Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72217.t1 | XP_003624554.2 | 99.1 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 1.80E-202 | 714.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72217.t1 | Q9LPV9 | 90.9 | 352 | 26 | 1 | 1 | 352 | 1 | 346 | 6.3e-188 | 657.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72217.t1 | G7KYC1 | 99.1 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 1.3e-202 | 714.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06600 | MS.gene72217 | PPI |
| MS.gene06812 | MS.gene72217 | PPI |
| MS.gene057254 | MS.gene72217 | PPI |
| MS.gene013494 | MS.gene72217 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72217.t1 | MTR_7g084810 | 99.148 | 352 | 3 | 0 | 1 | 352 | 1 | 352 | 0.0 | 720 |
| MS.gene72217.t1 | MTR_3g092840 | 61.493 | 335 | 114 | 5 | 23 | 352 | 18 | 342 | 8.33e-150 | 426 |
| MS.gene72217.t1 | MTR_3g092830 | 55.319 | 94 | 40 | 1 | 259 | 352 | 1 | 92 | 4.90e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72217.t1 | AT1G12910 | 91.477 | 352 | 24 | 2 | 1 | 352 | 1 | 346 | 0.0 | 664 |
| MS.gene72217.t1 | AT3G26640 | 86.080 | 352 | 43 | 2 | 1 | 352 | 1 | 346 | 0.0 | 624 |
| MS.gene72217.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene72217.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene72217.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene72217.t1 | AT5G24520 | 62.069 | 348 | 118 | 6 | 10 | 352 | 3 | 341 | 1.01e-155 | 441 |
| MS.gene72217.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.56e-11 | 65.5 |
| MS.gene72217.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.56e-11 | 65.5 |
| MS.gene72217.t1 | AT1G18830 | 24.859 | 177 | 114 | 4 | 138 | 302 | 112 | 281 | 2.59e-11 | 65.5 |
| MS.gene72217.t1 | AT4G35050 | 24.444 | 225 | 142 | 10 | 149 | 352 | 177 | 394 | 5.82e-11 | 63.9 |
Find 101 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGACTAAGCTTCAGATTCTT+AGG | 0.130906 | 7.2:+22884487 | MS.gene72217:CDS |
| TTCCAATCAAAAGAAGTAAT+TGG | 0.178566 | 7.2:-22883883 | None:intergenic |
| CCTCCGATTTCCTCCGTATT+TGG | 0.189798 | 7.2:+22883767 | MS.gene72217:CDS |
| AGGTGGGCTTGATCCTATTT+TGG | 0.218068 | 7.2:+22884389 | MS.gene72217:CDS |
| TTCAGAACTTTCGTAAATTA+TGG | 0.245041 | 7.2:-22884112 | None:intergenic |
| TGAACGATTTCGACGCGGTT+AGG | 0.301990 | 7.2:-22883619 | None:intergenic |
| GATTTGGGATCTTTCTTCAA+TGG | 0.308847 | 7.2:+22884353 | MS.gene72217:CDS |
| TTTCTGCTGATGGGTCTGTT+AGG | 0.312772 | 7.2:+22884058 | MS.gene72217:CDS |
