Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72343.t1 | XP_003608666.1 | 97.8 | 357 | 8 | 0 | 1 | 357 | 1 | 357 | 2.20E-203 | 718 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72343.t1 | Q8L7W2 | 59.4 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 6.3e-119 | 428.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72343.t1 | G7JHP2 | 97.8 | 357 | 8 | 0 | 1 | 357 | 1 | 357 | 1.6e-203 | 718.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051208 | MS.gene72343 | 0.815156 | 1.07E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene72343 | -0.809581 | 1.76E-50 | -1.69E-46 |
| MS.gene052077 | MS.gene72343 | 0.816171 | 6.34E-52 | -1.69E-46 |
| MS.gene052389 | MS.gene72343 | 0.800035 | 1.74E-48 | -1.69E-46 |
| MS.gene052590 | MS.gene72343 | 0.807929 | 3.98E-50 | -1.69E-46 |
| MS.gene053330 | MS.gene72343 | 0.816479 | 5.42E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene72343 | 0.818878 | 1.56E-52 | -1.69E-46 |
| MS.gene058710 | MS.gene72343 | 0.817814 | 2.71E-52 | -1.69E-46 |
| MS.gene058746 | MS.gene72343 | 0.809481 | 1.85E-50 | -1.69E-46 |
| MS.gene059511 | MS.gene72343 | 0.800043 | 1.73E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72343.t1 | MTR_4g100480 | 97.759 | 357 | 8 | 0 | 1 | 357 | 1 | 357 | 0.0 | 728 |
| MS.gene72343.t1 | MTR_2g026715 | 44.951 | 307 | 164 | 3 | 51 | 353 | 14 | 319 | 3.11e-92 | 279 |
| MS.gene72343.t1 | MTR_3g460790 | 50.775 | 258 | 126 | 1 | 91 | 348 | 25 | 281 | 3.65e-89 | 270 |
| MS.gene72343.t1 | MTR_3g082770 | 44.218 | 294 | 140 | 4 | 37 | 328 | 45 | 316 | 2.62e-86 | 265 |
| MS.gene72343.t1 | MTR_4g133945 | 48.235 | 255 | 131 | 1 | 91 | 344 | 12 | 266 | 2.07e-85 | 260 |
| MS.gene72343.t1 | MTR_8g091995 | 50.198 | 253 | 124 | 2 | 96 | 348 | 23 | 273 | 9.20e-84 | 256 |
| MS.gene72343.t1 | MTR_3g460790 | 56.281 | 199 | 86 | 1 | 91 | 289 | 25 | 222 | 1.12e-75 | 234 |
| MS.gene72343.t1 | MTR_2g026715 | 50.000 | 178 | 88 | 1 | 76 | 253 | 56 | 232 | 7.08e-61 | 195 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72343.t1 | AT5G47240 | 59.392 | 362 | 131 | 5 | 9 | 354 | 2 | 363 | 5.99e-153 | 435 |
| MS.gene72343.t1 | AT5G47240 | 54.987 | 391 | 131 | 6 | 9 | 354 | 2 | 392 | 4.87e-146 | 419 |
| MS.gene72343.t1 | AT4G25434 | 48.627 | 255 | 130 | 1 | 91 | 345 | 19 | 272 | 9.92e-86 | 261 |
| MS.gene72343.t1 | AT5G47650 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.70e-85 | 259 |
| MS.gene72343.t1 | AT5G47650 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.70e-85 | 259 |
| MS.gene72343.t1 | AT5G47650 | 49.225 | 258 | 128 | 2 | 91 | 348 | 19 | 273 | 2.70e-85 | 259 |
