Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98151.t1 | XP_003604140.1 | 97.2 | 634 | 13 | 3 | 1 | 633 | 1 | 630 | 0.00E+00 | 1113.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98151.t1 | O04130 | 77.9 | 602 | 125 | 3 | 38 | 633 | 25 | 624 | 1.8e-257 | 889.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98151.t1 | G7JVK0 | 97.2 | 634 | 13 | 3 | 1 | 633 | 1 | 630 | 0.0e+00 | 1113.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049711 | MS.gene98151 | 0.813865 | 2.06E-51 | -1.69E-46 |
| MS.gene049824 | MS.gene98151 | 0.835786 | 1.37E-56 | -1.69E-46 |
| MS.gene050559 | MS.gene98151 | 0.838024 | 3.68E-57 | -1.69E-46 |
| MS.gene050561 | MS.gene98151 | 0.837072 | 6.45E-57 | -1.69E-46 |
| MS.gene050562 | MS.gene98151 | 0.84457 | 6.96E-59 | -1.69E-46 |
| MS.gene051021 | MS.gene98151 | 0.813075 | 3.07E-51 | -1.69E-46 |
| MS.gene051279 | MS.gene98151 | 0.83896 | 2.11E-57 | -1.69E-46 |
| MS.gene051744 | MS.gene98151 | 0.838623 | 2.58E-57 | -1.69E-46 |
| MS.gene052239 | MS.gene98151 | -0.804196 | 2.43E-49 | -1.69E-46 |
| MS.gene052768 | MS.gene98151 | 0.803652 | 3.15E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene98151 | 0.842905 | 1.94E-58 | -1.69E-46 |
| MS.gene056050 | MS.gene98151 | 0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene058668 | MS.gene98151 | 0.800016 | 1.76E-48 | -1.69E-46 |
| MS.gene059774 | MS.gene98151 | 0.800646 | 1.31E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene026951 | MS.gene98151 | PPI |
| MS.gene64242 | MS.gene98151 | PPI |
| MS.gene98151 | MS.gene029581 | PPI |
| MS.gene71690 | MS.gene98151 | PPI |
| MS.gene34189 | MS.gene98151 | PPI |
| MS.gene064936 | MS.gene98151 | PPI |
| MS.gene026953 | MS.gene98151 | PPI |
| MS.gene92996 | MS.gene98151 | PPI |
| MS.gene073953 | MS.gene98151 | PPI |
| MS.gene065682 | MS.gene98151 | PPI |
| MS.gene53578 | MS.gene98151 | PPI |
| MS.gene98151 | MS.gene82938 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98151.t1 | MTR_4g005880 | 97.319 | 634 | 12 | 3 | 1 | 633 | 1 | 630 | 0.0 | 1236 |
| MS.gene98151.t1 | MTR_1g107480 | 77.939 | 553 | 122 | 0 | 81 | 633 | 45 | 597 | 0.0 | 903 |
| MS.gene98151.t1 | MTR_1g112510 | 34.564 | 298 | 172 | 7 | 120 | 395 | 50 | 346 | 2.73e-32 | 129 |
| MS.gene98151.t1 | MTR_3g005970 | 31.890 | 254 | 153 | 5 | 154 | 390 | 117 | 367 | 3.30e-30 | 123 |
| MS.gene98151.t1 | MTR_4g013100 | 29.412 | 255 | 171 | 4 | 154 | 407 | 68 | 314 | 5.88e-29 | 117 |
| MS.gene98151.t1 | MTR_4g013090 | 29.183 | 257 | 167 | 5 | 155 | 407 | 68 | 313 | 7.44e-28 | 114 |
| MS.gene98151.t1 | MTR_4g012960 | 27.907 | 258 | 172 | 4 | 154 | 411 | 67 | 310 | 1.38e-26 | 110 |
| MS.gene98151.t1 | MTR_6g007170 | 30.120 | 249 | 164 | 4 | 155 | 396 | 122 | 367 | 5.23e-26 | 110 |
| MS.gene98151.t1 | MTR_8g033390 | 29.811 | 265 | 167 | 6 | 155 | 414 | 76 | 326 | 3.67e-23 | 101 |
| MS.gene98151.t1 | MTR_4g013135 | 31.154 | 260 | 164 | 6 | 154 | 411 | 67 | 313 | 5.16e-22 | 97.8 |
| MS.gene98151.t1 | MTR_2g101840 | 29.885 | 261 | 161 | 7 | 155 | 407 | 68 | 314 | 6.41e-20 | 91.7 |
| MS.gene98151.t1 | MTR_6g007175 | 27.347 | 245 | 157 | 4 | 155 | 396 | 91 | 317 | 1.46e-19 | 90.9 |
| MS.gene98151.t1 | MTR_8g033400 | 28.405 | 257 | 171 | 6 | 130 | 381 | 63 | 311 | 3.93e-19 | 89.4 |
| MS.gene98151.t1 | MTR_8g033410 | 25.670 | 261 | 173 | 6 | 155 | 409 | 79 | 324 | 1.30e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98151.t1 | AT1G17745 | 76.442 | 624 | 139 | 3 | 16 | 633 | 3 | 624 | 0.0 | 964 |
| MS.gene98151.t1 | AT1G17745 | 73.118 | 651 | 140 | 5 | 16 | 633 | 3 | 651 | 0.0 | 945 |
| MS.gene98151.t1 | AT4G34200 | 77.034 | 553 | 127 | 0 | 81 | 633 | 51 | 603 | 0.0 | 893 |
| MS.gene98151.t1 | AT3G19480 | 76.427 | 543 | 128 | 0 | 91 | 633 | 46 | 588 | 0.0 | 870 |
| MS.gene98151.t1 | AT1G68010 | 34.564 | 298 | 172 | 7 | 120 | 395 | 50 | 346 | 1.10e-31 | 127 |
| MS.gene98151.t1 | AT1G68010 | 34.386 | 285 | 164 | 7 | 120 | 382 | 50 | 333 | 8.26e-31 | 124 |
| MS.gene98151.t1 | AT1G68010 | 34.783 | 299 | 171 | 8 | 120 | 395 | 50 | 347 | 3.79e-30 | 123 |
| MS.gene98151.t1 | AT1G79870 | 30.980 | 255 | 165 | 6 | 155 | 407 | 68 | 313 | 1.75e-27 | 113 |
| MS.gene98151.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 161 | 378 | 112 | 333 | 4.16e-27 | 114 |
| MS.gene98151.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 161 | 378 | 100 | 321 | 4.18e-27 | 113 |
| MS.gene98151.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 161 | 378 | 126 | 347 | 9.13e-27 | 113 |
