AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71892

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71892.t1 MTR_4g101990 98.193 332 6 0 1 332 1 332 0.0 650
MS.gene71892.t1 MTR_7g074935 53.107 354 120 10 1 330 1 332 2.05e-90 273
MS.gene71892.t1 MTR_8g036160 48.603 358 153 5 1 330 1 355 6.03e-78 243
MS.gene71892.t1 MTR_1g076710 51.890 291 96 10 9 282 8 271 3.76e-72 227
MS.gene71892.t1 MTR_5g011680 44.966 298 117 9 16 284 5 284 9.02e-62 199
MS.gene71892.t1 MTR_1g061530 49.321 221 99 7 72 284 65 280 1.56e-59 195
MS.gene71892.t1 MTR_5g011620 47.292 277 122 5 15 291 4 256 2.76e-59 202
MS.gene71892.t1 MTR_6g061670 51.786 224 89 7 64 276 43 258 1.56e-55 184
MS.gene71892.t1 MTR_6g061670 52.273 220 89 7 64 276 43 253 2.70e-55 183
MS.gene71892.t1 MTR_8g031100 50.952 210 94 4 65 273 82 283 1.50e-54 182
MS.gene71892.t1 MTR_5g010330 49.515 206 91 6 72 277 70 262 1.46e-51 173
MS.gene71892.t1 MTR_8g098390 47.887 213 104 4 62 273 87 293 6.83e-51 172
MS.gene71892.t1 MTR_5g011610 60.000 150 52 2 144 291 56 199 3.05e-46 160
MS.gene71892.t1 MTR_5g011610 55.140 107 44 1 133 239 201 303 2.98e-27 109
MS.gene71892.t1 MTR_7g077120 41.935 279 135 8 61 327 80 343 9.05e-46 159
MS.gene71892.t1 MTR_4g055803 40.000 255 136 8 22 269 10 254 4.06e-41 149
MS.gene71892.t1 MTR_4g055833 40.244 246 125 8 22 260 10 240 4.18e-39 141
MS.gene71892.t1 MTR_4g098460 60.331 121 46 2 141 261 78 196 3.40e-37 135
MS.gene71892.t1 MTR_4g098460 57.937 126 46 3 141 261 78 201 7.31e-35 129
MS.gene71892.t1 MTR_1g079780 38.942 208 116 4 54 260 25 222 7.48e-34 127
MS.gene71892.t1 MTR_7g116320 43.939 198 104 2 70 267 72 262 9.08e-34 127
MS.gene71892.t1 MTR_4g055813 51.163 129 57 3 144 269 19 144 3.15e-32 122
MS.gene71892.t1 MTR_7g116320 44.149 188 98 2 70 257 72 252 3.07e-31 119
MS.gene71892.t1 MTR_6g060670 40.351 228 113 8 43 269 91 296 3.41e-31 119
MS.gene71892.t1 MTR_1g038960 37.815 238 122 10 33 260 42 263 1.88e-29 115
MS.gene71892.t1 MTR_5g013390 38.220 191 106 6 72 260 81 261 1.06e-27 110
MS.gene71892.t1 MTR_5g014360 39.062 192 104 6 73 260 121 303 1.37e-26 108
MS.gene71892.t1 MTR_4g055705 35.644 202 113 6 72 259 56 254 2.56e-26 106
MS.gene71892.t1 MTR_1g038990 36.842 190 91 8 72 260 82 243 1.74e-23 99.0
MS.gene71892.t1 MTR_5g041430 43.548 124 65 3 135 256 102 222 1.89e-22 96.3
MS.gene71892.t1 MTR_5g011600 43.548 124 60 2 196 318 3 117 1.96e-22 90.9
MS.gene71892.t1 MTR_3g023560 41.481 135 69 4 132 260 47 177 1.28e-20 89.7
MS.gene71892.t1 MTR_3g100470 38.400 125 75 2 144 267 101 224 2.23e-19 87.0
MS.gene71892.t1 MTR_3g068035 43.548 124 65 2 147 270 109 227 6.52e-19 86.3
MS.gene71892.t1 MTR_3g116100 43.363 113 59 3 155 267 154 261 3.48e-18 84.3
MS.gene71892.t1 MTR_5g066020 38.806 134 73 4 145 272 81 211 6.72e-18 82.4
MS.gene71892.t1 MTR_5g091630 30.804 224 129 3 71 277 6 220 1.27e-16 78.6
MS.gene71892.t1 MTR_5g011700 43.925 107 55 3 155 260 10 112 9.41e-16 75.1
MS.gene71892.t1 MTR_4g098450 43.860 114 60 1 147 260 106 215 1.69e-15 76.3
MS.gene71892.t1 MTR_1g044155 41.129 124 68 2 147 270 156 274 4.41e-15 75.5
MS.gene71892.t1 MTR_7g080980 45.614 114 58 1 147 260 87 196 4.47e-15 74.7
MS.gene71892.t1 MTR_5g011590 32.961 179 68 5 16 193 4 131 7.45e-15 70.9
MS.gene71892.t1 MTR_1g073860 42.105 114 62 1 147 260 124 233 1.59e-14 73.6
MS.gene71892.t1 MTR_5g011520 42.982 114 61 1 147 260 130 239 4.30e-14 72.4
MS.gene71892.t1 MTR_8g036060 43.860 114 60 1 147 260 116 225 7.67e-14 71.6
MS.gene71892.t1 MTR_1g079810 40.351 114 64 1 147 260 104 213 1.44e-12 67.8
MS.gene71892.t1 MTR_5g080580 39.024 123 70 2 148 270 120 237 1.31e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71892.t1 AT4G12080 59.831 356 111 15 1 329 5 355 9.18e-123 357
MS.gene71892.t1 AT4G22770 53.254 338 137 9 1 329 8 333 1.57e-95 286
MS.gene71892.t1 AT4G22770 53.254 338 137 9 1 329 8 333 1.57e-95 286
MS.gene71892.t1 AT4G25320 59.420 207 71 5 72 268 86 289 1.87e-72 230
MS.gene71892.t1 AT5G62260 57.604 217 76 6 70 274 74 286 6.64e-69 221
MS.gene71892.t1 AT5G62260 57.604 217 76 6 70 274 74 286 6.64e-69 221
MS.gene71892.t1 AT5G62260 56.863 204 75 5 70 261 74 276 8.01e-65 206
MS.gene71892.t1 AT5G51590 55.455 220 69 4 72 263 78 296 1.11e-64 210
MS.gene71892.t1 AT4G00200 52.281 285 93 12 1 274 1 253 1.49e-64 207
MS.gene71892.t1 AT4G00200 52.281 285 93 12 1 274 1 253 1.49e-64 207
MS.gene71892.t1 AT2G33620 50.435 230 98 7 70 298 95 309 4.90e-58 191
MS.gene71892.t1 AT2G33620 50.435 230 98 7 70 298 95 309 4.90e-58 191
MS.gene71892.t1 AT2G33620 50.435 230 98 7 70 298 95 309 4.90e-58 191
MS.gene71892.t1 AT2G33620 50.435 230 98 7 70 298 95 309 4.90e-58 191
MS.gene71892.t1 AT1G63470 52.062 194 87 4 72 263 105 294 1.41e-55 186
MS.gene71892.t1 AT2G45850 49.754 203 93 3 59 261 85 278 5.77e-53 178
MS.gene71892.t1 AT2G45850 49.754 203 93 3 59 261 85 278 5.77e-53 178
MS.gene71892.t1 AT3G61310 53.403 191 77 5 72 261 101 280 8.30e-51 172
MS.gene71892.t1 AT1G63480 48.276 203 92 5 72 274 93 282 1.59e-50 172
MS.gene71892.t1 AT1G63480 48.276 203 92 5 72 274 93 282 1.59e-50 172
