Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71997.t1 | GAU48229.1 | 94.8 | 231 | 11 | 1 | 1 | 231 | 1 | 230 | 3.20E-113 | 417.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71997.t1 | Q9LD45 | 74.5 | 231 | 57 | 1 | 1 | 231 | 1 | 229 | 4.4e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71997.t1 | A0A2Z6PN70 | 94.8 | 231 | 11 | 1 | 1 | 231 | 1 | 230 | 2.3e-113 | 417.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39943 | MS.gene71997 | PPI |
| MS.gene50537 | MS.gene71997 | PPI |
| MS.gene71997 | MS.gene49377 | PPI |
| MS.gene71997 | MS.gene036189 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71997.t1 | MTR_5g013340 | 74.486 | 243 | 57 | 1 | 1 | 243 | 1 | 238 | 1.00e-126 | 359 |
| MS.gene71997.t1 | MTR_5g013340 | 73.077 | 182 | 44 | 1 | 1 | 182 | 1 | 177 | 5.36e-89 | 262 |
| MS.gene71997.t1 | MTR_6g083250 | 60.127 | 158 | 60 | 1 | 18 | 172 | 3 | 160 | 5.55e-65 | 200 |
| MS.gene71997.t1 | MTR_4g099430 | 67.262 | 168 | 25 | 5 | 16 | 181 | 26 | 165 | 5.04e-48 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71997.t1 | AT5G47120 | 74.059 | 239 | 60 | 1 | 1 | 239 | 1 | 237 | 3.71e-122 | 348 |
| MS.gene71997.t1 | AT4G17580 | 52.459 | 244 | 99 | 3 | 19 | 249 | 8 | 247 | 2.46e-79 | 239 |
| MS.gene71997.t1 | AT5G47130 | 48.018 | 227 | 114 | 3 | 22 | 247 | 2 | 225 | 9.96e-71 | 216 |
| MS.gene71997.t1 | AT5G47130 | 47.847 | 209 | 105 | 3 | 40 | 247 | 2 | 207 | 6.62e-62 | 193 |
| MS.gene71997.t1 | AT5G47130 | 46.774 | 186 | 95 | 3 | 63 | 247 | 4 | 186 | 7.16e-53 | 169 |
Find 60 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTTTGCAGTTGTATTT+TGG | 0.086503 | 8.1:+22870196 | MS.gene71997:intron |
| GATGGCTTCCGCTCTGTTTC+AGG | 0.112158 | 8.1:+22869405 | MS.gene71997:CDS |
| CTTGGTGGCTTGCTTTCTTC+TGG | 0.117176 | 8.1:+22869984 | MS.gene71997:CDS |
| GAGCATTTCTTCATGTATTA+TGG | 0.171606 | 8.1:+22869166 | MS.gene71997:CDS |
| CTGTTTCAGGGTGCCTCTAT+TGG | 0.219600 | 8.1:+22869418 | MS.gene71997:CDS |
| CTCACTACACTCGCCTGTTT+TGG | 0.230680 | 8.1:+22869204 | MS.gene71997:CDS |
| TGGCTATTGCTATCGATTCT+AGG | 0.248458 | 8.1:+22869455 | MS.gene71997:CDS |
| CTTCATGTATTATGGAATAT+TGG | 0.281802 | 8.1:+22869174 | MS.gene71997:CDS |
| TATTGGACCCTTGATTGATT+TGG | 0.290110 | 8.1:+22869435 | MS.gene71997:CDS |
| GAGCCCTTTCAATTATTTCT+TGG | 0.293452 | 8.1:-22870255 | None:intergenic |
| ATAATTGAAAGGGCTCATTT+TGG | 0.300174 | 8.1:+22870262 | MS.gene71997:CDS |
