AlfalfaGEDB | MS.gene060702

M. sativa cultivar XinJiangDaYe / MS.gene060702

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060702.t1	XP_013467304.1	81.2	96	14	1	40	135	5	96	2.30E-33	151.8

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060702.t1	I3S1M4	81.2	96	14	1	40	135	5	96	1.7e-33	151.8

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050320	MS.gene060702	0.813498	2.48E-51	-1.69E-46
MS.gene051245	MS.gene060702	0.804701	1.90E-49	-1.69E-46
MS.gene051748	MS.gene060702	0.800941	1.14E-48	-1.69E-46
MS.gene051757	MS.gene060702	0.813072	3.08E-51	-1.69E-46
MS.gene053109	MS.gene060702	0.826708	2.34E-54	-1.69E-46
MS.gene053381	MS.gene060702	0.800658	1.30E-48	-1.69E-46
MS.gene055311	MS.gene060702	0.803419	3.52E-49	-1.69E-46
MS.gene060465	MS.gene060702	0.802081	6.64E-49	-1.69E-46
MS.gene060702	MS.gene061055	0.836382	9.67E-57	-1.69E-46
MS.gene060702	MS.gene062605	0.835842	1.33E-56	-1.69E-46
MS.gene060702	MS.gene064071	0.835962	1.24E-56	-1.69E-46
MS.gene060702	MS.gene064072	0.83552	1.60E-56	-1.69E-46
MS.gene060702	MS.gene066427	0.829113	6.17E-55	-1.69E-46
MS.gene060702	MS.gene068164	0.848648	5.36E-60	-1.69E-46
MS.gene060702	MS.gene068166	0.806809	6.87E-50	-1.69E-46
MS.gene060702	MS.gene069199	0.807829	4.18E-50	-1.69E-46
MS.gene060702	MS.gene06989	0.808426	3.12E-50	-1.69E-46
MS.gene060702	MS.gene070222	0.837442	5.18E-57	-1.69E-46
MS.gene060702	MS.gene074000	0.816816	4.55E-52	-1.69E-46
MS.gene060702	MS.gene074369	0.825199	5.34E-54	-1.69E-46
MS.gene060702	MS.gene07552	0.808312	3.30E-50	-1.69E-46
MS.gene060702	MS.gene09032	0.829745	4.33E-55	-1.69E-46
MS.gene060702	MS.gene22968	0.806111	9.64E-50	-1.69E-46
MS.gene060702	MS.gene24102	0.8244	8.24E-54	-1.69E-46
MS.gene060702	MS.gene24561	0.825342	4.94E-54	-1.69E-46
MS.gene060702	MS.gene24597	0.81006	1.39E-50	-1.69E-46
MS.gene060702	MS.gene25942	0.820818	5.61E-53	-1.69E-46
MS.gene060702	MS.gene26584	0.800016	1.76E-48	-1.69E-46
MS.gene060702	MS.gene27678	0.860068	2.67E-63	-1.69E-46
MS.gene060702	MS.gene32093	0.802136	6.47E-49	-1.69E-46
MS.gene060702	MS.gene34893	0.805604	1.23E-49	-1.69E-46
MS.gene060702	MS.gene38261	0.806369	8.51E-50	-1.69E-46
MS.gene060702	MS.gene40918	0.800401	1.47E-48	-1.69E-46
MS.gene060702	MS.gene41741	0.800085	1.70E-48	-1.69E-46
MS.gene060702	MS.gene43602	0.808142	3.58E-50	-1.69E-46
MS.gene060702	MS.gene44260	0.836557	8.73E-57	-1.69E-46
MS.gene060702	MS.gene48256	0.822076	2.87E-53	-1.69E-46
MS.gene060702	MS.gene49816	0.830608	2.67E-55	-1.69E-46
MS.gene060702	MS.gene50365	0.814769	1.30E-51	-1.69E-46
MS.gene060702	MS.gene51658	0.827703	1.35E-54	-1.69E-46
MS.gene060702	MS.gene51920	0.802488	5.48E-49	-1.69E-46