| GGGCGTTGGCAGTCTTTGTC+AGG | 0.322893 | 7.2:-22883727 | None:intergenic |
| ATGATTCTCAGGCGTTGATT+TGG | 0.327910 | 7.2:+22884337 | MS.gene72217:CDS |
| GAGGAGGTGGCGAGGAGGTC+GGG | 0.337769 | 7.2:-22883748 | None:intergenic |
| GTCTTCTTCTCAGCCTGATT+GGG | 0.338432 | 7.2:+22884449 | MS.gene72217:CDS |
| GGTCTTCTTCTCAGCCTGAT+TGG | 0.338481 | 7.2:+22884448 | MS.gene72217:CDS |
| TGATTCTCAGGCGTTGATTT+GGG | 0.344030 | 7.2:+22884338 | MS.gene72217:CDS |
| TAAACAAGATCCTAGGTATA+TGG | 0.347324 | 7.2:+22884167 | MS.gene72217:CDS |
| ATTTGGGATCTTTCTTCAAT+GGG | 0.351970 | 7.2:+22884354 | MS.gene72217:CDS |
| AGCCTAACCAACGGTGTATC+AGG | 0.360847 | 7.2:-22884135 | None:intergenic |
| CCAGCAGTATAAGCCAAAAT+AGG | 0.361162 | 7.2:-22884402 | None:intergenic |
| GTATATGGCAACGATTATAA+TGG | 0.363636 | 7.2:+22884182 | MS.gene72217:CDS |
| GGATGTTCGAAGGAGAGATT+TGG | 0.364624 | 7.2:-22883676 | None:intergenic |
| ATGGATTTGGTGGGTGGGTA+AGG | 0.374091 | 7.2:-22883697 | None:intergenic |
| GTTGCTCGTCGGAAGTGTCT+TGG | 0.374416 | 7.2:-22883480 | None:intergenic |
| CGACACAACGTGTACCATTT+GGG | 0.395220 | 7.2:+22883942 | MS.gene72217:CDS |
| TCGACACAACGTGTACCATT+TGG | 0.395312 | 7.2:+22883941 | MS.gene72217:CDS |
| GTCAGGGATGAAGATGGATT+TGG | 0.401641 | 7.2:-22883710 | None:intergenic |
| AGGAGGTGGCGAGGAGGTCG+GGG | 0.406903 | 7.2:-22883747 | None:intergenic |
| AAGAGGTTTATGATATAGCT+TGG | 0.407143 | 7.2:+22884010 | MS.gene72217:CDS |
| AGAGGTTTATGATATAGCTT+GGG | 0.414776 | 7.2:+22884011 | MS.gene72217:CDS |
| TTCTGCTGATGGGTCTGTTA+GGG | 0.416523 | 7.2:+22884059 | MS.gene72217:CDS |
| TCAATGGGGCAGCCTGTTGA+AGG | 0.416805 | 7.2:+22884369 | MS.gene72217:CDS |
| TTTGCGTCGGTTTCTGCTGA+TGG | 0.417377 | 7.2:+22884048 | MS.gene72217:CDS |
| CCGCCAAATACGGAGGAAAT+CGG | 0.418339 | 7.2:-22883770 | None:intergenic |
| GAACGATTTCGACGCGGTTA+GGG | 0.418818 | 7.2:-22883618 | None:intergenic |
| CACTGCTGGTGATGATTCTC+AGG | 0.422046 | 7.2:+22884326 | MS.gene72217:CDS |
| TCCAATCAAAAGAAGTAATT+GGG | 0.422669 | 7.2:-22883882 | None:intergenic |
| TTCTTTCTCAATATCCCAAA+TGG | 0.431809 | 7.2:-22883956 | None:intergenic |
| CGTCGGAAGTGTCTTGGGTT+GGG | 0.435334 | 7.2:-22883474 | None:intergenic |
| CTGAGATTGAACAGCTTCAA+TGG | 0.437364 | 7.2:+22884427 | MS.gene72217:CDS |
| TGGCGAGGAGGTCGGGGCGT+TGG | 0.442078 | 7.2:-22883741 | None:intergenic |
| GACTAAGCTTCAGATTCTTA+GGG | 0.451874 | 7.2:+22884488 | MS.gene72217:CDS |
| AAAGCAATAGCAACCCAATC+AGG | 0.452793 | 7.2:-22884462 | None:intergenic |