| MS.gene98151.t1 | AT1G12550 | 29.352 | 293 | 186 | 8 | 122 | 409 | 43 | 319 | 9.72e-27 | 111 |
| MS.gene98151.t1 | AT1G72190 | 30.380 | 237 | 154 | 4 | 155 | 382 | 116 | 350 | 2.78e-26 | 111 |
| MS.gene98151.t1 | AT2G45630 | 28.179 | 291 | 193 | 8 | 122 | 409 | 59 | 336 | 2.06e-22 | 99.4 |
| MS.gene98151.t1 | AT1G79870 | 29.528 | 254 | 151 | 6 | 155 | 407 | 68 | 294 | 5.60e-22 | 97.1 |
Find 134 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | 4.1:+89090205 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | 4.1:+89090477 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | 4.1:-89092768 | MS.gene98151:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | 4.1:+89091274 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | 4.1:-89093173 | MS.gene98151:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | 4.1:-89092060 | MS.gene98151:CDS |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | 4.1:-89090403 | MS.gene98151:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | 4.1:+89090503 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | 4.1:+89092640 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | 4.1:+89092912 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | 4.1:+89091337 | None:intergenic |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | 4.1:-89092053 | MS.gene98151:CDS |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | 4.1:+89093142 | None:intergenic |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | 4.1:-89090199 | MS.gene98151:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | 4.1:-89090316 | MS.gene98151:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | 4.1:-89090812 | MS.gene98151:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | 4.1:-89092059 | MS.gene98151:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | 4.1:+89090625 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | 4.1:+89093171 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | 4.1:-89090248 | MS.gene98151:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | 4.1:+89093187 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | 4.1:+89091861 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | 4.1:+89092986 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | 4.1:-89090218 | MS.gene98151:CDS |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | 4.1:+89091966 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | 4.1:+89092641 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | 4.1:-89090382 | MS.gene98151:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | 4.1:-89092822 | MS.gene98151:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | 4.1:+89090690 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | 4.1:-89090589 | MS.gene98151:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | 4.1:-89092084 | MS.gene98151:CDS |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | 4.1:-89092044 | MS.gene98151:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | 4.1:-89090337 | MS.gene98151:CDS |
| GATGATGAAGAAGAGAAGAT+AGG | 0.425266 | 4.1:+89093236 | None:intergenic |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | 4.1:-89091759 | MS.gene98151:CDS |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | 4.1:+89091280 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | 4.1:-89092011 | MS.gene98151:CDS |
| GTGATTGCCACTCCTCATCT+TGG | 0.435884 | 4.1:-89091305 | MS.gene98151:CDS |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | 4.1:-89092691 | MS.gene98151:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | 4.1:+89090602 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | 4.1:-89090436 | MS.gene98151:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | 4.1:+89093043 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | 4.1:-89090241 | MS.gene98151:CDS |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | 4.1:-89092987 | MS.gene98151:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | 4.1:+89090787 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | 4.1:-89090179 | MS.gene98151:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | 4.1:-89092673 | MS.gene98151:CDS |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | 4.1:+89090517 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | 4.1:-89090754 | MS.gene98151:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | 4.1:+89090735 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | 4.1:-89092017 | MS.gene98151:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | 4.1:-89091093 | MS.gene98151:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | 4.1:-89090707 | MS.gene98151:CDS |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | 4.1:+89091341 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | 4.1:-89092813 | MS.gene98151:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | 4.1:-89091128 | MS.gene98151:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | 4.1:-89091140 | MS.gene98151:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | 4.1:-89092846 | MS.gene98151:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | 4.1:-89091745 | MS.gene98151:intron |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | 4.1:-89091081 | MS.gene98151:intron |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | 4.1:-89090794 | MS.gene98151:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | 4.1:+89093268 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | 4.1:-89092714 | MS.gene98151:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | 4.1:+89090404 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | 4.1:+89090681 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | 4.1:-89090708 | MS.gene98151:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | 4.1:-89090658 | MS.gene98151:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | 4.1:-89090745 | MS.gene98151:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | 4.1:+89090674 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | 4.1:+89090666 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | 4.1:+89090682 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | 4.1:-89092955 | MS.gene98151:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | 4.1:+89090489 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | 4.1:+89091967 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | 4.1:+89090566 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | 4.1:+89090526 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | 4.1:-89090346 | MS.gene98151:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | 4.1:+89090169 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | 4.1:+89091293 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | 4.1:-89090725 | MS.gene98151:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | 4.1:-89092806 | MS.gene98151:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | 4.1:-89091168 | MS.gene98151:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | 4.1:+89091344 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | 4.1:+89091870 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | 4.1:+89091957 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | 4.1:-89092033 | MS.gene98151:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | 4.1:-89091282 | MS.gene98151:intron |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | 4.1:+89091077 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | 4.1:-89090469 | MS.gene98151:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | 4.1:+89093002 | None:intergenic |
| GAAGAAGAGAAGATAGGTGA+AGG | 0.557348 | 4.1:+89093242 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | 4.1:+89090698 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | 4.1:-89092807 | MS.gene98151:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | 4.1:-89090381 | MS.gene98151:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | 4.1:+89090328 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | 4.1:-89090777 | MS.gene98151:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | 4.1:-89091954 | MS.gene98151:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | 4.1:-89092996 | MS.gene98151:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | 4.1:-89092079 | MS.gene98151:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | 4.1:+89093163 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | 4.1:-89090761 | MS.gene98151:CDS |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | 4.1:-89092095 | MS.gene98151:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | 4.1:+89092904 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | 4.1:-89090451 | MS.gene98151:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | 4.1:-89092840 | MS.gene98151:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | 4.1:-89091801 | MS.gene98151:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | 4.1:+89093256 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | 4.1:-89092080 | MS.gene98151:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | 4.1:-89090713 | MS.gene98151:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | 4.1:-89092651 | MS.gene98151:intron |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | 4.1:-89090328 | MS.gene98151:CDS |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | 4.1:+89092726 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | 4.1:-89090412 | MS.gene98151:CDS |
