Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034271.t1 | XP_003604140.1 | 95 | 634 | 22 | 3 | 1 | 628 | 1 | 630 | 0.00E+00 | 1107.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034271.t1 | O04130 | 76.1 | 624 | 136 | 4 | 16 | 628 | 3 | 624 | 3.0e-257 | 889.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034271.t1 | G7JVK0 | 95.0 | 634 | 22 | 3 | 1 | 628 | 1 | 630 | 0.0e+00 | 1107.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene034271 | MS.gene71690 | PPI |
| MS.gene64242 | MS.gene034271 | PPI |
| MS.gene034271 | MS.gene029581 | PPI |
| MS.gene34189 | MS.gene034271 | PPI |
| MS.gene034271 | MS.gene064936 | PPI |
| MS.gene026953 | MS.gene034271 | PPI |
| MS.gene034271 | MS.gene065682 | PPI |
| MS.gene92996 | MS.gene034271 | PPI |
| MS.gene073953 | MS.gene034271 | PPI |
| MS.gene034271 | MS.gene026951 | PPI |
| MS.gene53578 | MS.gene034271 | PPI |
| MS.gene034271 | MS.gene82938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034271.t1 | MTR_4g005880 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| MS.gene034271.t1 | MTR_1g107480 | 77.939 | 553 | 122 | 0 | 76 | 628 | 45 | 597 | 0.0 | 902 |
| MS.gene034271.t1 | MTR_1g112510 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 2.57e-32 | 129 |
| MS.gene034271.t1 | MTR_3g005970 | 31.890 | 254 | 153 | 5 | 149 | 385 | 117 | 367 | 3.13e-30 | 123 |
| MS.gene034271.t1 | MTR_4g013100 | 29.412 | 255 | 171 | 4 | 149 | 402 | 68 | 314 | 6.97e-29 | 117 |
| MS.gene034271.t1 | MTR_4g013090 | 29.183 | 257 | 167 | 5 | 150 | 402 | 68 | 313 | 7.79e-28 | 114 |
| MS.gene034271.t1 | MTR_4g012960 | 27.907 | 258 | 172 | 4 | 149 | 406 | 67 | 310 | 1.14e-26 | 111 |
| MS.gene034271.t1 | MTR_6g007170 | 30.081 | 246 | 168 | 3 | 150 | 391 | 122 | 367 | 6.13e-26 | 110 |
| MS.gene034271.t1 | MTR_8g033390 | 29.811 | 265 | 167 | 6 | 150 | 409 | 76 | 326 | 3.58e-23 | 101 |
| MS.gene034271.t1 | MTR_4g013135 | 31.154 | 260 | 164 | 6 | 149 | 406 | 67 | 313 | 5.59e-22 | 97.4 |
| MS.gene034271.t1 | MTR_2g101840 | 29.885 | 261 | 161 | 7 | 150 | 402 | 68 | 314 | 6.76e-20 | 91.3 |
| MS.gene034271.t1 | MTR_6g007175 | 27.347 | 245 | 157 | 4 | 150 | 391 | 91 | 317 | 1.25e-19 | 90.9 |
| MS.gene034271.t1 | MTR_8g033400 | 28.405 | 257 | 171 | 6 | 125 | 376 | 63 | 311 | 3.99e-19 | 89.4 |
| MS.gene034271.t1 | MTR_8g033410 | 25.670 | 261 | 173 | 6 | 150 | 404 | 79 | 324 | 1.33e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034271.t1 | AT1G17745 | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| MS.gene034271.t1 | AT1G17745 | 72.657 | 651 | 138 | 6 | 16 | 628 | 3 | 651 | 0.0 | 937 |
| MS.gene034271.t1 | AT4G34200 | 77.034 | 553 | 127 | 0 | 76 | 628 | 51 | 603 | 0.0 | 892 |
| MS.gene034271.t1 | AT3G19480 | 76.427 | 543 | 128 | 0 | 86 | 628 | 46 | 588 | 0.0 | 869 |
| MS.gene034271.t1 | AT1G68010 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.13e-31 | 127 |
| MS.gene034271.t1 | AT1G68010 | 34.737 | 285 | 163 | 7 | 115 | 377 | 50 | 333 | 7.09e-31 | 124 |
| MS.gene034271.t1 | AT1G68010 | 34.783 | 299 | 171 | 8 | 115 | 390 | 50 | 347 | 3.52e-30 | 123 |
| MS.gene034271.t1 | AT1G79870 | 30.980 | 255 | 165 | 6 | 150 | 402 | 68 | 313 | 1.86e-27 | 113 |
| MS.gene034271.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 112 | 333 | 4.08e-27 | 114 |
| MS.gene034271.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 100 | 321 | 4.51e-27 | 113 |
| MS.gene034271.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 126 | 347 | 9.65e-27 | 113 |
| MS.gene034271.t1 | AT1G12550 | 29.352 | 293 | 186 | 8 | 117 | 404 | 43 | 319 | 1.33e-26 | 111 |
| MS.gene034271.t1 | AT1G72190 | 30.380 | 237 | 154 | 4 | 150 | 377 | 116 | 350 | 3.48e-26 | 111 |
| MS.gene034271.t1 | AT2G45630 | 28.179 | 291 | 193 | 8 | 117 | 404 | 59 | 336 | 2.68e-22 | 99.0 |
| MS.gene034271.t1 | AT1G79870 | 29.528 | 254 | 151 | 6 | 150 | 402 | 68 | 294 | 6.80e-22 | 97.1 |