| CGCAATTAACTGCGTATCAA+CGG | 0.454016 | 7.2:-22883980 | None:intergenic |
| ATGGGGCAGCCTGTTGAAGG+TGG | 0.459832 | 7.2:+22884372 | MS.gene72217:CDS |
| CGACGCTGATTCGTCGGAAT+CGG | 0.459940 | 7.2:-22883797 | None:intergenic |
| TTGCTCGTCGGAAGTGTCTT+GGG | 0.460024 | 7.2:-22883479 | None:intergenic |
| GATATAGCTTGGGGTGGTGT+TGG | 0.461083 | 7.2:+22884021 | MS.gene72217:CDS |
| TTGCGTCGGTTTCTGCTGAT+GGG | 0.464907 | 7.2:+22884049 | MS.gene72217:CDS |
| TCGTCGGAAGTGTCTTGGGT+TGG | 0.465598 | 7.2:-22883475 | None:intergenic |
| GGATCAAGCCCACCTTCAAC+AGG | 0.465837 | 7.2:-22884381 | None:intergenic |
| GAAGCTGAACCACGTCGAAT+CGG | 0.471288 | 7.2:+22883907 | MS.gene72217:CDS |
| GGCACATCTACGCTATGAAC+TGG | 0.475900 | 7.2:+22883539 | MS.gene72217:CDS |
| GTTAATTGCGCATGATAAAG+AGG | 0.479182 | 7.2:+22883993 | MS.gene72217:CDS |
| CCGATTTCCTCCGTATTTGG+CGG | 0.480379 | 7.2:+22883770 | MS.gene72217:CDS |
| GATGTTCGAAGGAGAGATTT+GGG | 0.482799 | 7.2:-22883675 | None:intergenic |
| AATCGGAGATCCGCCAAATA+CGG | 0.485839 | 7.2:-22883780 | None:intergenic |
| GTCTTTGTCAGGGATGAAGA+TGG | 0.492695 | 7.2:-22883716 | None:intergenic |
| CACCGTTGGTTAGGCTAGGT+TGG | 0.498966 | 7.2:+22884142 | MS.gene72217:CDS |
| ACTATGCGGCGCCCACGCTA+TGG | 0.499007 | 7.2:-22884289 | None:intergenic |
| AGGGATGAAGATGGATTTGG+TGG | 0.499516 | 7.2:-22883707 | None:intergenic |
| TCGTGTCATATTTGCACTGC+TGG | 0.500103 | 7.2:+22884312 | MS.gene72217:CDS |
| GGAGGAGGTGGCGAGGAGGT+CGG | 0.504036 | 7.2:-22883749 | None:intergenic |
| GTTGGAATAAACAAGATCCT+AGG | 0.507846 | 7.2:+22884160 | MS.gene72217:CDS |
| ACGGAGGAAATCGGAGGAGG+TGG | 0.513893 | 7.2:-22883761 | None:intergenic |
| GGCGTTGGCAGTCTTTGTCA+GGG | 0.522445 | 7.2:-22883726 | None:intergenic |
| GATTATAATGGATTCTGCTA+AGG | 0.524815 | 7.2:+22884194 | MS.gene72217:CDS |
| ATGAAGATGGATTTGGTGGG+TGG | 0.531828 | 7.2:-22883703 | None:intergenic |
| TGGGGCAGCCTGTTGAAGGT+GGG | 0.536184 | 7.2:+22884373 | MS.gene72217:CDS |
| GAACTCAAAAGTCTTCTCAA+TGG | 0.538802 | 7.2:+22883835 | MS.gene72217:CDS |
| TTCGAAGGAGAGATTTGGGT+CGG | 0.542384 | 7.2:-22883671 | None:intergenic |
| AACCTGATACACCGTTGGTT+AGG | 0.543600 | 7.2:+22884133 | MS.gene72217:CDS |
| GGAAATCGGAGGAGGTGGCG+AGG | 0.553341 | 7.2:-22883756 | None:intergenic |
| CTAAGAGAGAAGCGATAGCG+AGG | 0.568922 | 7.2:-22883588 | None:intergenic |
| AACTCCACCACCGGTAGCGT+TGG | 0.572521 | 7.2:-22884240 | None:intergenic |
| GTCGGATTTGATTTCGCCGG+TGG | 0.588124 | 7.2:-22883653 | None:intergenic |
