Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034272.t1 | XP_003604140.1 | 95 | 634 | 22 | 3 | 1 | 628 | 1 | 630 | 0.00E+00 | 1107.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034272.t1 | O04130 | 76.1 | 624 | 136 | 4 | 16 | 628 | 3 | 624 | 3.0e-257 | 889.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034272.t1 | G7JVK0 | 95.0 | 634 | 22 | 3 | 1 | 628 | 1 | 630 | 0.0e+00 | 1107.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029581 | MS.gene034272 | PPI |
| MS.gene026951 | MS.gene034272 | PPI |
| MS.gene71690 | MS.gene034272 | PPI |
| MS.gene34189 | MS.gene034272 | PPI |
| MS.gene064936 | MS.gene034272 | PPI |
| MS.gene82938 | MS.gene034272 | PPI |
| MS.gene64242 | MS.gene034272 | PPI |
| MS.gene026953 | MS.gene034272 | PPI |
| MS.gene92996 | MS.gene034272 | PPI |
| MS.gene073953 | MS.gene034272 | PPI |
| MS.gene065682 | MS.gene034272 | PPI |
| MS.gene53578 | MS.gene034272 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034272.t1 | MTR_4g005880 | 96.530 | 634 | 12 | 3 | 1 | 628 | 1 | 630 | 0.0 | 1225 |
| MS.gene034272.t1 | MTR_1g107480 | 77.939 | 553 | 122 | 0 | 76 | 628 | 45 | 597 | 0.0 | 902 |
| MS.gene034272.t1 | MTR_1g112510 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 2.57e-32 | 129 |
| MS.gene034272.t1 | MTR_3g005970 | 31.890 | 254 | 153 | 5 | 149 | 385 | 117 | 367 | 3.13e-30 | 123 |
| MS.gene034272.t1 | MTR_4g013100 | 29.412 | 255 | 171 | 4 | 149 | 402 | 68 | 314 | 6.97e-29 | 117 |
| MS.gene034272.t1 | MTR_4g013090 | 29.183 | 257 | 167 | 5 | 150 | 402 | 68 | 313 | 7.79e-28 | 114 |
| MS.gene034272.t1 | MTR_4g012960 | 27.907 | 258 | 172 | 4 | 149 | 406 | 67 | 310 | 1.14e-26 | 111 |
| MS.gene034272.t1 | MTR_6g007170 | 30.081 | 246 | 168 | 3 | 150 | 391 | 122 | 367 | 6.13e-26 | 110 |
| MS.gene034272.t1 | MTR_8g033390 | 29.811 | 265 | 167 | 6 | 150 | 409 | 76 | 326 | 3.58e-23 | 101 |
| MS.gene034272.t1 | MTR_4g013135 | 31.154 | 260 | 164 | 6 | 149 | 406 | 67 | 313 | 5.59e-22 | 97.4 |
| MS.gene034272.t1 | MTR_2g101840 | 29.885 | 261 | 161 | 7 | 150 | 402 | 68 | 314 | 6.76e-20 | 91.3 |
| MS.gene034272.t1 | MTR_6g007175 | 27.347 | 245 | 157 | 4 | 150 | 391 | 91 | 317 | 1.25e-19 | 90.9 |
| MS.gene034272.t1 | MTR_8g033400 | 28.405 | 257 | 171 | 6 | 125 | 376 | 63 | 311 | 3.99e-19 | 89.4 |
| MS.gene034272.t1 | MTR_8g033410 | 25.670 | 261 | 173 | 6 | 150 | 404 | 79 | 324 | 1.33e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034272.t1 | AT1G17745 | 75.962 | 624 | 137 | 4 | 16 | 628 | 3 | 624 | 0.0 | 957 |
| MS.gene034272.t1 | AT1G17745 | 72.657 | 651 | 138 | 6 | 16 | 628 | 3 | 651 | 0.0 | 937 |
| MS.gene034272.t1 | AT4G34200 | 77.034 | 553 | 127 | 0 | 76 | 628 | 51 | 603 | 0.0 | 892 |
| MS.gene034272.t1 | AT3G19480 | 76.427 | 543 | 128 | 0 | 86 | 628 | 46 | 588 | 0.0 | 869 |
| MS.gene034272.t1 | AT1G68010 | 34.564 | 298 | 172 | 7 | 115 | 390 | 50 | 346 | 1.13e-31 | 127 |
| MS.gene034272.t1 | AT1G68010 | 34.737 | 285 | 163 | 7 | 115 | 377 | 50 | 333 | 7.09e-31 | 124 |
| MS.gene034272.t1 | AT1G68010 | 34.783 | 299 | 171 | 8 | 115 | 390 | 50 | 347 | 3.52e-30 | 123 |
| MS.gene034272.t1 | AT1G79870 | 30.980 | 255 | 165 | 6 | 150 | 402 | 68 | 313 | 1.86e-27 | 113 |
| MS.gene034272.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 112 | 333 | 4.08e-27 | 114 |
| MS.gene034272.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 100 | 321 | 4.51e-27 | 113 |
| MS.gene034272.t1 | AT5G14780 | 31.532 | 222 | 148 | 3 | 156 | 373 | 126 | 347 | 9.65e-27 | 113 |
| MS.gene034272.t1 | AT1G12550 | 29.352 | 293 | 186 | 8 | 117 | 404 | 43 | 319 | 1.33e-26 | 111 |
| MS.gene034272.t1 | AT1G72190 | 30.380 | 237 | 154 | 4 | 150 | 377 | 116 | 350 | 3.48e-26 | 111 |
| MS.gene034272.t1 | AT2G45630 | 28.179 | 291 | 193 | 8 | 117 | 404 | 59 | 336 | 2.68e-22 | 99.0 |
| MS.gene034272.t1 | AT1G79870 | 29.528 | 254 | 151 | 6 | 150 | 402 | 68 | 294 | 6.80e-22 | 97.1 |
Find 133 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCAAGAGCTTCCTTATT+TGG | 0.155413 | 4.2:+93380924 | None:intergenic |
| TGATACAGCACTTGCGAATT+TGG | 0.169233 | 4.2:+93381196 | None:intergenic |
| CTACAAGCTGCTACTGAATT+TGG | 0.182846 | 4.2:-93383486 | MS.gene034272:CDS |
