
| CTTGTTTCCCAGGAGACAAG+TGG | + | chr1.4:82536012-82536031 | MS.gene71643:CDS | 50.0% | |
| GAAAGCTTGGCGCAAGAACT+GGG | + | chr1.4:82535647-82535666 | MS.gene71643:CDS | 50.0% | |
| GAACAACTGATGCGCTAGCT+CGG | - | chr1.4:82532507-82532526 | None:intergenic | 50.0% | |
| GACAGCGGAGGTGAAAACAA+AGG | + | chr1.4:82535973-82535992 | MS.gene71643:CDS | 50.0% | |
| GACAGCTGTGTTCCTATTGC+AGG | + | chr1.4:82534847-82534866 | MS.gene71643:intron | 50.0% | |
| GAGGATTTGACTCCGGTTTC+TGG | + | chr1.4:82534384-82534403 | MS.gene71643:CDS | 50.0% | |
| GCCAGAGAAGGAGATTCAAC+GGG | + | chr1.4:82533040-82533059 | MS.gene71643:CDS | 50.0% | |
| GCGTTGCAGAATTTCGGACT+TGG | - | chr1.4:82533066-82533085 | None:intergenic | 50.0% | |
| GGTTAACTCAGAGTCATGGG+AGG | - | chr1.4:82535739-82535758 | None:intergenic | 50.0% | |
| GGTTTGGCAATTCTCGTTGG+AGG | + | chr1.4:82535788-82535807 | MS.gene71643:CDS | 50.0% | |
| TATTCTGGTGAGGGCTGGAA+AGG | + | chr1.4:82531276-82531295 | MS.gene71643:CDS | 50.0% | |
| TGATGTCACATCTGCACCGT+TGG | + | chr1.4:82534263-82534282 | MS.gene71643:CDS | 50.0% | |
| TGGCATACACGGGATAAGCT+TGG | - | chr1.4:82532529-82532548 | None:intergenic | 50.0% | |
| TGTGACATCATCTTGTCCGG+TGG | - | chr1.4:82534253-82534272 | None:intergenic | 50.0% | |
| TTCGCAACATCTCCAGAAGG+TGG | - | chr1.4:82530787-82530806 | None:intergenic | 50.0% | |
| ! | ATGCTGATGGGTGTTCCTCT+TGG | - | chr1.4:82535008-82535027 | None:intergenic | 50.0% |
| ! | CGCTTCCTTTTCTTCGAGCT+TGG | - | chr1.4:82536054-82536073 | None:intergenic | 50.0% |
| ! | CGGGTCTGGCTCAGATTAAA+TGG | - | chr1.4:82532415-82532434 | None:intergenic | 50.0% |
| ! | CTTTCTTTTGCGGTCCGTTC+TGG | - | chr1.4:82535632-82535651 | None:intergenic | 50.0% |
| ! | GGAGCATCAACTTGTTTCCC+AGG | + | chr1.4:82536002-82536021 | MS.gene71643:CDS | 50.0% |
| !! | ACTTGAACAGGAACGGGTTG+TGG | - | chr1.4:82530733-82530752 | None:intergenic | 50.0% |
| !! | CTCTCTTACTGATTCCTGGG+AGG | + | chr1.4:82533581-82533600 | MS.gene71643:CDS | 50.0% |
| !! | TGAGGGAGAGATTGATAGCG+AGG | + | chr1.4:82533166-82533185 | MS.gene71643:CDS | 50.0% |
| AACAGAGCTGGTGATACCCG+CGG | - | chr1.4:82533358-82533377 | None:intergenic | 55.0% | |
| ACAGTTCCACCTGGCGATGA+GGG | + | chr1.4:82533486-82533505 | MS.gene71643:intron | 55.0% | |
| AGCCCTGCTTCAGATGTCTG+CGG | - | chr1.4:82536087-82536106 | None:intergenic | 55.0% | |
| CATAACCAACCCTCATCGCC+AGG | - | chr1.4:82533498-82533517 | None:intergenic | 55.0% | |
| CCAGAGGATGCGAAGGTTGA+AGG | + | chr1.4:82534003-82534022 | MS.gene71643:CDS | 55.0% | |
| CCTTCAACCTTCGCATCCTC+TGG | - | chr1.4:82534006-82534025 | None:intergenic | 55.0% | |