MS.gene060702	MS.gene51990	0.811626	6.37E-51	-1.69E-46
MS.gene060702	MS.gene52153	0.804511	2.09E-49	-1.69E-46
MS.gene060702	MS.gene52281	0.80192	7.17E-49	-1.69E-46
MS.gene060702	MS.gene55282	0.818059	2.39E-52	-1.69E-46
MS.gene060702	MS.gene55530	0.832939	7.10E-56	-1.69E-46
MS.gene060702	MS.gene57210	0.811846	5.71E-51	-1.69E-46
MS.gene060702	MS.gene58693	0.812461	4.19E-51	-1.69E-46
MS.gene060702	MS.gene59979	0.804249	2.37E-49	-1.69E-46
MS.gene060702	MS.gene60300	0.807001	6.25E-50	-1.69E-46
MS.gene060702	MS.gene60372	0.819988	8.70E-53	-1.69E-46
MS.gene060702	MS.gene61542	0.81162	6.39E-51	-1.69E-46
MS.gene060702	MS.gene61682	0.842647	2.28E-58	-1.69E-46
MS.gene060702	MS.gene61916	0.810893	9.19E-51	-1.69E-46
MS.gene060702	MS.gene65412	0.815192	1.05E-51	-1.69E-46
MS.gene060702	MS.gene65518	0.816394	5.66E-52	-1.69E-46
MS.gene060702	MS.gene66089	0.825822	3.80E-54	-1.69E-46
MS.gene060702	MS.gene67107	0.811233	7.75E-51	-1.69E-46
MS.gene060702	MS.gene68171	0.836975	6.83E-57	-1.69E-46
MS.gene060702	MS.gene68810	0.833772	4.40E-56	-1.69E-46
MS.gene060702	MS.gene70305	0.826991	2.00E-54	-1.69E-46
MS.gene060702	MS.gene70613	0.819955	8.85E-53	-1.69E-46
MS.gene060702	MS.gene70836	0.801282	9.69E-49	-1.69E-46
MS.gene060702	MS.gene71643	0.81097	8.84E-51	-1.69E-46
MS.gene060702	MS.gene72933	0.805261	1.45E-49	-1.69E-46
MS.gene060702	MS.gene73643	0.805289	1.43E-49	-1.69E-46
MS.gene060702	MS.gene74458	0.811881	5.61E-51	-1.69E-46
MS.gene060702	MS.gene74854	0.826391	2.78E-54	-1.69E-46
MS.gene060702	MS.gene74938	0.806064	9.86E-50	-1.69E-46
MS.gene060702	MS.gene76478	0.838057	3.61E-57	-1.69E-46
MS.gene060702	MS.gene79605	0.836377	9.70E-57	-1.69E-46
MS.gene060702	MS.gene81141	0.806345	8.60E-50	-1.69E-46
MS.gene060702	MS.gene81285	0.811498	6.79E-51	-1.69E-46
MS.gene060702	MS.gene83305	0.837457	5.14E-57	-1.69E-46
MS.gene060702	MS.gene87018	0.815735	7.94E-52	-1.69E-46
MS.gene060702	MS.gene87399	0.833534	5.05E-56	-1.69E-46
MS.gene060702	MS.gene87972	0.814375	1.59E-51	-1.69E-46
MS.gene060702	MS.gene88427	0.800582	1.35E-48	-1.69E-46
MS.gene060702	MS.gene88976	0.811991	5.31E-51	-1.69E-46
MS.gene060702	MS.gene91524	0.83638	9.68E-57	-1.69E-46
MS.gene060702	MS.gene91526	0.832026	1.20E-55	-1.69E-46
MS.gene060702	MS.gene92572	0.816482	5.41E-52	-1.69E-46
MS.gene060702	MS.gene92818	0.844632	6.71E-59	-1.69E-46
MS.gene060702	MS.gene92819	0.8376	4.72E-57	-1.69E-46
MS.gene060702	MS.gene94949	0.813376	2.64E-51	-1.69E-46
MS.gene060702	MS.gene94992	0.827151	1.83E-54	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060702.t1	MTR_1g048960	100.000	70	0	0	66	135	27	96	2.25e-47	148