| TACACCACACCTTACATGTG+TGG | 0.602905 | 4.1:-89090413 | MS.gene98151:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | 4.1:-89092713 | MS.gene98151:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | 4.1:-89092845 | MS.gene98151:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | 4.1:-89092793 | MS.gene98151:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | 4.1:-89090781 | MS.gene98151:CDS |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | 4.1:-89090560 | MS.gene98151:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | 4.1:-89092028 | MS.gene98151:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | 4.1:-89090503 | MS.gene98151:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | 4.1:-89090345 | MS.gene98151:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | 4.1:-89090706 | MS.gene98151:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | 4.1:-89090572 | MS.gene98151:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | 4.1:+89090409 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | 4.1:-89090264 | MS.gene98151:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | 4.1:-89090280 | MS.gene98151:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | 4.1:-89090751 | MS.gene98151:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | 4.1:-89091150 | MS.gene98151:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | 4.1:-89091804 | MS.gene98151:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | 4.1:-89092879 | MS.gene98151:CDS |
| GCTGGCTCCAAGATGAGGAG+TGG | 0.717165 | 4.1:+89091298 | None:intergenic |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | 4.1:-89091369 | MS.gene98151:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | 4.1:+89091896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGTTTAATAGTATTAG+TGG | - | chr4.1:89090874-89090893 | MS.gene98151:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | - | chr4.1:89090947-89090966 | MS.gene98151:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | - | chr4.1:89091113-89091132 | MS.gene98151:CDS | 15.0% |
| !! | AAAATAGTAATGGTAATTCA+AGG | + | chr4.1:89091830-89091849 | None:intergenic | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | + | chr4.1:89092244-89092263 | None:intergenic | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | + | chr4.1:89091262-89091281 | None:intergenic | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | + | chr4.1:89092022-89092041 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | - | chr4.1:89092032-89092051 | MS.gene98151:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | - | chr4.1:89091197-89091216 | MS.gene98151:intron | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | - | chr4.1:89090468-89090487 | MS.gene98151:CDS | 20.0% |
| !!! | TTGAATTACCATTACTATTT+TGG | - | chr4.1:89091829-89091848 | MS.gene98151:CDS | 20.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | + | chr4.1:89091717-89091736 | None:intergenic | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | - | chr4.1:89090927-89090946 | MS.gene98151:intron | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | + | chr4.1:89092219-89092238 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | - | chr4.1:89092437-89092456 | MS.gene98151:intron | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | + | chr4.1:89092218-89092237 | None:intergenic | 25.0% |
| ! | GATAGTATAATAGCAATTCA+AGG | + | chr4.1:89091740-89091759 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | - | chr4.1:89090919-89090938 | MS.gene98151:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | - | chr4.1:89092438-89092457 | MS.gene98151:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | + | chr4.1:89091573-89091592 | None:intergenic | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | + | chr4.1:89092809-89092828 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | + | chr4.1:89092438-89092457 | None:intergenic | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | - | chr4.1:89092505-89092524 | MS.gene98151:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | - | chr4.1:89091316-89091335 | MS.gene98151:CDS | 25.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | + | chr4.1:89090232-89090251 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | - | chr4.1:89091060-89091079 | MS.gene98151:intron | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | + | chr4.1:89090368-89090387 | None:intergenic | 25.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | - | chr4.1:89090609-89090628 | MS.gene98151:CDS | 30.0% | |