| MS.gene72343.t1 | AT5G47650 | 49.225 | 258 | 128 | 2 | 91 | 348 | 66 | 320 | 1.34e-84 | 259 |
| MS.gene72343.t1 | AT5G47650 | 49.225 | 258 | 128 | 2 | 91 | 348 | 65 | 319 | 1.38e-84 | 259 |
| MS.gene72343.t1 | AT4G25434 | 47.059 | 255 | 129 | 2 | 91 | 345 | 19 | 267 | 2.05e-80 | 247 |
| MS.gene72343.t1 | AT4G25434 | 43.972 | 282 | 130 | 2 | 91 | 345 | 19 | 299 | 5.93e-80 | 247 |
| MS.gene72343.t1 | AT2G04430 | 48.750 | 240 | 119 | 3 | 91 | 326 | 10 | 249 | 1.07e-74 | 233 |
| MS.gene72343.t1 | AT4G25434 | 42.553 | 282 | 129 | 3 | 91 | 345 | 19 | 294 | 1.10e-74 | 233 |
| MS.gene72343.t1 | AT2G04430 | 48.750 | 240 | 119 | 3 | 91 | 326 | 29 | 268 | 2.71e-74 | 232 |
| MS.gene72343.t1 | AT4G25434 | 53.266 | 199 | 92 | 1 | 91 | 289 | 19 | 216 | 2.59e-73 | 227 |
| MS.gene72343.t1 | AT4G12720 | 46.304 | 257 | 134 | 4 | 91 | 345 | 10 | 264 | 3.67e-72 | 226 |
| MS.gene72343.t1 | AT4G12720 | 46.304 | 257 | 134 | 4 | 91 | 345 | 10 | 264 | 3.67e-72 | 226 |
| MS.gene72343.t1 | AT4G12720 | 46.304 | 257 | 134 | 4 | 91 | 345 | 10 | 264 | 3.67e-72 | 226 |
| MS.gene72343.t1 | AT4G25434 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.78e-68 | 214 |
| MS.gene72343.t1 | AT4G25434 | 50.761 | 197 | 97 | 0 | 149 | 345 | 31 | 227 | 3.78e-68 | 214 |
| MS.gene72343.t1 | AT4G25434 | 51.256 | 199 | 91 | 2 | 91 | 289 | 19 | 211 | 6.10e-68 | 213 |
| MS.gene72343.t1 | AT4G25434 | 46.903 | 226 | 92 | 2 | 91 | 289 | 19 | 243 | 9.50e-68 | 213 |
| MS.gene72343.t1 | AT2G04450 | 44.656 | 262 | 140 | 5 | 88 | 346 | 7 | 266 | 1.17e-66 | 212 |
| MS.gene72343.t1 | AT4G12720 | 40.067 | 297 | 134 | 5 | 91 | 345 | 10 | 304 | 4.57e-64 | 206 |
| MS.gene72343.t1 | AT4G25434 | 48.731 | 197 | 96 | 1 | 149 | 345 | 31 | 222 | 8.72e-63 | 200 |
| MS.gene72343.t1 | AT4G12720 | 50.746 | 201 | 96 | 3 | 91 | 289 | 10 | 209 | 2.03e-61 | 196 |
| MS.gene72343.t1 | AT4G25434 | 53.704 | 162 | 74 | 1 | 91 | 252 | 19 | 179 | 1.00e-58 | 190 |
| MS.gene72343.t1 | AT4G25434 | 43.478 | 207 | 90 | 1 | 166 | 345 | 1 | 207 | 2.55e-53 | 175 |
| MS.gene72343.t1 | AT4G25434 | 46.032 | 189 | 74 | 2 | 91 | 252 | 19 | 206 | 3.61e-53 | 176 |
| MS.gene72343.t1 | AT4G12720 | 46.154 | 182 | 95 | 3 | 166 | 345 | 1 | 181 | 3.19e-46 | 156 |
| MS.gene72343.t1 | AT2G04440 | 47.826 | 138 | 71 | 1 | 91 | 227 | 10 | 147 | 1.25e-37 | 134 |
Find 66 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAAGTTCCCATTGTATTAA+TGG | 0.183525 | 8.3:-21026536 | MS.gene72343:CDS |
| TGCCTCAGATGACACTTATT+TGG | 0.255967 | 8.3:-21026600 | MS.gene72343:CDS |
| TGCAGGGAAAGAAGGGAATT+TGG | 0.271776 | 8.3:-21026282 | MS.gene72343:intron |
