AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71690.t1 MTR_1g107480 99.497 596 3 0 3 598 2 597 0.0 1189
MS.gene71690.t1 MTR_4g005880 78.532 545 117 0 54 598 86 630 0.0 897
MS.gene71690.t1 MTR_3g005970 31.621 253 155 5 119 355 117 367 4.00e-29 119
MS.gene71690.t1 MTR_4g013100 28.235 255 174 4 119 372 68 314 1.75e-28 116
MS.gene71690.t1 MTR_4g013090 28.794 257 168 5 120 372 68 313 4.09e-28 115
MS.gene71690.t1 MTR_1g112510 33.910 289 161 8 97 360 63 346 1.32e-27 115
MS.gene71690.t1 MTR_4g012960 26.772 254 176 4 119 372 67 310 6.89e-26 108
MS.gene71690.t1 MTR_6g007170 30.924 249 162 4 120 361 122 367 1.71e-23 103
MS.gene71690.t1 MTR_4g013135 29.297 256 170 6 119 372 67 313 4.75e-21 94.7
MS.gene71690.t1 MTR_8g033390 28.788 264 171 5 120 379 76 326 8.33e-21 94.4
MS.gene71690.t1 MTR_2g101840 28.462 260 168 7 119 372 67 314 1.33e-19 90.5
MS.gene71690.t1 MTR_6g007175 28.629 248 150 5 120 361 91 317 3.37e-18 86.7
MS.gene71690.t1 MTR_8g033410 25.197 254 177 5 120 367 79 325 4.44e-17 83.2
MS.gene71690.t1 MTR_8g033400 26.482 253 173 6 99 346 67 311 4.48e-17 83.2
MS.gene71690.t1 MTR_7g075830 29.707 239 144 8 120 341 57 288 7.21e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71690.t1 AT4G34200 83.219 584 94 2 19 598 20 603 0.0 981
MS.gene71690.t1 AT3G19480 82.155 566 99 1 35 598 23 588 0.0 942
MS.gene71690.t1 AT1G17745 78.269 543 118 0 56 598 82 624 0.0 885
MS.gene71690.t1 AT1G17745 74.211 570 120 2 56 598 82 651 0.0 864
MS.gene71690.t1 AT1G72190 29.181 281 183 5 76 347 77 350 1.18e-27 115
MS.gene71690.t1 AT5G14780 31.667 240 160 3 126 361 112 351 5.29e-27 113
MS.gene71690.t1 AT5G14780 31.667 240 160 3 126 361 100 339 7.95e-27 112
MS.gene71690.t1 AT1G79870 28.627 255 171 6 120 372 68 313 1.04e-26 111
MS.gene71690.t1 AT5G14780 31.667 240 160 3 126 361 126 365 1.22e-26 112
MS.gene71690.t1 AT1G68010 32.753 287 167 7 97 360 63 346 4.40e-25 108
MS.gene71690.t1 AT1G68010 32.986 288 166 8 97 360 63 347 1.32e-23 103
MS.gene71690.t1 AT1G12550 28.631 241 165 4 120 358 75 310 1.46e-23 102
MS.gene71690.t1 AT1G68010 32.482 274 159 7 97 347 63 333 1.53e-23 103
MS.gene71690.t1 AT2G45630 28.125 256 173 6 120 372 91 338 3.83e-22 98.6
MS.gene71690.t1 AT1G79870 27.559 254 156 6 120 372 68 294 2.58e-21 95.1

Find 183 sgRNAs with CRISPR-Local

Find 269 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCATTGAGCATCTTAT+TGG 0.186509 1.1:-77182555 None:intergenic
GGCGGAGGAGAGAGGGAGTT+TGG 0.212385 1.1:-77181289 None:intergenic
CTTGTTAGAGCATTGGATTC+TGG 0.237598 1.1:+77182650 MS.gene71690:CDS
GTGAAGGGAGACGGAGGGTT+TGG 0.252825 1.1:-77181245 None:intergenic
ACACTTGCTGTAATGGGATT+TGG 0.255805 1.1:+77182356 MS.gene71690:CDS
GCTAGTGCCATATCAGATTC+AGG 0.283199 1.1:+77183865 MS.gene71690:CDS
CATAACCAACTTGCTGTCTT+TGG 0.290705 1.1:-77182804 None:intergenic
GTTCACGAAAACACTGGATA+TGG 0.294301 1.1:-77183710 None:intergenic
TGTTGATCTTGCTGAGAAAC+TGG 0.306465 1.1:+77183552 MS.gene71690:CDS
TGAAGGGAGACGGAGGGTTT+GGG 0.332772 1.1:-77181244 None:intergenic
CGGGAAGTGTTTGAATCTTC+CGG 0.333223 1.1:+77181546 MS.gene71690:CDS
AAGGTAGCATTATACTTTGC+AGG 0.338794 1.1:+77183971 MS.gene71690:CDS
CACTTGCTGTAATGGGATTT+GGG 0.344965 1.1:+77182357 MS.gene71690:CDS
GGAGTTTGGAGGAGAGAGAA+AGG 0.350829 1.1:-77181275 None:intergenic
GCTGATCGTGCTCATGCTAT+TGG 0.358730 1.1:+77182455 MS.gene71690:CDS
GAGGAGAGAGTTATTCTTGA+TGG 0.369656 1.1:+77183781 MS.gene71690:CDS
TCTAACTCCTTTCTTCATCT+TGG 0.371423 1.1:-77182585 None:intergenic
GACTTCCCCTGAATCTGATA+TGG 0.373617 1.1:-77183872 None:intergenic
GGGAAGACACTTGCTGTAAT+GGG 0.381131 1.1:+77182350 MS.gene71690:CDS
ATCTTCCGGTGGAAGACTTA+AGG 0.382285 1.1:+77181560 MS.gene71690:CDS
ACATGGTCAATACAGGGAAA+TGG 0.390332 1.1:+77182294 MS.gene71690:intron
GAAGACGACGAGGGAACGGC+GGG 0.395159 1.1:-77181340 None:intergenic
AGCATCACAGAGAGAGATCT+TGG 0.396721 1.1:-77181493 None:intergenic
GCGGAGAGAGACGGAGAAGG+CGG 0.399759 1.1:-77181307 None:intergenic
CTACGTTAGCAATCTGGACT+TGG 0.407017 1.1:-77183831 None:intergenic
GAGATTCTACGTTAGCAATC+TGG 0.410727 1.1:-77183837 None:intergenic
CCCACCTTTCCAATCATACC+TGG 0.415387 1.1:-77184006 None:intergenic
ATCTTGGTGCAAAGCTCCTC+AGG 0.418039 1.1:-77181477 None:intergenic
TGGGAAGACACTTGCTGTAA+TGG 0.425768 1.1:+77182349 MS.gene71690:CDS
GGAAAGGTGGGAAGCATCTT+GGG 0.427465 1.1:+77184018 MS.gene71690:CDS
TATGTTGGAGTTTCCCTAGT+TGG 0.429161 1.1:+77182329 MS.gene71690:CDS
GTAGATCAACCAGGTATGAT+TGG 0.432608 1.1:+77183997 MS.gene71690:CDS
CAGCAAGTGTCTTCCCAACT+AGG 0.432947 1.1:-77182343 None:intergenic
GGGAAGATGGTGAAGGGAGA+CGG 0.433199 1.1:-77181254 None:intergenic
AAATAGCAGAAGCTGTCGTT+GGG 0.435352 1.1:+77182990 MS.gene71690:CDS
CACGGGATCGCGCTCTTAGC+TGG 0.436535 1.1:+77181693 MS.gene71690:CDS
TGGAAAGGTGGGAAGCATCT+TGG 0.437963 1.1:+77184017 MS.gene71690:CDS
CATGGTCAATACAGGGAAAT+GGG 0.442636 1.1:+77182295 MS.gene71690:intron
AAACACTTCCCGTGAGACTT+TGG 0.443545 1.1:-77181535 None:intergenic
GAGGAGAGAGAAAGGGAAGA+TGG 0.443990 1.1:-77181267 None:intergenic