| TGTCTCTGCAACTCCACCAC+CGG | 0.590157 | 7.2:-22884249 | None:intergenic |
| TGAAGATGGATTTGGTGGGT+GGG | 0.592001 | 7.2:-22883702 | None:intergenic |
| TTCTGAACCTGATACACCGT+TGG | 0.592173 | 7.2:+22884128 | MS.gene72217:CDS |
| AATACGGAGGAAATCGGAGG+AGG | 0.595705 | 7.2:-22883764 | None:intergenic |
| TGGGTCGGATTTGATTTCGC+CGG | 0.599155 | 7.2:-22883656 | None:intergenic |
| AGACTCCGACGCTGATTCGT+CGG | 0.602656 | 7.2:-22883803 | None:intergenic |
| CGGAGATCCGCCAAATACGG+AGG | 0.602926 | 7.2:-22883777 | None:intergenic |
| TTCATAGCGTAGATGTGCCA+TGG | 0.606486 | 7.2:-22883535 | None:intergenic |
| TAGTGTGAATGCCATAGCGT+GGG | 0.611881 | 7.2:+22884278 | MS.gene72217:CDS |
| GATACACCGTTGGTTAGGCT+AGG | 0.616430 | 7.2:+22884138 | MS.gene72217:CDS |
| ATAATCGTTGCCATATACCT+AGG | 0.620729 | 7.2:-22884177 | None:intergenic |
| GAATCAGCGTCGGAGTCTCG+TGG | 0.628287 | 7.2:+22883808 | MS.gene72217:CDS |
| AATCGGAGGAGGTGGCGAGG+AGG | 0.630478 | 7.2:-22883753 | None:intergenic |
| GTTTATGATATAGCTTGGGG+TGG | 0.631893 | 7.2:+22884015 | MS.gene72217:CDS |
| TTCCAACCTAGCCTAACCAA+CGG | 0.643891 | 7.2:-22884144 | None:intergenic |
| GGGATGAAGATGGATTTGGT+GGG | 0.648292 | 7.2:-22883706 | None:intergenic |
| CGATTCCGACGAATCAGCGT+CGG | 0.649196 | 7.2:+22883798 | MS.gene72217:CDS |
| TTTGGGATCTTTCTTCAATG+GGG | 0.652017 | 7.2:+22884355 | MS.gene72217:CDS |
| GTTCAGCTTGATGACACCAC+CGG | 0.655354 | 7.2:+22883637 | MS.gene72217:CDS |
| GGGTGGGTAAGGATGTTCGA+AGG | 0.657390 | 7.2:-22883686 | None:intergenic |
| CTAGTGTGAATGCCATAGCG+TGG | 0.659753 | 7.2:+22884277 | MS.gene72217:CDS |
| CAAATATGACACGAACTATG+CGG | 0.670679 | 7.2:-22884303 | None:intergenic |
| GAGGTTTATGATATAGCTTG+GGG | 0.671285 | 7.2:+22884012 | MS.gene72217:CDS |
| CTCGAAGTACCGATTCGACG+TGG | 0.693978 | 7.2:-22883916 | None:intergenic |
| TCTACACTTACGAAGCACCA+TGG | 0.695382 | 7.2:+22883518 | MS.gene72217:CDS |
| CCAAATACGGAGGAAATCGG+AGG | 0.698544 | 7.2:-22883767 | None:intergenic |
| CAAGCTGAACGATTTCGACG+CGG | 0.729457 | 7.2:-22883624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATAAAAACAGTGAATACTG+TGG | + | chr7.2:22883859-22883878 | MS.gene72217:CDS | 25.0% |
| ! | TCCAATCAAAAGAAGTAATT+GGG | - | chr7.2:22883885-22883904 | None:intergenic | 25.0% |
| ! | TTCAGAACTTTCGTAAATTA+TGG | - | chr7.2:22884115-22884134 | None:intergenic | 25.0% |
| ! | TTCCAATCAAAAGAAGTAAT+TGG | - | chr7.2:22883886-22883905 | None:intergenic | 25.0% |
| AAGAGGTTTATGATATAGCT+TGG | + | chr7.2:22884010-22884029 | MS.gene72217:CDS | 30.0% | |