Find 133 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | 4.2:+93367118 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | 4.2:+93367390 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | 4.2:-93369680 | MS.gene034271:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | 4.2:+93368187 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | 4.2:-93370085 | MS.gene034271:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | 4.2:-93368974 | MS.gene034271:CDS |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | 4.2:-93367316 | MS.gene034271:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | 4.2:+93367416 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | 4.2:+93369552 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | 4.2:+93369824 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | 4.2:+93368250 | None:intergenic |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | 4.2:-93368967 | MS.gene034271:CDS |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | 4.2:+93370054 | None:intergenic |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | 4.2:-93367112 | MS.gene034271:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | 4.2:-93367229 | MS.gene034271:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | 4.2:-93367725 | MS.gene034271:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | 4.2:-93368973 | MS.gene034271:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | 4.2:+93367538 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | 4.2:+93370083 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | 4.2:-93367161 | MS.gene034271:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | 4.2:+93370099 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | 4.2:+93368775 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | 4.2:+93369898 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | 4.2:-93367131 | MS.gene034271:CDS |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | 4.2:+93368880 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | 4.2:+93369553 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | 4.2:-93367295 | MS.gene034271:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | 4.2:-93369734 | MS.gene034271:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | 4.2:+93367603 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | 4.2:-93367502 | MS.gene034271:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | 4.2:-93368998 | MS.gene034271:CDS |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | 4.2:-93368958 | MS.gene034271:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | 4.2:-93367250 | MS.gene034271:CDS |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | 4.2:-93368673 | MS.gene034271:CDS |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | 4.2:+93368193 | None:intergenic |
| TTGGTTTCAGAAGAGAAGAT+AGG | 0.433144 | 4.2:+93370133 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | 4.2:-93368925 | MS.gene034271:CDS |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | 4.2:-93369603 | MS.gene034271:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | 4.2:+93367515 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | 4.2:-93367349 | MS.gene034271:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | 4.2:+93369955 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | 4.2:-93367154 | MS.gene034271:CDS |
| GTGATTGCTACTCCTCATCT+TGG | 0.451139 | 4.2:-93368218 | MS.gene034271:CDS |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | 4.2:-93369899 | MS.gene034271:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | 4.2:+93367700 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | 4.2:-93367092 | MS.gene034271:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | 4.2:-93369585 | MS.gene034271:CDS |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | 4.2:+93367430 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | 4.2:-93367667 | MS.gene034271:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | 4.2:+93367648 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | 4.2:-93368931 | MS.gene034271:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | 4.2:-93368006 | MS.gene034271:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | 4.2:-93367620 | MS.gene034271:CDS |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | 4.2:+93368254 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | 4.2:-93369725 | MS.gene034271:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | 4.2:-93368041 | MS.gene034271:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | 4.2:-93368053 | MS.gene034271:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | 4.2:-93369758 | MS.gene034271:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | 4.2:-93368659 | MS.gene034271:intron |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | 4.2:-93367994 | MS.gene034271:intron |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | 4.2:-93367707 | MS.gene034271:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | 4.2:+93370165 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | 4.2:-93369626 | MS.gene034271:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | 4.2:+93367317 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | 4.2:+93367594 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | 4.2:-93367621 | MS.gene034271:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | 4.2:-93367571 | MS.gene034271:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | 4.2:-93367658 | MS.gene034271:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | 4.2:+93367587 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | 4.2:+93367579 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | 4.2:+93367595 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | 4.2:-93369867 | MS.gene034271:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | 4.2:+93367402 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | 4.2:+93368881 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | 4.2:+93367479 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | 4.2:+93367439 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | 4.2:-93367259 | MS.gene034271:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | 4.2:+93367082 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | 4.2:+93368206 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | 4.2:-93367638 | MS.gene034271:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | 4.2:-93369718 | MS.gene034271:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | 4.2:-93368081 | MS.gene034271:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | 4.2:+93368257 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | 4.2:+93368784 | None:intergenic |
| TCAGAAGAGAAGATAGGTGA+AGG | 0.543290 | 4.2:+93370139 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | 4.2:+93368871 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | 4.2:-93368947 | MS.gene034271:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | 4.2:-93368195 | MS.gene034271:intron |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | 4.2:+93367990 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | 4.2:-93367382 | MS.gene034271:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | 4.2:+93369914 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | 4.2:+93367611 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | 4.2:-93369719 | MS.gene034271:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | 4.2:-93367294 | MS.gene034271:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | 4.2:+93367241 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | 4.2:-93367690 | MS.gene034271:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | 4.2:-93368868 | MS.gene034271:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | 4.2:-93369908 | MS.gene034271:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | 4.2:-93368993 | MS.gene034271:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | 4.2:+93370075 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | 4.2:-93367674 | MS.gene034271:CDS |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | 4.2:-93369009 | MS.gene034271:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | 4.2:+93369816 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | 4.2:-93367364 | MS.gene034271:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | 4.2:-93369752 | MS.gene034271:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | 4.2:-93368715 | MS.gene034271:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | 4.2:+93370153 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | 4.2:-93368994 | MS.gene034271:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | 4.2:-93367626 | MS.gene034271:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | 4.2:-93369563 | MS.gene034271:intron |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | 4.2:-93367241 | MS.gene034271:CDS |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | 4.2:+93369638 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | 4.2:-93367325 | MS.gene034271:CDS |