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene060702.t1	AT1G72020	67.949	78	24	1	59	135	20	97	9.61e-34	114

Find 43 sgRNAs with CRISPR-Local

Find 80 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGAAATGGGCATGCTGGTTT+TGG	0.279633	1.3:+31222201	None:intergenic
CTTGGACAAGATGAAGTATC+AGG	0.339393	1.3:-31221741	MS.gene060702:CDS
CCGATGCCACCCCATTGAAA+TGG	0.344424	1.3:+31222186	None:intergenic
ATCCCCATCAAGCAACCAAC+AGG	0.385635	1.3:-31222250	MS.gene060702:CDS
GGCTGGAAAACATTCTTTGT+TGG	0.400005	1.3:-31222165	MS.gene060702:CDS
AACCCTGTTGGTTGCTTGAT+GGG	0.409014	1.3:+31222247	None:intergenic
TTCAATGGGGTGGCATCGGC+TGG	0.413325	1.3:-31222182	MS.gene060702:CDS
ACCAGCATGCCCATTTCAAT+GGG	0.415172	1.3:-31222196	MS.gene060702:CDS
ACCACCAATGGCAATGTTGT+TGG	0.419322	1.3:+31222127	None:intergenic
AACCAGCATGCCCATTTCAA+TGG	0.434819	1.3:-31222197	MS.gene060702:CDS
CAGCAAAAGAAGACAGCATC+TGG	0.440272	1.3:-31221644	MS.gene060702:CDS
TTTGGAGCCTCAAAAGTAGT+TGG	0.442515	1.3:+31222219	None:intergenic
CCCCATTGAAATGGGCATGC+TGG	0.448377	1.3:+31222195	None:intergenic
AAAACATTCTTTGTTGGCTG+TGG	0.450377	1.3:-31222159	MS.gene060702:CDS
GAACCCTGTTGGTTGCTTGA+TGG	0.450900	1.3:+31222246	None:intergenic
CGATGCCACCCCATTGAAAT+GGG	0.461617	1.3:+31222187	None:intergenic
AAGAGGATGGGAGGCGGACA+TGG	0.489860	1.3:-31221806	MS.gene060702:CDS
GTGTTCACAGCTTTCAGCAT+TGG	0.501579	1.3:-31221698	MS.gene060702:CDS
CCATTTCAATGGGGTGGCAT+CGG	0.502593	1.3:-31222186	MS.gene060702:CDS
TGGGTTCAGAATTAAACTCC+TGG	0.515451	1.3:-31222445	MS.gene060702:CDS
TTCAACTGGCGTGAAGAGGA+TGG	0.515922	1.3:-31221819	MS.gene060702:CDS
ACCCTGTTGGTTGCTTGATG+GGG	0.526542	1.3:+31222248	None:intergenic
GCCAACAACATTGCCATTGG+TGG	0.527263	1.3:-31222128	MS.gene060702:intron
TGCATATCACATGTACAACT+TGG	0.529028	1.3:-31221759	MS.gene060702:CDS
TTCATTCAACTGGCGTGAAG+AGG	0.543901	1.3:-31221823	MS.gene060702:CDS
AAACATTCTTTGTTGGCTGT+GGG	0.549894	1.3:-31222158	MS.gene060702:CDS
GGCGTGAAGAGGATGGGAGG+CGG	0.552929	1.3:-31221812	MS.gene060702:CDS
TGGGCCACACCTACCACCAA+TGG	0.561598	1.3:+31222115	None:intergenic
TCAACTGGCGTGAAGAGGAT+GGG	0.574066	1.3:-31221818	MS.gene060702:CDS
GCATATACTCTGGTTCGCTA+TGG	0.578575	1.3:+31221783	None:intergenic
AAAGCCAACAACATTGCCAT+TGG	0.580536	1.3:-31222131	MS.gene060702:CDS
TGGAAAATGACTGCATACAC+AGG	0.585917	1.3:+31221665	None:intergenic
TTCAGAATTAAACTCCTGGA+AGG	0.586793	1.3:-31222441	MS.gene060702:CDS
GCATGCCCATTTCAATGGGG+TGG	0.604000	1.3:-31222192	MS.gene060702:CDS
TTGGACAAGATGAAGTATCA+GGG	0.612137	1.3:-31221740	MS.gene060702:CDS