MS.gene71892.t1 AT1G63480 48.276 203 92 5 72 274 93 282 1.59e-50 172
MS.gene71892.t1 AT1G63480 48.276 203 92 5 72 274 93 282 1.59e-50 172
MS.gene71892.t1 AT1G63480 48.276 203 92 5 72 274 93 282 1.59e-50 172
MS.gene71892.t1 AT1G63480 47.291 203 94 4 72 274 99 288 1.64e-50 172
MS.gene71892.t1 AT1G63480 47.291 203 94 4 72 274 99 288 1.64e-50 172
MS.gene71892.t1 AT2G45850 48.515 202 95 3 59 260 85 277 1.09e-49 167
MS.gene71892.t1 AT4G17950 39.837 246 103 7 72 285 131 363 6.05e-43 154
MS.gene71892.t1 AT5G46640 47.143 210 78 6 72 262 102 297 5.86e-40 145
MS.gene71892.t1 AT3G04590 43.229 192 99 3 70 261 103 284 1.88e-39 141
MS.gene71892.t1 AT3G04590 43.455 191 98 3 70 260 103 283 2.47e-38 141
MS.gene71892.t1 AT2G36560 42.975 121 68 1 141 260 102 222 1.70e-25 107
MS.gene71892.t1 AT3G60870 32.632 190 107 5 72 260 27 196 1.01e-18 84.7
MS.gene71892.t1 AT5G49700 36.765 136 82 3 144 275 83 218 1.04e-17 82.0
MS.gene71892.t1 AT1G14490 38.235 136 76 3 145 272 31 166 1.19e-16 77.8
MS.gene71892.t1 AT1G14490 38.235 136 76 3 145 272 50 185 1.45e-16 78.2
MS.gene71892.t1 AT2G42940 44.248 113 59 1 149 261 85 193 4.13e-16 77.4
MS.gene71892.t1 AT5G28590 41.322 121 46 3 140 260 26 121 7.43e-15 73.2
MS.gene71892.t1 AT4G14465 39.231 130 74 2 147 276 97 221 3.02e-14 72.4
MS.gene71892.t1 AT4G17800 42.982 114 61 1 147 260 112 221 3.30e-14 72.4
MS.gene71892.t1 AT3G55560 41.228 114 64 1 147 260 118 228 3.49e-14 72.4
MS.gene71892.t1 AT2G35270 38.462 130 75 2 147 276 108 232 7.10e-14 71.2
MS.gene71892.t1 AT3G04570 39.344 122 62 2 147 260 110 227 6.38e-13 68.9
MS.gene71892.t1 AT1G76500 36.585 123 65 2 147 260 102 220 7.49e-13 68.6
MS.gene71892.t1 AT4G22810 41.026 117 62 2 147 260 135 247 2.09e-11 64.3
MS.gene71892.t1 AT2G45430 41.525 118 61 3 147 260 119 232 2.67e-11 63.9

Find 103 sgRNAs with CRISPR-Local

Find 265 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGTCAGCCCGATTCTTC+TGG 0.153062 8.3:-19423766 MS.gene71892:CDS
ACATCATGCTTCTGATTTCT+TGG 0.217240 8.3:+19422925 None:intergenic
GGAGTTTGGTTGTCTGTTCT+TGG 0.245727 8.3:+19427046 None:intergenic
TTTGAAATTCTGTCTTTATC+TGG 0.274522 8.3:-19423539 MS.gene71892:CDS
CTTCCTCTCTTCTTCTTCTC+TGG 0.315470 8.3:+19426914 None:intergenic
TTCGTCAGCCCGATTCTTCT+GGG 0.316075 8.3:-19423765 MS.gene71892:CDS
GATATTAATGTGTCTCTTCC+TGG 0.316878 8.3:-19422763 MS.gene71892:CDS
CTTCCTTCCGTGGAGATAAT+TGG 0.333200 8.3:-19422828 MS.gene71892:CDS
TGGAGGAGTAGCTGGTTTGT+TGG 0.341681 8.3:-19423423 MS.gene71892:CDS
TCCGCAACAACCGCCGTATA+CGG 0.346397 8.3:-19426972 MS.gene71892:CDS
GTTCCTCCTCCACTTTCATT+TGG 0.347793 8.3:+19423506 None:intergenic
CTGATCCGGTGGTCGGAGTT+TGG 0.366555 8.3:+19427032 None:intergenic
AGGCGGCATGAGTGTGTCTT+TGG 0.382271 8.3:-19423471 MS.gene71892:CDS
AGAAAATGAAATAACCTTCA+TGG 0.401967 8.3:+19423849 None:intergenic
GAGGCTAGTGGTGGTGTTAG+TGG 0.403429 8.3:-19427118 MS.gene71892:CDS
GAATGGGTCCCTTGCTCTGT+TGG 0.411486 8.3:-19424175 MS.gene71892:CDS
GGCGGTGGTAACGGCGTCTC+CGG 0.413422 8.3:-19426951 MS.gene71892:CDS
GCCGCCGGTGATTGATTTCA+CGG 0.413441 8.3:-19426816 MS.gene71892:CDS
TTATCCTTTGCATCCGATGC+TGG 0.421865 8.3:+19422796 None:intergenic
AAATTTGAGTTGGAAAATAT+AGG 0.440668 8.3:-19426746 MS.gene71892:intron
GGAGGAACACGAAGCAGATC+AGG 0.444348 8.3:-19423491 MS.gene71892:CDS
GTATGCATTCTTTCAGCAAA+TGG 0.463040 8.3:-19423808 MS.gene71892:CDS
AACGGAGCAGACGACGATAT+CGG 0.463859 8.3:+19426839 None:intergenic
TGGTGTTAGTGGTGGCGTTA+CGG 0.465659 8.3:-19427107 MS.gene71892:CDS
TAAAAGCTGAACCGCTGATC+CGG 0.473642 8.3:+19427018 None:intergenic
AGTCCTGATGGACGTGTTGT+TGG 0.482154 8.3:-19423446 MS.gene71892:CDS
GCCGTTACCACCGCCGTATA+CGG 0.484752 8.3:+19426959 None:intergenic
TTCTTGGCTTCTGCTCATGT+TGG 0.484881 8.3:+19422941 None:intergenic
GTTGTTGGTGGAGGAGTAGC+TGG 0.488351 8.3:-19423431 MS.gene71892:CDS
CCACCAACAACACGTCCATC+AGG 0.492937 8.3:+19423443 None:intergenic
GAGCAAAACGAAATTTGAGT+TGG 0.494483 8.3:-19426756 MS.gene71892:CDS
GTAGGGATGGGAACAACAGC+AGG 0.496848 8.3:+19422883 None:intergenic
CACATCATCACTGTTAATGC+TGG 0.504861 8.3:-19424136 MS.gene71892:CDS
GATAGAATAAATACCTGCAC+TGG 0.507918 8.3:+19423389 None:intergenic
GAAGTTACTGATGATAGAAT+AGG 0.508118 8.3:+19422847 None:intergenic
TACTGGATCAAGAGTAGGGA+TGG 0.511973 8.3:+19422870 None:intergenic
GCAGACGACGATATCGGCTT+CGG 0.515428 8.3:+19426845 None:intergenic
TCCTTATGAAATTAGCCTCC+AGG 0.516288 8.3:+19422745 None:intergenic
AAATCAATCACCGGCGGCAA+CGG 0.516482 8.3:+19426821 None:intergenic
ATGTTAGGATGTTACCATGA+AGG 0.517184 8.3:-19423863 MS.gene71892:intron
GTCGTCTGCTCCGTTGCCGC+CGG 0.518072 8.3:-19426831 MS.gene71892:CDS
ACTGATGATAGAATAGGTAC+TGG 0.519373 8.3:+19422853 None:intergenic
CCTGATGGACGTGTTGTTGG+TGG 0.524712 8.3:-19423443 MS.gene71892:CDS
AGGAGTAGCTGGTTTGTTGG+TGG 0.526402 8.3:-19423420 MS.gene71892:CDS
AGTGGTGGCGTTACGGTGGT+CGG 0.531800 8.3:-19427100 MS.gene71892:CDS
TCTGGCACCGTCGTAACTGC+CGG 0.535791 8.3:+19426932 None:intergenic
GCCGTATACGGCGGTGGTAA+CGG 0.539445 8.3:-19426960 MS.gene71892:CDS
TCGTCAGCCCGATTCTTCTG+GGG 0.541650 8.3:-19423764 MS.gene71892:CDS