| AAATGAAAAACCAACGATCT+TGG | - | chr4.1:89090419-89090438 | MS.gene98151:CDS | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | + | chr4.1:89092567-89092586 | None:intergenic | 30.0% | |
| AGCATACTAATGTTACAATG+TGG | + | chr4.1:89092387-89092406 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | + | chr4.1:89090292-89090311 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | + | chr4.1:89092193-89092212 | None:intergenic | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | - | chr4.1:89091372-89091391 | MS.gene98151:CDS | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | - | chr4.1:89092604-89092623 | MS.gene98151:intron | 30.0% | |
| TCAAGGAACATGTAAACTAT+AGG | + | chr4.1:89091813-89091832 | None:intergenic | 30.0% | |
| TGCGATTTCCAAAATAGTAA+TGG | + | chr4.1:89091840-89091859 | None:intergenic | 30.0% | |
| TGGGAAAACATTAGCAATAA+TGG | - | chr4.1:89091371-89091390 | MS.gene98151:CDS | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | + | chr4.1:89092783-89092802 | None:intergenic | 30.0% |
| ! | ACATTAGCAATAATGGGATT+TGG | - | chr4.1:89091378-89091397 | MS.gene98151:intron | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | - | chr4.1:89091281-89091300 | MS.gene98151:intron | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | - | chr4.1:89091600-89091619 | MS.gene98151:intron | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | - | chr4.1:89091387-89091406 | MS.gene98151:intron | 30.0% |
| ! | CCAACTGCAATTTAAAACTT+TGG | + | chr4.1:89091062-89091081 | None:intergenic | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | - | chr4.1:89091599-89091618 | MS.gene98151:intron | 30.0% |
| ! | TTTAAGACAATTAGGACATG+TGG | - | chr4.1:89090476-89090495 | MS.gene98151:CDS | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | - | chr4.1:89092257-89092276 | MS.gene98151:intron | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | - | chr4.1:89091059-89091078 | MS.gene98151:intron | 30.0% |
| !!! | CTCATCAATTTTGACTCAAT+AGG | - | chr4.1:89092254-89092273 | MS.gene98151:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | - | chr4.1:89091309-89091328 | MS.gene98151:CDS | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | - | chr4.1:89092258-89092277 | MS.gene98151:intron | 30.0% |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | + | chr4.1:89090361-89090380 | None:intergenic | 30.0% |
| AAAACAAACCTGTGCTTCTT+TGG | + | chr4.1:89092160-89092179 | None:intergenic | 35.0% | |
| AACAACAGAAACAACGTTGT+TGG | + | chr4.1:89090391-89090410 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | - | chr4.1:89093232-89093251 | MS.gene98151:CDS | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | - | chr4.1:89091627-89091646 | MS.gene98151:intron | 35.0% | |
| AGTTTAGACATAGGTCACAT+TGG | - | chr4.1:89092514-89092533 | MS.gene98151:intron | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | + | chr4.1:89090802-89090821 | None:intergenic | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | - | chr4.1:89092995-89093014 | MS.gene98151:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | + | chr4.1:89092931-89092950 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | - | chr4.1:89092928-89092947 | MS.gene98151:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | + | chr4.1:89092832-89092851 | None:intergenic | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | + | chr4.1:89091979-89091998 | None:intergenic | 35.0% | |
| GATGATGAAGAAGAGAAGAT+AGG | + | chr4.1:89090198-89090217 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | - | chr4.1:89092842-89092861 | MS.gene98151:CDS | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | - | chr4.1:89090991-89091010 | MS.gene98151:intron | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | - | chr4.1:89093115-89093134 | MS.gene98151:CDS | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | + | chr4.1:89090247-89090266 | None:intergenic | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | - | chr4.1:89092619-89092638 | MS.gene98151:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | - | chr4.1:89092706-89092725 | MS.gene98151:CDS | 35.0% | |