| AAAACAAACCTGTGCTTCTT+TGG | 0.221839 | 4.2:+93381993 | None:intergenic |
| TTCCTTAACTCCAACACTTT+TGG | 0.245786 | 4.2:-93383891 | MS.gene034272:CDS |
| TGGGAAAACATTAGCAATAA+TGG | 0.251279 | 4.2:-93382780 | MS.gene034272:CDS |
| CTTACATGTGTGGGATCTTT+TGG | 0.261096 | 4.2:-93381122 | MS.gene034272:CDS |
| CCACATTGGATATTTGTATC+TGG | 0.271958 | 4.2:+93381222 | None:intergenic |
| CATGTACCATACCGGCTTTA+AGG | 0.285448 | 4.2:+93383358 | None:intergenic |
| ATCTTCTTGCATAGGTCTTC+TGG | 0.285848 | 4.2:+93383630 | None:intergenic |
| TTGCACTAACTTACTGTCTT+TGG | 0.289295 | 4.2:+93382056 | None:intergenic |
| ACATTAGCAATAATGGGATT+TGG | 0.308937 | 4.2:-93382773 | MS.gene034272:CDS |
| ATGAGAGAGTTTAATGTTGT+TGG | 0.329026 | 4.2:+93383860 | None:intergenic |
| AAGGAAGCTCTTGAGAATAT+TGG | 0.341193 | 4.2:-93380918 | MS.gene034272:CDS |
| GGTAAAGTCGGAAACATATT+AGG | 0.343317 | 4.2:-93381035 | MS.gene034272:CDS |
| TCACCAGGTATTATCAGAAT+TGG | 0.344756 | 4.2:-93381531 | MS.gene034272:intron |
| GGGAAAACATTAGCAATAAT+GGG | 0.345954 | 4.2:-93382779 | MS.gene034272:CDS |
| TTGACAATTGTGTTTGATAT+TGG | 0.351660 | 4.2:+93381344 | None:intergenic |
| TTCCAAAAGTGTTGGAGTTA+AGG | 0.352126 | 4.2:+93383889 | None:intergenic |
| GCGTAGGAAGAAAGCGCTTA+TGG | 0.355828 | 4.2:-93380967 | MS.gene034272:CDS |
| GTTAAGGAATGAGAGATTAG+AGG | 0.361871 | 4.2:+93383905 | None:intergenic |
| TTGAAAACTTTGTTAGTAGT+TGG | 0.364330 | 4.2:+93382581 | None:intergenic |
| GCCTGCTTCTCCGAGTTTCT+CGG | 0.380012 | 4.2:+93383704 | None:intergenic |
| CGTCGATGAAGAGCCAAATA+AGG | 0.383184 | 4.2:-93380937 | MS.gene034272:CDS |
| GCTCTATCAGCTGGAGCATA+AGG | 0.392374 | 4.2:+93382686 | None:intergenic |
| ATGTACCATACCGGCTTTAA+GGG | 0.400835 | 4.2:+93383359 | None:intergenic |
| GGTGTGGATGTGAGCTTAGA+AGG | 0.404203 | 4.2:-93381101 | MS.gene034272:CDS |
| AAAGGAAAGTTGAAAGTTGT+TGG | 0.405100 | 4.2:-93383540 | MS.gene034272:CDS |
| GTCTAGGTCATCGGGACCCC+TGG | 0.409158 | 4.2:+93381409 | None:intergenic |
| GATTACATCGCAAAGCAAAA+AGG | 0.410558 | 4.2:-93381308 | MS.gene034272:CDS |
| CAAGTATGTTGGAGTGTCTA+TGG | 0.411120 | 4.2:-93382804 | MS.gene034272:CDS |
| ATAATGGGATTTGGAAAAGT+TGG | 0.416575 | 4.2:-93382764 | MS.gene034272:CDS |
| ACTGATCAGCCTGGGATGAT+TGG | 0.420709 | 4.2:-93381056 | MS.gene034272:CDS |
| TTAGTCAAAGCTCTTGATAG+TGG | 0.425387 | 4.2:-93382479 | MS.gene034272:CDS |
| AACCTGTGCTTCTTTGGTGC+TGG | 0.432833 | 4.2:+93381999 | None:intergenic |
| TTGGTTTCAGAAGAGAAGAT+AGG | 0.433144 | 4.2:+93383939 | None:intergenic |
| GCAAGGCGTGCAAAAGGATT+AGG | 0.435231 | 4.2:-93382731 | MS.gene034272:CDS |
| GATTGCTCTTCTTGCTGCTA+TGG | 0.439120 | 4.2:-93383409 | MS.gene034272:CDS |
| CGATGTAATCAGCATTTACA+AGG | 0.440577 | 4.2:+93381321 | None:intergenic |
| ATTGACGGAAAAGTGAAGTA+TGG | 0.441680 | 4.2:-93381155 | MS.gene034272:CDS |
| AACAACAGAAACAACGTTGT+TGG | 0.441735 | 4.2:+93383761 | None:intergenic |
| AAGAAAGCGCTTATGGCTAT+TGG | 0.442305 | 4.2:-93380960 | MS.gene034272:CDS |
| GTGATTGCTACTCCTCATCT+TGG | 0.451139 | 4.2:-93382024 | MS.gene034272:CDS |
| TCCGAGAAACTCGGAGAAGC+AGG | 0.463753 | 4.2:-93383705 | MS.gene034272:CDS |
| TTCTCAGCCAGCACAACATA+TGG | 0.465579 | 4.2:+93381506 | None:intergenic |
| TGGAGCTGTGCCTGCTATTG+AGG | 0.472247 | 4.2:-93380898 | MS.gene034272:CDS |
| TATGGCTCGTAATGTTTCTC+AGG | 0.473207 | 4.2:-93383391 | MS.gene034272:CDS |
| TGTATCTGGATTGACTCAAC+AGG | 0.483012 | 4.2:+93381236 | None:intergenic |
| TTAGCTGTGCAGTTGGTATC+CGG | 0.483277 | 4.2:-93381473 | MS.gene034272:CDS |
| AGATTGGATTCCACTTCCTC+CGG | 0.486443 | 4.2:+93381454 | None:intergenic |
| GAAGTGGCAAGGCGTGCAAA+AGG | 0.492552 | 4.2:-93382737 | MS.gene034272:CDS |
| AACTGCTGTCAATGCTCCTA+TGG | 0.495186 | 4.2:-93381812 | MS.gene034272:CDS |
| AGTGGTTTACCGATCGGCCA+GGG | 0.499241 | 4.2:-93381426 | MS.gene034272:CDS |
| ACTAACTTACTGTCTTTGGC+TGG | 0.501929 | 4.2:+93382060 | None:intergenic |
| TTGAAAGTTGTTGGTAGAGC+TGG | 0.503758 | 4.2:-93383531 | MS.gene034272:CDS |
| GCTGTTGTTGGTGCATTGAA+TGG | 0.504053 | 4.2:-93381847 | MS.gene034272:CDS |
| GAAATAGCAGAGGCTGTTGT+TGG | 0.504211 | 4.2:-93381859 | MS.gene034272:CDS |
| ACAAGACAAGTGTTTGAAGC+AGG | 0.504544 | 4.2:-93383564 | MS.gene034272:CDS |