CAGCATTAACAGTGATGATG+TGG 0.544475 8.3:+19424137 None:intergenic
ATAGGTACTGGATCAAGAGT+AGG 0.547053 8.3:+19422865 None:intergenic
GGTGGCTGCAAGTCCAGTGC+AGG 0.550883 8.3:-19423402 MS.gene71892:intron
ATGCCAAATGAAAGTGGAGG+AGG 0.551611 8.3:-19423509 MS.gene71892:CDS
GTGTCTTTGGCAAGTCCTGA+TGG 0.556787 8.3:-19423458 MS.gene71892:CDS
TCGTTCATGCCAAATGAAAG+TGG 0.559940 8.3:-19423515 MS.gene71892:CDS
GACAACCAAACTCCGACCAC+CGG 0.563057 8.3:-19427037 MS.gene71892:CDS
AAATTTGAACCAACAGAGCA+AGG 0.567744 8.3:+19424166 None:intergenic
GCCGTATACGGCGGTTGTTG+CGG 0.577945 8.3:+19426971 None:intergenic
TAGGTACTGGATCAAGAGTA+GGG 0.580504 8.3:+19422866 None:intergenic
AACTCCGACCACCGGATCAG+CGG 0.581732 8.3:-19427029 MS.gene71892:CDS
CGTCAGCCCGATTCTTCTGG+GGG 0.586127 8.3:-19423763 MS.gene71892:CDS
GACACATTAATATCAGCAGC+GGG 0.589557 8.3:+19422772 None:intergenic
CATCACTGTTAATGCTGGAG+AGG 0.596487 8.3:-19424131 MS.gene71892:intron
AATTTGAACCAACAGAGCAA+GGG 0.597677 8.3:+19424167 None:intergenic
ACAACCGCCGTATACGGCGG+TGG 0.597858 8.3:-19426966 MS.gene71892:CDS
TTGGTCTGCTGTGCCAGCAT+CGG 0.597910 8.3:-19422809 MS.gene71892:CDS
GGCGTCTCCGGCAGTTACGA+CGG 0.598191 8.3:-19426939 MS.gene71892:CDS
GATGGACGTGTTGTTGGTGG+AGG 0.601930 8.3:-19423440 MS.gene71892:CDS
AAGCTGAACCGCTGATCCGG+TGG 0.604731 8.3:+19427021 None:intergenic
GTATACGGCGGTTGTTGCGG+AGG 0.606155 8.3:+19426974 None:intergenic
TGTGCCAGCATCGGATGCAA+AGG 0.609579 8.3:-19422800 MS.gene71892:CDS
TCATCAGTAACTTCCTTCCG+TGG 0.610671 8.3:-19422838 MS.gene71892:CDS
GAAAGAATGCATACCGCTCG+AGG 0.613852 8.3:+19423817 None:intergenic
TCCGCCGTGAAATCAATCAC+CGG 0.617619 8.3:+19426812 None:intergenic
TGAACCGCTGATCCGGTGGT+CGG 0.619667 8.3:+19427025 None:intergenic
CCGAGAAAATATGCAGCGGA+TGG 0.621272 8.3:-19426890 MS.gene71892:CDS
GCTAGTGGTGGTGTTAGTGG+TGG 0.622164 8.3:-19427115 MS.gene71892:CDS
GGTCGGATCAGATGCTCCGT+CGG 0.623317 8.3:-19427083 MS.gene71892:CDS
TGTATCTACCAGGTAGTGGT+TGG 0.624215 8.3:-19422982 MS.gene71892:intron
GTGCCAGAGAAGAAGAAGAG+AGG 0.624418 8.3:-19426917 MS.gene71892:CDS
AGACCAATTATCTCCACGGA+AGG 0.635192 8.3:+19422825 None:intergenic
TTCTCAGCAAGGACCTCGAG+CGG 0.641808 8.3:-19423830 MS.gene71892:CDS
AGCATTAACAGTGATGATGT+GGG 0.643782 8.3:+19424138 None:intergenic
ACTGGATCAAGAGTAGGGAT+GGG 0.644029 8.3:+19422871 None:intergenic
CAGCAGACCAATTATCTCCA+CGG 0.646524 8.3:+19422821 None:intergenic
GGAGCCACGTGGTACTCCGA+CGG 0.654960 8.3:+19427067 None:intergenic
GCAACAACCGCCGTATACGG+CGG 0.658539 8.3:-19426969 MS.gene71892:CDS
AGACACATTAATATCAGCAG+CGG 0.659162 8.3:+19422771 None:intergenic
AACAACAGCAGGAGATGACA+CGG 0.660123 8.3:+19422894 None:intergenic
AGCGGATGGTTCAGTGACAG+CGG 0.663385 8.3:-19426876 MS.gene71892:CDS
GGAACACGAAGCAGATCAGG+CGG 0.674892 8.3:-19423488 MS.gene71892:CDS
AAGAAATCAGAAGCATGATG+TGG 0.682976 8.3:-19422923 MS.gene71892:CDS
ATTAATGTGTCTCTTCCTGG+AGG 0.686956 8.3:-19422760 MS.gene71892:CDS
GTTACCACCGCCGTATACGG+CGG 0.693943 8.3:+19426962 None:intergenic
TGTTAGTGGTGGCGTTACGG+TGG 0.696342 8.3:-19427104 MS.gene71892:CDS
TTTGAAAACATGGAGGCTAG+TGG 0.706034 8.3:-19427130 None:intergenic
GAAAACATGGAGGCTAGTGG+TGG 0.706697 8.3:-19427127 None:intergenic
GCCGTGAAATCAATCACCGG+CGG 0.714414 8.3:+19426815 None:intergenic
AAGACCGAGAAAATATGCAG+CGG 0.716009 8.3:-19426894 MS.gene71892:CDS
TTCATGCCAAATGAAAGTGG+AGG 0.721594 8.3:-19423512 MS.gene71892:CDS
TGCTCCGTCGGAGTACCACG+TGG 0.724270 8.3:-19427071 MS.gene71892:CDS
GCATTAACAGTGATGATGTG+GGG 0.743775 8.3:+19424139 None:intergenic
TGTCTGTTCTTGGAGCCACG+TGG 0.751370 8.3:+19427056 None:intergenic
GCCGGTGATTGATTTCACGG+CGG 0.764503 8.3:-19426813 MS.gene71892:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTAAATTAAATTAAAT+GGG - chr8.3:19423860-19423879 MS.gene71892:intron 0.0%
!! TTAAATTAAATTAAATTAAA+TGG - chr8.3:19423859-19423878 MS.gene71892:CDS 0.0%
!! AAATATTCAAATTCTTAATT+TGG - chr8.3:19425586-19425605 MS.gene71892:intron 10.0%
!! AATTAAAAGTTAAACAAAAA+GGG + chr8.3:19425173-19425192 None:intergenic 10.0%
!! TTACAAAAAATAAAAAACTA+TGG + chr8.3:19423496-19423515 None:intergenic 10.0%
!!! TCTATTTTATATTTTACTAA+TGG - chr8.3:19424884-19424903 MS.gene71892:intron 10.0%
!!! TTTTTTGTAGAATAAAATTA+GGG - chr8.3:19425845-19425864 MS.gene71892:intron 10.0%
!! AGAATATTGAAAATTGAATT+TGG + chr8.3:19424402-19424421 None:intergenic 15.0%
!! GAATTAAAAGTTAAACAAAA+AGG + chr8.3:19425174-19425193 None:intergenic 15.0%
!! TAATTAGATAGTATCAATTA+AGG + chr8.3:19424243-19424262 None:intergenic 15.0%
!!! GTTTTTTGTAGAATAAAATT+AGG - chr8.3:19425844-19425863 MS.gene71892:intron 15.0%
!!! TGTTAACATTTACATTTTTT+AGG - chr8.3:19425678-19425697 MS.gene71892:intron 15.0%
!!! TTTGTAATTCTCTAAAAATT+TGG - chr8.3:19425280-19425299 MS.gene71892:intron 15.0%
!! AAAACAATGTATGGAAAAAA+AGG + chr8.3:19425097-19425116 None:intergenic 20.0%
!! AAAGACTTAAATATTATTGC+GGG - chr8.3:19423640-19423659 MS.gene71892:intron 20.0%
!! AATTAACTCAAAACAATGTA+TGG + chr8.3:19425106-19425125 None:intergenic 20.0%
!! ACTATTTCAATATCTTAGTT+TGG - chr8.3:19424800-19424819 MS.gene71892:intron 20.0%
!! ATATGTAAAAGCAGAAATTT+GGG + chr8.3:19425237-19425256 None:intergenic 20.0%