CTTAAGGTTGTTGGTAGAGC+TGG 0.448434 1.1:+77181576 MS.gene71690:CDS
GGAAGTAGCGTTAGCGGCGG+CGG 0.448739 1.1:-77181223 None:intergenic
CGCTACTGAACATGGTTGCT+TGG 0.449102 1.1:+77181629 MS.gene71690:CDS
AGACGAGTGTCAAGATCATC+CGG 0.450132 1.1:-77183652 None:intergenic
GGGTAGGTTGGCTGTCCAAC+TGG 0.450313 1.1:+77183573 MS.gene71690:CDS
ATGTTGGAGTTTCCCTAGTT+GGG 0.453564 1.1:+77182330 MS.gene71690:CDS
AACCAACTTGCTGTCTTTGG+TGG 0.455394 1.1:-77182801 None:intergenic
GCTGAAAAGCTCGGCGAAGC+TGG 0.458612 1.1:+77181402 MS.gene71690:CDS
ATGAATTCAAGTGGATTCTC+AGG 0.462448 1.1:-77183808 None:intergenic
AAAGAATCTTTGCAAAGGAT+TGG 0.466060 1.1:+77184135 MS.gene71690:CDS
AAGCAGGCTGTGATGGCAAT+TGG 0.470416 1.1:+77184093 MS.gene71690:CDS
TTACGCTTCCGCTAGGGCCC+CGG 0.470607 1.1:+77183633 MS.gene71690:CDS
GCACGATCAGCAGGAGCATA+AGG 0.471790 1.1:-77182443 None:intergenic
GTAATGGGATTTGGGAAGGT+TGG 0.474064 1.1:+77182365 MS.gene71690:CDS
GGATGCACTTGTTAGAGCAT+TGG 0.476077 1.1:+77182643 MS.gene71690:CDS
CTGTCGTTGGGGCTTTGAAA+GGG 0.476987 1.1:+77183002 MS.gene71690:CDS
GGATTCTGGAATTGTAGCTC+AGG 0.477094 1.1:+77182664 MS.gene71690:CDS
GGAGGAGAGAGGGAGTTTGG+AGG 0.479184 1.1:-77181286 None:intergenic
GAGAGAGACGGAGAAGGCGG+AGG 0.480445 1.1:-77181304 None:intergenic
ACATTTAATCTTACAACTTG+AGG 0.482522 1.1:-77184188 None:intergenic
TTGAGCATCTTATTGGTAGC+AGG 0.483290 1.1:-77182548 None:intergenic
AAGATCCAACCTTTGTAAGA+TGG 0.485383 1.1:-77183927 None:intergenic
GTAACTTACCTGAGCTTCCA+TGG 0.486993 1.1:-77182867 None:intergenic
TTCTCAGCAAGATCAACAAA+TGG 0.487878 1.1:-77183547 None:intergenic
TGCTAAGGGGCTTGGTATGA+AGG 0.488921 1.1:+77182406 MS.gene71690:CDS
GGTGGAAGACTTAAGGTTGT+TGG 0.489343 1.1:+77181567 MS.gene71690:CDS
AGATCCAACCTTTGTAAGAT+GGG 0.489776 1.1:-77183926 None:intergenic
TGGGAGAGAAGTAAGTATGT+TGG 0.490032 1.1:+77182314 MS.gene71690:CDS
GCTAGGCGTGCTAAGGGGCT+TGG 0.491466 1.1:+77182398 MS.gene71690:CDS
GGGTTTAGCGTCGAGGGAAG+AGG 0.493537 1.1:-77181367 None:intergenic
AAAACAAATTCTTCAACAGC+AGG 0.493626 1.1:-77184165 None:intergenic
TTATTGGTAGCAGGCGTAAG+AGG 0.493736 1.1:-77182539 None:intergenic
CGAAGACGACGAGGGAACGG+CGG 0.494219 1.1:-77181341 None:intergenic
CGGAGAAGGCGGAGGAGAGA+GGG 0.496667 1.1:-77181296 None:intergenic
GCCATCACAGCCTGCTTGCG+TGG 0.497834 1.1:-77184087 None:intergenic
ATTTGGGAAGGTTGGAACTG+AGG 0.497988 1.1:+77182373 MS.gene71690:CDS
AGACGAAGACGACGAGGGAA+CGG 0.498132 1.1:-77181344 None:intergenic
TGCCAGTACCATGGAAGCTC+AGG 0.500424 1.1:+77182859 MS.gene71690:CDS
GGTTTGGGAAGTAGCGTTAG+CGG 0.502137 1.1:-77181229 None:intergenic
GAAATAGCAGAAGCTGTCGT+TGG 0.503793 1.1:+77182989 MS.gene71690:CDS
TCCACGCAAGCAGGCTGTGA+TGG 0.504167 1.1:+77184086 MS.gene71690:CDS
AAGATGGTGAAGGGAGACGG+AGG 0.504509 1.1:-77181251 None:intergenic
CATGGCTAGAAATGTTGCTC+AGG 0.505750 1.1:+77181716 MS.gene71690:CDS
TTCACGAAAACACTGGATAT+GGG 0.506220 1.1:-77183709 None:intergenic
GTTACTGCAACACCTCATCT+TGG 0.506235 1.1:+77182836 MS.gene71690:CDS
TTCAGGGGAAGTCACGGTGG+AGG 0.507182 1.1:+77183882 MS.gene71690:CDS
TGAGGTTGCTAGGCGTGCTA+AGG 0.507332 1.1:+77182391 MS.gene71690:CDS
TACCTGAGCTTCCATGGTAC+TGG 0.508674 1.1:-77182861 None:intergenic
TTGGCTGTCCAACTGGTAGC+AGG 0.509470 1.1:+77183580 MS.gene71690:CDS
GAGTTTGGAGGAGAGAGAAA+GGG 0.509782 1.1:-77181274 None:intergenic
TGGTATTGATAACGTGGATC+TGG 0.510283 1.1:+77181602 MS.gene71690:CDS
AGAGAAAGGGAAGATGGTGA+AGG 0.510419 1.1:-77181261 None:intergenic
GCTGTCGTTGGGGCTTTGAA+AGG 0.514440 1.1:+77183001 MS.gene71690:CDS
AACTTGCTGTCTTTGGTGGG+TGG 0.516646 1.1:-77182797 None:intergenic
TGCTGAGAAACTGGGTAGGT+TGG 0.518778 1.1:+77183561 MS.gene71690:CDS
CTAGTGCCATATCAGATTCA+GGG 0.520803 1.1:+77183866 MS.gene71690:CDS
GAGGTTGCTAGGCGTGCTAA+GGG 0.523235 1.1:+77182392 MS.gene71690:CDS
GAGAAAGGGAAGATGGTGAA+GGG 0.525178 1.1:-77181260 None:intergenic
AGACGACGAGGGAACGGCGG+GGG 0.527589 1.1:-77181338 None:intergenic
CTCCTCAGGAGTGAGATTGT+AGG 0.528475 1.1:-77181463 None:intergenic
ACCAGGTATGATTGGAAAGG+TGG 0.534240 1.1:+77184005 MS.gene71690:CDS
AAGGATTGCTCCACGCAAGC+AGG 0.534675 1.1:+77184077 MS.gene71690:CDS
CGCGATCCCGTGTTCAGCGG+CGG 0.534842 1.1:-77181682 None:intergenic
ATAGCATGAGCACGATCAGC+AGG 0.535627 1.1:-77182452 None:intergenic
CTGTTGCCGCCGCTGAACAC+GGG 0.536140 1.1:+77181676 MS.gene71690:CDS
ACGGAGAAGGCGGAGGAGAG+AGG 0.539989 1.1:-77181297 None:intergenic
CTGGCCGCCGCTACTGAACA+TGG 0.544785 1.1:+77181621 MS.gene71690:CDS
CGCTTCCTCCTGCTACCAGT+TGG 0.547036 1.1:-77183588 None:intergenic
AGGTTGGAACTGAGGTTGCT+AGG 0.547137 1.1:+77182381 MS.gene71690:CDS
ACCAACTTGCTGTCTTTGGT+GGG 0.548749 1.1:-77182800 None:intergenic
GGGGCGGAGAGAGACGGAGA+AGG 0.551469 1.1:-77181310 None:intergenic
ACTGTTGCCGCCGCTGAACA+CGG 0.551728 1.1:+77181675 MS.gene71690:CDS
TACTGCAGTCAATGCACCAA+TGG 0.553293 1.1:+77183036 MS.gene71690:CDS
CACGGTGGAGGGTCGTGTGA+AGG 0.558987 1.1:+77183894 MS.gene71690:CDS
GCTGATGCTTCTATCAAAGC+TGG 0.560979 1.1:+77181738 MS.gene71690:CDS
TGCTGTAATGGGATTTGGGA+AGG 0.561363 1.1:+77182361 MS.gene71690:CDS