| GGATTGTGTGGTAACCTATT+TGG | 0.272788 | 8.3:+21026437 | None:intergenic |
| GATATGTGATGTTAACTTAC+TGG | 0.280931 | 8.3:-21025651 | MS.gene72343:CDS |
| CTCCTGCAACTCTTGGCCTT+TGG | 0.301775 | 8.3:-21025385 | MS.gene72343:CDS |
| TTCCAAAGGCCAAGAGTTGC+AGG | 0.325763 | 8.3:+21025383 | None:intergenic |
| TAAATTACCTTGACAGCAAC+TGG | 0.331130 | 8.3:+21026226 | None:intergenic |
| AGAGAAGTGAAGGAAGAAAC+TGG | 0.340232 | 8.3:-21024972 | MS.gene72343:CDS |
| ATGGAATCTTCTTGTATTAG+TGG | 0.340759 | 8.3:+21024497 | None:intergenic |
| TTGTTGAAGTCATAGCATTC+AGG | 0.346192 | 8.3:-21024792 | MS.gene72343:intron |
| TTGAAATTGAAGGAGCAAAA+TGG | 0.347302 | 8.3:-21024547 | MS.gene72343:CDS |
| TTCAAATGTGGACAAAGAAT+TGG | 0.348986 | 8.3:+21027007 | None:intergenic |
| GTCAAAGACATTATAGTATA+GGG | 0.352247 | 8.3:+21024373 | None:intergenic |
| CAAGTAGTTTCCAAGTTTGA+TGG | 0.355833 | 8.3:-21024407 | MS.gene72343:CDS |
| GGAAGCATGCAAGGTCCTTC+AGG | 0.363281 | 8.3:+21025625 | None:intergenic |
| TGTCAAAGACATTATAGTAT+AGG | 0.374450 | 8.3:+21024372 | None:intergenic |
| ACAAGATCAGATTGCTCTAT+AGG | 0.380012 | 8.3:+21026250 | None:intergenic |
| GGATTCTCATTGATCCAAAT+AGG | 0.382227 | 8.3:-21026451 | MS.gene72343:CDS |
| CATTGTTCTCCTGCAACTCT+TGG | 0.398283 | 8.3:-21025392 | MS.gene72343:CDS |
| AGCATAGATGCAAAGGCATA+TGG | 0.400461 | 8.3:+21026416 | None:intergenic |
| ACTTGATGTGATGCATTTGC+TGG | 0.407708 | 8.3:+21025604 | None:intergenic |
| GATATCTTTATTGCTCGTCT+TGG | 0.413439 | 8.3:-21024458 | MS.gene72343:CDS |
| GATGCCTTTGATGATGAGTA+TGG | 0.416511 | 8.3:-21026476 | MS.gene72343:CDS |
| ATATCTTTATTGCTCGTCTT+GGG | 0.440305 | 8.3:-21024457 | MS.gene72343:CDS |
| GGCCTTTGGAAAATACCAAC+TGG | 0.454871 | 8.3:-21025371 | MS.gene72343:CDS |
| CAATACCACCATGCAGAGCC+AGG | 0.462871 | 8.3:-21025673 | MS.gene72343:CDS |
| AGTTGATCCATTAATACAAT+GGG | 0.469605 | 8.3:+21026529 | None:intergenic |
| TCTTTGTCCACATTTGAAGT+TGG | 0.473737 | 8.3:-21027002 | MS.gene72343:CDS |
| CAGGCAGAGGAGATTTATAC+AGG | 0.482585 | 8.3:-21025002 | MS.gene72343:CDS |
| TAAGTTAACATCACATATCC+TGG | 0.491360 | 8.3:+21025655 | None:intergenic |
| GCATCACATCAAGTCGGAAT+CGG | 0.491928 | 8.3:-21025595 | MS.gene72343:CDS |
| TTTGTTTATCTCTTTCTCAC+TGG | 0.499015 | 8.3:-21026394 | MS.gene72343:CDS |
| GTGGATGATCTTGAAATTGA+AGG | 0.507225 | 8.3:-21024557 | MS.gene72343:CDS |
| TCTTGTTCCAGTTGCTGTCA+AGG | 0.509061 | 8.3:-21026233 | MS.gene72343:intron |
| GAGAAGTGAAGGAAGAAACT+GGG | 0.516226 | 8.3:-21024971 | MS.gene72343:CDS |
| AGGAGCTGTAAGAGAAGTGA+AGG | 0.519985 | 8.3:-21024982 | MS.gene72343:CDS |