AGCCTCAAAAGTAGTTGGAG+AGG	0.641705	1.3:+31222224	None:intergenic
TCAGAATTAAACTCCTGGAA+GGG	0.648897	1.3:-31222440	MS.gene060702:CDS
TATGTTGTGACAGTGAGTAG+AGG	0.651791	1.3:-31221848	MS.gene060702:intron
TGATATGCATGCATATACTC+TGG	0.665333	1.3:+31221773	None:intergenic
ACTGGCGTGAAGAGGATGGG+AGG	0.672984	1.3:-31221815	MS.gene060702:CDS
TAGTTGGAGAGGAACCCTGT+TGG	0.689517	1.3:+31222235	None:intergenic
TCCCCATCAAGCAACCAACA+GGG	0.694599	1.3:-31222249	MS.gene060702:CDS
CCAGCATGCCCATTTCAATG+GGG	0.765092	1.3:-31222195	MS.gene060702:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGAAAGAAAAAAAATCA+TGG	+	chr1.3:31221733-31221752	None:intergenic	15.0%
!!	TTTTTACGTGAAAATGAAAG+AGG	+	chr1.3:31222132-31222151	None:intergenic	25.0%
	AGCCATTGGATTAAAATAGA+TGG	+	chr1.3:31222101-31222120	None:intergenic	30.0%
	TGATTGGGCATACAAAATAT+TGG	-	chr1.3:31222040-31222059	MS.gene060702:intron	30.0%
!	TCTCTTGTTTAAAGATGACT+AGG	-	chr1.3:31222171-31222190	MS.gene060702:CDS	30.0%
!!!	AGCCATCTATTTTAATCCAA+TGG	-	chr1.3:31222096-31222115	MS.gene060702:intron	30.0%
	AAAAAGATGCATCAATGGTG+GGG	-	chr1.3:31221687-31221706	MS.gene060702:CDS	35.0%
	AGAAAAAGATGCATCAATGG+TGG	-	chr1.3:31221685-31221704	MS.gene060702:CDS	35.0%
	ATGTTAAGCCAGTTCTTGAT+TGG	-	chr1.3:31222024-31222043	MS.gene060702:intron	35.0%
	GAAAAAGATGCATCAATGGT+GGG	-	chr1.3:31221686-31221705	MS.gene060702:CDS	35.0%
	GTGAGAAAAAGATGCATCAA+TGG	-	chr1.3:31221682-31221701	MS.gene060702:CDS	35.0%
	TCAGAATTAAACTCCTGGAA+GGG	-	chr1.3:31221646-31221665	MS.gene060702:CDS	35.0%
	TGATATGCATGCATATACTC+TGG	+	chr1.3:31222316-31222335	None:intergenic	35.0%
	TGCATATCACATGTACAACT+TGG	-	chr1.3:31222327-31222346	MS.gene060702:intron	35.0%
	TGTTAAGCCAGTTCTTGATT+GGG	-	chr1.3:31222025-31222044	MS.gene060702:intron	35.0%
	TTCAGAATTAAACTCCTGGA+AGG	-	chr1.3:31221645-31221664	MS.gene060702:CDS	35.0%
!	AAAACATTCTTTGTTGGCTG+TGG	-	chr1.3:31221927-31221946	MS.gene060702:intron	35.0%
!	AAACATTCTTTGTTGGCTGT+GGG	-	chr1.3:31221928-31221947	MS.gene060702:intron	35.0%
!	AGTAGAGGTTTTCATTCAAC+TGG	-	chr1.3:31222253-31222272	MS.gene060702:CDS	35.0%
!	TTGGACAAGATGAAGTATCA+GGG	-	chr1.3:31222346-31222365	MS.gene060702:intron	35.0%
	AAAAGATGCATCAATGGTGG+GGG	-	chr1.3:31221688-31221707	MS.gene060702:CDS	40.0%
	AAAGCCAACAACATTGCCAT+TGG	-	chr1.3:31221955-31221974	MS.gene060702:intron	40.0%
	ATACAAAATATTGGCGCGTG+AGG	-	chr1.3:31222049-31222068	MS.gene060702:intron	40.0%
	GGCTGGAAAACATTCTTTGT+TGG	-	chr1.3:31221921-31221940	MS.gene060702:intron	40.0%
	GTTAGTGGCATACTTGTATG+TGG	-	chr1.3:31221806-31221825	MS.gene060702:CDS	40.0%