CTTCGTGCTATGATAACAAA+GGG 0.568014 1.1:+77183676 MS.gene71690:CDS
GACGGTGGGTTTAGCGTCGA+GGG 0.568041 1.1:-77181373 None:intergenic
GCGGCAACAGTGTTAGCAGT+GGG 0.570598 1.1:-77181663 None:intergenic
CTTTGCAAAGATTCTTTGCG+TGG 0.570600 1.1:-77184129 None:intergenic
AAGTGACTTACGCTTCCGCT+AGG 0.571734 1.1:+77183626 MS.gene71690:CDS
GAAGTTGATGTGAGTTTGGA+AGG 0.575576 1.1:+77183952 MS.gene71690:CDS
AATGTCAGCTTCATGAGTGT+TGG 0.576599 1.1:+77184054 MS.gene71690:CDS
TGTCGTTGGGGCTTTGAAAG+GGG 0.577535 1.1:+77183003 MS.gene71690:CDS
AGCAAGTGTCTTCCCAACTA+GGG 0.578467 1.1:-77182342 None:intergenic
ATCAGATTCAGGGGAAGTCA+CGG 0.582822 1.1:+77183876 MS.gene71690:CDS
CAACTGGTAGCAGGAGGAAG+CGG 0.583181 1.1:+77183589 MS.gene71690:CDS
CCAGGTATGATTGGAAAGGT+GGG 0.583244 1.1:+77184006 MS.gene71690:CDS
GTGGAGGGTCGTGTGAAGGA+TGG 0.585025 1.1:+77183898 MS.gene71690:CDS
CAGTGGTACCAAAGTCTCAC+GGG 0.587385 1.1:+77181527 MS.gene71690:CDS
AGCACCTCTGAGGAAACCAT+TGG 0.589074 1.1:-77183052 None:intergenic
TCAGGGGAAGTCACGGTGGA+GGG 0.590958 1.1:+77183883 MS.gene71690:CDS
AGATGGTGAAGGGAGACGGA+GGG 0.591266 1.1:-77181250 None:intergenic
GACTTCACTGCTAAACAAAG+AGG 0.591938 1.1:+77183745 MS.gene71690:CDS
TGGACTTGGATGAATTCAAG+TGG 0.592769 1.1:-77183817 None:intergenic
TCTTCGTGCTATGATAACAA+AGG 0.593071 1.1:+77183675 MS.gene71690:CDS
GATCCAACCTTTGTAAGATG+GGG 0.598278 1.1:-77183925 None:intergenic
GTTGTTGGTAGAGCTGGTGT+TGG 0.598796 1.1:+77181582 MS.gene71690:CDS
TCAGCTTCATGAGTGTTGGA+AGG 0.600265 1.1:+77184058 MS.gene71690:CDS
AAGAGGAGACGAAGACGACG+AGG 0.601153 1.1:-77181350 None:intergenic
AGTGACTTACGCTTCCGCTA+GGG 0.601349 1.1:+77183627 MS.gene71690:CDS
GAGCGCGATCCCGTGTTCAG+CGG 0.601676 1.1:-77181685 None:intergenic
GATCGCGCTCTTAGCTGGCA+TGG 0.602254 1.1:+77181698 MS.gene71690:CDS
GACGAGTGTCAAGATCATCC+GGG 0.603704 1.1:-77183651 None:intergenic
CACGCAAAGAATCTTTGCAA+AGG 0.603720 1.1:+77184130 MS.gene71690:CDS
AACAACCTTAAGTCTTCCAC+CGG 0.603726 1.1:-77181565 None:intergenic
ATTGTTAATGTTGCTCGTGG+TGG 0.608712 1.1:+77182608 MS.gene71690:CDS
TCATCTTGGTGCCAGTACCA+TGG 0.610967 1.1:+77182850 MS.gene71690:CDS
TGCACCAATGGTTTCCTCAG+AGG 0.611627 1.1:+77183048 MS.gene71690:CDS
GCAACCATGTTCAGTAGCGG+CGG 0.612837 1.1:-77181625 None:intergenic
GGACGGTGGGTTTAGCGTCG+AGG 0.613960 1.1:-77181374 None:intergenic
ATGGTACTGGCACCAAGATG+AGG 0.614100 1.1:-77182848 None:intergenic
GTCCTCGTCGCTGAAAAGCT+CGG 0.619802 1.1:+77181393 MS.gene71690:CDS
TTGGGAAGTAGCGTTAGCGG+CGG 0.621158 1.1:-77181226 None:intergenic
AACTAAGTTCACGAAAACAC+TGG 0.623332 1.1:-77183716 None:intergenic
GCAGTGGTACCAAAGTCTCA+CGG 0.628266 1.1:+77181526 MS.gene71690:CDS
AGGTTGCTAGGCGTGCTAAG+GGG 0.630349 1.1:+77182393 MS.gene71690:CDS
TCAACCAGGTATGATTGGAA+AGG 0.630443 1.1:+77184002 MS.gene71690:CDS
AAGATCATCCGGGGCCCTAG+CGG 0.632382 1.1:-77183641 None:intergenic
GTTGATCTTGCTGAGAAACT+GGG 0.632655 1.1:+77183553 MS.gene71690:CDS
GGCGGCAACAGTGTTAGCAG+TGG 0.634521 1.1:-77181664 None:intergenic
AGAATTGTTAATGTTGCTCG+TGG 0.642633 1.1:+77182605 MS.gene71690:CDS
AGAGGAGACGAAGACGACGA+GGG 0.647210 1.1:-77181349 None:intergenic
ACTTCACTGCTAAACAAAGA+GGG 0.657467 1.1:+77183746 MS.gene71690:CDS
ACCCACCAAAGACAGCAAGT+TGG 0.658654 1.1:+77182799 MS.gene71690:CDS
ATCCAACCTTTGTAAGATGG+GGG 0.663549 1.1:-77183924 None:intergenic
TAGTGCCATATCAGATTCAG+GGG 0.665071 1.1:+77183867 MS.gene71690:CDS
GAAGTGTTTGAATCTTCCGG+TGG 0.667734 1.1:+77181549 MS.gene71690:CDS
AAGAGGGCTAAGAATTACTG+AGG 0.668513 1.1:+77183762 MS.gene71690:CDS
TGCAGGCAAGTAGATCAACC+AGG 0.669453 1.1:+77183988 MS.gene71690:CDS
CTCCTACAATCTCACTCCTG+AGG 0.670177 1.1:+77181461 MS.gene71690:CDS
CAAGCAACCATGTTCAGTAG+CGG 0.672617 1.1:-77181628 None:intergenic
CAAAGAGATGAAATCAGCGG+TGG 0.673605 1.1:-77182510 None:intergenic
GCTGTCCAACTGGTAGCAGG+AGG 0.676150 1.1:+77183583 MS.gene71690:CDS
AAGACGACGAGGGAACGGCG+GGG 0.677271 1.1:-77181339 None:intergenic
GATGCTCTCATCGTTCGCAG+TGG 0.681979 1.1:+77181510 MS.gene71690:CDS
ACGAGTGTCAAGATCATCCG+GGG 0.682389 1.1:-77183650 None:intergenic
AATAGCAGAAGCTGTCGTTG+GGG 0.700433 1.1:+77182991 MS.gene71690:CDS
GTGCAAAGAGATGAAATCAG+CGG 0.712158 1.1:-77182513 None:intergenic
AGATTCAGGGGAAGTCACGG+TGG 0.714467 1.1:+77183879 MS.gene71690:CDS
ATCTTGCTGAGAAACTGGGT+AGG 0.734226 1.1:+77183557 MS.gene71690:CDS
TGGTGTTGGTATTGATAACG+TGG 0.740226 1.1:+77181596 MS.gene71690:CDS
TCGTGGTGGAGTCATTGACG+AGG 0.747608 1.1:+77182622 MS.gene71690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAAATATAACAAACA+AGG - chr1.1:77181801-77181820 None:intergenic 10.0%
!!! TATTTTTATCATGAAATAAA+AGG - chr1.1:77183101-77183120 None:intergenic 10.0%
!! ATTTGAGAAATTTAAATACA+TGG + chr1.1:77183338-77183357 MS.gene71690:intron 15.0%
!! TAATTTAAGTAAACTAAAAG+TGG - chr1.1:77182704-77182723 None:intergenic 15.0%
!!! TTTTTTAGTGTTAGTTATTT+GGG + chr1.1:77181846-77181865 MS.gene71690:intron 15.0%
!! ATACAAAATGATTTATGGAT+TGG + chr1.1:77183435-77183454 MS.gene71690:intron 20.0%
!! TCCTAATACAAAATGATTTA+TGG + chr1.1:77183430-77183449 MS.gene71690:intron 20.0%