| CACATTTGTGGCAACTTCCT+TGG | 0.311725 | 8.1:+22869905 | MS.gene71997:CDS |
| TGTACGGATTCTTGTTATAT+TGG | 0.311859 | 8.1:+22870342 | MS.gene71997:CDS |
| AAAGAGGTTGTCTTTGTTGA+TGG | 0.349341 | 8.1:+22869387 | MS.gene71997:CDS |
| TACTGCACTCTTTAAGTTTG+AGG | 0.357711 | 8.1:+22870058 | MS.gene71997:CDS |
| TTGGTGGCTTGCTTTCTTCT+GGG | 0.360140 | 8.1:+22869985 | MS.gene71997:CDS |
| GCTATTGCTGCTTCAGCTGT+TGG | 0.373114 | 8.1:+22869144 | MS.gene71997:CDS |
| AGCCCTTTCAATTATTTCTT+GGG | 0.377783 | 8.1:-22870254 | None:intergenic |
| CCAAATGATGGTTCCAAAAC+AGG | 0.378513 | 8.1:-22869217 | None:intergenic |
| TTGCAGCTAAATCAGTGAAC+AGG | 0.391119 | 8.1:-22870315 | None:intergenic |
| ATGTTTCTCAGCAGCAGCTT+TGG | 0.392700 | 8.1:+22869935 | MS.gene71997:CDS |
| CAGCTTTGGTTGCGAGGCGT+AGG | 0.408062 | 8.1:+22869949 | MS.gene71997:CDS |
| ATGGCTTCCGCTCTGTTTCA+GGG | 0.410687 | 8.1:+22869406 | MS.gene71997:CDS |
| CCACAAATGTGGTAAGGATT+AGG | 0.413130 | 8.1:-22869893 | None:intergenic |
| TAAATTCATACCTCTTCAAA+AGG | 0.427460 | 8.1:-22869255 | None:intergenic |
| CTGGGTTGTCTATTCTTATG+TGG | 0.428747 | 8.1:+22870003 | MS.gene71997:CDS |
| CCTAATCCTTACCACATTTG+TGG | 0.443553 | 8.1:+22869893 | MS.gene71997:CDS |
| TTTGCTTCCTCTGTCTTTGG+TGG | 0.444710 | 8.1:+22870032 | MS.gene71997:CDS |
| CAGCAGCAGCTTTGGTTGCG+AGG | 0.467819 | 8.1:+22869943 | MS.gene71997:CDS |
| CACCCAAGAAATAATTGAAA+GGG | 0.472931 | 8.1:+22870252 | MS.gene71997:CDS |
| AGCAATAGCCAAATCAATCA+AGG | 0.473775 | 8.1:-22869443 | None:intergenic |
| ATCAATCAAGGGTCCAATAG+AGG | 0.481600 | 8.1:-22869431 | None:intergenic |
| TCGTTCAGAATCACATCAAA+CGG | 0.483793 | 8.1:+22869004 | MS.gene71997:CDS |
| TTGATGTGATTCTGAACGAC+GGG | 0.491066 | 8.1:-22869000 | None:intergenic |
| GATTTGACGGAAATTCTTGA+GGG | 0.494951 | 8.1:-22868974 | None:intergenic |
| ATTTAGCTGCAATCTTTGTA+CGG | 0.506119 | 8.1:+22870326 | MS.gene71997:CDS |
| CTTCTTCCTCTAGAAACCGT+TGG | 0.508479 | 8.1:+22868941 | MS.gene71997:CDS |
| CATGTATTATGGAATATTGG+AGG | 0.514242 | 8.1:+22869177 | MS.gene71997:CDS |
| AGCTTTGGTTGCGAGGCGTA+GGG | 0.525893 | 8.1:+22869950 | MS.gene71997:CDS |
| AGATTTGACGGAAATTCTTG+AGG | 0.543851 | 8.1:-22868975 | None:intergenic |
| CGTTCAGAATCACATCAAAC+GGG | 0.545451 | 8.1:+22869005 | MS.gene71997:CDS |
| ACACCCAAGAAATAATTGAA+AGG | 0.554681 | 8.1:+22870251 | MS.gene71997:CDS |
| TGTAGATAACAACCAAATGA+TGG | 0.564410 | 8.1:-22869229 | None:intergenic |
| TGAGGGAATCATAATTCCAA+CGG | 0.564853 | 8.1:-22868957 | None:intergenic |