| TGTAAAAGTGGTTTACCGAT+CGG | - | chr4.1:89092718-89092737 | MS.gene98151:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | - | chr4.1:89091672-89091691 | MS.gene98151:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | + | chr4.1:89091104-89091123 | None:intergenic | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | + | chr4.1:89093229-89093248 | None:intergenic | 35.0% | |
| TTGCACTAACTTACTGTCTT+TGG | + | chr4.1:89092097-89092116 | None:intergenic | 35.0% | |
| ! | GCATAGTTTAATTTCCATGG+AGG | + | chr4.1:89092435-89092454 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | + | chr4.1:89090271-89090290 | None:intergenic | 35.0% |
| ! | TTCCTTAACTCCAACACTTT+TGG | - | chr4.1:89090258-89090277 | MS.gene98151:CDS | 35.0% |
| !! | AATTGAGTTGGTACAAGAAG+AGG | + | chr4.1:89090166-89090185 | None:intergenic | 35.0% |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | - | chr4.1:89092038-89092057 | MS.gene98151:CDS | 35.0% |
| !! | GGTAAACCACTTTTACAGAT+TGG | + | chr4.1:89092715-89092734 | None:intergenic | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | + | chr4.1:89090263-89090282 | None:intergenic | 35.0% |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | + | chr4.1:89092369-89092388 | None:intergenic | 35.0% |
| AACACAAACTCCTCAATAGC+AGG | + | chr4.1:89093265-89093284 | None:intergenic | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | + | chr4.1:89092093-89092112 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | + | chr4.1:89090530-89090549 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | + | chr4.1:89090178-89090197 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | - | chr4.1:89091630-89091649 | MS.gene98151:intron | 40.0% | |
| ATCTTCTTGCATAGGTCTTC+TGG | + | chr4.1:89090522-89090541 | None:intergenic | 40.0% | |
| CAAAAGATCCCACACATGTA+AGG | + | chr4.1:89093030-89093049 | None:intergenic | 40.0% | |
| CTACAAGCTGCTACTGAATT+TGG | - | chr4.1:89090663-89090682 | MS.gene98151:CDS | 40.0% | |
| CTAGCAATGTTCAACTCGTT+TGG | - | chr4.1:89091766-89091785 | MS.gene98151:CDS | 40.0% | |
| GAAGAAGAGAAGATAGGTGA+AGG | + | chr4.1:89090192-89090211 | None:intergenic | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | + | chr4.1:89092625-89092644 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | - | chr4.1:89090552-89090571 | MS.gene98151:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | + | chr4.1:89090708-89090727 | None:intergenic | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | + | chr4.1:89091538-89091557 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | - | chr4.1:89090758-89090777 | MS.gene98151:CDS | 40.0% | |
| TGATACAGCACTTGCGAATT+TGG | + | chr4.1:89092957-89092976 | None:intergenic | 40.0% | |
| TGGAAAAGTTGGATCTGAAG+TGG | - | chr4.1:89091398-89091417 | MS.gene98151:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | - | chr4.1:89091849-89091868 | MS.gene98151:CDS | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | - | chr4.1:89092281-89092300 | MS.gene98151:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | - | chr4.1:89091775-89091794 | MS.gene98151:CDS | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | + | chr4.1:89091564-89091583 | None:intergenic | 40.0% | |
| ! | AATGTGAGCTTTATGAGCGT+CGG | - | chr4.1:89093151-89093170 | MS.gene98151:CDS | 40.0% |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | - | chr4.1:89090585-89090604 | MS.gene98151:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | - | chr4.1:89091352-89091371 | MS.gene98151:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | - | chr4.1:89090586-89090605 | MS.gene98151:CDS | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | - | chr4.1:89091347-89091366 | MS.gene98151:CDS | 40.0% |
| ! | CTTACATGTGTGGGATCTTT+TGG | - | chr4.1:89093028-89093047 | MS.gene98151:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | - | chr4.1:89091351-89091370 | MS.gene98151:CDS | 40.0% |
| ! | TGTATCTGGATTGACTCAAC+AGG | + | chr4.1:89092917-89092936 | None:intergenic | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | - | chr4.1:89090618-89090637 | MS.gene98151:CDS | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | - | chr4.1:89091322-89091341 | MS.gene98151:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | - | chr4.1:89093190-89093209 | MS.gene98151:CDS | 40.0% |
| !! | ACTGGTCAGATAAGCATTGA+CGG | - | chr4.1:89092980-89092999 | MS.gene98151:CDS | 40.0% |
| !! | ATGTACCATACCGGCTTTAA+GGG | + | chr4.1:89090793-89090812 | None:intergenic | 40.0% |
| !! | CTCTCAACAACGTTGTTTTG+TGG | - | chr4.1:89090317-89090336 | MS.gene98151:CDS | 40.0% |