| AAGTTGATCCATTAATACAA+TGG | 0.544572 | 8.3:+21026528 | None:intergenic |
| TAAACAAAGCATAGATGCAA+AGG | 0.547763 | 8.3:+21026409 | None:intergenic |
| ATCTACAATCTTCTTGAACA+TGG | 0.556041 | 8.3:+21024478 | None:intergenic |
| TCTTTCTCACTGGAAAAGAA+TGG | 0.560278 | 8.3:-21026384 | MS.gene72343:intron |
| CGTCTTGGGAAACGTTATTG+TGG | 0.560922 | 8.3:-21024443 | MS.gene72343:CDS |
| AATGATGATTCCAACTGTGT+TGG | 0.569974 | 8.3:-21024350 | MS.gene72343:CDS |
| CCCTCCATACTCATCATCAA+AGG | 0.576216 | 8.3:+21026472 | None:intergenic |
| ACCTCATGAATGAATCCAGT+TGG | 0.579034 | 8.3:+21025356 | None:intergenic |
| CAAATTTGTAAAGGTGCTTG+TGG | 0.584011 | 8.3:-21025426 | MS.gene72343:intron |
| GCATTTGCTGGAAGCATGCA+AGG | 0.587186 | 8.3:+21025616 | None:intergenic |
| TCACATATCCTGGCTCTGCA+TGG | 0.590682 | 8.3:+21025665 | None:intergenic |
| TTAACTTACTGGATTCCTGA+AGG | 0.599287 | 8.3:-21025640 | MS.gene72343:CDS |
| AGAAGTGAAGGAAGAAACTG+GGG | 0.603388 | 8.3:-21024970 | MS.gene72343:intron |
| CCTCTGCGGCACTTGAACTG+AGG | 0.612710 | 8.3:+21026921 | None:intergenic |
| TCACATCAAGTCGGAATCGG+AGG | 0.616036 | 8.3:-21025592 | MS.gene72343:CDS |
| CCTTTGATGATGAGTATGGA+GGG | 0.620814 | 8.3:-21026472 | MS.gene72343:CDS |
| ACAGTGATCGTAGATGATAG+TGG | 0.623914 | 8.3:+21024578 | None:intergenic |
| CCTCAGTTCAAGTGCCGCAG+AGG | 0.632039 | 8.3:-21026921 | MS.gene72343:intron |
| TGCTCTACAAACTCAACCAG+TGG | 0.632663 | 8.3:+21024521 | None:intergenic |
| CCTAAAACTTGTGAACGAAG+TGG | 0.652230 | 8.3:+21026968 | None:intergenic |
| AGGAGCAAAATGGATGCCAC+TGG | 0.654186 | 8.3:-21024537 | MS.gene72343:CDS |
| CATATCCTGGCTCTGCATGG+TGG | 0.655970 | 8.3:+21025668 | None:intergenic |
| TTCTAGGCATGTACACAATG+TGG | 0.663546 | 8.3:-21024642 | MS.gene72343:intron |
| GCAAATGCATCACATCAAGT+CGG | 0.666360 | 8.3:-21025601 | MS.gene72343:CDS |
| GCCTTTGATGATGAGTATGG+AGG | 0.668533 | 8.3:-21026473 | MS.gene72343:CDS |
| ACCAACTGGATTCATTCATG+AGG | 0.669787 | 8.3:-21025357 | MS.gene72343:intron |
| TGCCAAATAAGTGTCATCTG+AGG | 0.672505 | 8.3:+21026598 | None:intergenic |
| GCAAAGGCATATGGATTGTG+TGG | 0.674954 | 8.3:+21026425 | None:intergenic |
| ACTATCATCTACGATCACTG+TGG | 0.741537 | 8.3:-21024576 | MS.gene72343:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGAACTTATTCAT+AGG | - | chr8.3:21026475-21026494 | MS.gene72343:CDS | 15.0% |
| !! | AAAAATTGAACTTATTCATA+GGG | - | chr8.3:21026476-21026495 | MS.gene72343:CDS | 15.0% |
| !! | AATTTATTCTTCTATTTGTT+GGG | - | chr8.3:21025420-21025439 | MS.gene72343:intron | 15.0% |
| !! | ACATAATAACATTACATAAA+TGG | + | chr8.3:21026316-21026335 | None:intergenic | 15.0% |