| TGATAGTGGAATTGTTGCTC+AGG | 0.505410 | 4.2:-93382465 | MS.gene034272:intron |
| TGCTCCTATGGTTGCTCCTG+AGG | 0.505857 | 4.2:-93381800 | MS.gene034272:intron |
| ATTGGCTCCATATGTTGTGC+TGG | 0.505952 | 4.2:-93381513 | MS.gene034272:CDS |
| AATTGAGTTGGTACAAGAAG+AGG | 0.507359 | 4.2:+93383971 | None:intergenic |
| ACTATTGCTGCTGCTGAACA+TGG | 0.507722 | 4.2:-93383432 | MS.gene034272:CDS |
| CAAAAGATCCCACACATGTA+AGG | 0.508676 | 4.2:+93381123 | None:intergenic |
| AAGTCTGGTGTCTAGGTCAT+CGG | 0.511273 | 4.2:+93381400 | None:intergenic |
| AAGTGGTTTACCGATCGGCC+AGG | 0.511493 | 4.2:-93381427 | MS.gene034272:CDS |
| CTTCGAGCCATGATCACAAA+AGG | 0.512301 | 4.2:-93381377 | MS.gene034272:CDS |
| CAGTTGGTATCCGGAGGAAG+TGG | 0.513484 | 4.2:-93381464 | MS.gene034272:CDS |
| CTCGAAGAAGTCTGGTGTCT+AGG | 0.515153 | 4.2:+93381393 | None:intergenic |
| GATCATGGCTCGAAGAAGTC+TGG | 0.515479 | 4.2:+93381385 | None:intergenic |
| AGTCTGGTGTCTAGGTCATC+GGG | 0.515480 | 4.2:+93381401 | None:intergenic |
| TTTAAGACAATTAGGACATG+TGG | 0.518255 | 4.2:-93383673 | MS.gene034272:CDS |
| TGCGAATTTGGACTCCACAT+TGG | 0.521056 | 4.2:+93381208 | None:intergenic |
| CTCTATCAGCTGGAGCATAA+GGG | 0.521140 | 4.2:+93382687 | None:intergenic |
| CTCTTTCCTCGCTTATGCGA+AGG | 0.522585 | 4.2:+93381285 | None:intergenic |
| ATTGACTCAACAGGTAGCTC+AGG | 0.525036 | 4.2:+93381245 | None:intergenic |
| TGCAGACAGACTGATCAGCC+TGG | 0.528856 | 4.2:-93381065 | MS.gene034272:CDS |
| AACACAAACTCCTCAATAGC+AGG | 0.528948 | 4.2:+93380888 | None:intergenic |
| TTGGTGCTGGCTCCAAGATG+AGG | 0.530869 | 4.2:+93382012 | None:intergenic |
| TGGAATCCAATCTGTAAAAG+TGG | 0.532831 | 4.2:-93381444 | MS.gene034272:CDS |
| TTGTTGGTAGAGCTGGTGTT+GGG | 0.537332 | 4.2:-93383524 | MS.gene034272:CDS |
| TTTGACTCAATAGGAGGGTG+TGG | 0.537514 | 4.2:-93381887 | MS.gene034272:intron |
| AACTTACTGTCTTTGGCTGG+AGG | 0.538388 | 4.2:+93382063 | None:intergenic |
| TTGTTAGTAGTTGGAGTGAG+AGG | 0.541743 | 4.2:+93382590 | None:intergenic |
| TCAGAAGAGAAGATAGGTGA+AGG | 0.543290 | 4.2:+93383945 | None:intergenic |
| ACAGCACGTGCTCTATCAGC+TGG | 0.543522 | 4.2:+93382677 | None:intergenic |
| TGGAAAAGTTGGATCTGAAG+TGG | 0.544222 | 4.2:-93382753 | MS.gene034272:CDS |
| AGCCAGCACCAAAGAAGCAC+AGG | 0.545917 | 4.2:-93382001 | MS.gene034272:intron |
| TTTACCTCAGGAGCAACCAT+AGG | 0.548169 | 4.2:+93381796 | None:intergenic |
| GCAAGTGCTGTATCAGAGAC+TGG | 0.549715 | 4.2:-93381188 | MS.gene034272:CDS |
| TTCTCGGAGACCAAGATCGT+TGG | 0.552120 | 4.2:+93383720 | None:intergenic |
| CATCGGGACCCCTGGCCGAT+CGG | 0.557463 | 4.2:+93381417 | None:intergenic |
| GTTGTTGGTAGAGCTGGTGT+TGG | 0.558071 | 4.2:-93383525 | MS.gene034272:CDS |
| GTGTGGATGTGAGCTTAGAA+GGG | 0.562427 | 4.2:-93381100 | MS.gene034272:CDS |
| CCGACTTTACCAATCATCCC+AGG | 0.564497 | 4.2:+93381047 | None:intergenic |
| TGCTGGCTGAGAAGCTAGGA+AGG | 0.566544 | 4.2:-93381496 | MS.gene034272:CDS |
| GCTGATAGAGCACGTGCTGT+TGG | 0.568204 | 4.2:-93382674 | MS.gene034272:CDS |
| ATCTTGGTCTCCGAGAAACT+CGG | 0.570682 | 4.2:-93383714 | MS.gene034272:CDS |
| ATGTTGGAGTGTCTATGGTT+GGG | 0.571426 | 4.2:-93382799 | MS.gene034272:CDS |
| GGTAATGATTCCAAAAGTGT+TGG | 0.574616 | 4.2:+93383881 | None:intergenic |
| AGGAAGGTTAGCTGTGCAGT+TGG | 0.575316 | 4.2:-93381480 | MS.gene034272:CDS |
| TGGCTGAGGAACAAGTATGT+TGG | 0.577015 | 4.2:-93382815 | MS.gene034272:CDS |
| AGCTTGAGATCTTCTTGCAT+AGG | 0.577862 | 4.2:+93383622 | None:intergenic |
| ACTGGTCAGATAAGCATTGA+CGG | 0.579892 | 4.2:-93381170 | MS.gene034272:CDS |
| CAAGTGTTTGAAGCAGGGAA+AGG | 0.581477 | 4.2:-93383558 | MS.gene034272:CDS |
| ATCATCAATGTTGCTAGAGG+TGG | 0.581813 | 4.2:-93382521 | MS.gene034272:CDS |
| AGGTGAAGGAAGAATTGAGT+TGG | 0.583715 | 4.2:+93383959 | None:intergenic |
| TATGTTGGAGTGTCTATGGT+TGG | 0.584348 | 4.2:-93382800 | MS.gene034272:CDS |
| TGTAAAAGTGGTTTACCGAT+CGG | 0.589128 | 4.2:-93381432 | MS.gene034272:CDS |
| GCTGATGCTTCCCTTAAAGC+CGG | 0.593057 | 4.2:-93383369 | MS.gene034272:intron |
| CCTGGGATGATTGGTAAAGT+CGG | 0.595667 | 4.2:-93381047 | MS.gene034272:CDS |
| GCAGCAATAGTATTAGCAGT+AGG | 0.600020 | 4.2:+93383444 | None:intergenic |
| ACACCACACCTTACATGTGT+GGG | 0.601870 | 4.2:-93381131 | MS.gene034272:CDS |