| AGAGGTTTATGATATAGCTT+GGG | + | chr7.2:22884011-22884030 | MS.gene72217:CDS | 30.0% | |
| GTATATGGCAACGATTATAA+TGG | + | chr7.2:22884182-22884201 | MS.gene72217:CDS | 30.0% | |
| TAAACAAGATCCTAGGTATA+TGG | + | chr7.2:22884167-22884186 | MS.gene72217:CDS | 30.0% | |
| TTCTTTCTCAATATCCCAAA+TGG | - | chr7.2:22883959-22883978 | None:intergenic | 30.0% | |
| ! | ATTTGGGATCTTTCTTCAAT+GGG | + | chr7.2:22884354-22884373 | MS.gene72217:CDS | 30.0% |
| !! | GATTATAATGGATTCTGCTA+AGG | + | chr7.2:22884194-22884213 | MS.gene72217:CDS | 30.0% |
| ATAATCGTTGCCATATACCT+AGG | - | chr7.2:22884180-22884199 | None:intergenic | 35.0% | |
| CAAATATGACACGAACTATG+CGG | - | chr7.2:22884306-22884325 | None:intergenic | 35.0% | |
| GAACTCAAAAGTCTTCTCAA+TGG | + | chr7.2:22883835-22883854 | MS.gene72217:CDS | 35.0% | |
| GACTAAGCTTCAGATTCTTA+GGG | + | chr7.2:22884488-22884507 | MS.gene72217:CDS | 35.0% | |
| GAGGTTTATGATATAGCTTG+GGG | + | chr7.2:22884012-22884031 | MS.gene72217:CDS | 35.0% | |
| GTTAATTGCGCATGATAAAG+AGG | + | chr7.2:22883993-22884012 | MS.gene72217:CDS | 35.0% | |
| GTTGGAATAAACAAGATCCT+AGG | + | chr7.2:22884160-22884179 | MS.gene72217:CDS | 35.0% | |
| ! | GATTTGGGATCTTTCTTCAA+TGG | + | chr7.2:22884353-22884372 | MS.gene72217:CDS | 35.0% |
| ! | GCCCAATTACTTCTTTTGAT+TGG | + | chr7.2:22883881-22883900 | MS.gene72217:CDS | 35.0% |
| ! | TTTGGGATCTTTCTTCAATG+GGG | + | chr7.2:22884355-22884374 | MS.gene72217:CDS | 35.0% |
| AAAGCAATAGCAACCCAATC+AGG | - | chr7.2:22884465-22884484 | None:intergenic | 40.0% | |
| CCAGCAGTATAAGCCAAAAT+AGG | - | chr7.2:22884405-22884424 | None:intergenic | 40.0% | |
| CGACTAAGCTTCAGATTCTT+AGG | + | chr7.2:22884487-22884506 | MS.gene72217:CDS | 40.0% | |
| CGCAATTAACTGCGTATCAA+CGG | - | chr7.2:22883983-22884002 | None:intergenic | 40.0% | |
| CTGAGATTGAACAGCTTCAA+TGG | + | chr7.2:22884427-22884446 | MS.gene72217:CDS | 40.0% | |
| GATGTTCGAAGGAGAGATTT+GGG | - | chr7.2:22883678-22883697 | None:intergenic | 40.0% | |
| GTTTATGATATAGCTTGGGG+TGG | + | chr7.2:22884015-22884034 | MS.gene72217:CDS | 40.0% | |
| ! | TATTCGTTTTCCAACGCTAC+CGG | + | chr7.2:22884230-22884249 | MS.gene72217:CDS | 40.0% |
| !! | ATGATTCTCAGGCGTTGATT+TGG | + | chr7.2:22884337-22884356 | MS.gene72217:CDS | 40.0% |
| !! | TGATTCTCAGGCGTTGATTT+GGG | + | chr7.2:22884338-22884357 | MS.gene72217:CDS | 40.0% |
| !!! | CCTATTTTGGCTTATACTGC+TGG | + | chr7.2:22884402-22884421 | MS.gene72217:CDS | 40.0% |
| AATCGGAGATCCGCCAAATA+CGG | - | chr7.2:22883783-22883802 | None:intergenic | 45.0% | |