| !! | TGATAGTGGAATTGTTGCTC+AGG | - | chr4.1:89091686-89091705 | MS.gene98151:intron | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | - | chr4.1:89090638-89090657 | MS.gene98151:CDS | 40.0% |
| AACTGCTGTCAATGCTCCTA+TGG | - | chr4.1:89092338-89092357 | MS.gene98151:intron | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | + | chr4.1:89092090-89092109 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | + | chr4.1:89092753-89092772 | None:intergenic | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | - | chr4.1:89093019-89093038 | MS.gene98151:CDS | 45.0% | |
| ACTATTGCTGCTGCTGAACA+TGG | - | chr4.1:89090717-89090736 | MS.gene98151:CDS | 45.0% | |
| AGATTGGATTCCACTTCCTC+CGG | + | chr4.1:89092699-89092718 | None:intergenic | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | - | chr4.1:89092062-89092081 | MS.gene98151:CDS | 45.0% | |
| ATCTTGGTCTCCGAGAAACT+CGG | - | chr4.1:89090435-89090454 | MS.gene98151:CDS | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | + | chr4.1:89092425-89092444 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | - | chr4.1:89091907-89091926 | MS.gene98151:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | - | chr4.1:89092871-89092890 | MS.gene98151:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | - | chr4.1:89093103-89093122 | MS.gene98151:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | - | chr4.1:89093213-89093232 | MS.gene98151:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | - | chr4.1:89090718-89090737 | MS.gene98151:CDS | 45.0% | |
| CTCTATCAGCTGGAGCATAA+GGG | + | chr4.1:89091467-89091486 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | - | chr4.1:89092773-89092792 | MS.gene98151:CDS | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | - | chr4.1:89092291-89092310 | MS.gene98151:intron | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | - | chr4.1:89090740-89090759 | MS.gene98151:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | - | chr4.1:89092303-89092322 | MS.gene98151:intron | 45.0% | |
| GTGTGGATGTGAGCTTAGAA+GGG | - | chr4.1:89093050-89093069 | MS.gene98151:CDS | 45.0% | |
| TACACCACACCTTACATGTG+TGG | - | chr4.1:89093018-89093037 | MS.gene98151:CDS | 45.0% | |
| TGCGAATTTGGACTCCACAT+TGG | + | chr4.1:89092945-89092964 | None:intergenic | 45.0% | |
| TGGCTGAGGAACAAGTATGT+TGG | - | chr4.1:89091336-89091355 | MS.gene98151:CDS | 45.0% | |
| TTCTCAGCCAGCACAACATA+TGG | + | chr4.1:89092647-89092666 | None:intergenic | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | + | chr4.1:89092357-89092376 | None:intergenic | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | - | chr4.1:89092263-89092282 | MS.gene98151:intron | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | - | chr4.1:89091403-89091422 | MS.gene98151:intron | 45.0% |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | - | chr4.1:89093033-89093052 | MS.gene98151:CDS | 45.0% |
| ! | ATTGACTCAACAGGTAGCTC+AGG | + | chr4.1:89092908-89092927 | None:intergenic | 45.0% |
| ! | ATTGGCTCCATATGTTGTGC+TGG | - | chr4.1:89092637-89092656 | MS.gene98151:intron | 45.0% |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | - | chr4.1:89090591-89090610 | MS.gene98151:CDS | 45.0% |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | - | chr4.1:89092677-89092696 | MS.gene98151:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | - | chr4.1:89090625-89090644 | MS.gene98151:CDS | 45.0% |
| !! | CATGTACCATACCGGCTTTA+AGG | + | chr4.1:89090794-89090813 | None:intergenic | 45.0% |
| AAAAGGCCTTCGCATAAGCG+AGG | - | chr4.1:89092859-89092878 | MS.gene98151:CDS | 50.0% | |
| AAGACCATAGTCAGCCTCCA+TGG | - | chr4.1:89092418-89092437 | MS.gene98151:intron | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | - | chr4.1:89093094-89093113 | MS.gene98151:CDS | 50.0% | |
| AGTCTGGTGTCTAGGTCATC+GGG | + | chr4.1:89092752-89092771 | None:intergenic | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | + | chr4.1:89093106-89093125 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | + | chr4.1:89092760-89092779 | None:intergenic | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | + | chr4.1:89092868-89092887 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | + | chr4.1:89092768-89092787 | None:intergenic | 50.0% | |
| GATCCCACACATGTAAGGTG+TGG | + | chr4.1:89093025-89093044 | None:intergenic | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | - | chr4.1:89091420-89091439 | MS.gene98151:intron | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | + | chr4.1:89091468-89091487 | None:intergenic | 50.0% | |