| TACACCACACCTTACATGTG+TGG | 0.602905 | 4.2:-93381132 | MS.gene034272:CDS |
| CTATTGCTGCTGCTGAACAT+GGG | 0.618691 | 4.2:-93383431 | MS.gene034272:CDS |
| CAAGACAAGTGTTTGAAGCA+GGG | 0.623927 | 4.2:-93383563 | MS.gene034272:CDS |
| TGGTGTTGGGATTGATAATG+TGG | 0.634025 | 4.2:-93383511 | MS.gene034272:CDS |
| GTTGTGCTGGCTGAGAAGCT+AGG | 0.640220 | 4.2:-93381500 | MS.gene034272:CDS |
| CATAAGCGAGGAAAGAGTAG+TGG | 0.646950 | 4.2:-93381279 | MS.gene034272:CDS |
| AAGTTGGATCTGAAGTGGCA+AGG | 0.647081 | 4.2:-93382748 | MS.gene034272:CDS |
| CCAGATACAAATATCCAATG+TGG | 0.650082 | 4.2:-93381222 | MS.gene034272:CDS |
| GCAGACAGACTGATCAGCCT+GGG | 0.652171 | 4.2:-93381064 | MS.gene034272:CDS |
| GTGGTTTACCGATCGGCCAG+GGG | 0.652751 | 4.2:-93381425 | MS.gene034272:CDS |
| AAAAGGCCTTCGCATAAGCG+AGG | 0.668434 | 4.2:-93381291 | MS.gene034272:CDS |
| GATCCCACACATGTAAGGTG+TGG | 0.673309 | 4.2:+93381128 | None:intergenic |
| GCGTCGGAAGAACATCGCGT+AGG | 0.678508 | 4.2:-93380983 | MS.gene034272:CDS |
| AATGTGAGCTTTATGAGCGT+CGG | 0.682198 | 4.2:-93380999 | MS.gene034272:CDS |
| GCTGTGCAGTTGGTATCCGG+AGG | 0.685286 | 4.2:-93381470 | MS.gene034272:CDS |
| TGTGGCTATTGAAATAGCAG+AGG | 0.685958 | 4.2:-93381869 | MS.gene034272:CDS |
| AGAATCATCAATGTTGCTAG+AGG | 0.702837 | 4.2:-93382524 | MS.gene034272:CDS |
| GATGCTTTGATTGTGAGAAG+CGG | 0.715751 | 4.2:-93383597 | MS.gene034272:CDS |
| AGCTCTTGATGTGTTCACTG+AGG | 0.735803 | 4.2:-93382088 | MS.gene034272:CDS |
| GTGAAGTGAGATGAAATCAG+CGG | 0.758782 | 4.2:+93382616 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGTTTAATAGTATTAG+TGG | - | chr4.2:93381578-93381597 | MS.gene034272:intron | 15.0% |
| !!! | AGGTTAGTTTTTAATTTATA+CGG | - | chr4.2:93381649-93381668 | MS.gene034272:intron | 15.0% |
| !!! | TCTTGTTTGAAATATATTTA+AGG | - | chr4.2:93381815-93381834 | MS.gene034272:CDS | 15.0% |
| !! | AAATAGTAAATGGTAATTCA+AGG | + | chr4.2:93382532-93382551 | None:intergenic | 20.0% |
| !! | AATTGATGAGAAAAAAAACT+TGG | + | chr4.2:93382947-93382966 | None:intergenic | 20.0% |
| !! | GATAGTATAATAGTAATTCA+AGG | + | chr4.2:93382442-93382461 | None:intergenic | 20.0% |
| !! | TGTAAAAACACACATATTAT+AGG | + | chr4.2:93381964-93381983 | None:intergenic | 20.0% |
| !!! | AAATAGAAATGTCATTTGAA+TGG | + | chr4.2:93382725-93382744 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTGTTTGAATG+TGG | - | chr4.2:93382735-93382754 | MS.gene034272:CDS | 20.0% |
| !!! | TACACAAAAAGTACATTTTT+AGG | - | chr4.2:93381899-93381918 | MS.gene034272:intron | 20.0% |
| !!! | TGAATTACCATTTACTATTT+TGG | - | chr4.2:93382532-93382551 | MS.gene034272:CDS | 20.0% |
| !!! | TTACAAGTTTTAAGACAATT+AGG | - | chr4.2:93381172-93381191 | MS.gene034272:CDS | 20.0% |
| ! | AACATGTTAATTGAAGTAAG+AGG | + | chr4.2:93382419-93382438 | None:intergenic | 25.0% |
| ! | AATGTTAGTAATTGGTTGTT+AGG | - | chr4.2:93381629-93381648 | MS.gene034272:intron | 25.0% |
| ! | AGAAAATTATGTGAGCTAAA+AGG | + | chr4.2:93382922-93382941 | None:intergenic | 25.0% |
| ! | ATGGAAATTAAACTATGCTT+TGG | - | chr4.2:93383140-93383159 | MS.gene034272:intron | 25.0% |
| ! | GAAAATTATGTGAGCTAAAA+GGG | + | chr4.2:93382921-93382940 | None:intergenic | 25.0% |
| ! | TAACGACAAATGTTAGTAAT+TGG | - | chr4.2:93381621-93381640 | MS.gene034272:intron | 25.0% |
| ! | TGGAAATTAAACTATGCTTT+GGG | - | chr4.2:93383141-93383160 | MS.gene034272:intron | 25.0% |
| ! | TTGAAAACTTTGTTAGTAGT+TGG | + | chr4.2:93382275-93382294 | None:intergenic | 25.0% |
| ! | TTGACAATTGTGTTTGATAT+TGG | + | chr4.2:93383512-93383531 | None:intergenic | 25.0% |
| !! | AAAGCATAGTTTAATTTCCA+TGG | + | chr4.2:93383141-93383160 | None:intergenic | 25.0% |
| !! | ATTAGAACTAGTTTAGACAT+AGG | - | chr4.2:93383208-93383227 | MS.gene034272:intron | 25.0% |
| !! | TGATAATTTTTGCAGGAAAA+TGG | - | chr4.2:93382018-93382037 | MS.gene034272:CDS | 25.0% |
| !!! | ATTAGAGGATTTTGAAGATT+TGG | + | chr4.2:93380936-93380955 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTAAATTGCAGTT+GGG | - | chr4.2:93381762-93381781 | MS.gene034272:intron | 25.0% |
| !!! | TTTGAGTTGTTTGTTTTGTT+TGG | + | chr4.2:93381072-93381091 | None:intergenic | 25.0% |