!! ATTGAAAATGATAAAAGTCT+CGG + chr8.3:19425643-19425662 None:intergenic 20.0%
!! GAAAGACTTAAATATTATTG+CGG - chr8.3:19423639-19423658 MS.gene71892:intron 20.0%
!!! AAATTTGAGTTGGAAAATAT+AGG - chr8.3:19423131-19423150 MS.gene71892:intron 20.0%
!!! ATTTACATTTTTTAGGTGAA+TGG - chr8.3:19425685-19425704 MS.gene71892:intron 20.0%
!!! CAATTGTCAATTTTCAAAAT+TGG - chr8.3:19424327-19424346 MS.gene71892:intron 20.0%
!!! GCATTTAGTTTCATATTAAA+TGG - chr8.3:19425373-19425392 MS.gene71892:intron 20.0%
!!! TTGAATGAACCTTTTTAATT+TGG - chr8.3:19426575-19426594 MS.gene71892:intron 20.0%
!!! TTTACATTTTTTAGGTGAAT+GGG - chr8.3:19425686-19425705 MS.gene71892:intron 20.0%
! AATGGTCATATATTAGTACA+TGG + chr8.3:19424432-19424451 None:intergenic 25.0%
! ACTAAAATCTTTCCAATTCT+AGG - chr8.3:19423426-19423445 MS.gene71892:CDS 25.0%
! ACTTATGTTTATAGCTTATG+TGG - chr8.3:19423312-19423331 MS.gene71892:intron 25.0%
! AGAAAATGAAATAACCTTCA+TGG + chr8.3:19426031-19426050 None:intergenic 25.0%
! ATAAACAGAATAAAAGTGAG+AGG - chr8.3:19425875-19425894 MS.gene71892:intron 25.0%
! ATGGTCATATATTAGTACAT+GGG + chr8.3:19424431-19424450 None:intergenic 25.0%
! CATATGTAAAAGCAGAAATT+TGG + chr8.3:19425238-19425257 None:intergenic 25.0%
! CGTCATTCATTGAAAATTAT+AGG + chr8.3:19424988-19425007 None:intergenic 25.0%
! CTTACTTAGAATTATAGTGT+TGG + chr8.3:19424583-19424602 None:intergenic 25.0%
! TAAACAGAATAAAAGTGAGA+GGG - chr8.3:19425876-19425895 MS.gene71892:intron 25.0%
! TAAATGGGATACTAACTATT+TGG - chr8.3:19423885-19423904 MS.gene71892:intron 25.0%
! TAAGAGTTATCTTTCTCAAA+TGG + chr8.3:19426682-19426701 None:intergenic 25.0%
! TATAGAAGAGAACTTTCATT+TGG - chr8.3:19426191-19426210 MS.gene71892:intron 25.0%
! TCTATGCTGTCTTATATATT+AGG - chr8.3:19425456-19425475 MS.gene71892:intron 25.0%
! TCTTAGAATCTTATTCTCTT+AGG - chr8.3:19425525-19425544 MS.gene71892:intron 25.0%
! TTAGATAGTATCAATTAAGG+AGG + chr8.3:19424240-19424259 None:intergenic 25.0%
!! ACTCATTTGTTGAGAATTTA+TGG - chr8.3:19424682-19424701 MS.gene71892:intron 25.0%
!! TTTGAAATTCTGTCTTTATC+TGG - chr8.3:19426338-19426357 MS.gene71892:intron 25.0%
!!! AAGCTTCTAAATTTGCTAAT+TGG - chr8.3:19425198-19425217 MS.gene71892:intron 25.0%
!!! ACAAAGCTAAAGTTTTAAGT+TGG + chr8.3:19425265-19425284 None:intergenic 25.0%
!!! CTTAGTGCAATTTTGAAAAA+AGG + chr8.3:19424479-19424498 None:intergenic 25.0%
!!! TTATAAGGCGTCTATAATTT+TGG + chr8.3:19425612-19425631 None:intergenic 25.0%
AAAACAACTCAATGAAGCTT+AGG + chr8.3:19423987-19424006 None:intergenic 30.0%
AGGTATTTATTCTATCCGTA+AGG - chr8.3:19426495-19426514 MS.gene71892:intron 30.0%
ATACGGTATGTTTGAATTGA+CGG + chr8.3:19423564-19423583 None:intergenic 30.0%
ATCATTATGCTTACACTTTG+CGG + chr8.3:19423911-19423930 None:intergenic 30.0%
ATTCAAACATACCGTATGTT+AGG - chr8.3:19423567-19423586 MS.gene71892:intron 30.0%
ATTTCAAACATGTATCTACC+AGG - chr8.3:19426885-19426904 MS.gene71892:CDS 30.0%
ATTTGCAAAATTCTCCCTTA+CGG + chr8.3:19426513-19426532 None:intergenic 30.0%
CTCAAAAGTGACTTAATGTT+TGG - chr8.3:19423402-19423421 MS.gene71892:intron 30.0%
GAAAGTTCTCTTCTATAAGA+TGG + chr8.3:19426188-19426207 None:intergenic 30.0%
GAAGTTACTGATGATAGAAT+AGG + chr8.3:19427033-19427052 None:intergenic 30.0%
GAGGGTAAATATCTTATATC+AGG + chr8.3:19425412-19425431 None:intergenic 30.0%
GATGTATCTATACAATTCCA+CGG - chr8.3:19424300-19424319 MS.gene71892:intron 30.0%
GGTATTTATTCTATCCGTAA+GGG - chr8.3:19426496-19426515 MS.gene71892:intron 30.0%
GTAGATCATTAAATGCATTG+TGG + chr8.3:19426219-19426238 None:intergenic 30.0%
GTATCAATTAAAGAAGAGAG+AGG + chr8.3:19424269-19424288 None:intergenic 30.0%
GTGAAATTGAATGAGCAAAT+TGG + chr8.3:19424374-19424393 None:intergenic 30.0%
TAGGCAATTGCAAATTTCTT+GGG + chr8.3:19423968-19423987 None:intergenic 30.0%
TAGTAAGAACTTACTGACAT+AGG + chr8.3:19424652-19424671 None:intergenic 30.0%
TATCTTATATCAGGTAGTCA+AGG + chr8.3:19425403-19425422 None:intergenic 30.0%
TATGCTGTAATCCTGTTATT+TGG - chr8.3:19425793-19425812 MS.gene71892:intron 30.0%
TCGAACATAATACCTAGAAT+TGG + chr8.3:19423441-19423460 None:intergenic 30.0%
TCTAGCAAACAAACATTCAA+TGG - chr8.3:19426782-19426801 MS.gene71892:CDS 30.0%
TGAATCACGCCAAATTAAAA+AGG + chr8.3:19426587-19426606 None:intergenic 30.0%
TTAGGCAATTGCAAATTTCT+TGG + chr8.3:19423969-19423988 None:intergenic 30.0%
TTATAGCAACATGAATAAGC+TGG - chr8.3:19426813-19426832 MS.gene71892:CDS 30.0%
TTGAATGAGCAAATTGGTAA+TGG + chr8.3:19424368-19424387 None:intergenic 30.0%
TTTGTGTGTATGGTTATGTT+AGG - chr8.3:19425999-19426018 MS.gene71892:intron 30.0%
! AAAAACTGTGTACTGAGTTT+TGG - chr8.3:19424842-19424861 MS.gene71892:intron 30.0%
! AAATTGACAATTGATAACCG+TGG + chr8.3:19424320-19424339 None:intergenic 30.0%
! AGTGTGAAATGTTACTGTTT+TGG - chr8.3:19423220-19423239 MS.gene71892:intron 30.0%
! AGTTAGTTGATACTGTTAAG+TGG - chr8.3:19423750-19423769 MS.gene71892:CDS 30.0%
! ATGCTGTAATCCTGTTATTT+GGG - chr8.3:19425794-19425813 MS.gene71892:intron 30.0%
! GAATGTTTGTTTGCTAGAAA+TGG + chr8.3:19426780-19426799 None:intergenic 30.0%
! GGTAGATACATGTTTGAAAT+TGG + chr8.3:19426885-19426904 None:intergenic 30.0%