| CAGAAGAAAGCAAGCCACCA+AGG | 0.571791 | 8.1:-22869983 | None:intergenic |
| AAGTTGCCACAAATGTGGTA+AGG | 0.580524 | 8.1:-22869899 | None:intergenic |
| AGGGAGTATCTCTACCTTGG+TGG | 0.580873 | 8.1:+22869969 | MS.gene71997:CDS |
| CGTAGGGAGTATCTCTACCT+TGG | 0.583177 | 8.1:+22869966 | MS.gene71997:CDS |
| ATTCATACCTCTTCAAAAGG+AGG | 0.586956 | 8.1:-22869252 | None:intergenic |
| TGCTGCTGAGAAACATGCAA+AGG | 0.591246 | 8.1:-22869928 | None:intergenic |
| ATAATTCCAACGGTTTCTAG+AGG | 0.597479 | 8.1:-22868947 | None:intergenic |
| TGAGAAACATGCAAAGGCCA+AGG | 0.602323 | 8.1:-22869922 | None:intergenic |
| CAAGGAAGTTGCCACAAATG+TGG | 0.618201 | 8.1:-22869904 | None:intergenic |
| GCAATAGCCAAATCAATCAA+GGG | 0.625293 | 8.1:-22869442 | None:intergenic |
| TTTGATGTGATTCTGAACGA+CGG | 0.630224 | 8.1:-22869001 | None:intergenic |
| TGCAGCTAAATCAGTGAACA+GGG | 0.632060 | 8.1:-22870314 | None:intergenic |
| AGTAGAACCACCAAAGACAG+AGG | 0.657451 | 8.1:-22870039 | None:intergenic |
| GATGTGATTCTGAACGACGG+GGG | 0.673838 | 8.1:-22868998 | None:intergenic |
| TGATGTGATTCTGAACGACG+GGG | 0.711262 | 8.1:-22868999 | None:intergenic |
| AGAGGCACCCTGAAACAGAG+CGG | 0.755453 | 8.1:-22869413 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATTGAGTAAATTAAAA+TGG | - | chr8.1:22869780-22869799 | None:intergenic | 15.0% |
| !! | TAACTTATGAAAACAGTTTA+TGG | - | chr8.1:22869622-22869641 | None:intergenic | 20.0% |
| !!! | ACTTTTTACGTTTTTTAGTT+TGG | + | chr8.1:22870379-22870398 | MS.gene71997:intron | 20.0% |
| !!! | TTATTGCATTTTGATCATTT+TGG | + | chr8.1:22869509-22869528 | MS.gene71997:intron | 20.0% |
| ! | AATTTATGAGAACAACTTAC+TGG | - | chr8.1:22869697-22869716 | None:intergenic | 25.0% |
| ! | ATGAAAATATTCTTATCCGT+TGG | + | chr8.1:22869087-22869106 | MS.gene71997:intron | 25.0% |
| ! | ATTTAGATATGTTCGATTGA+AGG | - | chr8.1:22869752-22869771 | None:intergenic | 25.0% |
| ! | CTTCATGTATTATGGAATAT+TGG | + | chr8.1:22869174-22869193 | MS.gene71997:CDS | 25.0% |
| ! | TAAATTCATACCTCTTCAAA+AGG | - | chr8.1:22869258-22869277 | None:intergenic | 25.0% |
| ! | TAGTTTGGATTATTCTTTGT+TGG | + | chr8.1:22870394-22870413 | MS.gene71997:intron | 25.0% |
| ! | TATAATTGCTTATCCAAACA+TGG | - | chr8.1:22869549-22869568 | None:intergenic | 25.0% |
| ! | TTGAATAAAACACCTTATTG+AGG | + | chr8.1:22870165-22870184 | MS.gene71997:intron | 25.0% |
| !! | AAAGGCATATAGGATAATAT+AGG | - | chr8.1:22870147-22870166 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAAGTTATCT+TGG | + | chr8.1:22869625-22869644 | MS.gene71997:intron | 25.0% |