| TACACCACACCTTACATGTG+TGG | 0.602905 | 4.2:-93367326 | MS.gene034271:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | 4.2:-93369625 | MS.gene034271:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | 4.2:-93369757 | MS.gene034271:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | 4.2:-93369705 | MS.gene034271:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | 4.2:-93367694 | MS.gene034271:CDS |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | 4.2:-93367473 | MS.gene034271:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | 4.2:-93368942 | MS.gene034271:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | 4.2:-93367416 | MS.gene034271:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | 4.2:-93367258 | MS.gene034271:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | 4.2:-93367619 | MS.gene034271:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | 4.2:-93367485 | MS.gene034271:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | 4.2:+93367322 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | 4.2:-93367177 | MS.gene034271:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | 4.2:-93367193 | MS.gene034271:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | 4.2:-93367664 | MS.gene034271:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | 4.2:-93368063 | MS.gene034271:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | 4.2:-93368718 | MS.gene034271:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | 4.2:-93369791 | MS.gene034271:CDS |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | 4.2:-93368282 | MS.gene034271:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | 4.2:+93368810 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGTTTAATAGTATTAG+TGG | - | chr4.2:93367772-93367791 | MS.gene034271:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | - | chr4.2:93367843-93367862 | MS.gene034271:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | - | chr4.2:93368009-93368028 | MS.gene034271:CDS | 15.0% |
| !! | AAATAGTAAATGGTAATTCA+AGG | + | chr4.2:93368726-93368745 | None:intergenic | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | + | chr4.2:93369141-93369160 | None:intergenic | 20.0% |
| !! | GATAGTATAATAGTAATTCA+AGG | + | chr4.2:93368636-93368655 | None:intergenic | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | + | chr4.2:93368158-93368177 | None:intergenic | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | + | chr4.2:93368919-93368938 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | - | chr4.2:93368929-93368948 | MS.gene034271:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | - | chr4.2:93368093-93368112 | MS.gene034271:intron | 20.0% |
| !!! | TGAATTACCATTTACTATTT+TGG | - | chr4.2:93368726-93368745 | MS.gene034271:CDS | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | - | chr4.2:93367366-93367385 | MS.gene034271:CDS | 20.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | + | chr4.2:93368613-93368632 | None:intergenic | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | - | chr4.2:93367823-93367842 | MS.gene034271:intron | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | + | chr4.2:93369116-93369135 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | - | chr4.2:93369334-93369353 | MS.gene034271:intron | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | + | chr4.2:93369115-93369134 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | - | chr4.2:93367815-93367834 | MS.gene034271:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | - | chr4.2:93369335-93369354 | MS.gene034271:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | + | chr4.2:93368469-93368488 | None:intergenic | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | + | chr4.2:93369706-93369725 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | + | chr4.2:93369335-93369354 | None:intergenic | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | - | chr4.2:93369402-93369421 | MS.gene034271:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | - | chr4.2:93368212-93368231 | MS.gene034271:CDS | 25.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | + | chr4.2:93367130-93367149 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | - | chr4.2:93367956-93367975 | MS.gene034271:intron | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | + | chr4.2:93367266-93367285 | None:intergenic | 25.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | - | chr4.2:93367507-93367526 | MS.gene034271:CDS | 30.0% | |
| AAATGAAAAACCAACGATCT+TGG | - | chr4.2:93367317-93367336 | MS.gene034271:CDS | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | + | chr4.2:93369464-93369483 | None:intergenic | 30.0% | |