! TCAGTACACAGTTTTTAACA+TGG + chr8.3:19424838-19424857 None:intergenic 30.0%
! TGAATGAGCAAATTGGTAAT+GGG + chr8.3:19424367-19424386 None:intergenic 30.0%
! TGATATAAAGCATCTTGAGA+TGG - chr8.3:19425486-19425505 MS.gene71892:intron 30.0%
! TTTTCAATTCCCCAAATAAC+AGG + chr8.3:19425807-19425826 None:intergenic 30.0%
!! CATATTTCTAGCCTAACATA+CGG + chr8.3:19423581-19423600 None:intergenic 30.0%
!! GTTATTTCATTTTCTCAGCA+AGG - chr8.3:19426036-19426055 MS.gene71892:intron 30.0%
!!! ACTTCTTTTTCAGTGATAAC+TGG - chr8.3:19425946-19425965 MS.gene71892:intron 30.0%
!!! CAAACATTAAGTCACTTTTG+AGG + chr8.3:19423404-19423423 None:intergenic 30.0%
!!! GTTGTTTTTTGTGTATGAGA+TGG - chr8.3:19423999-19424018 MS.gene71892:intron 30.0%
AAAAAAGGAGTCGAGAAAAG+TGG + chr8.3:19424464-19424483 None:intergenic 35.0%
AAATTTGAACCAACAGAGCA+AGG + chr8.3:19425714-19425733 None:intergenic 35.0%
AATTTGAACCAACAGAGCAA+GGG + chr8.3:19425713-19425732 None:intergenic 35.0%
ACATCATGCTTCTGATTTCT+TGG + chr8.3:19426955-19426974 None:intergenic 35.0%
ACCATGATGCTGATATAACT+CGG - chr8.3:19424147-19424166 MS.gene71892:CDS 35.0%
ACTGATGATAGAATAGGTAC+TGG + chr8.3:19427027-19427046 None:intergenic 35.0%
ACTGCACTACAATTATCAAG+AGG - chr8.3:19424501-19424520 MS.gene71892:intron 35.0%
AGACACATTAATATCAGCAG+CGG + chr8.3:19427109-19427128 None:intergenic 35.0%
AGTTATATCAGCATCATGGT+CGG + chr8.3:19424147-19424166 None:intergenic 35.0%
ATCCCACTATATGCTCAAAA+AGG + chr8.3:19426268-19426287 None:intergenic 35.0%
ATGTTAGGATGTTACCATGA+AGG - chr8.3:19426014-19426033 MS.gene71892:intron 35.0%
GAAATGGAGTTGTCATTGTA+AGG + chr8.3:19426764-19426783 None:intergenic 35.0%
GAGCAAAACGAAATTTGAGT+TGG - chr8.3:19423121-19423140 MS.gene71892:intron 35.0%
GATACAATACACATCCGATA+CGG + chr8.3:19425016-19425035 None:intergenic 35.0%
GATAGAATAAATACCTGCAC+TGG + chr8.3:19426491-19426510 None:intergenic 35.0%
GATAGTATCAATTAAGGAGG+AGG + chr8.3:19424237-19424256 None:intergenic 35.0%
GATATTAATGTGTCTCTTCC+TGG - chr8.3:19427114-19427133 MS.gene71892:CDS 35.0%
GCAACTGATGTTTAACACTT+TGG - chr8.3:19423600-19423619 MS.gene71892:intron 35.0%
GTATGCATTCTTTCAGCAAA+TGG - chr8.3:19426069-19426088 MS.gene71892:intron 35.0%
GTCAATTCATCTCATGTGTT+CGG - chr8.3:19424186-19424205 MS.gene71892:intron 35.0%
GTTTCTTGTCTGTGATTCAT+AGG - chr8.3:19425044-19425063 MS.gene71892:intron 35.0%
TAGTAGTAATCTCAGAAGCA+CGG - chr8.3:19424079-19424098 MS.gene71892:intron 35.0%
TATCAGCAAGTAAGCTGTAA+TGG + chr8.3:19423785-19423804 None:intergenic 35.0%
TGTAAGCATAATGATGAAGC+TGG - chr8.3:19423916-19423935 MS.gene71892:intron 35.0%
! AAGAAATCAGAAGCATGATG+TGG - chr8.3:19426954-19426973 MS.gene71892:CDS 35.0%
! AGCATTAACAGTGATGATGT+GGG + chr8.3:19425742-19425761 None:intergenic 35.0%
! TGCTGTAATCCTGTTATTTG+GGG - chr8.3:19425795-19425814 MS.gene71892:intron 35.0%
! TGTCAGCAATTTTGTGTGTA+TGG - chr8.3:19425989-19426008 MS.gene71892:intron 35.0%
! TTAATTTGGCGTGATTCAAG+TGG - chr8.3:19426589-19426608 MS.gene71892:intron 35.0%
! TTACAGCTTACTTGCTGATA+TGG - chr8.3:19423785-19423804 MS.gene71892:CDS 35.0%
!! AGATGATAATGCTCCTCTTT+TGG - chr8.3:19424626-19424645 MS.gene71892:intron 35.0%
!! CAAATTGGTAATGGGATCAT+TGG + chr8.3:19424359-19424378 None:intergenic 35.0%
!! TGCCTTTTTGAGCATATAGT+GGG - chr8.3:19426263-19426282 MS.gene71892:intron 35.0%
!! TTTTGAGCATATAGTGGGAT+TGG - chr8.3:19426268-19426287 MS.gene71892:intron 35.0%
!!! TTCTGACATTGTGTTGCTTT+TGG + chr8.3:19424547-19424566 None:intergenic 35.0%
AACATGTATCTACCAGGTAG+TGG - chr8.3:19426891-19426910 MS.gene71892:CDS 40.0%
AAGACCGAGAAAATATGCAG+CGG - chr8.3:19422983-19423002 MS.gene71892:intron 40.0%
AGAGTAGACCACAACTATTG+AGG + chr8.3:19423364-19423383 None:intergenic 40.0%
AGTGAGTTCAGATTCAGATG+TGG - chr8.3:19423336-19423355 MS.gene71892:intron 40.0%
AGTGATCACACAGATATGAC+AGG + chr8.3:19425925-19425944 None:intergenic 40.0%
ATTAATGTGTCTCTTCCTGG+AGG - chr8.3:19427117-19427136 MS.gene71892:CDS 40.0%
CACATCATCACTGTTAATGC+TGG - chr8.3:19425741-19425760 MS.gene71892:intron 40.0%
CGCTGAGTTTGACTAAATCA+CGG - chr8.3:19423465-19423484 MS.gene71892:CDS 40.0%
GACACATTAATATCAGCAGC+GGG + chr8.3:19427108-19427127 None:intergenic 40.0%
GAGATGAATTGACTGTATCG+CGG + chr8.3:19424179-19424198 None:intergenic 40.0%
GTCTCGGCGTTTCAATTATA+AGG + chr8.3:19425627-19425646 None:intergenic 40.0%
GTGAGTTCAGATTCAGATGT+GGG - chr8.3:19423337-19423356 MS.gene71892:intron 40.0%
GTTTGAGTCTCTTAAGCATG+TGG - chr8.3:19426618-19426637 MS.gene71892:intron 40.0%
TAAAACTACCAACCACTACC+TGG + chr8.3:19426906-19426925 None:intergenic 40.0%
TCCGAGTTATATCAGCATCA+TGG + chr8.3:19424151-19424170 None:intergenic 40.0%
TCGTTCATGCCAAATGAAAG+TGG - chr8.3:19426362-19426381 MS.gene71892:intron 40.0%
TGACCACAAAAGACCAAAAG+AGG + chr8.3:19423703-19423722 None:intergenic 40.0%
TTACTGACATAGGCCAAAAG+AGG + chr8.3:19424642-19424661 None:intergenic 40.0%
TTCATGCCAAATGAAAGTGG+AGG - chr8.3:19426365-19426384 MS.gene71892:intron 40.0%
! CAGCATTAACAGTGATGATG+TGG + chr8.3:19425743-19425762 None:intergenic 40.0%
! GCATTAACAGTGATGATGTG+GGG + chr8.3:19425741-19425760 None:intergenic 40.0%