	TATGTTGTGACAGTGAGTAG+AGG	-	chr1.3:31222238-31222257	MS.gene060702:CDS	40.0%
	TGGAAAATGACTGCATACAC+AGG	+	chr1.3:31222424-31222443	None:intergenic	40.0%
	TGGGTTCAGAATTAAACTCC+TGG	-	chr1.3:31221641-31221660	MS.gene060702:CDS	40.0%
	TTGTATGCCCAATCAAGAAC+TGG	+	chr1.3:31222035-31222054	None:intergenic	40.0%
!	AAGAGGTTCTAGTTAGCCAT+TGG	+	chr1.3:31222115-31222134	None:intergenic	40.0%
!	CTTGGACAAGATGAAGTATC+AGG	-	chr1.3:31222345-31222364	MS.gene060702:intron	40.0%
!	TTTGGAGCCTCAAAAGTAGT+TGG	+	chr1.3:31221870-31221889	None:intergenic	40.0%
!!	TTCCTCTCCAACTACTTTTG+AGG	-	chr1.3:31221860-31221879	MS.gene060702:intron	40.0%
	AACCAGCATGCCCATTTCAA+TGG	-	chr1.3:31221889-31221908	MS.gene060702:intron	45.0%
	ACCACCAATGGCAATGTTGT+TGG	+	chr1.3:31221962-31221981	None:intergenic	45.0%
	ACCAGCATGCCCATTTCAAT+GGG	-	chr1.3:31221890-31221909	MS.gene060702:intron	45.0%
	AGCCTCAAAAGTAGTTGGAG+AGG	+	chr1.3:31221865-31221884	None:intergenic	45.0%
	AGGGGATGAATCAGTTTCAG+GGG	-	chr1.3:31221998-31222017	MS.gene060702:intron	45.0%
	ATGCTTGGCATCTTCGTTAG+TGG	-	chr1.3:31221791-31221810	MS.gene060702:CDS	45.0%
	CAGCAAAAGAAGACAGCATC+TGG	-	chr1.3:31222442-31222461	MS.gene060702:CDS	45.0%
	GAGGGGATGAATCAGTTTCA+GGG	-	chr1.3:31221997-31222016	MS.gene060702:intron	45.0%
	GCGCTAGAGAGTTATATGCT+TGG	-	chr1.3:31221776-31221795	MS.gene060702:CDS	45.0%
	GGCATACTTGTATGTGGTAG+TGG	-	chr1.3:31221812-31221831	MS.gene060702:CDS	45.0%
	GTGTTCACAGCTTTCAGCAT+TGG	-	chr1.3:31222388-31222407	MS.gene060702:intron	45.0%
	TCTAGCGCACATTCTCATCT+TGG	+	chr1.3:31221764-31221783	None:intergenic	45.0%
	TTCATTCAACTGGCGTGAAG+AGG	-	chr1.3:31222263-31222282	MS.gene060702:intron	45.0%
!	AACCCTGTTGGTTGCTTGAT+GGG	+	chr1.3:31221842-31221861	None:intergenic	45.0%
!	ACAACATTGCCATTGGTGGT+AGG	-	chr1.3:31221962-31221981	MS.gene060702:intron	45.0%
!	CAGATGCTGTCTTCTTTTGC+TGG	+	chr1.3:31222444-31222463	None:intergenic	45.0%
!	GCATATACTCTGGTTCGCTA+TGG	+	chr1.3:31222306-31222325	None:intergenic	45.0%
!!!	TGAAATGGGCATGCTGGTTT+TGG	+	chr1.3:31221888-31221907	None:intergenic	45.0%
	ATCCCCATCAAGCAACCAAC+AGG	-	chr1.3:31221836-31221855	MS.gene060702:CDS	50.0%
	CCAGCATGCCCATTTCAATG+GGG	-	chr1.3:31221891-31221910	MS.gene060702:intron	50.0%
	CCATTTCAATGGGGTGGCAT+CGG	-	chr1.3:31221900-31221919	MS.gene060702:intron	50.0%
	CGATGCCACCCCATTGAAAT+GGG	+	chr1.3:31221902-31221921	None:intergenic	50.0%
	GCCAACAACATTGCCATTGG+TGG	-	chr1.3:31221958-31221977	MS.gene060702:intron	50.0%
	GGAGGGGATGAATCAGTTTC+AGG	-	chr1.3:31221996-31222015	MS.gene060702:intron	50.0%