| !!! | ATACTGTTAGTTTTGGATTT+TGG | + | chr8.1:22869836-22869855 | MS.gene71997:intron | 25.0% |
| !!! | ATGTTATGTGGTTTGTTATT+GGG | + | chr8.1:22869314-22869333 | MS.gene71997:intron | 25.0% |
| !!! | CAATAAGGTGTTTTATTCAA+AGG | - | chr8.1:22870165-22870184 | None:intergenic | 25.0% |
| !!! | TATGTTATGTGGTTTGTTAT+TGG | + | chr8.1:22869313-22869332 | MS.gene71997:intron | 25.0% |
| !!! | TCATTTTGGTTTTGAGTTTT+TGG | + | chr8.1:22869523-22869542 | MS.gene71997:intron | 25.0% |
| !!! | TGTTTTATTCAAAGGCATAT+AGG | - | chr8.1:22870157-22870176 | None:intergenic | 25.0% |
| !!! | TTGACTTATACTGTTAGTTT+TGG | + | chr8.1:22869829-22869848 | MS.gene71997:intron | 25.0% |
| AACTAATTGTGAGTCTGTTT+GGG | - | chr8.1:22869722-22869741 | None:intergenic | 30.0% | |
| ACACCCAAGAAATAATTGAA+AGG | + | chr8.1:22870251-22870270 | MS.gene71997:CDS | 30.0% | |
| ATGCATGTAGTTATGTTATG+TGG | + | chr8.1:22869302-22869321 | MS.gene71997:intron | 30.0% | |
| ATTTAGCTGCAATCTTTGTA+CGG | + | chr8.1:22870326-22870345 | MS.gene71997:CDS | 30.0% | |
| CACCCAAGAAATAATTGAAA+GGG | + | chr8.1:22870252-22870271 | MS.gene71997:CDS | 30.0% | |
| CATGTATTATGGAATATTGG+AGG | + | chr8.1:22869177-22869196 | MS.gene71997:CDS | 30.0% | |
| GAGCATTTCTTCATGTATTA+TGG | + | chr8.1:22869166-22869185 | MS.gene71997:CDS | 30.0% | |
| TATGTCAATACCAAATCATC+AGG | - | chr8.1:22870421-22870440 | None:intergenic | 30.0% | |
| TGCTACAAACTTAGTGAAAT+TGG | + | chr8.1:22870112-22870131 | MS.gene71997:intron | 30.0% | |
| TGTAGAAACGAAATTGATGA+AGG | - | chr8.1:22869058-22869077 | None:intergenic | 30.0% | |
| TGTAGATAACAACCAAATGA+TGG | - | chr8.1:22869232-22869251 | None:intergenic | 30.0% | |
| ! | AGCCCTTTCAATTATTTCTT+GGG | - | chr8.1:22870257-22870276 | None:intergenic | 30.0% |
| ! | ATAATTGAAAGGGCTCATTT+TGG | + | chr8.1:22870262-22870281 | MS.gene71997:CDS | 30.0% |
| ! | CTTGTTTGCAGTTGTATTTT+GGG | + | chr8.1:22870197-22870216 | MS.gene71997:intron | 30.0% |
| ! | TGTACGGATTCTTGTTATAT+TGG | + | chr8.1:22870342-22870361 | MS.gene71997:CDS | 30.0% |
| ! | TTCTTGTTATATTGGTGAGT+TGG | + | chr8.1:22870350-22870369 | MS.gene71997:intron | 30.0% |
| !! | ATTGGGTTGTTGTAGTATTT+TGG | + | chr8.1:22869331-22869350 | MS.gene71997:intron | 30.0% |
| AAAGAGGTTGTCTTTGTTGA+TGG | + | chr8.1:22869387-22869406 | MS.gene71997:CDS | 35.0% | |
| AACCTGCAATCAATTTCCAA+CGG | - | chr8.1:22869106-22869125 | None:intergenic | 35.0% | |