! GTTGACATCTGTTCCTCTTT+TGG - chr8.3:19423687-19423706 MS.gene71892:intron 40.0%
! TTTTGGATTGTGTTGTGCTG+TGG - chr8.3:19423237-19423256 MS.gene71892:intron 40.0%
!! ACTTATCTCGGTGTTTCTAC+AGG - chr8.3:19426310-19426329 MS.gene71892:intron 40.0%
!! ATAGGTACTGGATCAAGAGT+AGG + chr8.3:19427015-19427034 None:intergenic 40.0%
!! CTTATCTCGGTGTTTCTACA+GGG - chr8.3:19426311-19426330 MS.gene71892:intron 40.0%
!! GGTCTACTCTTGATAATGTG+AGG - chr8.3:19423374-19423393 MS.gene71892:intron 40.0%
!! GTGCCTTTTTGAGCATATAG+TGG - chr8.3:19426262-19426281 MS.gene71892:intron 40.0%
!! GTTCCTCTTTTGGTCTTTTG+TGG - chr8.3:19423697-19423716 MS.gene71892:intron 40.0%
!! TAGGTACTGGATCAAGAGTA+GGG + chr8.3:19427014-19427033 None:intergenic 40.0%
!!! GGTAGTGGTTGGTAGTTTTA+TGG - chr8.3:19426906-19426925 MS.gene71892:CDS 40.0%
AACAACAGCAGGAGATGACA+CGG + chr8.3:19426986-19427005 None:intergenic 45.0%
AAGGAGTCGAGAAAAGTGGT+AGG + chr8.3:19424460-19424479 None:intergenic 45.0%
ACTGGATCAAGAGTAGGGAT+GGG + chr8.3:19427009-19427028 None:intergenic 45.0%
AGACCAATTATCTCCACGGA+AGG + chr8.3:19427055-19427074 None:intergenic 45.0%
ATACACTAAAGTGGCTTCCG+AGG - chr8.3:19424102-19424121 MS.gene71892:intron 45.0%
ATGCCAAATGAAAGTGGAGG+AGG - chr8.3:19426368-19426387 MS.gene71892:intron 45.0%
ATGTGGGACCTCAATAGTTG+TGG - chr8.3:19423353-19423372 MS.gene71892:intron 45.0%
CAGCAGACCAATTATCTCCA+CGG + chr8.3:19427059-19427078 None:intergenic 45.0%
CATCACTGTTAATGCTGGAG+AGG - chr8.3:19425746-19425765 MS.gene71892:intron 45.0%
CTGAGTTGCATGCAATCTAC+CGG - chr8.3:19424749-19424768 MS.gene71892:intron 45.0%
CTTCCTCTCTTCTTCTTCTC+TGG + chr8.3:19422966-19422985 None:intergenic 45.0%
CTTCCTTCCGTGGAGATAAT+TGG - chr8.3:19427049-19427068 MS.gene71892:CDS 45.0%
GAAAAGTGGTAGGAGGTCAA+TGG + chr8.3:19424450-19424469 None:intergenic 45.0%
GAAGCACGGATACACTAAAG+TGG - chr8.3:19424093-19424112 MS.gene71892:intron 45.0%
GCACGCACAGTTACTTATCT+CGG - chr8.3:19426298-19426317 MS.gene71892:intron 45.0%
GGAGTTTGGTTGTCTGTTCT+TGG + chr8.3:19422834-19422853 None:intergenic 45.0%
GTCTCTTAAGCATGTGGTCA+TGG - chr8.3:19426624-19426643 MS.gene71892:intron 45.0%
GTTCCTCCTCCACTTTCATT+TGG + chr8.3:19426374-19426393 None:intergenic 45.0%
TAAAAGCTGAACCGCTGATC+CGG + chr8.3:19422862-19422881 None:intergenic 45.0%
TACTGGATCAAGAGTAGGGA+TGG + chr8.3:19427010-19427029 None:intergenic 45.0%
TCATCAGTAACTTCCTTCCG+TGG - chr8.3:19427039-19427058 MS.gene71892:CDS 45.0%
TGAATGACGAATCGCCGTAT+CGG - chr8.3:19424999-19425018 MS.gene71892:intron 45.0%
TTATCCTTTGCATCCGATGC+TGG + chr8.3:19427084-19427103 None:intergenic 45.0%
TTCTTGGCTTCTGCTCATGT+TGG + chr8.3:19426939-19426958 None:intergenic 45.0%
TTTGGCGTGATTCAAGTGGT+CGG - chr8.3:19426593-19426612 MS.gene71892:intron 45.0%
! ATCAGCGGTTCAGCTTTTAG+CGG - chr8.3:19422863-19422882 MS.gene71892:CDS 45.0%
! CCATCCGCTGCATATTTTCT+CGG + chr8.3:19422990-19423009 None:intergenic 45.0%
! GTTTTGCTCACAGAGCTAAC+TGG + chr8.3:19423110-19423129 None:intergenic 45.0%
! TGTATCTACCAGGTAGTGGT+TGG - chr8.3:19426895-19426914 MS.gene71892:CDS 45.0%
!!! GTGGTTGGTAGTTTTATGGC+AGG - chr8.3:19426910-19426929 MS.gene71892:CDS 45.0%
!!! ATTTAATTTAATTTAATCAT+AGG + chr8.3:19423855-19423874 None:intergenic 5.0%
AAATCAATCACCGGCGGCAA+CGG + chr8.3:19423059-19423078 None:intergenic 50.0%
AACGGAGCAGACGACGATAT+CGG + chr8.3:19423041-19423060 None:intergenic 50.0%
AATGTGCCCCCAGAAGAATC+GGG + chr8.3:19426123-19426142 None:intergenic 50.0%
AGTGCAGCAGCAATCTGAGA+GGG + chr8.3:19425430-19425449 None:intergenic 50.0%
ATCTCCTCCTTCACCAACAC+CGG + chr8.3:19424771-19424790 None:intergenic 50.0%
CAATGTGCCCCCAGAAGAAT+CGG + chr8.3:19426124-19426143 None:intergenic 50.0%
CCGAGAAAATATGCAGCGGA+TGG - chr8.3:19422987-19423006 MS.gene71892:intron 50.0%
GAAAGAATGCATACCGCTCG+AGG + chr8.3:19426063-19426082 None:intergenic 50.0%
GAGTCGAGAAAAGTGGTAGG+AGG + chr8.3:19424457-19424476 None:intergenic 50.0%
GCATCATGGTCGGCACATAT+CGG + chr8.3:19424137-19424156 None:intergenic 50.0%
GGGCAGTGTATTGTGTCAAG+AGG - chr8.3:19423660-19423679 MS.gene71892:intron 50.0%
GTGCCAGAGAAGAAGAAGAG+AGG - chr8.3:19422960-19422979 MS.gene71892:CDS 50.0%
GTGTCTTTGGCAAGTCCTGA+TGG - chr8.3:19426419-19426438 MS.gene71892:intron 50.0%
GTGTTGTGCTGTGGTGTGTT+TGG - chr8.3:19423246-19423265 MS.gene71892:intron 50.0%
TCCGCCGTGAAATCAATCAC+CGG + chr8.3:19423068-19423087 None:intergenic 50.0%
TGCATGCAATCTACCGGTGT+TGG - chr8.3:19424755-19424774 MS.gene71892:intron 50.0%
TTCGTCAGCCCGATTCTTCT+GGG - chr8.3:19426112-19426131 MS.gene71892:intron 50.0%
! AGTCCTGATGGACGTGTTGT+TGG - chr8.3:19426431-19426450 MS.gene71892:intron 50.0%
! TGGGGGCACATTGACATATG+AGG - chr8.3:19426131-19426150 MS.gene71892:intron 50.0%
! TGGTGTTAGTGGTGGCGTTA+CGG - chr8.3:19422770-19422789 MS.gene71892:CDS 50.0%
!! AGGAGTAGCTGGTTTGTTGG+TGG - chr8.3:19426457-19426476 MS.gene71892:intron 50.0%
!! CAATCTACCGGTGTTGGTGA+AGG - chr8.3:19424761-19424780 MS.gene71892:intron 50.0%
!! TGGAGGAGTAGCTGGTTTGT+TGG - chr8.3:19426454-19426473 MS.gene71892:intron 50.0%
AAGTGGCTTCCGAGGCGTAT+CGG - chr8.3:19424110-19424129 MS.gene71892:intron 55.0%