| AAAGGAAAGTTGAAAGTTGT+TGG | - | chr4.2:93381313-93381332 | MS.gene034272:CDS | 30.0% | |
| AAATGAAAAACCAACGATCT+TGG | - | chr4.2:93381123-93381142 | MS.gene034272:CDS | 30.0% | |
| AAGCAAAAAAAGAACAATGC+AGG | + | chr4.2:93383270-93383289 | None:intergenic | 30.0% | |
| AGCATACTAATGTTACAATG+TGG | + | chr4.2:93383090-93383109 | None:intergenic | 30.0% | |
| ATGAGAGAGTTTAATGTTGT+TGG | + | chr4.2:93380996-93381015 | None:intergenic | 30.0% | |
| GAAGAAGAAAAAATGCAAGT+AGG | + | chr4.2:93382896-93382915 | None:intergenic | 30.0% | |
| GCGATTTCCAAAATAGTAAA+TGG | + | chr4.2:93382542-93382561 | None:intergenic | 30.0% | |
| GGGAAAACATTAGCAATAAT+GGG | - | chr4.2:93382074-93382093 | MS.gene034272:CDS | 30.0% | |
| TAATTGTTTGCAATTTCACC+AGG | - | chr4.2:93383307-93383326 | MS.gene034272:intron | 30.0% | |
| TCAAGGAACATGTAAACTAT+AGG | + | chr4.2:93382515-93382534 | None:intergenic | 30.0% | |
| TGGGAAAACATTAGCAATAA+TGG | - | chr4.2:93382073-93382092 | MS.gene034272:CDS | 30.0% | |
| ! | AATAATGCCTTTTGTGATCA+TGG | + | chr4.2:93383486-93383505 | None:intergenic | 30.0% |
| ! | ACATTAGCAATAATGGGATT+TGG | - | chr4.2:93382080-93382099 | MS.gene034272:CDS | 30.0% |
| ! | ACTACTATGAGTATTTGTTG+AGG | - | chr4.2:93381983-93382002 | MS.gene034272:intron | 30.0% |
| ! | ACTTTTGCTAAGATGAAGAA+GGG | - | chr4.2:93382302-93382321 | MS.gene034272:intron | 30.0% |
| ! | ATAATGGGATTTGGAAAAGT+TGG | - | chr4.2:93382089-93382108 | MS.gene034272:CDS | 30.0% |
| ! | CCAACTGCAATTTAAAACTT+TGG | + | chr4.2:93381764-93381783 | None:intergenic | 30.0% |
| ! | TACTTTTGCTAAGATGAAGA+AGG | - | chr4.2:93382301-93382320 | MS.gene034272:intron | 30.0% |
| ! | TTTAAGACAATTAGGACATG+TGG | - | chr4.2:93381180-93381199 | MS.gene034272:CDS | 30.0% |
| !!! | ATCAATTTTGACTCAATAGG+AGG | - | chr4.2:93382960-93382979 | MS.gene034272:intron | 30.0% |
| !!! | CCAAAGTTTTAAATTGCAGT+TGG | - | chr4.2:93381761-93381780 | MS.gene034272:intron | 30.0% |
| !!! | CTCATCAATTTTGACTCAAT+AGG | - | chr4.2:93382957-93382976 | MS.gene034272:intron | 30.0% |
| !!! | GAGATGTTGATAATTTTTGC+AGG | - | chr4.2:93382011-93382030 | MS.gene034272:CDS | 30.0% |
| !!! | TCAATTTTGACTCAATAGGA+GGG | - | chr4.2:93382961-93382980 | MS.gene034272:intron | 30.0% |
| !!! | TGTTTGTTTTGTTTGGTCAA+CGG | + | chr4.2:93381065-93381084 | None:intergenic | 30.0% |
| AAAACAAACCTGTGCTTCTT+TGG | + | chr4.2:93382863-93382882 | None:intergenic | 35.0% | |
| AACAACAGAAACAACGTTGT+TGG | + | chr4.2:93381095-93381114 | None:intergenic | 35.0% | |
| AAGGAAGCTCTTGAGAATAT+TGG | - | chr4.2:93383935-93383954 | MS.gene034272:CDS | 35.0% | |
| AGAATCATCAATGTTGCTAG+AGG | - | chr4.2:93382329-93382348 | MS.gene034272:intron | 35.0% | |
| AGTTTAGACATAGGTCACAT+TGG | - | chr4.2:93383217-93383236 | MS.gene034272:intron | 35.0% | |
| ATCATGAACATGTACCATAC+CGG | + | chr4.2:93381506-93381525 | None:intergenic | 35.0% | |
| ATTGACGGAAAAGTGAAGTA+TGG | - | chr4.2:93383698-93383717 | MS.gene034272:CDS | 35.0% | |
| CCACATTGGATATTTGTATC+TGG | + | chr4.2:93383634-93383653 | None:intergenic | 35.0% | |
| CCAGATACAAATATCCAATG+TGG | - | chr4.2:93383631-93383650 | MS.gene034272:CDS | 35.0% | |
| CGATGTAATCAGCATTTACA+AGG | + | chr4.2:93383535-93383554 | None:intergenic | 35.0% | |
| GATCAACACAATTCAGTGAA+TGG | + | chr4.2:93382682-93382701 | None:intergenic | 35.0% | |
| GATTACATCGCAAAGCAAAA+AGG | - | chr4.2:93383545-93383564 | MS.gene034272:CDS | 35.0% | |
| GATTGACGTATATTCAACGT+TGG | - | chr4.2:93381693-93381712 | MS.gene034272:intron | 35.0% | |
| GGTAAAGTCGGAAACATATT+AGG | - | chr4.2:93383818-93383837 | MS.gene034272:CDS | 35.0% | |
| GTTAAGGAATGAGAGATTAG+AGG | + | chr4.2:93380951-93380970 | None:intergenic | 35.0% | |
| TCACCAGGTATTATCAGAAT+TGG | - | chr4.2:93383322-93383341 | MS.gene034272:intron | 35.0% | |
| TGGAATCCAATCTGTAAAAG+TGG | - | chr4.2:93383409-93383428 | MS.gene034272:CDS | 35.0% | |
| TGTAAAAGTGGTTTACCGAT+CGG | - | chr4.2:93383421-93383440 | MS.gene034272:CDS | 35.0% | |
| TTAGTCAAAGCTCTTGATAG+TGG | - | chr4.2:93382374-93382393 | MS.gene034272:intron | 35.0% | |
| TTCAAACAAGAGATCTAGCA+AGG | + | chr4.2:93381806-93381825 | None:intergenic | 35.0% | |
| TTCTCAAGAGCTTCCTTATT+TGG | + | chr4.2:93383932-93383951 | None:intergenic | 35.0% | |