| CGGGTATCACCAGCTCTGTT+TGG | + | chr1.4:82533358-82533377 | MS.gene71643:CDS | 55.0% | |
| CTTGCATGGTGCATCTCCAC+TGG | + | chr1.4:82531887-82531906 | MS.gene71643:intron | 55.0% | |
| GAGCTACTGGATCCACCTTC+TGG | + | chr1.4:82530772-82530791 | MS.gene71643:CDS | 55.0% | |
| GAGGATGCGAAGGTTGAAGG+AGG | + | chr1.4:82534006-82534025 | MS.gene71643:CDS | 55.0% | |
| GCCCGTTGAATCTCCTTCTC+TGG | - | chr1.4:82533044-82533063 | None:intergenic | 55.0% | |
| GGGTGTTCCTCTTGGCAGTA+CGG | - | chr1.4:82535000-82535019 | None:intergenic | 55.0% | |
| GTGAGGGCTGGAAAGGATAC+AGG | + | chr1.4:82531283-82531302 | MS.gene71643:CDS | 55.0% | |
| TACAGTTCCACCTGGCGATG+AGG | + | chr1.4:82533485-82533504 | MS.gene71643:intron | 55.0% | |
| TCACAGCAGGCCAATGACAG+TGG | + | chr1.4:82535856-82535875 | MS.gene71643:CDS | 55.0% | |
| TCATGTAAGGAGGCCAGTCC+AGG | + | chr1.4:82535823-82535842 | MS.gene71643:CDS | 55.0% | |
| TCCAGCAGCTGTAGCTGCTT+CGG | - | chr1.4:82533914-82533933 | None:intergenic | 55.0% | |
| TGATGCTCCAGAGGATGCGA+AGG | + | chr1.4:82533996-82534015 | MS.gene71643:CDS | 55.0% | |
| TGTTCCTCTTGGCAGTACGG+CGG | - | chr1.4:82534997-82535016 | None:intergenic | 55.0% | |
| ! | AGCACCAGGATTGGGAGCAT+CGG | - | chr1.4:82534151-82534170 | None:intergenic | 55.0% |
| ! | AGCCGCAGACATCTGAAGCA+GGG | + | chr1.4:82536082-82536101 | MS.gene71643:CDS | 55.0% |
| ! | GCGTTTCCATTTGGTGACCC+TGG | - | chr1.4:82534962-82534981 | None:intergenic | 55.0% |
| ! | GTTTTCACCTCCGCTGTCAG+TGG | - | chr1.4:82535971-82535990 | None:intergenic | 55.0% |
| ! | TGTGATGGTGCTTGTGACCG+CGG | + | chr1.4:82533338-82533357 | MS.gene71643:CDS | 55.0% |
| !! | GAAGCAGGGCTGGTCCATAA+CGG | + | chr1.4:82536096-82536115 | MS.gene71643:CDS | 55.0% |
| !! | GATGAGGGTTGGTTATGCCC+AGG | + | chr1.4:82533501-82533520 | MS.gene71643:CDS | 55.0% |
| !! | TTCGCATCCTCTGGAGCATC+AGG | - | chr1.4:82533997-82534016 | None:intergenic | 55.0% |
| AACCAACCCTCATCGCCAGG+TGG | - | chr1.4:82533495-82533514 | None:intergenic | 60.0% | |
| ATTCCCGCCGTACTGCCAAG+AGG | + | chr1.4:82534990-82535009 | MS.gene71643:CDS | 60.0% | |
| CCAGCAGCTGTAGCTGCTTC+GGG | - | chr1.4:82533913-82533932 | None:intergenic | 60.0% | |
| CTGCGGCTTACAGTTCCACC+TGG | + | chr1.4:82533477-82533496 | MS.gene71643:intron | 60.0% | |
| GAAGCAGCGACAGAGCTCTG+CGG | + | chr1.4:82531043-82531062 | MS.gene71643:CDS | 60.0% | |
| GATCCCGATGCTCCCAATCC+TGG | + | chr1.4:82534144-82534163 | MS.gene71643:CDS | 60.0% | |
| GTTCCTCTTGGCAGTACGGC+GGG | - | chr1.4:82534996-82535015 | None:intergenic | 60.0% | |
| TCGCAGCAAGCCACTGACAG+CGG | + | chr1.4:82535958-82535977 | MS.gene71643:CDS | 60.0% | |