AGCGGATGGTTCAGTGACAG+CGG - chr8.3:19423001-19423020 MS.gene71892:intron 55.0%
AGGCGGCATGAGTGTGTCTT+TGG - chr8.3:19426406-19426425 MS.gene71892:intron 55.0%
CAGTGCAGCAGCAATCTGAG+AGG + chr8.3:19425431-19425450 None:intergenic 55.0%
CCACCAACAACACGTCCATC+AGG + chr8.3:19426437-19426456 None:intergenic 55.0%
CTTCGTCAGCCCGATTCTTC+TGG - chr8.3:19426111-19426130 MS.gene71892:intron 55.0%
GAATGGGTCCCTTGCTCTGT+TGG - chr8.3:19425702-19425721 MS.gene71892:intron 55.0%
GACAACCAAACTCCGACCAC+CGG - chr8.3:19422840-19422859 MS.gene71892:CDS 55.0%
GCCGTGAAATCAATCACCGG+CGG + chr8.3:19423065-19423084 None:intergenic 55.0%
GGAACACGAAGCAGATCAGG+CGG - chr8.3:19426389-19426408 MS.gene71892:intron 55.0%
GGAGGAACACGAAGCAGATC+AGG - chr8.3:19426386-19426405 MS.gene71892:intron 55.0%
GTAGGGATGGGAACAACAGC+AGG + chr8.3:19426997-19427016 None:intergenic 55.0%
TCCGCAACAACCGCCGTATA+CGG - chr8.3:19422905-19422924 MS.gene71892:CDS 55.0%
TCGTCAGCCCGATTCTTCTG+GGG - chr8.3:19426113-19426132 MS.gene71892:intron 55.0%
TGTCTGTTCTTGGAGCCACG+TGG + chr8.3:19422824-19422843 None:intergenic 55.0%
TTCTCAGCAAGGACCTCGAG+CGG - chr8.3:19426047-19426066 MS.gene71892:intron 55.0%
TTGGTCTGCTGTGCCAGCAT+CGG - chr8.3:19427068-19427087 MS.gene71892:CDS 55.0%
! AGCGGTTCAGCTTTTAGCGG+CGG - chr8.3:19422866-19422885 MS.gene71892:CDS 55.0%
! CCTGATGGACGTGTTGTTGG+TGG - chr8.3:19426434-19426453 MS.gene71892:intron 55.0%
! CTTTTAGCGGCGGTTCAAGC+AGG - chr8.3:19422876-19422895 MS.gene71892:CDS 55.0%
! GAGGCTAGTGGTGGTGTTAG+TGG - chr8.3:19422759-19422778 MS.gene71892:CDS 55.0%
! GATGGACGTGTTGTTGGTGG+AGG - chr8.3:19426437-19426456 MS.gene71892:intron 55.0%
! GCCGCCGGTGATTGATTTCA+CGG - chr8.3:19423061-19423080 MS.gene71892:intron 55.0%
! GCCGGTGATTGATTTCACGG+CGG - chr8.3:19423064-19423083 MS.gene71892:intron 55.0%
! GCTAGTGGTGGTGTTAGTGG+TGG - chr8.3:19422762-19422781 MS.gene71892:CDS 55.0%
! GTTGTTGGTGGAGGAGTAGC+TGG - chr8.3:19426446-19426465 MS.gene71892:intron 55.0%
! TGTGCCAGCATCGGATGCAA+AGG - chr8.3:19427077-19427096 MS.gene71892:CDS 55.0%
! TGTTAGTGGTGGCGTTACGG+TGG - chr8.3:19422773-19422792 MS.gene71892:CDS 55.0%
!! GCAGACGACGATATCGGCTT+CGG + chr8.3:19423035-19423054 None:intergenic 55.0%
!! TCTACCGGTGTTGGTGAAGG+AGG - chr8.3:19424764-19424783 MS.gene71892:intron 55.0%
AACTCCGACCACCGGATCAG+CGG - chr8.3:19422848-19422867 MS.gene71892:CDS 60.0%
AAGCTGAACCGCTGATCCGG+TGG + chr8.3:19422859-19422878 None:intergenic 60.0%
AGTGGCTTCCGAGGCGTATC+GGG - chr8.3:19424111-19424130 MS.gene71892:intron 60.0%
CATATCGGCCCGATACGCCT+CGG + chr8.3:19424122-19424141 None:intergenic 60.0%
CGTCAGCCCGATTCTTCTGG+GGG - chr8.3:19426114-19426133 MS.gene71892:intron 60.0%
CTGATCCGGTGGTCGGAGTT+TGG + chr8.3:19422848-19422867 None:intergenic 60.0%
GCAACAACCGCCGTATACGG+CGG - chr8.3:19422908-19422927 MS.gene71892:CDS 60.0%
GCCGTATACGGCGGTGGTAA+CGG - chr8.3:19422917-19422936 MS.gene71892:CDS 60.0%
GCCGTATACGGCGGTTGTTG+CGG + chr8.3:19422909-19422928 None:intergenic 60.0%
GCCGTTACCACCGCCGTATA+CGG + chr8.3:19422921-19422940 None:intergenic 60.0%
GGCGTGATTCAAGTGGTCGG+TGG - chr8.3:19426596-19426615 MS.gene71892:intron 60.0%
GGTCGGATCAGATGCTCCGT+CGG - chr8.3:19422794-19422813 MS.gene71892:CDS 60.0%
GTATACGGCGGTTGTTGCGG+AGG + chr8.3:19422906-19422925 None:intergenic 60.0%
GTTACCACCGCCGTATACGG+CGG + chr8.3:19422918-19422937 None:intergenic 60.0%
TCTGGCACCGTCGTAACTGC+CGG + chr8.3:19422948-19422967 None:intergenic 60.0%
TGAACCGCTGATCCGGTGGT+CGG + chr8.3:19422855-19422874 None:intergenic 60.0%
! AGTGGTGGCGTTACGGTGGT+CGG - chr8.3:19422777-19422796 MS.gene71892:CDS 60.0%
ACAACCGCCGTATACGGCGG+TGG - chr8.3:19422911-19422930 MS.gene71892:CDS 65.0%
GGAGCCACGTGGTACTCCGA+CGG + chr8.3:19422813-19422832 None:intergenic 65.0%
GGCGTCTCCGGCAGTTACGA+CGG - chr8.3:19422938-19422957 MS.gene71892:CDS 65.0%
GGTGGCTGCAAGTCCAGTGC+AGG - chr8.3:19426475-19426494 MS.gene71892:intron 65.0%
! TGCTCCGTCGGAGTACCACG+TGG - chr8.3:19422806-19422825 MS.gene71892:CDS 65.0%
GTCGTCTGCTCCGTTGCCGC+CGG - chr8.3:19423046-19423065 MS.gene71892:intron 70.0%
!! GGCGGTGGTAACGGCGTCTC+CGG - chr8.3:19422926-19422945 MS.gene71892:CDS 70.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 19422756 19427143 19422756 ID=MS.gene71892
chr8.3 mRNA 19422756 19427143 19422756 ID=MS.gene71892.t1;Parent=MS.gene71892
chr8.3 exon 19426747 19427143 19426747 ID=MS.gene71892.t1.exon1;Parent=MS.gene71892.t1
chr8.3 CDS 19426747 19427143 19426747 ID=cds.MS.gene71892.t1;Parent=MS.gene71892.t1
chr8.3 exon 19424132 19424199 19424132 ID=MS.gene71892.t1.exon2;Parent=MS.gene71892.t1
chr8.3 CDS 19424132 19424199 19424132 ID=cds.MS.gene71892.t1;Parent=MS.gene71892.t1
chr8.3 exon 19423747 19423878 19423747 ID=MS.gene71892.t1.exon3;Parent=MS.gene71892.t1
chr8.3 CDS 19423747 19423878 19423747 ID=cds.MS.gene71892.t1;Parent=MS.gene71892.t1
chr8.3 exon 19423403 19423567 19423403 ID=MS.gene71892.t1.exon4;Parent=MS.gene71892.t1
chr8.3 CDS 19423403 19423567 19423403 ID=cds.MS.gene71892.t1;Parent=MS.gene71892.t1