| AGATTTGACGGAAATTCTTG+AGG | - | chr8.1:22868978-22868997 | None:intergenic | 35.0% | |
| AGCAATAGCCAAATCAATCA+AGG | - | chr8.1:22869446-22869465 | None:intergenic | 35.0% | |
| ATTCATACCTCTTCAAAAGG+AGG | - | chr8.1:22869255-22869274 | None:intergenic | 35.0% | |
| GAACTAATTGTGAGTCTGTT+TGG | - | chr8.1:22869723-22869742 | None:intergenic | 35.0% | |
| GATTTGACGGAAATTCTTGA+GGG | - | chr8.1:22868977-22868996 | None:intergenic | 35.0% | |
| GCAATAGCCAAATCAATCAA+GGG | - | chr8.1:22869445-22869464 | None:intergenic | 35.0% | |
| TATTGGACCCTTGATTGATT+TGG | + | chr8.1:22869435-22869454 | MS.gene71997:CDS | 35.0% | |
| TCGTTCAGAATCACATCAAA+CGG | + | chr8.1:22869004-22869023 | MS.gene71997:CDS | 35.0% | |
| TGAGGGAATCATAATTCCAA+CGG | - | chr8.1:22868960-22868979 | None:intergenic | 35.0% | |
| TTTGATGTGATTCTGAACGA+CGG | - | chr8.1:22869004-22869023 | None:intergenic | 35.0% | |
| ! | ATAATTCCAACGGTTTCTAG+AGG | - | chr8.1:22868950-22868969 | None:intergenic | 35.0% |
| ! | GAGCCCTTTCAATTATTTCT+TGG | - | chr8.1:22870258-22870277 | None:intergenic | 35.0% |
| ! | GCTTGTTTGCAGTTGTATTT+TGG | + | chr8.1:22870196-22870215 | MS.gene71997:intron | 35.0% |
| ! | GTACTTCTTTTCAGCAAAAG+AGG | + | chr8.1:22869371-22869390 | MS.gene71997:intron | 35.0% |
| ! | TACTGCACTCTTTAAGTTTG+AGG | + | chr8.1:22870058-22870077 | MS.gene71997:CDS | 35.0% |
| !! | CTTCTTCCTCTCATTTTTCT+CGG | - | chr8.1:22870478-22870497 | None:intergenic | 35.0% |
| !!! | TTTGAGTTTTTGGCCATGTT+TGG | + | chr8.1:22869533-22869552 | MS.gene71997:intron | 35.0% |
| AAGCAAGCAAGACCTCAATA+AGG | - | chr8.1:22870180-22870199 | None:intergenic | 40.0% | |
| AAGTTGCCACAAATGTGGTA+AGG | - | chr8.1:22869902-22869921 | None:intergenic | 40.0% | |
| ATCAATCAAGGGTCCAATAG+AGG | - | chr8.1:22869434-22869453 | None:intergenic | 40.0% | |
| ATCCGTTGGAAATTGATTGC+AGG | + | chr8.1:22869101-22869120 | MS.gene71997:intron | 40.0% | |
| ATTCAGCCGAGAAAAATGAG+AGG | + | chr8.1:22870469-22870488 | MS.gene71997:CDS | 40.0% | |
| CCAAATGATGGTTCCAAAAC+AGG | - | chr8.1:22869220-22869239 | None:intergenic | 40.0% | |
| CCACAAATGTGGTAAGGATT+AGG | - | chr8.1:22869896-22869915 | None:intergenic | 40.0% | |
| CCTAATCCTTACCACATTTG+TGG | + | chr8.1:22869893-22869912 | MS.gene71997:CDS | 40.0% | |
| CGTTCAGAATCACATCAAAC+GGG | + | chr8.1:22869005-22869024 | MS.gene71997:CDS | 40.0% | |
| CTGGGTTGTCTATTCTTATG+TGG | + | chr8.1:22870003-22870022 | MS.gene71997:CDS | 40.0% | |