| TTGCACTAACTTACTGTCTT+TGG | + | chr4.2:93382800-93382819 | None:intergenic | 35.0% | |
| TTGGTTTCAGAAGAGAAGAT+AGG | + | chr4.2:93380917-93380936 | None:intergenic | 35.0% | |
| ! | GCATAGTTTAATTTCCATGG+AGG | + | chr4.2:93383138-93383157 | None:intergenic | 35.0% |
| ! | GGTAATGATTCCAAAAGTGT+TGG | + | chr4.2:93380975-93380994 | None:intergenic | 35.0% |
| ! | TTCCTTAACTCCAACACTTT+TGG | - | chr4.2:93380962-93380981 | MS.gene034272:CDS | 35.0% |
| !! | AATTGAGTTGGTACAAGAAG+AGG | + | chr4.2:93380885-93380904 | None:intergenic | 35.0% |
| !! | ATTTTGTTTGAATGTGGAGC+AGG | - | chr4.2:93382741-93382760 | MS.gene034272:CDS | 35.0% |
| !! | GGTAAACCACTTTTACAGAT+TGG | + | chr4.2:93383418-93383437 | None:intergenic | 35.0% |
| !! | TTCCAAAAGTGTTGGAGTTA+AGG | + | chr4.2:93380967-93380986 | None:intergenic | 35.0% |
| !!! | TGTGGTTGTTTTTTTACCTC+AGG | + | chr4.2:93383072-93383091 | None:intergenic | 35.0% |
| AACACAAACTCCTCAATAGC+AGG | + | chr4.2:93383968-93383987 | None:intergenic | 40.0% | |
| ACTAACTTACTGTCTTTGGC+TGG | + | chr4.2:93382796-93382815 | None:intergenic | 40.0% | |
| AGCTTGAGATCTTCTTGCAT+AGG | + | chr4.2:93381234-93381253 | None:intergenic | 40.0% | |
| AGGTGAAGGAAGAATTGAGT+TGG | + | chr4.2:93380897-93380916 | None:intergenic | 40.0% | |
| ATCATCAATGTTGCTAGAGG+TGG | - | chr4.2:93382332-93382351 | MS.gene034272:intron | 40.0% | |
| ATCTTCTTGCATAGGTCTTC+TGG | + | chr4.2:93381226-93381245 | None:intergenic | 40.0% | |
| CAAAAGATCCCACACATGTA+AGG | + | chr4.2:93383733-93383752 | None:intergenic | 40.0% | |
| CTACAAGCTGCTACTGAATT+TGG | - | chr4.2:93381367-93381386 | MS.gene034272:CDS | 40.0% | |
| CTAGCAATGTTCAACTCGTT+TGG | - | chr4.2:93382468-93382487 | MS.gene034272:CDS | 40.0% | |
| GAGCCAATTCTGATAATACC+TGG | + | chr4.2:93383328-93383347 | None:intergenic | 40.0% | |
| GATGCTTTGATTGTGAGAAG+CGG | - | chr4.2:93381256-93381275 | MS.gene034272:CDS | 40.0% | |
| GCAGCAATAGTATTAGCAGT+AGG | + | chr4.2:93381412-93381431 | None:intergenic | 40.0% | |
| GTGAAGTGAGATGAAATCAG+CGG | + | chr4.2:93382240-93382259 | None:intergenic | 40.0% | |
| TATGGCTCGTAATGTTTCTC+AGG | - | chr4.2:93381462-93381481 | MS.gene034272:CDS | 40.0% | |
| TCAGAAGAGAAGATAGGTGA+AGG | + | chr4.2:93380911-93380930 | None:intergenic | 40.0% | |
| TGATACAGCACTTGCGAATT+TGG | + | chr4.2:93383660-93383679 | None:intergenic | 40.0% | |
| TGGAAAAGTTGGATCTGAAG+TGG | - | chr4.2:93382100-93382119 | MS.gene034272:intron | 40.0% | |
| TGGAAATCGCAATTGCATAG+TGG | - | chr4.2:93382552-93382571 | MS.gene034272:CDS | 40.0% | |
| TGTGGCTATTGAAATAGCAG+AGG | - | chr4.2:93382984-93383003 | MS.gene034272:intron | 40.0% | |
| TTCAACTCGTTTGGAAATCG+TGG | - | chr4.2:93382477-93382496 | MS.gene034272:CDS | 40.0% | |
| TTGTTAGTAGTTGGAGTGAG+AGG | + | chr4.2:93382266-93382285 | None:intergenic | 40.0% | |
| ! | AATGTGAGCTTTATGAGCGT+CGG | - | chr4.2:93383854-93383873 | MS.gene034272:CDS | 40.0% |
| ! | ACAAGACAAGTGTTTGAAGC+AGG | - | chr4.2:93381289-93381308 | MS.gene034272:CDS | 40.0% |
| ! | ATGTTGGAGTGTCTATGGTT+GGG | - | chr4.2:93382054-93382073 | MS.gene034272:CDS | 40.0% |
| ! | CAAGACAAGTGTTTGAAGCA+GGG | - | chr4.2:93381290-93381309 | MS.gene034272:CDS | 40.0% |
| ! | CAAGTATGTTGGAGTGTCTA+TGG | - | chr4.2:93382049-93382068 | MS.gene034272:CDS | 40.0% |
| ! | CTTACATGTGTGGGATCTTT+TGG | - | chr4.2:93383731-93383750 | MS.gene034272:CDS | 40.0% |
| ! | TATGTTGGAGTGTCTATGGT+TGG | - | chr4.2:93382053-93382072 | MS.gene034272:CDS | 40.0% |
| ! | TGTATCTGGATTGACTCAAC+AGG | + | chr4.2:93383620-93383639 | None:intergenic | 40.0% |
| ! | TTGAAAGTTGTTGGTAGAGC+TGG | - | chr4.2:93381322-93381341 | MS.gene034272:CDS | 40.0% |
| ! | TTTTTGCAGGAAAATGGCTG+AGG | - | chr4.2:93382024-93382043 | MS.gene034272:CDS | 40.0% |
| !! | AAGAAAGCGCTTATGGCTAT+TGG | - | chr4.2:93383893-93383912 | MS.gene034272:CDS | 40.0% |
| !! | ACTGGTCAGATAAGCATTGA+CGG | - | chr4.2:93383683-93383702 | MS.gene034272:CDS | 40.0% |
| !! | ATGTACCATACCGGCTTTAA+GGG | + | chr4.2:93381497-93381516 | None:intergenic | 40.0% |
| !! | CTCTCAACAACGTTGTTTTG+TGG | - | chr4.2:93381021-93381040 | MS.gene034272:CDS | 40.0% |