chr8.3 exon 19422756 19422992 19422756 ID=MS.gene71892.t1.exon5;Parent=MS.gene71892.t1
chr8.3 CDS 19422756 19422992 19422756 ID=cds.MS.gene71892.t1;Parent=MS.gene71892.t1
Gene Sequence

>MS.gene71892

ATGGAGGCTAGTGGTGGTGTTAGTGGTGGCGTTACGGTGGTCGGATCAGATGCTCCGTCGGAGTACCACGTGGCTCCAAGAACAGACAACCAAACTCCGACCACCGGATCAGCGGTTCAGCTTTTAGCGGCGGTTCAAGCAGGTGCTCCTCCGCAACAACCGCCGTATACGGCGGTGGTAACGGCGTCTCCGGCAGTTACGACGGTGCCAGAGAAGAAGAAGAGAGGAAGACCGAGAAAATATGCAGCGGATGGTTCAGTGACAGCGGCGCTGTCTCCGAAGCCGATATCGTCGTCTGCTCCGTTGCCGCCGGTGATTGATTTCACGGCGGAGAAGCGTGCAAAAGTAAAGCCAGTTAGCTCTGTGAGCAAAACGAAATTTGAGTTGGAAAATATAGGTACTGCTTCTAACTAGAATATCTCTCTTTTTTTTGTCTACTTTTTAGTTTATTTTTGAAAAAATTCAGTGTGAAATGTTACTGTTTTGGATTGTGTTGTGCTGTGGTGTGTTTGGTTCTCTGTTGTTTGTGTAGTTAGAAATTTGTAATCAGTGTTTGACTTATGTTTATAGCTTATGTGGAAGTGAGTTCAGATTCAGATGTGGGACCTCAATAGTTGTGGTCTACTCTTGATAATGTGAGGTAGTCCTCAAAAGTGACTTAATGTTTGGAACTAAAATCTTTCCAATTCTAGGTATTATGTTCGAATGACGCTGAGTTTGACTAAATCACGGTGTCACCATAGTTTTTTATTTTTTGTAAAAAAAAAATTACAGTGACATACTTATTATAATTATGCGAAATTCACCGTCAATTCAAACATACCGTATGTTAGGCTAGAAATATGCAACTGATGTTTAACACTTTGGATTGAGTTGTTGAATTGAAAGACTTAAATATTATTGCGGGCAGTGTATTGTGTCAAGAGGTCAAGTTGACATCTGTTCCTCTTTTGGTCTTTTGTGGTCAACTCTATTTACTACTATTATTAGTAATAGTTAGTTGATACTGTTAAGTGGTTCTTCATTCCATTACAGCTTACTTGCTGATATGGACTGTTATGAACTTATGATACTCATACGTGCAAATAAATCTTGTCCTATGATTAAATTAAATTAAATTAAATTAAATTAAATGGGATACTAACTATTTGGCCGCAAAGTGTAAGCATAATGATGAAGCTGGAAGTCAACTTTTCAGCTTAAAAATAGCCCAAGAAATTTGCAATTGCCTAAGCTTCATTGAGTTGTTTTTTGTGTATGAGATGGTAATAATATTCAATGTGTATTGAATATGCATAGTTCTACAAACTAGTTTTCATATTGTAGTAGTAATCTCAGAAGCACGGATACACTAAAGTGGCTTCCGAGGCGTATCGGGCCGATATGTGCCGACCATGATGCTGATATAACTCGGAAAATACCGCGATACAGTCAATTCATCTCATGTGTTCGGTTTTCTAGTACATGAATTAAACTTTCCTCCTCCTTAATTGATACTATCTAATTACATCCTCTCTCTTCTTTAATTGATACATGTAAATTGTGATGTATCTATACAATTCCACGGTTATCAATTGTCAATTTTCAAAATTGGTTTTTTCCAATGATCCCATTACCAATTTGCTCATTCAATTTCACGTTAACCAAATTCAATTTTCAATATTCTGATGCACCCATGTACTAATATATGACCATTGACCTCCTACCACTTTTCTCGACTCCTTTTTTCAAAATTGCACTAAGACACTGCACTACAATTATCAAGAGGAGACAGAGAGACATCTAGAACCAAAAGCAACACAATGTCAGAAGCAACTTCGAATTCCAACACTATAATTCTAAGTAAGTTTCTTTATGAAAATGTTTTACAAGATGATAATGCTCCTCTTTTGGCCTATGTCAGTAAGTTCTTACTATAAAGTAAAAACTCATTTGTTGAGAATTTATGGAACTGAAACTTCTGTGTGTCTTAATGTAAATGATGAGTATTTGTCTGAGTTGCATGCAATCTACCGGTGTTGGTGAAGGAGGAGATGAAATTAATACTATTTCAATATCTTAGTTTGGATTTTTCGAAGACCATGTTAAAAACTGTGTACTGAGTTTTGGAAGATAATGATTTACAATTTCTATTTTATATTTTACTAATGGTTAAGAGCTATGTTTTTAATTTAATTTTCTTAAGTTGAAATATTATATTTATTAGTATATTTTATATATGTATCGTATCCTATAATTTTCAATGAATGACGAATCGCCGTATCGGATGTGTATTGTATCTGATACTCGTTTCTTGTCTGTGATTCATAGGTAGTATTGTTATTTTTAATCTATAATTCCTTTTTTTCCATACATTGTTTTGAGTTAATTCTTTTTTTCCATACATTGTTTTGAGTTAATTCAAATATGATCTTCCCTTTTTGTTTAACTTTTAATTCTCGTAAGCTTCTAAATTTGCTAATTGGATGAAGCTTATTTCCCAAATTTCTGCTTTTACATATGTGCACCAACTTAAAACTTTAGCTTTGTAATTCTCTAAAAATTTGGTTGATGTCTGAGTCTGACATATATGATATGATGTAGAGTTTTGAAACACTTATTTACAAATAATAAAATAGCATTTAGTTTCATATTAAATGGTTTTCCTTGACTACCTGATATAAGATATTTACCCTCTCAGATTGCTGCTGCACTGTACATTCTATGCTGTCTTATATATTAGGACTAAAATGATATAAAGCATCTTGAGATGGACTTAAAAGATTATTCTCTTAGAATCTTATTCTCTTAGGACAAAAGCATAGTGATGTTTCAACTTTTTATTAGATCTAAATATTCAAATTCTTAATTTGGCCAAAATTATAGACGCCTTATAATTGAAACGCCGAGACTTTTATCATTTTCAATTTGATTATTAATTATTGTTAACATTTACATTTTTTAGGTGAATGGGTCCCTTGCTCTGTTGGTTCAAATTTTACACCCCACATCATCACTGTTAATGCTGGAGAGGTAATTTTCAGAAATATCTATTGACTATGCTGTAATCCTGTTATTTGGGGAATTGAAAAGTCTTATTTACATGCATGTTTTTTGTAGAATAAAATTAGGGACTAATTATAAACAGAATAAAAGTGAGAGGGAGCATTTAGTAACATGTTAATTTCCTGTCATATCTGTGTGATCACTTACTTCTTTTTCAGTGATAACTGGAAAATAGTCTAACTGATGATTGTCAGCAATTTTGTGTGTATGGTTATGTTAGGATGTTACCATGAAGGTTATTTCATTTTCTCAGCAAGGACCTCGAGCGGTATGCATTCTTTCAGCAAATGGTGTCATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGTGAAGCATTTGTGCAAATTTTTATTATCATTCCATCTTATAGAAGAGAACTTTCATTTGGTTCCACAATGCATTTAATGATCTACACAGTTCAAGAATGTTGTTTCTCGTGCCTTTTTGAGCATATAGTGGGATTGGATTATTTGCACGCACAGTTACTTATCTCGGTGTTTCTACAGGGACTGTTTGAAATTCTGTCTTTATCTGGTTCGTTCATGCCAAATGAAAGTGGAGGAGGAACACGAAGCAGATCAGGCGGCATGAGTGTGTCTTTGGCAAGTCCTGATGGACGTGTTGTTGGTGGAGGAGTAGCTGGTTTGTTGGTGGCTGCAAGTCCAGTGCAGGTATTTATTCTATCCGTAAGGGAGAATTTTGCAAATTAAAAGTGAAATAATAAATAAAAACAAAAACATTATTTCAAATTGAATGAACCTTTTTAATTTGGCGTGATTCAAGTGGTCGGTGGTTTGAGTCTCTTAAGCATGTGGTCATGGTTCAATCTCTAACTCATTTGTATTAAAATTCACCATTTGAGAAAGATAACTCTTAACTGCGCTTCGAATTTTCGAATAAATTTGATGCAGTTGCACGCATTTCTAGAAAACAAACCTTACAATGACAACTCCATTTCTAGCAAACAAACATTCAATGGCAACTCAATTATAGCAACATGAATAAGCTGGTGATTTAGTATTTACTCGATAACAAGTTTGTTTGATTCTGATCATTCCAATTTCAAACATGTATCTACCAGGTAGTGGTTGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCCAAGAAATCAGAAGCATGATGTGGTATCAACCGTGTCATCTCCTGCTGTTGTTCCCATCCCTACTCTTGATCCAGTACCTATTCTATCATCAGTAACTTCCTTCCGTGGAGATAATTGGTCTGCTGTGCCAGCATCGGATGCAAAGGATAAGCCCGCTGCTGATATTAATGTGTCTCTTCCTGGAGGCTAA
Protein sequence

>MS.gene71892.t1

MEASGGVSGGVTVVGSDAPSEYHVAPRTDNQTPTTGSAVQLLAAVQAGAPPQQPPYTAVVTASPAVTTVPEKKKRGRPRKYAADGSVTAALSPKPISSSAPLPPVIDFTAEKRAKVKPVSSVSKTKFELENIGEWVPCSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRAVCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFMPNESGGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKPRNQKHDVVSTVSSPAVVPIPTLDPVPILSSVTSFRGDNWSAVPASDAKDKPAADINVSLPGG