| CGACACAACGTGTACCATTT+GGG | + | chr7.2:22883942-22883961 | MS.gene72217:CDS | 45.0% | |
| CGACGAGCAACAAAAACGTT+CGG | + | chr7.2:22883492-22883511 | MS.gene72217:CDS | 45.0% | |
| GGATGTTCGAAGGAGAGATT+TGG | - | chr7.2:22883679-22883698 | None:intergenic | 45.0% | |
| GTCTTCTTCTCAGCCTGATT+GGG | + | chr7.2:22884449-22884468 | MS.gene72217:CDS | 45.0% | |
| GTCTTTGTCAGGGATGAAGA+TGG | - | chr7.2:22883719-22883738 | None:intergenic | 45.0% | |
| TAGTGTGAATGCCATAGCGT+GGG | + | chr7.2:22884278-22884297 | MS.gene72217:CDS | 45.0% | |
| TCGACACAACGTGTACCATT+TGG | + | chr7.2:22883941-22883960 | MS.gene72217:CDS | 45.0% | |
| TCGTGTCATATTTGCACTGC+TGG | + | chr7.2:22884312-22884331 | MS.gene72217:CDS | 45.0% | |
| TTCATAGCGTAGATGTGCCA+TGG | - | chr7.2:22883538-22883557 | None:intergenic | 45.0% | |
| TTCCAACCTAGCCTAACCAA+CGG | - | chr7.2:22884147-22884166 | None:intergenic | 45.0% | |
| TTCGAAGGAGAGATTTGGGT+CGG | - | chr7.2:22883674-22883693 | None:intergenic | 45.0% | |
| TTCTGAACCTGATACACCGT+TGG | + | chr7.2:22884128-22884147 | MS.gene72217:CDS | 45.0% | |
| ! | AACCTGATACACCGTTGGTT+AGG | + | chr7.2:22884133-22884152 | MS.gene72217:CDS | 45.0% |
| ! | AGGGATGAAGATGGATTTGG+TGG | - | chr7.2:22883710-22883729 | None:intergenic | 45.0% |
| ! | CGAACGTTTTTGTTGCTCGT+CGG | - | chr7.2:22883494-22883513 | None:intergenic | 45.0% |
| ! | GGGATGAAGATGGATTTGGT+GGG | - | chr7.2:22883709-22883728 | None:intergenic | 45.0% |
| ! | GTCAGGGATGAAGATGGATT+TGG | - | chr7.2:22883713-22883732 | None:intergenic | 45.0% |
| ! | TCTACACTTACGAAGCACCA+TGG | + | chr7.2:22883518-22883537 | MS.gene72217:CDS | 45.0% |
| ! | TTCTGCTGATGGGTCTGTTA+GGG | + | chr7.2:22884059-22884078 | MS.gene72217:CDS | 45.0% |
| ! | TTTCTGCTGATGGGTCTGTT+AGG | + | chr7.2:22884058-22884077 | MS.gene72217:CDS | 45.0% |
| !! | AGGTGGGCTTGATCCTATTT+TGG | + | chr7.2:22884389-22884408 | MS.gene72217:CDS | 45.0% |
| !! | ATGAAGATGGATTTGGTGGG+TGG | - | chr7.2:22883706-22883725 | None:intergenic | 45.0% |
| !! | TGAAGATGGATTTGGTGGGT+GGG | - | chr7.2:22883705-22883724 | None:intergenic | 45.0% |
| !!! | GGCGATATTTTTTGTCGCGA+CGG | - | chr7.2:22883570-22883589 | None:intergenic | 45.0% |
| !!! | TGGTGTTGGTGTTTTTGCGT+CGG | + | chr7.2:22884035-22884054 | MS.gene72217:CDS | 45.0% |
| AATACGGAGGAAATCGGAGG+AGG | - | chr7.2:22883767-22883786 | None:intergenic | 50.0% | |
| AGCCTAACCAACGGTGTATC+AGG | - | chr7.2:22884138-22884157 | None:intergenic | 50.0% | |