	TAGTTGGAGAGGAACCCTGT+TGG	+	chr1.3:31221854-31221873	None:intergenic	50.0%
	TCAACTGGCGTGAAGAGGAT+GGG	-	chr1.3:31222268-31222287	MS.gene060702:intron	50.0%
	TCCCCATCAAGCAACCAACA+GGG	-	chr1.3:31221837-31221856	MS.gene060702:CDS	50.0%
	TTCAACTGGCGTGAAGAGGA+TGG	-	chr1.3:31222267-31222286	MS.gene060702:intron	50.0%
!	AACTGATTCATCCCCTCCCA+TGG	+	chr1.3:31221994-31222013	None:intergenic	50.0%
!	ACCCTGTTGGTTGCTTGATG+GGG	+	chr1.3:31221841-31221860	None:intergenic	50.0%
!	ACTGATTCATCCCCTCCCAT+GGG	+	chr1.3:31221993-31222012	None:intergenic	50.0%
!	ATTGCCATTGGTGGTAGGTG+TGG	-	chr1.3:31221967-31221986	MS.gene060702:intron	50.0%
!	GAACCCTGTTGGTTGCTTGA+TGG	+	chr1.3:31221843-31221862	None:intergenic	50.0%
	CCCCATTGAAATGGGCATGC+TGG	+	chr1.3:31221894-31221913	None:intergenic	55.0%
	CCGATGCCACCCCATTGAAA+TGG	+	chr1.3:31221903-31221922	None:intergenic	55.0%
	GCATGCCCATTTCAATGGGG+TGG	-	chr1.3:31221894-31221913	MS.gene060702:intron	55.0%
!!!	TCGCTGACTTTTGCCCTTCC+AGG	+	chr1.3:31221662-31221681	None:intergenic	55.0%
	AAGAGGATGGGAGGCGGACA+TGG	-	chr1.3:31222280-31222299	MS.gene060702:intron	60.0%
	ACTGGCGTGAAGAGGATGGG+AGG	-	chr1.3:31222271-31222290	MS.gene060702:intron	60.0%
	TGGGCCACACCTACCACCAA+TGG	+	chr1.3:31221974-31221993	None:intergenic	60.0%
	TGGTGGTAGGTGTGGCCCAT+GGG	-	chr1.3:31221975-31221994	MS.gene060702:intron	60.0%
!	TTGGTGGTAGGTGTGGCCCA+TGG	-	chr1.3:31221974-31221993	MS.gene060702:intron	60.0%
!!	TTCAATGGGGTGGCATCGGC+TGG	-	chr1.3:31221904-31221923	MS.gene060702:intron	60.0%
	GGCGTGAAGAGGATGGGAGG+CGG	-	chr1.3:31222274-31222293	MS.gene060702:intron	65.0%
	GGTAGGTGTGGCCCATGGGA+GGG	-	chr1.3:31221979-31221998	MS.gene060702:intron	65.0%
	GTAGGTGTGGCCCATGGGAG+GGG	-	chr1.3:31221980-31221999	MS.gene060702:intron	65.0%
	TGGTAGGTGTGGCCCATGGG+AGG	-	chr1.3:31221978-31221997	MS.gene060702:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.3	gene	31221640	31222468	31221640	ID=MS.gene060702
chr1.3	mRNA	31221640	31222468	31221640	ID=MS.gene060702.t1;Parent=MS.gene060702
chr1.3	exon	31222427	31222468	31222427	ID=MS.gene060702.t1.exon1;Parent=MS.gene060702.t1
chr1.3	CDS	31222427	31222468	31222427	ID=cds.MS.gene060702.t1;Parent=MS.gene060702.t1
chr1.3	exon	31222129	31222276	31222129	ID=MS.gene060702.t1.exon2;Parent=MS.gene060702.t1
chr1.3	CDS	31222129	31222276	31222129	ID=cds.MS.gene060702.t1;Parent=MS.gene060702.t1
chr1.3	exon	31221640	31221857	31221640	ID=MS.gene060702.t1.exon3;Parent=MS.gene060702.t1
chr1.3	CDS	31221640	31221857	31221640	ID=cds.MS.gene060702.t1;Parent=MS.gene060702.t1