!! TGAGATCTAATGATATATAT+GGG + chr1.1:77182021-77182040 MS.gene71690:intron 20.0%
!! TTGAGATCTAATGATATATA+TGG + chr1.1:77182020-77182039 MS.gene71690:intron 20.0%
!! TTTGAGAAAATGACATTATT+CGG - chr1.1:77182197-77182216 None:intergenic 20.0%
!!! CAAAGAATTTAGAATGATTT+TGG - chr1.1:77183185-77183204 None:intergenic 20.0%
!!! GTTTTTTAGTGTTAGTTATT+TGG + chr1.1:77181845-77181864 MS.gene71690:intron 20.0%
!!! TCATATATTGAAAACGATTT+TGG + chr1.1:77183224-77183243 MS.gene71690:intron 20.0%
!!! TCCATAAATCATTTTGTATT+AGG - chr1.1:77183434-77183453 None:intergenic 20.0%
!!! TCGTTTTCAATATATGAATA+TGG - chr1.1:77183221-77183240 None:intergenic 20.0%
!!! TTTATTCTTTTTAGTTGACT+AGG + chr1.1:77181873-77181892 MS.gene71690:intron 20.0%
! ATATTGCTTGGATATAGATA+AGG - chr1.1:77183157-77183176 None:intergenic 25.0%
! ATTAAATACTACTCAAGTGA+AGG + chr1.1:77183305-77183324 MS.gene71690:intron 25.0%
! GAGATCTAATGATATATATG+GGG + chr1.1:77182022-77182041 MS.gene71690:intron 25.0%
! TTATCTATATCCAAGCAATA+TGG + chr1.1:77183156-77183175 MS.gene71690:intron 25.0%
!! TAAAATTTTCTGTGTAAAGG+AGG + chr1.1:77181907-77181926 MS.gene71690:intron 25.0%
!! TAATGAGTTTTTATTGCTCT+CGG + chr1.1:77183365-77183384 MS.gene71690:intron 25.0%
!! TGGTAAAATTTTCTGTGTAA+AGG + chr1.1:77181904-77181923 MS.gene71690:intron 25.0%
!!! AAAACGATTTTGGAACAAAA+TGG + chr1.1:77183234-77183253 MS.gene71690:intron 25.0%
!!! AGTATTTAATTTGAACCAGT+TGG - chr1.1:77183295-77183314 None:intergenic 25.0%
!!! ATTGAATTAGTGTTGATACA+TGG + chr1.1:77182277-77182296 MS.gene71690:intron 25.0%
AAAACAAATTCTTCAACAGC+AGG - chr1.1:77184168-77184187 None:intergenic 30.0%
AAACACGAAACAAAATCAAC+AGG - chr1.1:77181829-77181848 None:intergenic 30.0%
AAAGAATCTTTGCAAAGGAT+TGG + chr1.1:77184135-77184154 MS.gene71690:CDS 30.0%
AAGCTATAACTCATAGTCAT+AGG - chr1.1:77182904-77182923 None:intergenic 30.0%
TTTCAAAGGTTATTAGACAC+TGG - chr1.1:77182943-77182962 None:intergenic 30.0%
! ATAGTTTGTGTCTTTGTTTC+AGG + chr1.1:77182748-77182767 MS.gene71690:intron 30.0%
!! AATGATTTATGGATTGGAGT+TGG + chr1.1:77183441-77183460 MS.gene71690:intron 30.0%
!! ATTGGAGTTGGTGATAAATT+TGG + chr1.1:77183453-77183472 MS.gene71690:intron 30.0%
!! ATTTTGGAAACCATATTGCT+TGG - chr1.1:77183169-77183188 None:intergenic 30.0%
!!! TTTTGAAGTTGATGTGAGTT+TGG + chr1.1:77183948-77183967 MS.gene71690:CDS 30.0%
AACACCCATTACAGATTACA+CGG - chr1.1:77182073-77182092 None:intergenic 35.0%
AACTAAGTTCACGAAAACAC+TGG - chr1.1:77183719-77183738 None:intergenic 35.0%
AAGATCCAACCTTTGTAAGA+TGG - chr1.1:77183930-77183949 None:intergenic 35.0%
AAGGTAGCATTATACTTTGC+AGG + chr1.1:77183971-77183990 MS.gene71690:CDS 35.0%
ACTTCACTGCTAAACAAAGA+GGG + chr1.1:77183746-77183765 MS.gene71690:CDS 35.0%
AGAATTCACCACACACAAAT+TGG - chr1.1:77181953-77181972 None:intergenic 35.0%
AGAATTGTTAATGTTGCTCG+TGG + chr1.1:77182605-77182624 MS.gene71690:CDS 35.0%
AGATCCAACCTTTGTAAGAT+GGG - chr1.1:77183929-77183948 None:intergenic 35.0%
AGTAACAATATCAAGAGGCA+AGG - chr1.1:77183125-77183144 None:intergenic 35.0%
ATAGTCATAGGCAATTGCTT+AGG - chr1.1:77182892-77182911 None:intergenic 35.0%
CTCATCATTGAGCATCTTAT+TGG - chr1.1:77182558-77182577 None:intergenic 35.0%
CTTCGTGCTATGATAACAAA+GGG + chr1.1:77183676-77183695 MS.gene71690:CDS 35.0%
GAAGCAGTAACAATATCAAG+AGG - chr1.1:77183130-77183149 None:intergenic 35.0%
GATAAAGCCAGCTTCAAAAT+TGG - chr1.1:77183401-77183420 None:intergenic 35.0%
GTTGATACATGGTCAATACA+GGG + chr1.1:77182288-77182307 MS.gene71690:intron 35.0%
TCTAACTCCTTTCTTCATCT+TGG - chr1.1:77182588-77182607 None:intergenic 35.0%
TCTTCCGTGTAATCTGTAAT+GGG + chr1.1:77182066-77182085 MS.gene71690:intron 35.0%
TCTTCGTGCTATGATAACAA+AGG + chr1.1:77183675-77183694 MS.gene71690:CDS 35.0%
TGTATGTACCAATTTGTGTG+TGG + chr1.1:77181976-77181995 MS.gene71690:intron 35.0%
TGTTGATACATGGTCAATAC+AGG + chr1.1:77182287-77182306 MS.gene71690:intron 35.0%
TTCACGAAAACACTGGATAT+GGG - chr1.1:77183712-77183731 None:intergenic 35.0%
TTCTCAGCAAGATCAACAAA+TGG - chr1.1:77183550-77183569 None:intergenic 35.0%
TTCTTCCGTGTAATCTGTAA+TGG + chr1.1:77182065-77182084 MS.gene71690:intron 35.0%
TTTGAAAATGATGACCAGGA+AGG + chr1.1:77182956-77182975 MS.gene71690:intron 35.0%
TTTGTCACATATGTCGTTGT+CGG - chr1.1:77182173-77182192 None:intergenic 35.0%
! AACCTTTGAAAATGATGACC+AGG + chr1.1:77182952-77182971 MS.gene71690:intron 35.0%
! ACATTGTCACTTCTGATCAA+AGG + chr1.1:77182123-77182142 MS.gene71690:intron 35.0%
! ACTTTTGCCAAGATGAAGAA+AGG + chr1.1:77182578-77182597 MS.gene71690:CDS 35.0%
! ATGAATTCAAGTGGATTCTC+AGG - chr1.1:77183811-77183830 None:intergenic 35.0%
! TTCCTGGTCATCATTTTCAA+AGG - chr1.1:77182957-77182976 None:intergenic 35.0%
!! TGTAATGGGTGTTAATGTTG+TGG + chr1.1:77182080-77182099 MS.gene71690:intron 35.0%
!!! TATCTCTCCAATTTTGAAGC+TGG + chr1.1:77183391-77183410 MS.gene71690:intron 35.0%
AAATAGCAGAAGCTGTCGTT+GGG + chr1.1:77182990-77183009 MS.gene71690:CDS 40.0%
AACAACCTTAAGTCTTCCAC+CGG - chr1.1:77181568-77181587 None:intergenic 40.0%
AAGAGGGCTAAGAATTACTG+AGG + chr1.1:77183762-77183781 MS.gene71690:CDS 40.0%