| GCTGATGCTTCCCTTAAAGC+CGG | - | chr4.1:89090780-89090799 | MS.gene98151:CDS | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | - | chr4.1:89093049-89093068 | MS.gene98151:CDS | 50.0% | |
| GTGATTGCCACTCCTCATCT+TGG | - | chr4.1:89092126-89092145 | MS.gene98151:intron | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | - | chr4.1:89090785-89090804 | MS.gene98151:CDS | 50.0% | |
| TTCTCGGAGACCAAGATCGT+TGG | + | chr4.1:89090432-89090451 | None:intergenic | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | + | chr4.1:89092154-89092173 | None:intergenic | 50.0% |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | - | chr4.1:89092670-89092689 | MS.gene98151:CDS | 50.0% |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | - | chr4.1:89092962-89092981 | MS.gene98151:CDS | 50.0% |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | - | chr4.1:89090624-89090643 | MS.gene98151:CDS | 50.0% |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | - | chr4.1:89093183-89093202 | MS.gene98151:CDS | 50.0% |
| AAGTGGTTTACCGATCGGCC+AGG | - | chr4.1:89092723-89092742 | MS.gene98151:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | + | chr4.1:89091477-89091496 | None:intergenic | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | - | chr4.1:89092724-89092743 | MS.gene98151:CDS | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | - | chr4.1:89091414-89091433 | MS.gene98151:intron | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | - | chr4.1:89093086-89093105 | MS.gene98151:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | + | chr4.1:89090448-89090467 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | - | chr4.1:89091477-89091496 | MS.gene98151:intron | 55.0% | |
| TCCGAGAAACTCGGAGAAGC+AGG | - | chr4.1:89090444-89090463 | MS.gene98151:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | - | chr4.1:89093085-89093104 | MS.gene98151:CDS | 55.0% | |
| TGCTCCTATGGTTGCTCCTG+AGG | - | chr4.1:89092350-89092369 | MS.gene98151:intron | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | - | chr4.1:89093252-89093271 | MS.gene98151:CDS | 55.0% | |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | - | chr4.1:89092149-89092168 | MS.gene98151:intron | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | - | chr4.1:89092686-89092705 | MS.gene98151:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | - | chr4.1:89092654-89092673 | MS.gene98151:CDS | 55.0% |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | - | chr4.1:89092650-89092669 | MS.gene98151:intron | 55.0% |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | + | chr4.1:89092141-89092160 | None:intergenic | 55.0% |
| GCGTCGGAAGAACATCGCGT+AGG | - | chr4.1:89093167-89093186 | MS.gene98151:CDS | 60.0% | |
| GTGGTTTACCGATCGGCCAG+GGG | - | chr4.1:89092725-89092744 | MS.gene98151:CDS | 60.0% | |
| ! | GCTGGCTCCAAGATGAGGAG+TGG | + | chr4.1:89092136-89092155 | None:intergenic | 60.0% |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | - | chr4.1:89092680-89092699 | MS.gene98151:CDS | 60.0% |
| GTCTAGGTCATCGGGACCCC+TGG | + | chr4.1:89092744-89092763 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | + | chr4.1:89092736-89092755 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 89090156 | 89093297 | 89090156 | ID=MS.gene98151 |
| chr4.1 | mRNA | 89090156 | 89093297 | 89090156 | ID=MS.gene98151.t1;Parent=MS.gene98151 |
| chr4.1 | exon | 89092652 | 89093297 | 89092652 | ID=MS.gene98151.t1.exon1;Parent=MS.gene98151.t1 |
| chr4.1 | CDS | 89092652 | 89093297 | 89092652 | ID=cds.MS.gene98151.t1;Parent=MS.gene98151.t1 |
| chr4.1 | exon | 89091746 | 89092122 | 89091746 | ID=MS.gene98151.t1.exon2;Parent=MS.gene98151.t1 |
| chr4.1 | CDS | 89091746 | 89092122 | 89091746 | ID=cds.MS.gene98151.t1;Parent=MS.gene98151.t1 |
| chr4.1 | exon | 89091283 | 89091393 | 89091283 | ID=MS.gene98151.t1.exon3;Parent=MS.gene98151.t1 |
| chr4.1 | CDS | 89091283 | 89091393 | 89091283 | ID=cds.MS.gene98151.t1;Parent=MS.gene98151.t1 |
| chr4.1 | exon | 89091082 | 89091177 | 89091082 | ID=MS.gene98151.t1.exon4;Parent=MS.gene98151.t1 |
| chr4.1 | CDS | 89091082 | 89091177 | 89091082 | ID=cds.MS.gene98151.t1;Parent=MS.gene98151.t1 |
| chr4.1 | exon | 89090156 | 89090827 | 89090156 | ID=MS.gene98151.t1.exon5;Parent=MS.gene98151.t1 |
| chr4.1 | CDS | 89090156 | 89090827 | 89090156 | ID=cds.MS.gene98151.t1;Parent=MS.gene98151.t1 |
| Gene Sequence |
| Protein sequence |