Gene Sequence

>MS.gene060702

ATGGGTTCAGAATTAAACTCCTGGAAGGGCAAAAGTCAGCGAGTGAGAAAAAGATGCATCAATGGTGGGGGCTTAGATAAAGCTTAAACTCCATGATTTTTTTTCTTTCAAATAAATTAAACCAAGATGAGAATGTGCGCTAGAGAGTTATATGCTTGGCATCTTCGTTAGTGGCATACTTGTATGTGGTAGTGGAATCCCCATCAAGCAACCAACAGGGTTCCTCTCCAACTACTTTTGAGGCTCCAAAACCAGCATGCCCATTTCAATGGGGTGGCATCGGCTGGAAAACATTCTTTGTTGGCTGTGGGTATGAAAGCCAACAACATTGCCATTGGTGGTAGGTGTGGCCCATGGGAGGGGATGAATCAGTTTCAGGGGTAAATGTTAAGCCAGTTCTTGATTGGGCATACAAAATATTGGCGCGTGAGGTTATGAAAATTACGCATTAATCTAAGCCATCTATTTTAATCCAATGGCTAACTAGAACCTCTTTCATTTTCACGTAAAAAAAGTCATTCTCAATAGATGTCTCTTGTTTAAAGATGACTAGGAAAATTATTGTGTAGTTTTCTACTTTCTAACAAGAAGACATTGTTATGTTGTGACAGTGAGTAGAGGTTTTCATTCAACTGGCGTGAAGAGGATGGGAGGCGGACATGGCCATAGCGAACCAGAGTATATGCATGCATATCACATGTACAACTTGGACAAGATGAAGTATCAGGGTTTGAAAATGTCTCTTGCTGTGTTCACAGCTTTCAGCATTGGTGTTGCAGTTCCTGTGTATGCAGTCATTTTCCAGCAAAAGAAGACAGCATCTGGCTGA

Protein sequence

>MS.gene060702.t1

MGSELNSWKGKSQRWNPHQATNRVPLQLLLRLQNQHAHFNGVASAGKHSLLAVGMKANNIAIGVSRGFHSTGVKRMGGGHGHSEPEYMHAYHMYNLDKMKYQGLKMSLAVFTAFSIGVAVPVYAVIFQQKKTASG