| !! | CAATTTATGTTTAAATACTA+CGG | - | chr8.3:21026219-21026238 | MS.gene72343:intron | 15.0% |
| !!! | CTTTATTTTATTCAATCTTA+TGG | - | chr8.3:21026185-21026204 | MS.gene72343:intron | 15.0% |
| !! | AGAACTTTATGATAAATTCT+AGG | - | chr8.3:21026714-21026733 | MS.gene72343:intron | 20.0% |
| !! | AGCTAATATTTGAACTTAAT+TGG | - | chr8.3:21024657-21024676 | MS.gene72343:intron | 20.0% |
| !! | CAATTTATTCTTCTATTTGT+TGG | - | chr8.3:21025419-21025438 | MS.gene72343:intron | 20.0% |
| !! | TTCTTCTAACAAATTTGTAA+AGG | - | chr8.3:21025937-21025956 | MS.gene72343:intron | 20.0% |
| !! | TTGGTTATATTAATTGTCTT+AGG | - | chr8.3:21025318-21025337 | MS.gene72343:intron | 20.0% |
| !! | TTGTATTAATGTATATTCAC+AGG | + | chr8.3:21026676-21026695 | None:intergenic | 20.0% |
| !!! | AGTTTATCATCTTTAATTTC+AGG | - | chr8.3:21024728-21024747 | MS.gene72343:intron | 20.0% |
| !!! | GTTTATCATCTTTAATTTCA+GGG | - | chr8.3:21024729-21024748 | MS.gene72343:intron | 20.0% |
| !!! | TAACTTGTAATTACGTTAAA+CGG | + | chr8.3:21025280-21025299 | None:intergenic | 20.0% |
| !!! | TTTTATTTGCATCAAAACTT+AGG | + | chr8.3:21026454-21026473 | None:intergenic | 20.0% |
| ! | ACAAACATTGTTGAAAACTA+TGG | + | chr8.3:21025451-21025470 | None:intergenic | 25.0% |
| ! | ACAATGTTTGTAAAGCAAAA+AGG | - | chr8.3:21025460-21025479 | MS.gene72343:intron | 25.0% |
| ! | ACTAAAATGTTAAGAGAATG+TGG | - | chr8.3:21024691-21024710 | MS.gene72343:intron | 25.0% |
| ! | AGCTTATATGAGAATCTAAT+TGG | + | chr8.3:21024488-21024507 | None:intergenic | 25.0% |
| ! | AGTTGATCCATTAATACAAT+GGG | + | chr8.3:21024846-21024865 | None:intergenic | 25.0% |
| ! | ATTGAAAACCTAACATTATG+AGG | - | chr8.3:21025064-21025083 | MS.gene72343:intron | 25.0% |
| ! | CAAATATCATTGTGTGATTT+AGG | + | chr8.3:21025238-21025257 | None:intergenic | 25.0% |
| ! | GTCAAAGACATTATAGTATA+GGG | + | chr8.3:21027002-21027021 | None:intergenic | 25.0% |
| ! | TGTCAAAGACATTATAGTAT+AGG | + | chr8.3:21027003-21027022 | None:intergenic | 25.0% |
| !! | AAATTTTCCAACTTCAAATG+TGG | + | chr8.3:21024380-21024399 | None:intergenic | 25.0% |
| !! | AAGTTGATCCATTAATACAA+TGG | + | chr8.3:21024847-21024866 | None:intergenic | 25.0% |
| !! | ATCTAAAGTCATGGTTAATT+TGG | - | chr8.3:21024536-21024555 | MS.gene72343:CDS | 25.0% |
| !! | TTGCATAAAATCTAAAGTCA+TGG | - | chr8.3:21024527-21024546 | MS.gene72343:CDS | 25.0% |
| !!! | TTATTTTTGTCTTAACTCTC+CGG | - | chr8.3:21024562-21024581 | MS.gene72343:CDS | 25.0% |
| AATGTATAAAGTGTATCCTG+CGG | - | chr8.3:21025344-21025363 | MS.gene72343:intron | 30.0% | |