| !! | TGATAGTGGAATTGTTGCTC+AGG | - | chr4.2:93382388-93382407 | MS.gene034272:intron | 40.0% |
| !! | TGGTGTTGGGATTGATAATG+TGG | - | chr4.2:93381342-93381361 | MS.gene034272:CDS | 40.0% |
| AACTGCTGTCAATGCTCCTA+TGG | - | chr4.2:93383041-93383060 | MS.gene034272:intron | 45.0% | |
| AACTTACTGTCTTTGGCTGG+AGG | + | chr4.2:93382793-93382812 | None:intergenic | 45.0% | |
| AAGTCTGGTGTCTAGGTCAT+CGG | + | chr4.2:93383456-93383475 | None:intergenic | 45.0% | |
| ACACCACACCTTACATGTGT+GGG | - | chr4.2:93383722-93383741 | MS.gene034272:CDS | 45.0% | |
| ACTATTGCTGCTGCTGAACA+TGG | - | chr4.2:93381421-93381440 | MS.gene034272:CDS | 45.0% | |
| AGATTGGATTCCACTTCCTC+CGG | + | chr4.2:93383402-93383421 | None:intergenic | 45.0% | |
| AGCTCTTGATGTGTTCACTG+AGG | - | chr4.2:93382765-93382784 | MS.gene034272:CDS | 45.0% | |
| ATCTTGGTCTCCGAGAAACT+CGG | - | chr4.2:93381139-93381158 | MS.gene034272:CDS | 45.0% | |
| ATTTCCATGGAGGCTGACTA+TGG | + | chr4.2:93383128-93383147 | None:intergenic | 45.0% | |
| CACGAAGTCGCGATTAACAA+TGG | - | chr4.2:93382610-93382629 | MS.gene034272:CDS | 45.0% | |
| CATAAGCGAGGAAAGAGTAG+TGG | - | chr4.2:93383574-93383593 | MS.gene034272:CDS | 45.0% | |
| CCTGGGATGATTGGTAAAGT+CGG | - | chr4.2:93383806-93383825 | MS.gene034272:CDS | 45.0% | |
| CGTCGATGAAGAGCCAAATA+AGG | - | chr4.2:93383916-93383935 | MS.gene034272:CDS | 45.0% | |
| CTATTGCTGCTGCTGAACAT+GGG | - | chr4.2:93381422-93381441 | MS.gene034272:CDS | 45.0% | |
| CTCTATCAGCTGGAGCATAA+GGG | + | chr4.2:93382169-93382188 | None:intergenic | 45.0% | |
| CTTCGAGCCATGATCACAAA+AGG | - | chr4.2:93383476-93383495 | MS.gene034272:CDS | 45.0% | |
| GAAATAGCAGAGGCTGTTGT+TGG | - | chr4.2:93382994-93383013 | MS.gene034272:intron | 45.0% | |
| GATTGCTCTTCTTGCTGCTA+TGG | - | chr4.2:93381444-93381463 | MS.gene034272:CDS | 45.0% | |
| GCTGTTGTTGGTGCATTGAA+TGG | - | chr4.2:93383006-93383025 | MS.gene034272:intron | 45.0% | |
| GTGATTGCTACTCCTCATCT+TGG | - | chr4.2:93382829-93382848 | MS.gene034272:intron | 45.0% | |
| GTGTGGATGTGAGCTTAGAA+GGG | - | chr4.2:93383753-93383772 | MS.gene034272:CDS | 45.0% | |
| TACACCACACCTTACATGTG+TGG | - | chr4.2:93383721-93383740 | MS.gene034272:CDS | 45.0% | |
| TGCGAATTTGGACTCCACAT+TGG | + | chr4.2:93383648-93383667 | None:intergenic | 45.0% | |
| TGGCTGAGGAACAAGTATGT+TGG | - | chr4.2:93382038-93382057 | MS.gene034272:CDS | 45.0% | |
| TTCTCAGCCAGCACAACATA+TGG | + | chr4.2:93383350-93383369 | None:intergenic | 45.0% | |
| TTTACCTCAGGAGCAACCAT+AGG | + | chr4.2:93383060-93383079 | None:intergenic | 45.0% | |
| TTTGACTCAATAGGAGGGTG+TGG | - | chr4.2:93382966-93382985 | MS.gene034272:intron | 45.0% | |
| ! | AAGTTGGATCTGAAGTGGCA+AGG | - | chr4.2:93382105-93382124 | MS.gene034272:intron | 45.0% |
| ! | ATGTGTGGGATCTTTTGGTG+TGG | - | chr4.2:93383736-93383755 | MS.gene034272:CDS | 45.0% |
| ! | ATTGACTCAACAGGTAGCTC+AGG | + | chr4.2:93383611-93383630 | None:intergenic | 45.0% |
| ! | ATTGGCTCCATATGTTGTGC+TGG | - | chr4.2:93383340-93383359 | MS.gene034272:intron | 45.0% |
| ! | CAAGTGTTTGAAGCAGGGAA+AGG | - | chr4.2:93381295-93381314 | MS.gene034272:CDS | 45.0% |
| ! | TTAGCTGTGCAGTTGGTATC+CGG | - | chr4.2:93383380-93383399 | MS.gene034272:CDS | 45.0% |
| ! | TTGTTGGTAGAGCTGGTGTT+GGG | - | chr4.2:93381329-93381348 | MS.gene034272:CDS | 45.0% |
| !! | CATGTACCATACCGGCTTTA+AGG | + | chr4.2:93381498-93381517 | None:intergenic | 45.0% |
| AAAAGGCCTTCGCATAAGCG+AGG | - | chr4.2:93383562-93383581 | MS.gene034272:CDS | 50.0% | |
| AAGACCATAGTCAGCCTCCA+TGG | - | chr4.2:93383121-93383140 | MS.gene034272:intron | 50.0% | |
| ACTGATCAGCCTGGGATGAT+TGG | - | chr4.2:93383797-93383816 | MS.gene034272:CDS | 50.0% | |
| AGTCTGGTGTCTAGGTCATC+GGG | + | chr4.2:93383455-93383474 | None:intergenic | 50.0% | |
| CCGACTTTACCAATCATCCC+AGG | + | chr4.2:93383809-93383828 | None:intergenic | 50.0% | |
| CTCGAAGAAGTCTGGTGTCT+AGG | + | chr4.2:93383463-93383482 | None:intergenic | 50.0% | |
| CTCTTTCCTCGCTTATGCGA+AGG | + | chr4.2:93383571-93383590 | None:intergenic | 50.0% | |
| GATCATGGCTCGAAGAAGTC+TGG | + | chr4.2:93383471-93383490 | None:intergenic | 50.0% | |
| GATCCCACACATGTAAGGTG+TGG | + | chr4.2:93383728-93383747 | None:intergenic | 50.0% | |