AATGTCAGCTTCATGAGTGT+TGG + chr1.1:77184054-77184073 MS.gene71690:CDS 40.0%
ACATGGTCAATACAGGGAAA+TGG + chr1.1:77182294-77182313 MS.gene71690:intron 40.0%
ATCCAACCTTTGTAAGATGG+GGG - chr1.1:77183927-77183946 None:intergenic 40.0%
ATGTTGGAGTTTCCCTAGTT+GGG + chr1.1:77182330-77182349 MS.gene71690:CDS 40.0%
ATTAGACACTGGTGGCAAAA+GGG - chr1.1:77182932-77182951 None:intergenic 40.0%
ATTGTTAATGTTGCTCGTGG+TGG + chr1.1:77182608-77182627 MS.gene71690:CDS 40.0%
CAAAGGTTATTAGACACTGG+TGG - chr1.1:77182940-77182959 None:intergenic 40.0%
CACACACAAATTGGTACATG+AGG - chr1.1:77181944-77181963 None:intergenic 40.0%
CACGCAAAGAATCTTTGCAA+AGG + chr1.1:77184130-77184149 MS.gene71690:CDS 40.0%
CATGGTCAATACAGGGAAAT+GGG + chr1.1:77182295-77182314 MS.gene71690:intron 40.0%
CTAGTGCCATATCAGATTCA+GGG + chr1.1:77183866-77183885 MS.gene71690:CDS 40.0%
CTCATGTACCAATTTGTGTG+TGG + chr1.1:77181942-77181961 MS.gene71690:intron 40.0%
CTTTGCAAAGATTCTTTGCG+TGG - chr1.1:77184132-77184151 None:intergenic 40.0%
GACTTCACTGCTAAACAAAG+AGG + chr1.1:77183745-77183764 MS.gene71690:CDS 40.0%
GAGATTCTACGTTAGCAATC+TGG - chr1.1:77183840-77183859 None:intergenic 40.0%
GAGGAGAGAGTTATTCTTGA+TGG + chr1.1:77183781-77183800 MS.gene71690:CDS 40.0%
GATCCAACCTTTGTAAGATG+GGG - chr1.1:77183928-77183947 None:intergenic 40.0%
GTAGATCAACCAGGTATGAT+TGG + chr1.1:77183997-77184016 MS.gene71690:CDS 40.0%
GTGCAAAGAGATGAAATCAG+CGG - chr1.1:77182516-77182535 None:intergenic 40.0%
GTTCACGAAAACACTGGATA+TGG - chr1.1:77183713-77183732 None:intergenic 40.0%
GTTGATCTTGCTGAGAAACT+GGG + chr1.1:77183553-77183572 MS.gene71690:CDS 40.0%
TAGTGCCATATCAGATTCAG+GGG + chr1.1:77183867-77183886 MS.gene71690:CDS 40.0%
TAGTTGACTAGGTGACGTAA+TGG + chr1.1:77181884-77181903 MS.gene71690:intron 40.0%
TATGTTGGAGTTTCCCTAGT+TGG + chr1.1:77182329-77182348 MS.gene71690:CDS 40.0%
TATTAGACACTGGTGGCAAA+AGG - chr1.1:77182933-77182952 None:intergenic 40.0%
TCAACCAGGTATGATTGGAA+AGG + chr1.1:77184002-77184021 MS.gene71690:CDS 40.0%
TGGACTTGGATGAATTCAAG+TGG - chr1.1:77183820-77183839 None:intergenic 40.0%
TGGGAGAGAAGTAAGTATGT+TGG + chr1.1:77182314-77182333 MS.gene71690:CDS 40.0%
TGTTGATCTTGCTGAGAAAC+TGG + chr1.1:77183552-77183571 MS.gene71690:CDS 40.0%
TTAACACCTGCAAGTCACAA+AGG - chr1.1:77183516-77183535 None:intergenic 40.0%
TTTCAATAGCTACACCTTCC+TGG - chr1.1:77182973-77182992 None:intergenic 40.0%
! GTTTGTGTCTTTGTTTCAGG+CGG + chr1.1:77182751-77182770 MS.gene71690:intron 40.0%
! TGTTGAGCTTGTGAGTTTTG+AGG + chr1.1:77182478-77182497 MS.gene71690:CDS 40.0%
! TTCATTCCTTTGTGACTTGC+AGG + chr1.1:77183507-77183526 MS.gene71690:intron 40.0%
! TTGAGCATCTTATTGGTAGC+AGG - chr1.1:77182551-77182570 None:intergenic 40.0%
! TTGGTGATAAATTTGGCGAC+TGG + chr1.1:77183460-77183479 MS.gene71690:intron 40.0%
!! ACACTTGCTGTAATGGGATT+TGG + chr1.1:77182356-77182375 MS.gene71690:CDS 40.0%
!! CACTTGCTGTAATGGGATTT+GGG + chr1.1:77182357-77182376 MS.gene71690:CDS 40.0%
!! CATAACCAACTTGCTGTCTT+TGG - chr1.1:77182807-77182826 None:intergenic 40.0%
!! CTTGTTAGAGCATTGGATTC+TGG + chr1.1:77182650-77182669 MS.gene71690:CDS 40.0%
!! GAAGTTGATGTGAGTTTGGA+AGG + chr1.1:77183952-77183971 MS.gene71690:CDS 40.0%
!! TGGTATTGATAACGTGGATC+TGG + chr1.1:77181602-77181621 MS.gene71690:CDS 40.0%
!! TGGTGTTGGTATTGATAACG+TGG + chr1.1:77181596-77181615 MS.gene71690:CDS 40.0%
AAACACTTCCCGTGAGACTT+TGG - chr1.1:77181538-77181557 None:intergenic 45.0%
AATAGCAGAAGCTGTCGTTG+GGG + chr1.1:77182991-77183010 MS.gene71690:CDS 45.0%
ACCAGGTATGATTGGAAAGG+TGG + chr1.1:77184005-77184024 MS.gene71690:CDS 45.0%
AGACGAGTGTCAAGATCATC+CGG - chr1.1:77183655-77183674 None:intergenic 45.0%
AGAGAAAGGGAAGATGGTGA+AGG - chr1.1:77181264-77181283 None:intergenic 45.0%
AGCAAGTGTCTTCCCAACTA+GGG - chr1.1:77182345-77182364 None:intergenic 45.0%
AGCATCACAGAGAGAGATCT+TGG - chr1.1:77181496-77181515 None:intergenic 45.0%
ATCAGATTCAGGGGAAGTCA+CGG + chr1.1:77183876-77183895 MS.gene71690:CDS 45.0%
ATCTTCCGGTGGAAGACTTA+AGG + chr1.1:77181560-77181579 MS.gene71690:CDS 45.0%
ATCTTGCTGAGAAACTGGGT+AGG + chr1.1:77183557-77183576 MS.gene71690:CDS 45.0%
ATTTGGGAAGGTTGGAACTG+AGG + chr1.1:77182373-77182392 MS.gene71690:CDS 45.0%
CAAAGAGATGAAATCAGCGG+TGG - chr1.1:77182513-77182532 None:intergenic 45.0%
CAAGCAACCATGTTCAGTAG+CGG - chr1.1:77181631-77181650 None:intergenic 45.0%
CATGGCTAGAAATGTTGCTC+AGG + chr1.1:77181716-77181735 MS.gene71690:CDS 45.0%
CCAGGTATGATTGGAAAGGT+GGG + chr1.1:77184006-77184025 MS.gene71690:CDS 45.0%
CTACGTTAGCAATCTGGACT+TGG - chr1.1:77183834-77183853 None:intergenic 45.0%
GAAATAGCAGAAGCTGTCGT+TGG + chr1.1:77182989-77183008 MS.gene71690:CDS 45.0%
GACTTCCCCTGAATCTGATA+TGG - chr1.1:77183875-77183894 None:intergenic 45.0%
GAGAAAGGGAAGATGGTGAA+GGG - chr1.1:77181263-77181282 None:intergenic 45.0%
GAGTTTGGAGGAGAGAGAAA+GGG - chr1.1:77181277-77181296 None:intergenic 45.0%
GCTAGTGCCATATCAGATTC+AGG + chr1.1:77183865-77183884 MS.gene71690:CDS 45.0%
GCTGATGCTTCTATCAAAGC+TGG + chr1.1:77181738-77181757 MS.gene71690:CDS 45.0%