| CTTTGTTGGTCCTGATGATT+TGG | + | chr8.1:22870408-22870427 | MS.gene71997:intron | 40.0% | |
| TGCAGCTAAATCAGTGAACA+GGG | - | chr8.1:22870317-22870336 | None:intergenic | 40.0% | |
| TTGATGTGATTCTGAACGAC+GGG | - | chr8.1:22869003-22869022 | None:intergenic | 40.0% | |
| TTGCAGCTAAATCAGTGAAC+AGG | - | chr8.1:22870318-22870337 | None:intergenic | 40.0% | |
| ! | CATTTTGCTTCCTCTGTCTT+TGG | + | chr8.1:22870029-22870048 | MS.gene71997:CDS | 40.0% |
| !! | ATCTACACCTCCTTTTGAAG+AGG | + | chr8.1:22869245-22869264 | MS.gene71997:CDS | 40.0% |
| !! | GCAGTTGTATTTTGGGCTTT+TGG | + | chr8.1:22870204-22870223 | MS.gene71997:intron | 40.0% |
| !! | TGGCTATTGCTATCGATTCT+AGG | + | chr8.1:22869455-22869474 | MS.gene71997:CDS | 40.0% |
| !!! | CCTGTTTTGGAACCATCATT+TGG | + | chr8.1:22869217-22869236 | MS.gene71997:CDS | 40.0% |
| !!! | TTTGGGCTTTTGGTGTTTGT+GGG | + | chr8.1:22870214-22870233 | MS.gene71997:CDS | 40.0% |
| !!! | TTTTGGGCTTTTGGTGTTTG+TGG | + | chr8.1:22870213-22870232 | MS.gene71997:CDS | 40.0% |
| AGTAGAACCACCAAAGACAG+AGG | - | chr8.1:22870042-22870061 | None:intergenic | 45.0% | |
| ATGTTTCTCAGCAGCAGCTT+TGG | + | chr8.1:22869935-22869954 | MS.gene71997:CDS | 45.0% | |
| CAAGGAAGTTGCCACAAATG+TGG | - | chr8.1:22869907-22869926 | None:intergenic | 45.0% | |
| CACATTTGTGGCAACTTCCT+TGG | + | chr8.1:22869905-22869924 | MS.gene71997:CDS | 45.0% | |
| TGAGAAACATGCAAAGGCCA+AGG | - | chr8.1:22869925-22869944 | None:intergenic | 45.0% | |
| TGATGTGATTCTGAACGACG+GGG | - | chr8.1:22869002-22869021 | None:intergenic | 45.0% | |
| TGCTGCTGAGAAACATGCAA+AGG | - | chr8.1:22869931-22869950 | None:intergenic | 45.0% | |
| TTTGCTTCCTCTGTCTTTGG+TGG | + | chr8.1:22870032-22870051 | MS.gene71997:CDS | 45.0% | |
| ! | CTTCTTCCTCTAGAAACCGT+TGG | + | chr8.1:22868941-22868960 | MS.gene71997:CDS | 45.0% |
| !! | AAGGGCTCATTTTGGTGATC+TGG | + | chr8.1:22870270-22870289 | MS.gene71997:CDS | 45.0% |
| !! | TTGGTGGCTTGCTTTCTTCT+GGG | + | chr8.1:22869985-22870004 | MS.gene71997:CDS | 45.0% |
| ATGGCTTCCGCTCTGTTTCA+GGG | + | chr8.1:22869406-22869425 | MS.gene71997:CDS | 50.0% | |
| CAGAAGAAAGCAAGCCACCA+AGG | - | chr8.1:22869986-22870005 | None:intergenic | 50.0% | |
| GATGTGATTCTGAACGACGG+GGG | - | chr8.1:22869001-22869020 | None:intergenic | 50.0% | |
| ! | CTCACTACACTCGCCTGTTT+TGG | + | chr8.1:22869204-22869223 | MS.gene71997:CDS | 50.0% |
| ! | CTGTTTCAGGGTGCCTCTAT+TGG | + | chr8.1:22869418-22869437 | MS.gene71997:CDS | 50.0% |