| GCAAGGCGTGCAAAAGGATT+AGG | - | chr4.2:93382122-93382141 | MS.gene034272:intron | 50.0% | |
| GCTCTATCAGCTGGAGCATA+AGG | + | chr4.2:93382170-93382189 | None:intergenic | 50.0% | |
| GCTGATGCTTCCCTTAAAGC+CGG | - | chr4.2:93381484-93381503 | MS.gene034272:CDS | 50.0% | |
| GGTGTGGATGTGAGCTTAGA+AGG | - | chr4.2:93383752-93383771 | MS.gene034272:CDS | 50.0% | |
| TGCTTCCCTTAAAGCCGGTA+TGG | - | chr4.2:93381489-93381508 | MS.gene034272:CDS | 50.0% | |
| TTCTCGGAGACCAAGATCGT+TGG | + | chr4.2:93381136-93381155 | None:intergenic | 50.0% | |
| ! | AACCTGTGCTTCTTTGGTGC+TGG | + | chr4.2:93382857-93382876 | None:intergenic | 50.0% |
| ! | AGGAAGGTTAGCTGTGCAGT+TGG | - | chr4.2:93383373-93383392 | MS.gene034272:CDS | 50.0% |
| ! | GCAAGTGCTGTATCAGAGAC+TGG | - | chr4.2:93383665-93383684 | MS.gene034272:CDS | 50.0% |
| ! | GTTGTTGGTAGAGCTGGTGT+TGG | - | chr4.2:93381328-93381347 | MS.gene034272:CDS | 50.0% |
| !! | GCGTAGGAAGAAAGCGCTTA+TGG | - | chr4.2:93383886-93383905 | MS.gene034272:CDS | 50.0% |
| AAGTGGTTTACCGATCGGCC+AGG | - | chr4.2:93383426-93383445 | MS.gene034272:CDS | 55.0% | |
| ACAGCACGTGCTCTATCAGC+TGG | + | chr4.2:93382179-93382198 | None:intergenic | 55.0% | |
| AGTGGTTTACCGATCGGCCA+GGG | - | chr4.2:93383427-93383446 | MS.gene034272:CDS | 55.0% | |
| GAAGTGGCAAGGCGTGCAAA+AGG | - | chr4.2:93382116-93382135 | MS.gene034272:intron | 55.0% | |
| GCAGACAGACTGATCAGCCT+GGG | - | chr4.2:93383789-93383808 | MS.gene034272:CDS | 55.0% | |
| GCCTGCTTCTCCGAGTTTCT+CGG | + | chr4.2:93381152-93381171 | None:intergenic | 55.0% | |
| GCTGATAGAGCACGTGCTGT+TGG | - | chr4.2:93382179-93382198 | MS.gene034272:intron | 55.0% | |
| TCCGAGAAACTCGGAGAAGC+AGG | - | chr4.2:93381148-93381167 | MS.gene034272:CDS | 55.0% | |
| TGCAGACAGACTGATCAGCC+TGG | - | chr4.2:93383788-93383807 | MS.gene034272:CDS | 55.0% | |
| TGCTCCTATGGTTGCTCCTG+AGG | - | chr4.2:93383053-93383072 | MS.gene034272:intron | 55.0% | |
| TGGAGCTGTGCCTGCTATTG+AGG | - | chr4.2:93383955-93383974 | MS.gene034272:CDS | 55.0% | |
| ! | AGCCAGCACCAAAGAAGCAC+AGG | - | chr4.2:93382852-93382871 | MS.gene034272:intron | 55.0% |
| ! | CAGTTGGTATCCGGAGGAAG+TGG | - | chr4.2:93383389-93383408 | MS.gene034272:CDS | 55.0% |
| ! | TGCTGGCTGAGAAGCTAGGA+AGG | - | chr4.2:93383357-93383376 | MS.gene034272:intron | 55.0% |
| !! | GTTGTGCTGGCTGAGAAGCT+AGG | - | chr4.2:93383353-93383372 | MS.gene034272:intron | 55.0% |
| !! | TTGGTGCTGGCTCCAAGATG+AGG | + | chr4.2:93382844-93382863 | None:intergenic | 55.0% |
| GCGTCGGAAGAACATCGCGT+AGG | - | chr4.2:93383870-93383889 | MS.gene034272:CDS | 60.0% | |
| GTGGTTTACCGATCGGCCAG+GGG | - | chr4.2:93383428-93383447 | MS.gene034272:CDS | 60.0% | |
| ! | GCTGTGCAGTTGGTATCCGG+AGG | - | chr4.2:93383383-93383402 | MS.gene034272:CDS | 60.0% |
| GTCTAGGTCATCGGGACCCC+TGG | + | chr4.2:93383447-93383466 | None:intergenic | 65.0% | |
| CATCGGGACCCCTGGCCGAT+CGG | + | chr4.2:93383439-93383458 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 93380875 | 93384000 | 93380875 | ID=MS.gene034272 |
| chr4.2 | mRNA | 93380875 | 93384000 | 93380875 | ID=MS.gene034272.t1;Parent=MS.gene034272 |
| chr4.2 | exon | 93383370 | 93384000 | 93383370 | ID=MS.gene034272.t1.exon1;Parent=MS.gene034272.t1 |
| chr4.2 | CDS | 93383370 | 93384000 | 93383370 | ID=cds.MS.gene034272.t1;Parent=MS.gene034272.t1 |
| chr4.2 | exon | 93382466 | 93382842 | 93382466 | ID=MS.gene034272.t1.exon2;Parent=MS.gene034272.t1 |
| chr4.2 | CDS | 93382466 | 93382842 | 93382466 | ID=cds.MS.gene034272.t1;Parent=MS.gene034272.t1 |
| chr4.2 | exon | 93382002 | 93382112 | 93382002 | ID=MS.gene034272.t1.exon3;Parent=MS.gene034272.t1 |
| chr4.2 | CDS | 93382002 | 93382112 | 93382002 | ID=cds.MS.gene034272.t1;Parent=MS.gene034272.t1 |
| chr4.2 | exon | 93381801 | 93381896 | 93381801 | ID=MS.gene034272.t1.exon4;Parent=MS.gene034272.t1 |
| chr4.2 | CDS | 93381801 | 93381896 | 93381801 | ID=cds.MS.gene034272.t1;Parent=MS.gene034272.t1 |
| chr4.2 | exon | 93380875 | 93381546 | 93380875 | ID=MS.gene034272.t1.exon5;Parent=MS.gene034272.t1 |
| chr4.2 | CDS | 93380875 | 93381546 | 93380875 | ID=cds.MS.gene034272.t1;Parent=MS.gene034272.t1 |
| Gene Sequence |
| Protein sequence |