GGTGGAAGACTTAAGGTTGT+TGG + chr1.1:77181567-77181586 MS.gene71690:CDS 45.0%
GTAACTTACCTGAGCTTCCA+TGG - chr1.1:77182870-77182889 None:intergenic 45.0%
GTTACTGCAACACCTCATCT+TGG + chr1.1:77182836-77182855 MS.gene71690:CDS 45.0%
TACTGCAGTCAATGCACCAA+TGG + chr1.1:77183036-77183055 MS.gene71690:CDS 45.0%
TCAACTGCTATGTGTCCAAC+TGG + chr1.1:77183277-77183296 MS.gene71690:intron 45.0%
! CTTAAGGTTGTTGGTAGAGC+TGG + chr1.1:77181576-77181595 MS.gene71690:CDS 45.0%
! GAAGTGTTTGAATCTTCCGG+TGG + chr1.1:77181549-77181568 MS.gene71690:CDS 45.0%
! GGATGCACTTGTTAGAGCAT+TGG + chr1.1:77182643-77182662 MS.gene71690:CDS 45.0%
! GTAATGGGATTTGGGAAGGT+TGG + chr1.1:77182365-77182384 MS.gene71690:CDS 45.0%
! TGCTGTAATGGGATTTGGGA+AGG + chr1.1:77182361-77182380 MS.gene71690:CDS 45.0%
! TTATTGGTAGCAGGCGTAAG+AGG - chr1.1:77182542-77182561 None:intergenic 45.0%
!! AACCAACTTGCTGTCTTTGG+TGG - chr1.1:77182804-77182823 None:intergenic 45.0%
!! ACCAACTTGCTGTCTTTGGT+GGG - chr1.1:77182803-77182822 None:intergenic 45.0%
!! CGGGAAGTGTTTGAATCTTC+CGG + chr1.1:77181546-77181565 MS.gene71690:CDS 45.0%
!! GGATTCTGGAATTGTAGCTC+AGG + chr1.1:77182664-77182683 MS.gene71690:CDS 45.0%
!! GGGAAGACACTTGCTGTAAT+GGG + chr1.1:77182350-77182369 MS.gene71690:CDS 45.0%
!! TCAGCTTCATGAGTGTTGGA+AGG + chr1.1:77184058-77184077 MS.gene71690:CDS 45.0%
!! TGGGAAGACACTTGCTGTAA+TGG + chr1.1:77182349-77182368 MS.gene71690:CDS 45.0%
!!! TGAGCTTGTGAGTTTTGAGG+AGG + chr1.1:77182481-77182500 MS.gene71690:CDS 45.0%
!! ACTTAAATTAATAATTAATT+GGG + chr1.1:77182714-77182733 MS.gene71690:intron 5.0%
!! TACTTAAATTAATAATTAAT+TGG + chr1.1:77182713-77182732 MS.gene71690:intron 5.0%
AAGCAGGCTGTGATGGCAAT+TGG + chr1.1:77184093-77184112 MS.gene71690:CDS 50.0%
AAGTGACTTACGCTTCCGCT+AGG + chr1.1:77183626-77183645 MS.gene71690:CDS 50.0%
ACCCACCAAAGACAGCAAGT+TGG + chr1.1:77182799-77182818 MS.gene71690:CDS 50.0%
ACGAGTGTCAAGATCATCCG+GGG - chr1.1:77183653-77183672 None:intergenic 50.0%
AGGTTGGAACTGAGGTTGCT+AGG + chr1.1:77182381-77182400 MS.gene71690:CDS 50.0%
AGTGACTTACGCTTCCGCTA+GGG + chr1.1:77183627-77183646 MS.gene71690:CDS 50.0%
ATAGCATGAGCACGATCAGC+AGG - chr1.1:77182455-77182474 None:intergenic 50.0%
CAGCAAGTGTCTTCCCAACT+AGG - chr1.1:77182346-77182365 None:intergenic 50.0%
CAGTGGTACCAAAGTCTCAC+GGG + chr1.1:77181527-77181546 MS.gene71690:CDS 50.0%
CCCACCTTTCCAATCATACC+TGG - chr1.1:77184009-77184028 None:intergenic 50.0%
CGCTACTGAACATGGTTGCT+TGG + chr1.1:77181629-77181648 MS.gene71690:CDS 50.0%
CTCCTACAATCTCACTCCTG+AGG + chr1.1:77181461-77181480 MS.gene71690:CDS 50.0%
CTCCTCAGGAGTGAGATTGT+AGG - chr1.1:77181466-77181485 None:intergenic 50.0%
GACGAGTGTCAAGATCATCC+GGG - chr1.1:77183654-77183673 None:intergenic 50.0%
GAGGAGAGAGAAAGGGAAGA+TGG - chr1.1:77181270-77181289 None:intergenic 50.0%
GCAGTGGTACCAAAGTCTCA+CGG + chr1.1:77181526-77181545 MS.gene71690:CDS 50.0%
GCTGATCGTGCTCATGCTAT+TGG + chr1.1:77182455-77182474 MS.gene71690:CDS 50.0%
GGAGTTTGGAGGAGAGAGAA+AGG - chr1.1:77181278-77181297 None:intergenic 50.0%
GGTTTGGGAAGTAGCGTTAG+CGG - chr1.1:77181232-77181251 None:intergenic 50.0%
GTCCCCCATCTTACAAAGGT+TGG + chr1.1:77183922-77183941 MS.gene71690:CDS 50.0%
TACCTGAGCTTCCATGGTAC+TGG - chr1.1:77182864-77182883 None:intergenic 50.0%
TGCACCAATGGTTTCCTCAG+AGG + chr1.1:77183048-77183067 MS.gene71690:CDS 50.0%
TGCAGGCAAGTAGATCAACC+AGG + chr1.1:77183988-77184007 MS.gene71690:CDS 50.0%
TGCTGAGAAACTGGGTAGGT+TGG + chr1.1:77183561-77183580 MS.gene71690:CDS 50.0%
TGGTGTCCCCCATCTTACAA+AGG + chr1.1:77183918-77183937 MS.gene71690:CDS 50.0%
! AATGGTTTCCTCAGAGGTGC+TGG + chr1.1:77183054-77183073 MS.gene71690:intron 50.0%
! AGCACCTCTGAGGAAACCAT+TGG - chr1.1:77183055-77183074 None:intergenic 50.0%
! ATCTTGGTGCAAAGCTCCTC+AGG - chr1.1:77181480-77181499 None:intergenic 50.0%
! GGCGGCTCTTGATGTTTTCA+CGG + chr1.1:77182769-77182788 MS.gene71690:intron 50.0%
! GGCTCTTGATGTTTTCACGG+TGG + chr1.1:77182772-77182791 MS.gene71690:CDS 50.0%
! GTTGTTGGTAGAGCTGGTGT+TGG + chr1.1:77181582-77181601 MS.gene71690:CDS 50.0%
! TGCTAAGGGGCTTGGTATGA+AGG + chr1.1:77182406-77182425 MS.gene71690:CDS 50.0%
! TTTTGTTCCCAGCACCTCTG+AGG - chr1.1:77183065-77183084 None:intergenic 50.0%
!! AACTTGCTGTCTTTGGTGGG+TGG - chr1.1:77182800-77182819 None:intergenic 50.0%
!! ATGGTACTGGCACCAAGATG+AGG - chr1.1:77182851-77182870 None:intergenic 50.0%
!! ATGGTTTCCTCAGAGGTGCT+GGG + chr1.1:77183055-77183074 MS.gene71690:intron 50.0%
!! CTGTCGTTGGGGCTTTGAAA+GGG + chr1.1:77183002-77183021 MS.gene71690:CDS 50.0%
!! GGAAAGGTGGGAAGCATCTT+GGG + chr1.1:77184018-77184037 MS.gene71690:CDS 50.0%
!! TCATCTTGGTGCCAGTACCA+TGG + chr1.1:77182850-77182869 MS.gene71690:CDS 50.0%
!! TGGAAAGGTGGGAAGCATCT+TGG + chr1.1:77184017-77184036 MS.gene71690:CDS 50.0%
!! TGTCGTTGGGGCTTTGAAAG+GGG + chr1.1:77183003-77183022 MS.gene71690:CDS 50.0%
AAGAGGAGACGAAGACGACG+AGG - chr1.1:77181353-77181372 None:intergenic 55.0%
AAGATGGTGAAGGGAGACGG+AGG - chr1.1:77181254-77181273 None:intergenic 55.0%