| CAAGCTGAACGATTTCGACG+CGG | - | chr7.2:22883627-22883646 | None:intergenic | 50.0% | |
| CCAAATACGGAGGAAATCGG+AGG | - | chr7.2:22883770-22883789 | None:intergenic | 50.0% | |
| CCGATTTCCTCCGTATTTGG+CGG | + | chr7.2:22883770-22883789 | MS.gene72217:CDS | 50.0% | |
| CCGCCAAATACGGAGGAAAT+CGG | - | chr7.2:22883773-22883792 | None:intergenic | 50.0% | |
| CCTCCGATTTCCTCCGTATT+TGG | + | chr7.2:22883767-22883786 | MS.gene72217:CDS | 50.0% | |
| CTAAGAGAGAAGCGATAGCG+AGG | - | chr7.2:22883591-22883610 | None:intergenic | 50.0% | |
| CTAGTGTGAATGCCATAGCG+TGG | + | chr7.2:22884277-22884296 | MS.gene72217:CDS | 50.0% | |
| GAACGATTTCGACGCGGTTA+GGG | - | chr7.2:22883621-22883640 | None:intergenic | 50.0% | |
| GAAGCTGAACCACGTCGAAT+CGG | + | chr7.2:22883907-22883926 | MS.gene72217:CDS | 50.0% | |
| GATATAGCTTGGGGTGGTGT+TGG | + | chr7.2:22884021-22884040 | MS.gene72217:CDS | 50.0% | |
| GGCACATCTACGCTATGAAC+TGG | + | chr7.2:22883539-22883558 | MS.gene72217:CDS | 50.0% | |
| GGTCTTCTTCTCAGCCTGAT+TGG | + | chr7.2:22884448-22884467 | MS.gene72217:CDS | 50.0% | |
| TGAACGATTTCGACGCGGTT+AGG | - | chr7.2:22883622-22883641 | None:intergenic | 50.0% | |
| ! | CACTGCTGGTGATGATTCTC+AGG | + | chr7.2:22884326-22884345 | MS.gene72217:CDS | 50.0% |
| ! | GATACACCGTTGGTTAGGCT+AGG | + | chr7.2:22884138-22884157 | MS.gene72217:CDS | 50.0% |
| ! | GTTCAGCTTGATGACACCAC+CGG | + | chr7.2:22883637-22883656 | MS.gene72217:CDS | 50.0% |
| ! | TGGGTCGGATTTGATTTCGC+CGG | - | chr7.2:22883659-22883678 | None:intergenic | 50.0% |
| !! | ATGGATTTGGTGGGTGGGTA+AGG | - | chr7.2:22883700-22883719 | None:intergenic | 50.0% |
| !! | TTGCGTCGGTTTCTGCTGAT+GGG | + | chr7.2:22884049-22884068 | MS.gene72217:CDS | 50.0% |
| !! | TTGCTCGTCGGAAGTGTCTT+GGG | - | chr7.2:22883482-22883501 | None:intergenic | 50.0% |
| !! | TTTGCGTCGGTTTCTGCTGA+TGG | + | chr7.2:22884048-22884067 | MS.gene72217:CDS | 50.0% |
| CGATTCCGACGAATCAGCGT+CGG | + | chr7.2:22883798-22883817 | MS.gene72217:CDS | 55.0% | |
| GGATCAAGCCCACCTTCAAC+AGG | - | chr7.2:22884384-22884403 | None:intergenic | 55.0% | |
| GGGTGGGTAAGGATGTTCGA+AGG | - | chr7.2:22883689-22883708 | None:intergenic | 55.0% | |
| TCAATGGGGCAGCCTGTTGA+AGG | + | chr7.2:22884369-22884388 | MS.gene72217:CDS | 55.0% | |
| TGTCTCTGCAACTCCACCAC+CGG | - | chr7.2:22884252-22884271 | None:intergenic | 55.0% | |
| ! | CACCGTTGGTTAGGCTAGGT+TGG | + | chr7.2:22884142-22884161 | MS.gene72217:CDS | 55.0% |
| ! | GTCGGATTTGATTTCGCCGG+TGG | - | chr7.2:22883656-22883675 | None:intergenic | 55.0% |