| AGCATACTAATGTTACAATG+TGG | + | chr4.2:93369284-93369303 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | + | chr4.2:93367190-93367209 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | + | chr4.2:93369090-93369109 | None:intergenic | 30.0% | |
| GCGATTTCCAAAATAGTAAA+TGG | + | chr4.2:93368736-93368755 | None:intergenic | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | - | chr4.2:93368268-93368287 | MS.gene034271:CDS | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | - | chr4.2:93369501-93369520 | MS.gene034271:intron | 30.0% | |
| TCAAGGAACATGTAAACTAT+AGG | + | chr4.2:93368709-93368728 | None:intergenic | 30.0% | |
| TGGGAAAACATTAGCAATAA+TGG | - | chr4.2:93368267-93368286 | MS.gene034271:CDS | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | + | chr4.2:93369680-93369699 | None:intergenic | 30.0% |
| ! | ACATTAGCAATAATGGGATT+TGG | - | chr4.2:93368274-93368293 | MS.gene034271:CDS | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | - | chr4.2:93368177-93368196 | MS.gene034271:intron | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | - | chr4.2:93368496-93368515 | MS.gene034271:intron | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | - | chr4.2:93368283-93368302 | MS.gene034271:CDS | 30.0% |
| ! | CCAACTGCAATTTAAAACTT+TGG | + | chr4.2:93367958-93367977 | None:intergenic | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | - | chr4.2:93368495-93368514 | MS.gene034271:intron | 30.0% |
| ! | TTTAAGACAATTAGGACATG+TGG | - | chr4.2:93367374-93367393 | MS.gene034271:CDS | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | - | chr4.2:93369154-93369173 | MS.gene034271:intron | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | - | chr4.2:93367955-93367974 | MS.gene034271:intron | 30.0% |
| !!! | CTCATCAATTTTGACTCAAT+AGG | - | chr4.2:93369151-93369170 | MS.gene034271:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | - | chr4.2:93368205-93368224 | MS.gene034271:CDS | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | - | chr4.2:93369155-93369174 | MS.gene034271:intron | 30.0% |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | + | chr4.2:93367259-93367278 | None:intergenic | 30.0% |
| AAAACAAACCTGTGCTTCTT+TGG | + | chr4.2:93369057-93369076 | None:intergenic | 35.0% | |
| AACAACAGAAACAACGTTGT+TGG | + | chr4.2:93367289-93367308 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | - | chr4.2:93370129-93370148 | MS.gene034271:CDS | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | - | chr4.2:93368523-93368542 | MS.gene034271:intron | 35.0% | |
| AGTTTAGACATAGGTCACAT+TGG | - | chr4.2:93369411-93369430 | MS.gene034271:intron | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | + | chr4.2:93367700-93367719 | None:intergenic | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | - | chr4.2:93369892-93369911 | MS.gene034271:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | + | chr4.2:93369828-93369847 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | - | chr4.2:93369825-93369844 | MS.gene034271:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | + | chr4.2:93369729-93369748 | None:intergenic | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | + | chr4.2:93368876-93368895 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | - | chr4.2:93369739-93369758 | MS.gene034271:CDS | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | - | chr4.2:93367887-93367906 | MS.gene034271:intron | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | - | chr4.2:93370012-93370031 | MS.gene034271:CDS | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | + | chr4.2:93367145-93367164 | None:intergenic | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | - | chr4.2:93369516-93369535 | MS.gene034271:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | - | chr4.2:93369603-93369622 | MS.gene034271:CDS | 35.0% | |
| TGTAAAAGTGGTTTACCGAT+CGG | - | chr4.2:93369615-93369634 | MS.gene034271:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | - | chr4.2:93368568-93368587 | MS.gene034271:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | + | chr4.2:93368000-93368019 | None:intergenic | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | + | chr4.2:93370126-93370145 | None:intergenic | 35.0% | |
| TTGCACTAACTTACTGTCTT+TGG | + | chr4.2:93368994-93369013 | None:intergenic | 35.0% | |