| TCGCAGCAGGCCAGTGAAAG+CGG | + | chr1.4:82535904-82535923 | MS.gene71643:CDS | 60.0% | |
| TTCCACCTGGCGATGAGGGT+TGG | + | chr1.4:82533490-82533509 | MS.gene71643:CDS | 60.0% | |
| ! | GAGCCGCAGACATCTGAAGC+AGG | + | chr1.4:82536081-82536100 | MS.gene71643:CDS | 60.0% |
| ! | GCAGACATCTGAAGCAGGGC+TGG | + | chr1.4:82536086-82536105 | MS.gene71643:CDS | 60.0% |
| ! | GTGATGGTGCTTGTGACCGC+GGG | + | chr1.4:82533339-82533358 | MS.gene71643:CDS | 60.0% |
| !! | GCACCAGGATTGGGAGCATC+GGG | - | chr1.4:82534150-82534169 | None:intergenic | 60.0% |
| CAGCAAGCCACTGACAGCGG+AGG | + | chr1.4:82535961-82535980 | MS.gene71643:CDS | 65.0% | |
| CCCGAAGCAGCTACAGCTGC+TGG | + | chr1.4:82533910-82533929 | MS.gene71643:CDS | 65.0% | |
| GCGACAGAGCTCTGCGGTCG+AGG | + | chr1.4:82531049-82531068 | MS.gene71643:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 82530466 | 82536185 | 82530466 | ID=MS.gene71643 |
| chr1.4 | mRNA | 82530466 | 82536185 | 82530466 | ID=MS.gene71643.t1;Parent=MS.gene71643 |
| chr1.4 | exon | 82530466 | 82531304 | 82530466 | ID=MS.gene71643.t1.exon1;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82530466 | 82531304 | 82530466 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82533025 | 82533190 | 82533025 | ID=MS.gene71643.t1.exon2;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82533025 | 82533190 | 82533025 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82533281 | 82533404 | 82533281 | ID=MS.gene71643.t1.exon3;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82533281 | 82533404 | 82533281 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82533490 | 82533602 | 82533490 | ID=MS.gene71643.t1.exon4;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82533490 | 82533602 | 82533490 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82533901 | 82534449 | 82533901 | ID=MS.gene71643.t1.exon5;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82533901 | 82534449 | 82533901 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82534869 | 82535135 | 82534869 | ID=MS.gene71643.t1.exon6;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82534869 | 82535135 | 82534869 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82535596 | 82535685 | 82535596 | ID=MS.gene71643.t1.exon7;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82535596 | 82535685 | 82535596 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| chr1.4 | exon | 82535778 | 82536185 | 82535778 | ID=MS.gene71643.t1.exon8;Parent=MS.gene71643.t1 |
| chr1.4 | CDS | 82535778 | 82536185 | 82535778 | ID=cds.MS.gene71643.t1;Parent=MS.gene71643.t1 |
| Gene Sequence |
| Protein sequence |