AAGGATTGCTCCACGCAAGC+AGG + chr1.1:77184077-77184096 MS.gene71690:CDS 55.0%
AGACGAAGACGACGAGGGAA+CGG - chr1.1:77181347-77181366 None:intergenic 55.0%
AGAGGAGACGAAGACGACGA+GGG - chr1.1:77181352-77181371 None:intergenic 55.0%
AGATGGTGAAGGGAGACGGA+GGG - chr1.1:77181253-77181272 None:intergenic 55.0%
AGATTCAGGGGAAGTCACGG+TGG + chr1.1:77183879-77183898 MS.gene71690:CDS 55.0%
AGGTTGCTAGGCGTGCTAAG+GGG + chr1.1:77182393-77182412 MS.gene71690:CDS 55.0%
CAACTGGTAGCAGGAGGAAG+CGG + chr1.1:77183589-77183608 MS.gene71690:CDS 55.0%
GAGGTTGCTAGGCGTGCTAA+GGG + chr1.1:77182392-77182411 MS.gene71690:CDS 55.0%
GATGCTCTCATCGTTCGCAG+TGG + chr1.1:77181510-77181529 MS.gene71690:CDS 55.0%
GCAACCATGTTCAGTAGCGG+CGG - chr1.1:77181628-77181647 None:intergenic 55.0%
GCGGCAACAGTGTTAGCAGT+GGG - chr1.1:77181666-77181685 None:intergenic 55.0%
GGGAAGATGGTGAAGGGAGA+CGG - chr1.1:77181257-77181276 None:intergenic 55.0%
GTCCTCGTCGCTGAAAAGCT+CGG + chr1.1:77181393-77181412 MS.gene71690:CDS 55.0%
TGAAGGGAGACGGAGGGTTT+GGG - chr1.1:77181247-77181266 None:intergenic 55.0%
TGAGGTTGCTAGGCGTGCTA+AGG + chr1.1:77182391-77182410 MS.gene71690:CDS 55.0%
TGCCAGTACCATGGAAGCTC+AGG + chr1.1:77182859-77182878 MS.gene71690:CDS 55.0%
TTGGCTGTCCAACTGGTAGC+AGG + chr1.1:77183580-77183599 MS.gene71690:CDS 55.0%
TTGGGAAGTAGCGTTAGCGG+CGG - chr1.1:77181229-77181248 None:intergenic 55.0%
! GAGCTTTTCAGCGACGAGGA+CGG - chr1.1:77181394-77181413 None:intergenic 55.0%
! GCACGATCAGCAGGAGCATA+AGG - chr1.1:77182446-77182465 None:intergenic 55.0%
! TCGTGGTGGAGTCATTGACG+AGG + chr1.1:77182622-77182641 MS.gene71690:CDS 55.0%
! TTTTCAGCGACGAGGACGGT+GGG - chr1.1:77181390-77181409 None:intergenic 55.0%
!! GCTGTCGTTGGGGCTTTGAA+AGG + chr1.1:77183001-77183020 MS.gene71690:CDS 55.0%
!! TCGGTGTCAGACACTCACAC+AGG - chr1.1:77182154-77182173 None:intergenic 55.0%
AAGATCATCCGGGGCCCTAG+CGG - chr1.1:77183644-77183663 None:intergenic 60.0%
ACTGTTGCCGCCGCTGAACA+CGG + chr1.1:77181675-77181694 MS.gene71690:CDS 60.0%
CGCTTCCTCCTGCTACCAGT+TGG - chr1.1:77183591-77183610 None:intergenic 60.0%
GATCGCGCTCTTAGCTGGCA+TGG + chr1.1:77181698-77181717 MS.gene71690:CDS 60.0%
GCTGAAAAGCTCGGCGAAGC+TGG + chr1.1:77181402-77181421 MS.gene71690:CDS 60.0%
GCTGTCCAACTGGTAGCAGG+AGG + chr1.1:77183583-77183602 MS.gene71690:CDS 60.0%
GGAGGAGAGAGGGAGTTTGG+AGG - chr1.1:77181289-77181308 None:intergenic 60.0%
GGCGGCAACAGTGTTAGCAG+TGG - chr1.1:77181667-77181686 None:intergenic 60.0%
GTGAAGGGAGACGGAGGGTT+TGG - chr1.1:77181248-77181267 None:intergenic 60.0%
GTGGAGGGTCGTGTGAAGGA+TGG + chr1.1:77183898-77183917 MS.gene71690:CDS 60.0%
TCAGGGGAAGTCACGGTGGA+GGG + chr1.1:77183883-77183902 MS.gene71690:CDS 60.0%
TCCACGCAAGCAGGCTGTGA+TGG + chr1.1:77184086-77184105 MS.gene71690:CDS 60.0%
TTCAGGGGAAGTCACGGTGG+AGG + chr1.1:77183882-77183901 MS.gene71690:CDS 60.0%
! CTTTTCAGCGACGAGGACGG+TGG - chr1.1:77181391-77181410 None:intergenic 60.0%
! GACGGTGGGTTTAGCGTCGA+GGG - chr1.1:77181376-77181395 None:intergenic 60.0%
! GGGTAGGTTGGCTGTCCAAC+TGG + chr1.1:77183573-77183592 MS.gene71690:CDS 60.0%
! GGGTTTAGCGTCGAGGGAAG+AGG - chr1.1:77181370-77181389 None:intergenic 60.0%
AAGACGACGAGGGAACGGCG+GGG - chr1.1:77181342-77181361 None:intergenic 65.0%
ACGGAGAAGGCGGAGGAGAG+AGG - chr1.1:77181300-77181319 None:intergenic 65.0%
CACGGGATCGCGCTCTTAGC+TGG + chr1.1:77181693-77181712 MS.gene71690:CDS 65.0%
CACGGTGGAGGGTCGTGTGA+AGG + chr1.1:77183894-77183913 MS.gene71690:CDS 65.0%
CGAAGACGACGAGGGAACGG+CGG - chr1.1:77181344-77181363 None:intergenic 65.0%
CGGAGAAGGCGGAGGAGAGA+GGG - chr1.1:77181299-77181318 None:intergenic 65.0%
CTGGCCGCCGCTACTGAACA+TGG + chr1.1:77181621-77181640 MS.gene71690:CDS 65.0%
CTGTTGCCGCCGCTGAACAC+GGG + chr1.1:77181676-77181695 MS.gene71690:CDS 65.0%
GAAGACGACGAGGGAACGGC+GGG - chr1.1:77181343-77181362 None:intergenic 65.0%
GAGAGAGACGGAGAAGGCGG+AGG - chr1.1:77181307-77181326 None:intergenic 65.0%
GAGCGCGATCCCGTGTTCAG+CGG - chr1.1:77181688-77181707 None:intergenic 65.0%
GCCATCACAGCCTGCTTGCG+TGG - chr1.1:77184090-77184109 None:intergenic 65.0%
GCGGAGAGAGACGGAGAAGG+CGG - chr1.1:77181310-77181329 None:intergenic 65.0%
GCTAGGCGTGCTAAGGGGCT+TGG + chr1.1:77182398-77182417 MS.gene71690:CDS 65.0%
GGAAGTAGCGTTAGCGGCGG+CGG - chr1.1:77181226-77181245 None:intergenic 65.0%
GGCGGAGGAGAGAGGGAGTT+TGG - chr1.1:77181292-77181311 None:intergenic 65.0%
GTTGTGGGGGCGGAGAGAGA+CGG - chr1.1:77181319-77181338 None:intergenic 65.0%
TTACGCTTCCGCTAGGGCCC+CGG + chr1.1:77183633-77183652 MS.gene71690:CDS 65.0%
! CGCCGAGCTTTTCAGCGACG+AGG - chr1.1:77181398-77181417 None:intergenic 65.0%
! GGACGGTGGGTTTAGCGTCG+AGG - chr1.1:77181377-77181396 None:intergenic 65.0%
AGACGACGAGGGAACGGCGG+GGG - chr1.1:77181341-77181360 None:intergenic 70.0%
AGGGAACGGCGGGGGTTGTG+GGG - chr1.1:77181333-77181352 None:intergenic 70.0%
CGCGATCCCGTGTTCAGCGG+CGG - chr1.1:77181685-77181704 None:intergenic 70.0%
GAGGGAACGGCGGGGGTTGT+GGG - chr1.1:77181334-77181353 None:intergenic 70.0%
GGGGCGGAGAGAGACGGAGA+AGG - chr1.1:77181313-77181332 None:intergenic 70.0%