| ! | GCTATTGCTGCTTCAGCTGT+TGG | + | chr8.1:22869144-22869163 | MS.gene71997:CDS | 50.0% |
| !! | AGGGAGTATCTCTACCTTGG+TGG | + | chr8.1:22869969-22869988 | MS.gene71997:CDS | 50.0% |
| !! | CGTAGGGAGTATCTCTACCT+TGG | + | chr8.1:22869966-22869985 | MS.gene71997:CDS | 50.0% |
| !! | CTTGGTGGCTTGCTTTCTTC+TGG | + | chr8.1:22869984-22870003 | MS.gene71997:CDS | 50.0% |
| GAACGACGGGGGAGATTTGA+CGG | - | chr8.1:22868990-22869009 | None:intergenic | 55.0% | |
| GATGGCTTCCGCTCTGTTTC+AGG | + | chr8.1:22869405-22869424 | MS.gene71997:CDS | 55.0% | |
| ! | AGCTTTGGTTGCGAGGCGTA+GGG | + | chr8.1:22869950-22869969 | MS.gene71997:CDS | 55.0% |
| !! | AGAGGCACCCTGAAACAGAG+CGG | - | chr8.1:22869416-22869435 | None:intergenic | 55.0% |
| ! | CAGCAGCAGCTTTGGTTGCG+AGG | + | chr8.1:22869943-22869962 | MS.gene71997:CDS | 60.0% |
| ! | CAGCTTTGGTTGCGAGGCGT+AGG | + | chr8.1:22869949-22869968 | MS.gene71997:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 22868907 | 22870512 | 22868907 | ID=MS.gene71997 |
| chr8.1 | mRNA | 22868907 | 22870512 | 22868907 | ID=MS.gene71997.t1;Parent=MS.gene71997 |
| chr8.1 | exon | 22868907 | 22869026 | 22868907 | ID=MS.gene71997.t1.exon1;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22868907 | 22869026 | 22868907 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| chr8.1 | exon | 22869123 | 22869266 | 22869123 | ID=MS.gene71997.t1.exon2;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22869123 | 22869266 | 22869123 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| chr8.1 | exon | 22869385 | 22869476 | 22869385 | ID=MS.gene71997.t1.exon3;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22869385 | 22869476 | 22869385 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| chr8.1 | exon | 22869893 | 22870079 | 22869893 | ID=MS.gene71997.t1.exon4;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22869893 | 22870079 | 22869893 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| chr8.1 | exon | 22870208 | 22870363 | 22870208 | ID=MS.gene71997.t1.exon5;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22870208 | 22870363 | 22870208 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| chr8.1 | exon | 22870462 | 22870512 | 22870462 | ID=MS.gene71997.t1.exon6;Parent=MS.gene71997.t1 |
| chr8.1 | CDS | 22870462 | 22870512 | 22870462 | ID=cds.MS.gene71997.t1;Parent=MS.gene71997.t1 |
| Gene Sequence |
| Protein sequence |