| ! | TCGTTTTCCAACGCTACCGG+TGG | + | chr7.2:22884233-22884252 | MS.gene72217:CDS | 55.0% |
| ! | TTTTCCAACGCTACCGGTGG+TGG | + | chr7.2:22884236-22884255 | MS.gene72217:CDS | 55.0% |
| !! | AGACTCCGACGCTGATTCGT+CGG | - | chr7.2:22883806-22883825 | None:intergenic | 55.0% |
| !! | CGACGCTGATTCGTCGGAAT+CGG | - | chr7.2:22883800-22883819 | None:intergenic | 55.0% |
| !! | CGTCGGAAGTGTCTTGGGTT+GGG | - | chr7.2:22883477-22883496 | None:intergenic | 55.0% |
| !! | CTCGAAGTACCGATTCGACG+TGG | - | chr7.2:22883919-22883938 | None:intergenic | 55.0% |
| !! | GGCGTTGGCAGTCTTTGTCA+GGG | - | chr7.2:22883729-22883748 | None:intergenic | 55.0% |
| !! | GTTGCTCGTCGGAAGTGTCT+TGG | - | chr7.2:22883483-22883502 | None:intergenic | 55.0% |
| !! | TCGTCGGAAGTGTCTTGGGT+TGG | - | chr7.2:22883478-22883497 | None:intergenic | 55.0% |
| AACTCCACCACCGGTAGCGT+TGG | - | chr7.2:22884243-22884262 | None:intergenic | 60.0% | |
| ACGGAGGAAATCGGAGGAGG+TGG | - | chr7.2:22883764-22883783 | None:intergenic | 60.0% | |
| ATGGGGCAGCCTGTTGAAGG+TGG | + | chr7.2:22884372-22884391 | MS.gene72217:CDS | 60.0% | |
| CGGAGATCCGCCAAATACGG+AGG | - | chr7.2:22883780-22883799 | None:intergenic | 60.0% | |
| TGGGGCAGCCTGTTGAAGGT+GGG | + | chr7.2:22884373-22884392 | MS.gene72217:CDS | 60.0% | |
| ! | GAATCAGCGTCGGAGTCTCG+TGG | + | chr7.2:22883808-22883827 | MS.gene72217:CDS | 60.0% |
| !! | GGGCGTTGGCAGTCTTTGTC+AGG | - | chr7.2:22883730-22883749 | None:intergenic | 60.0% |
| AATCGGAGGAGGTGGCGAGG+AGG | - | chr7.2:22883756-22883775 | None:intergenic | 65.0% | |
| ACTATGCGGCGCCCACGCTA+TGG | - | chr7.2:22884292-22884311 | None:intergenic | 65.0% | |
| GGAAATCGGAGGAGGTGGCG+AGG | - | chr7.2:22883759-22883778 | None:intergenic | 65.0% | |
| AGGAGGTGGCGAGGAGGTCG+GGG | - | chr7.2:22883750-22883769 | None:intergenic | 70.0% | |
| GAGGAGGTGGCGAGGAGGTC+GGG | - | chr7.2:22883751-22883770 | None:intergenic | 70.0% | |
| GGAGGAGGTGGCGAGGAGGT+CGG | - | chr7.2:22883752-22883771 | None:intergenic | 70.0% | |
| TGGCGAGGAGGTCGGGGCGT+TGG | - | chr7.2:22883744-22883763 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 22883457 | 22884515 | 22883457 | ID=MS.gene72217 |
| chr7.2 | mRNA | 22883457 | 22884515 | 22883457 | ID=MS.gene72217.t1;Parent=MS.gene72217 |
| chr7.2 | exon | 22883457 | 22884515 | 22883457 | ID=MS.gene72217.t1.exon1;Parent=MS.gene72217.t1 |
| chr7.2 | CDS | 22883457 | 22884515 | 22883457 | ID=cds.MS.gene72217.t1;Parent=MS.gene72217.t1 |
| Gene Sequence |
| Protein sequence |