| TTGGTTTCAGAAGAGAAGAT+AGG | + | chr4.2:93367111-93367130 | None:intergenic | 35.0% | |
| ! | GCATAGTTTAATTTCCATGG+AGG | + | chr4.2:93369332-93369351 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | + | chr4.2:93367169-93367188 | None:intergenic | 35.0% |
| ! | TTCCTTAACTCCAACACTTT+TGG | - | chr4.2:93367156-93367175 | MS.gene034271:CDS | 35.0% |
| !! | AATTGAGTTGGTACAAGAAG+AGG | + | chr4.2:93367079-93367098 | None:intergenic | 35.0% |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | - | chr4.2:93368935-93368954 | MS.gene034271:CDS | 35.0% |
| !! | GGTAAACCACTTTTACAGAT+TGG | + | chr4.2:93369612-93369631 | None:intergenic | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | + | chr4.2:93367161-93367180 | None:intergenic | 35.0% |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | + | chr4.2:93369266-93369285 | None:intergenic | 35.0% |
| AACACAAACTCCTCAATAGC+AGG | + | chr4.2:93370162-93370181 | None:intergenic | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | + | chr4.2:93368990-93369009 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | + | chr4.2:93367428-93367447 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | + | chr4.2:93367091-93367110 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | - | chr4.2:93368526-93368545 | MS.gene034271:intron | 40.0% | |
| ATCTTCTTGCATAGGTCTTC+TGG | + | chr4.2:93367420-93367439 | None:intergenic | 40.0% | |
| CAAAAGATCCCACACATGTA+AGG | + | chr4.2:93369927-93369946 | None:intergenic | 40.0% | |
| CTACAAGCTGCTACTGAATT+TGG | - | chr4.2:93367561-93367580 | MS.gene034271:CDS | 40.0% | |
| CTAGCAATGTTCAACTCGTT+TGG | - | chr4.2:93368662-93368681 | MS.gene034271:CDS | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | + | chr4.2:93369522-93369541 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | - | chr4.2:93367450-93367469 | MS.gene034271:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | + | chr4.2:93367606-93367625 | None:intergenic | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | + | chr4.2:93368434-93368453 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | - | chr4.2:93367656-93367675 | MS.gene034271:CDS | 40.0% | |
| TCAGAAGAGAAGATAGGTGA+AGG | + | chr4.2:93367105-93367124 | None:intergenic | 40.0% | |
| TGATACAGCACTTGCGAATT+TGG | + | chr4.2:93369854-93369873 | None:intergenic | 40.0% | |
| TGGAAAAGTTGGATCTGAAG+TGG | - | chr4.2:93368294-93368313 | MS.gene034271:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | - | chr4.2:93368746-93368765 | MS.gene034271:CDS | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | - | chr4.2:93369178-93369197 | MS.gene034271:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | - | chr4.2:93368671-93368690 | MS.gene034271:CDS | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | + | chr4.2:93368460-93368479 | None:intergenic | 40.0% | |
| ! | AATGTGAGCTTTATGAGCGT+CGG | - | chr4.2:93370048-93370067 | MS.gene034271:CDS | 40.0% |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | - | chr4.2:93367483-93367502 | MS.gene034271:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | - | chr4.2:93368248-93368267 | MS.gene034271:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | - | chr4.2:93367484-93367503 | MS.gene034271:CDS | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | - | chr4.2:93368243-93368262 | MS.gene034271:CDS | 40.0% |
| ! | CTTACATGTGTGGGATCTTT+TGG | - | chr4.2:93369925-93369944 | MS.gene034271:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | - | chr4.2:93368247-93368266 | MS.gene034271:CDS | 40.0% |
| ! | TGTATCTGGATTGACTCAAC+AGG | + | chr4.2:93369814-93369833 | None:intergenic | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | - | chr4.2:93367516-93367535 | MS.gene034271:CDS | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | - | chr4.2:93368218-93368237 | MS.gene034271:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | - | chr4.2:93370087-93370106 | MS.gene034271:CDS | 40.0% |
| !! | ACTGGTCAGATAAGCATTGA+CGG | - | chr4.2:93369877-93369896 | MS.gene034271:CDS | 40.0% |
| !! | ATGTACCATACCGGCTTTAA+GGG | + | chr4.2:93367691-93367710 | None:intergenic | 40.0% |
| !! | CTCTCAACAACGTTGTTTTG+TGG | - | chr4.2:93367215-93367234 | MS.gene034271:CDS | 40.0% |
| !! | TGATAGTGGAATTGTTGCTC+AGG | - | chr4.2:93368582-93368601 | MS.gene034271:intron | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | - | chr4.2:93367536-93367555 | MS.gene034271:CDS | 40.0% |