AACGGCGGGGGTTGTGGGGG+CGG - chr1.1:77181329-77181348 None:intergenic 75.0%
CGAGGGAACGGCGGGGGTTG+TGG - chr1.1:77181335-77181354 None:intergenic 75.0%
GGGAACGGCGGGGGTTGTGG+GGG - chr1.1:77181332-77181351 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 77181219 77184200 77181219 ID=MS.gene71690
chr1.1 mRNA 77181219 77184200 77181219 ID=MS.gene71690.t1;Parent=MS.gene71690
chr1.1 exon 77181219 77181759 77181219 ID=MS.gene71690.t1.exon1;Parent=MS.gene71690.t1
chr1.1 CDS 77181219 77181759 77181219 ID=cds.MS.gene71690.t1;Parent=MS.gene71690.t1
chr1.1 exon 77182309 77182685 77182309 ID=MS.gene71690.t1.exon2;Parent=MS.gene71690.t1
chr1.1 CDS 77182309 77182685 77182309 ID=cds.MS.gene71690.t1;Parent=MS.gene71690.t1
chr1.1 exon 77182770 77182880 77182770 ID=MS.gene71690.t1.exon3;Parent=MS.gene71690.t1
chr1.1 CDS 77182770 77182880 77182770 ID=cds.MS.gene71690.t1;Parent=MS.gene71690.t1
chr1.1 exon 77182974 77183069 77182974 ID=MS.gene71690.t1.exon4;Parent=MS.gene71690.t1
chr1.1 CDS 77182974 77183069 77182974 ID=cds.MS.gene71690.t1;Parent=MS.gene71690.t1
chr1.1 exon 77183529 77184200 77183529 ID=MS.gene71690.t1.exon5;Parent=MS.gene71690.t1
chr1.1 CDS 77183529 77184200 77183529 ID=cds.MS.gene71690.t1;Parent=MS.gene71690.t1
Gene Sequence

>MS.gene71690

ATGGCCGCCGCCGCTAACGCTACTTCCCAAACCCTCCGTCTCCCTTCACCATCTTCCCTTTCTCTCTCCTCCAAACTCCCTCTCTCCTCCGCCTTCTCCGTCTCTCTCCGCCCCCACAACCCCCGCCGTTCCCTCGTCGTCTTCGTCTCCTCTTCCCTCGACGCTAAACCCACCGTCCTCGTCGCTGAAAAGCTCGGCGAAGCTGGTCTCACTCTTCTCAAAGACTTCGCTAACGTCGACTGCTCCTACAATCTCACTCCTGAGGAGCTTTGCACCAAGATCTCTCTCTGTGATGCTCTCATCGTTCGCAGTGGTACCAAAGTCTCACGGGAAGTGTTTGAATCTTCCGGTGGAAGACTTAAGGTTGTTGGTAGAGCTGGTGTTGGTATTGATAACGTGGATCTGGCCGCCGCTACTGAACATGGTTGCTTGGTTGTTAATGCTCCCACTGCTAACACTGTTGCCGCCGCTGAACACGGGATCGCGCTCTTAGCTGGCATGGCTAGAAATGTTGCTCAGGCTGATGCTTCTATCAAAGCTGGTAGAGTTCTTTTTTTCATAGCAGCATTTTATCGAACACCTTGTTTGTTATATTTTTTTTATAGATCCTGTTGATTTTGTTTCGTGTTTTTTAGTGTTAGTTATTTGGGTACTTTTATTCTTTTTAGTTGACTAGGTGACGTAATGGTAAAATTTTCTGTGTAAAGGAGGAAACTTCTTTTCCTCATGTACCAATTTGTGTGTGGTGAATTCTTTTTGTATGTACCAATTTGTGTGTGGTGAATTCTTTTTGTATAAATGTTGAGATCTAATGATATATATGGGGTAAAGTTTTTATTTTTTTTCTTCTTCCGTGTAATCTGTAATGGGTGTTAATGTTGTGGCTTCTGTTATTTGCTTTGCAACATTGTCACTTCTGATCAAAGGCGTGTCCTGTGTGAGTGTCTGACACCGACAACGACATATGTGACAAAACCGAATAATGTCATTTTCTCAAATTATTATCGTTGTCAAAGCGTTTGTGTCTGTGCTGCATAAGTTATTAGTTGATATGATTAATTGAATTAGTGTTGATACATGGTCAATACAGGGAAATGGGAGAGAAGTAAGTATGTTGGAGTTTCCCTAGTTGGGAAGACACTTGCTGTAATGGGATTTGGGAAGGTTGGAACTGAGGTTGCTAGGCGTGCTAAGGGGCTTGGTATGAAGGTTATTGCTCATGATCCTTATGCTCCTGCTGATCGTGCTCATGCTATTGGTGTTGAGCTTGTGAGTTTTGAGGAGGCTATTGCCACCGCTGATTTCATCTCTTTGCACATGCCTCTTACGCCTGCTACCAATAAGATGCTCAATGATGAGACTTTTGCCAAGATGAAGAAAGGAGTTAGAATTGTTAATGTTGCTCGTGGTGGAGTCATTGACGAGGATGCACTTGTTAGAGCATTGGATTCTGGAATTGTAGCTCAGGTTTGAAGCACTGAGCCACTTTTAGTTTACTTAAATTAATAATTAATTGGGTTGAAATACTGATAGTTTGTGTCTTTGTTTCAGGCGGCTCTTGATGTTTTCACGGTGGAACCACCCACCAAAGACAGCAAGTTGGTTATGCATGAGCTAGTTACTGCAACACCTCATCTTGGTGCCAGTACCATGGAAGCTCAGGTAAGTTACCTAAGCAATTGCCTATGACTATGAGTTATAGCTTTGTTTCCCTTTTGCCACCAGTGTCTAATAACCTTTGAAAATGATGACCAGGAAGGTGTAGCTATTGAAATAGCAGAAGCTGTCGTTGGGGCTTTGAAAGGGGAGCTTGCTTCTACTGCAGTCAATGCACCAATGGTTTCCTCAGAGGTGCTGGGAACAAAACTATTGTATTTATCCTTTTATTTCATGATAAAAATAACCTTGCCTCTTGATATTGTTACTGCTTCTCTTCCTTATCTATATCCAAGCAATATGGTTTCCAAAATCATTCTAAATTCTTTGACTTTTTGTGTAACCATATTCATATATTGAAAACGATTTTGGAACAAAATGGTTGTCTTAAATTGTTAAATTTCAACTGCTATGTGTCCAACTGGTTCAAATTAAATACTACTCAAGTGAAGGCAAAAGTTTGATTTGAGAAATTTAAATACATGGATCTTAATGAGTTTTTATTGCTCTCGGCTTTATCTCTCCAATTTTGAAGCTGGCTTTATCTAGAGCTTATCCTAATACAAAATGATTTATGGATTGGAGTTGGTGATAAATTTGGCGACTGGAATGACTCAAAGTTTAACATATGTTTCATTCCTTTGTGACTTGCAGGTGTTAACAGAACTAAAACCATTTGTTGATCTTGCTGAGAAACTGGGTAGGTTGGCTGTCCAACTGGTAGCAGGAGGAAGCGGTGTAAAGACAGTGAAAGTGACTTACGCTTCCGCTAGGGCCCCGGATGATCTTGACACTCGTCTTCTTCGTGCTATGATAACAAAGGGTCTGATTGAGCCCATATCCAGTGTTTTCGTGAACTTAGTTAATGCTGACTTCACTGCTAAACAAAGAGGGCTAAGAATTACTGAGGAGAGAGTTATTCTTGATGGTTCACCTGAGAATCCACTTGAATTCATCCAAGTCCAGATTGCTAACGTAGAATCTCGATTTGCTAGTGCCATATCAGATTCAGGGGAAGTCACGGTGGAGGGTCGTGTGAAGGATGGTGTCCCCCATCTTACAAAGGTTGGATCTTTTGAAGTTGATGTGAGTTTGGAAGGTAGCATTATACTTTGCAGGCAAGTAGATCAACCAGGTATGATTGGAAAGGTGGGAAGCATCTTGGGTGAAGAGAATGTGAATGTCAGCTTCATGAGTGTTGGAAGGATTGCTCCACGCAAGCAGGCTGTGATGGCAATTGGAGTTGATGAGCAACCACGCAAAGAATCTTTGCAAAGGATTGGAGACATTCCTGCTGTTGAAGAATTTGTTTTCCTCAAGTTGTAA
Protein sequence

>MS.gene71690.t1

MAAAANATSQTLRLPSPSSLSLSSKLPLSSAFSVSLRPHNPRRSLVVFVSSSLDAKPTVLVAEKLGEAGLTLLKDFANVDCSYNLTPEELCTKISLCDALIVRSGTKVSREVFESSGGRLKVVGRAGVGIDNVDLAAATEHGCLVVNAPTANTVAAAEHGIALLAGMARNVAQADASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMKVIAHDPYAPADRAHAIGVELVSFEEAIATADFISLHMPLTPATNKMLNDETFAKMKKGVRIVNVARGGVIDEDALVRALDSGIVAQAALDVFTVEPPTKDSKLVMHELVTATPHLGASTMEAQEGVAIEIAEAVVGALKGELASTAVNAPMVSSEVLTELKPFVDLAEKLGRLAVQLVAGGSGVKTVKVTYASARAPDDLDTRLLRAMITKGLIEPISSVFVNLVNADFTAKQRGLRITEERVILDGSPENPLEFIQVQIANVESRFASAISDSGEVTVEGRVKDGVPHLTKVGSFEVDVSLEGSIILCRQVDQPGMIGKVGSILGEENVNVSFMSVGRIAPRKQAVMAIGVDEQPRKESLQRIGDIPAVEEFVFLKL