| ACAAGTTCCCATTGTATTAA+TGG | - | chr8.3:21024836-21024855 | MS.gene72343:intron | 30.0% | |
| ATATCTTTATTGCTCGTCTT+GGG | - | chr8.3:21026915-21026934 | MS.gene72343:intron | 30.0% | |
| ATCTACAATCTTCTTGAACA+TGG | + | chr8.3:21026897-21026916 | None:intergenic | 30.0% | |
| ATGGAATCTTCTTGTATTAG+TGG | + | chr8.3:21026878-21026897 | None:intergenic | 30.0% | |
| CACTAGGATAATTATACACA+TGG | + | chr8.3:21025027-21025046 | None:intergenic | 30.0% | |
| GATATGTGATGTTAACTTAC+TGG | - | chr8.3:21025721-21025740 | MS.gene72343:intron | 30.0% | |
| TAAACAAAGCATAGATGCAA+AGG | + | chr8.3:21024966-21024985 | None:intergenic | 30.0% | |
| TAAGTTAACATCACATATCC+TGG | + | chr8.3:21025720-21025739 | None:intergenic | 30.0% | |
| TCAATCAAAACAACGAAGTA+TGG | - | chr8.3:21025811-21025830 | MS.gene72343:intron | 30.0% | |
| TTCAAATGTGGACAAAGAAT+TGG | + | chr8.3:21024368-21024387 | None:intergenic | 30.0% | |
| TTGAAATTGAAGGAGCAAAA+TGG | - | chr8.3:21026825-21026844 | MS.gene72343:intron | 30.0% | |
| TTTACTAGTTGAAGAGTTGT+TGG | - | chr8.3:21025633-21025652 | MS.gene72343:CDS | 30.0% | |
| TTTGTTTATCTCTTTCTCAC+TGG | - | chr8.3:21024978-21024997 | MS.gene72343:CDS | 30.0% | |
| ! | AGTAATTTTGCCATCAAACT+TGG | + | chr8.3:21026978-21026997 | None:intergenic | 30.0% |
| ! | AGTTATGATTAGTTGCATGT+TGG | - | chr8.3:21025299-21025318 | MS.gene72343:intron | 30.0% |
| ! | ATCTCTAGTTTAGCTTATGT+TGG | + | chr8.3:21026276-21026295 | None:intergenic | 30.0% |
| ! | GAATTTCTTGATGACATGAT+TGG | + | chr8.3:21026611-21026630 | None:intergenic | 30.0% |
| ! | TAACATTATGAGGTTTTGCA+GGG | - | chr8.3:21025074-21025093 | MS.gene72343:intron | 30.0% |
| ! | TCTCTAGTTTAGCTTATGTT+GGG | + | chr8.3:21026275-21026294 | None:intergenic | 30.0% |
| !!! | ACAAGTTTTAGGCACAAATT+TGG | - | chr8.3:21024415-21024434 | MS.gene72343:CDS | 30.0% |
| AATGATGATTCCAACTGTGT+TGG | - | chr8.3:21027022-21027041 | MS.gene72343:CDS | 35.0% | |
| ACAAGATCAGATTGCTCTAT+AGG | + | chr8.3:21025125-21025144 | None:intergenic | 35.0% | |
| ATTACACTTTACTTACCTCG+AGG | + | chr8.3:21024624-21024643 | None:intergenic | 35.0% | |
| CAAGTAGTTTCCAAGTTTGA+TGG | - | chr8.3:21026965-21026984 | MS.gene72343:CDS | 35.0% | |
| CTGCAAAACCTCATAATGTT+AGG | + | chr8.3:21025075-21025094 | None:intergenic | 35.0% | |
| CTTATGTTGGGTACAGTTTA+GGG | + | chr8.3:21026263-21026282 | None:intergenic | 35.0% | |
| GATATCTTTATTGCTCGTCT+TGG | - | chr8.3:21026914-21026933 | MS.gene72343:intron | 35.0% | |
| GGATTCTCATTGATCCAAAT+AGG | - | chr8.3:21024921-21024940 | MS.gene72343:intron | 35.0% | |
| GTATGCTCGTTAAACGAAAT+AGG | - | chr8.3:21026041-21026060 | MS.gene72343:intron | 35.0% | |