| AACTGCTGTCAATGCTCCTA+TGG | - | chr4.2:93369235-93369254 | MS.gene034271:intron | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | + | chr4.2:93368987-93369006 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | + | chr4.2:93369650-93369669 | None:intergenic | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | - | chr4.2:93369916-93369935 | MS.gene034271:CDS | 45.0% | |
| ACTATTGCTGCTGCTGAACA+TGG | - | chr4.2:93367615-93367634 | MS.gene034271:CDS | 45.0% | |
| AGATTGGATTCCACTTCCTC+CGG | + | chr4.2:93369596-93369615 | None:intergenic | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | - | chr4.2:93368959-93368978 | MS.gene034271:CDS | 45.0% | |
| ATCTTGGTCTCCGAGAAACT+CGG | - | chr4.2:93367333-93367352 | MS.gene034271:CDS | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | + | chr4.2:93369322-93369341 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | - | chr4.2:93368804-93368823 | MS.gene034271:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | - | chr4.2:93369768-93369787 | MS.gene034271:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | - | chr4.2:93370000-93370019 | MS.gene034271:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | - | chr4.2:93370110-93370129 | MS.gene034271:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | - | chr4.2:93367616-93367635 | MS.gene034271:CDS | 45.0% | |
| CTCTATCAGCTGGAGCATAA+GGG | + | chr4.2:93368363-93368382 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | - | chr4.2:93369670-93369689 | MS.gene034271:CDS | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | - | chr4.2:93369188-93369207 | MS.gene034271:intron | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | - | chr4.2:93367638-93367657 | MS.gene034271:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | - | chr4.2:93369200-93369219 | MS.gene034271:intron | 45.0% | |
| GTGATTGCTACTCCTCATCT+TGG | - | chr4.2:93369023-93369042 | MS.gene034271:intron | 45.0% | |
| GTGTGGATGTGAGCTTAGAA+GGG | - | chr4.2:93369947-93369966 | MS.gene034271:CDS | 45.0% | |
| TACACCACACCTTACATGTG+TGG | - | chr4.2:93369915-93369934 | MS.gene034271:CDS | 45.0% | |
| TGCGAATTTGGACTCCACAT+TGG | + | chr4.2:93369842-93369861 | None:intergenic | 45.0% | |
| TGGCTGAGGAACAAGTATGT+TGG | - | chr4.2:93368232-93368251 | MS.gene034271:CDS | 45.0% | |
| TTCTCAGCCAGCACAACATA+TGG | + | chr4.2:93369544-93369563 | None:intergenic | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | + | chr4.2:93369254-93369273 | None:intergenic | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | - | chr4.2:93369160-93369179 | MS.gene034271:intron | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | - | chr4.2:93368299-93368318 | MS.gene034271:intron | 45.0% |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | - | chr4.2:93369930-93369949 | MS.gene034271:CDS | 45.0% |
| ! | ATTGACTCAACAGGTAGCTC+AGG | + | chr4.2:93369805-93369824 | None:intergenic | 45.0% |
| ! | ATTGGCTCCATATGTTGTGC+TGG | - | chr4.2:93369534-93369553 | MS.gene034271:intron | 45.0% |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | - | chr4.2:93367489-93367508 | MS.gene034271:CDS | 45.0% |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | - | chr4.2:93369574-93369593 | MS.gene034271:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | - | chr4.2:93367523-93367542 | MS.gene034271:CDS | 45.0% |
| !! | CATGTACCATACCGGCTTTA+AGG | + | chr4.2:93367692-93367711 | None:intergenic | 45.0% |
| AAAAGGCCTTCGCATAAGCG+AGG | - | chr4.2:93369756-93369775 | MS.gene034271:CDS | 50.0% | |
| AAGACCATAGTCAGCCTCCA+TGG | - | chr4.2:93369315-93369334 | MS.gene034271:intron | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | - | chr4.2:93369991-93370010 | MS.gene034271:CDS | 50.0% | |
| AGTCTGGTGTCTAGGTCATC+GGG | + | chr4.2:93369649-93369668 | None:intergenic | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | + | chr4.2:93370003-93370022 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | + | chr4.2:93369657-93369676 | None:intergenic | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | + | chr4.2:93369765-93369784 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | + | chr4.2:93369665-93369684 | None:intergenic | 50.0% | |
| GATCCCACACATGTAAGGTG+TGG | + | chr4.2:93369922-93369941 | None:intergenic | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | - | chr4.2:93368316-93368335 | MS.gene034271:intron | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | + | chr4.2:93368364-93368383 | None:intergenic | 50.0% | |
| GCTGATGCTTCCCTTAAAGC+CGG | - | chr4.2:93367678-93367697 | MS.gene034271:CDS | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | - | chr4.2:93369946-93369965 | MS.gene034271:CDS | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | - | chr4.2:93367683-93367702 | MS.gene034271:CDS | 50.0% | |
| TTCTCGGAGACCAAGATCGT+TGG | + | chr4.2:93367330-93367349 | None:intergenic | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | + | chr4.2:93369051-93369070 | None:intergenic | 50.0% |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | - | chr4.2:93369567-93369586 | MS.gene034271:CDS | 50.0% |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | - | chr4.2:93369859-93369878 | MS.gene034271:CDS | 50.0% |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | - | chr4.2:93367522-93367541 | MS.gene034271:CDS | 50.0% |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | - | chr4.2:93370080-93370099 | MS.gene034271:CDS | 50.0% |
| AAGTGGTTTACCGATCGGCC+AGG | - | chr4.2:93369620-93369639 | MS.gene034271:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | + | chr4.2:93368373-93368392 | None:intergenic | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | - | chr4.2:93369621-93369640 | MS.gene034271:CDS | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | - | chr4.2:93368310-93368329 | MS.gene034271:intron | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | - | chr4.2:93369983-93370002 | MS.gene034271:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | + | chr4.2:93367346-93367365 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | - | chr4.2:93368373-93368392 | MS.gene034271:intron | 55.0% | |
| TCCGAGAAACTCGGAGAAGC+AGG | - | chr4.2:93367342-93367361 | MS.gene034271:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | - | chr4.2:93369982-93370001 | MS.gene034271:CDS | 55.0% | |
| TGCTCCTATGGTTGCTCCTG+AGG | - | chr4.2:93369247-93369266 | MS.gene034271:intron | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | - | chr4.2:93370149-93370168 | MS.gene034271:CDS | 55.0% | |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | - | chr4.2:93369046-93369065 | MS.gene034271:intron | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | - | chr4.2:93369583-93369602 | MS.gene034271:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | - | chr4.2:93369551-93369570 | MS.gene034271:intron | 55.0% |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | - | chr4.2:93369547-93369566 | MS.gene034271:intron | 55.0% |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | + | chr4.2:93369038-93369057 | None:intergenic | 55.0% |
| GCGTCGGAAGAACATCGCGT+AGG | - | chr4.2:93370064-93370083 | MS.gene034271:CDS | 60.0% | |
| GTGGTTTACCGATCGGCCAG+GGG | - | chr4.2:93369622-93369641 | MS.gene034271:CDS | 60.0% | |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | - | chr4.2:93369577-93369596 | MS.gene034271:CDS | 60.0% |
| GTCTAGGTCATCGGGACCCC+TGG | + | chr4.2:93369641-93369660 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | + | chr4.2:93369633-93369652 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 93367069 | 93370194 | 93367069 | ID=MS.gene034271 |
| chr4.2 | mRNA | 93367069 | 93370194 | 93367069 | ID=MS.gene034271.t1;Parent=MS.gene034271 |
| chr4.2 | exon | 93369564 | 93370194 | 93369564 | ID=MS.gene034271.t1.exon1;Parent=MS.gene034271.t1 |
| chr4.2 | CDS | 93369564 | 93370194 | 93369564 | ID=cds.MS.gene034271.t1;Parent=MS.gene034271.t1 |
| chr4.2 | exon | 93368660 | 93369036 | 93368660 | ID=MS.gene034271.t1.exon2;Parent=MS.gene034271.t1 |
| chr4.2 | CDS | 93368660 | 93369036 | 93368660 | ID=cds.MS.gene034271.t1;Parent=MS.gene034271.t1 |
| chr4.2 | exon | 93368196 | 93368306 | 93368196 | ID=MS.gene034271.t1.exon3;Parent=MS.gene034271.t1 |
| chr4.2 | CDS | 93368196 | 93368306 | 93368196 | ID=cds.MS.gene034271.t1;Parent=MS.gene034271.t1 |
| chr4.2 | exon | 93367995 | 93368090 | 93367995 | ID=MS.gene034271.t1.exon4;Parent=MS.gene034271.t1 |
| chr4.2 | CDS | 93367995 | 93368090 | 93367995 | ID=cds.MS.gene034271.t1;Parent=MS.gene034271.t1 |
| chr4.2 | exon | 93367069 | 93367740 | 93367069 | ID=MS.gene034271.t1.exon5;Parent=MS.gene034271.t1 |
| chr4.2 | CDS | 93367069 | 93367740 | 93367069 | ID=cds.MS.gene034271.t1;Parent=MS.gene034271.t1 |
| Gene Sequence |
| Protein sequence |