| GTGGATGATCTTGAAATTGA+AGG | - | chr8.3:21026815-21026834 | MS.gene72343:intron | 35.0% | |
| TAAATTACCTTGACAGCAAC+TGG | + | chr8.3:21025149-21025168 | None:intergenic | 35.0% | |
| TATTCATAGGGTTGCATGAT+AGG | - | chr8.3:21026488-21026507 | MS.gene72343:CDS | 35.0% | |
| TCTTTCTCACTGGAAAAGAA+TGG | - | chr8.3:21024988-21025007 | MS.gene72343:CDS | 35.0% | |
| TTAACTTACTGGATTCCTGA+AGG | - | chr8.3:21025732-21025751 | MS.gene72343:intron | 35.0% | |
| TTATGTTGGGTACAGTTTAG+GGG | + | chr8.3:21026262-21026281 | None:intergenic | 35.0% | |
| TTGTTGAAGTCATAGCATTC+AGG | - | chr8.3:21026580-21026599 | MS.gene72343:CDS | 35.0% | |
| ! | CTAACATTATGAGGTTTTGC+AGG | - | chr8.3:21025073-21025092 | MS.gene72343:intron | 35.0% |
| ! | TCTTTGTCCACATTTGAAGT+TGG | - | chr8.3:21024370-21024389 | MS.gene72343:CDS | 35.0% |
| ! | TGAGGTAACTAGACTCATTT+TGG | - | chr8.3:21025661-21025680 | MS.gene72343:CDS | 35.0% |
| !! | ATCCAGTTGGTATTTTCCAA+AGG | + | chr8.3:21026006-21026025 | None:intergenic | 35.0% |
| !! | CAAATTTGTAAAGGTGCTTG+TGG | - | chr8.3:21025946-21025965 | MS.gene72343:intron | 35.0% |
| !!! | ATTGAACTTTTTTGCCAACG+CGG | + | chr8.3:21025489-21025508 | None:intergenic | 35.0% |
| AAAACTTGATACATGACCGC+AGG | + | chr8.3:21025363-21025382 | None:intergenic | 40.0% | |
| ACAGTGATCGTAGATGATAG+TGG | + | chr8.3:21026797-21026816 | None:intergenic | 40.0% | |
| ACCAACTGGATTCATTCATG+AGG | - | chr8.3:21026015-21026034 | MS.gene72343:intron | 40.0% | |
| ACCTCATGAATGAATCCAGT+TGG | + | chr8.3:21026019-21026038 | None:intergenic | 40.0% | |
| ACTATCATCTACGATCACTG+TGG | - | chr8.3:21026796-21026815 | MS.gene72343:intron | 40.0% | |
| ACTTGATGTGATGCATTTGC+TGG | + | chr8.3:21025771-21025790 | None:intergenic | 40.0% | |
| AGAAGTGAAGGAAGAAACTG+GGG | - | chr8.3:21026402-21026421 | MS.gene72343:CDS | 40.0% | |
| AGAGAAGTGAAGGAAGAAAC+TGG | - | chr8.3:21026400-21026419 | MS.gene72343:CDS | 40.0% | |
| ATCTGTTTCCCTTTGAACCA+GGG | + | chr8.3:21026085-21026104 | None:intergenic | 40.0% | |
| CCTAAAACTTGTGAACGAAG+TGG | + | chr8.3:21024407-21024426 | None:intergenic | 40.0% | |
| GAAGAGTTGTTGGATCTATG+AGG | - | chr8.3:21025643-21025662 | MS.gene72343:CDS | 40.0% | |
| GAGAAGTGAAGGAAGAAACT+GGG | - | chr8.3:21026401-21026420 | MS.gene72343:CDS | 40.0% | |
| GCAAATGCATCACATCAAGT+CGG | - | chr8.3:21025771-21025790 | MS.gene72343:intron | 40.0% | |
| GCTTATGTTGGGTACAGTTT+AGG | + | chr8.3:21026264-21026283 | None:intergenic | 40.0% | |
| GGATTGTGTGGTAACCTATT+TGG | + | chr8.3:21024938-21024957 | None:intergenic | 40.0% | |
| TGCCAAATAAGTGTCATCTG+AGG | + | chr8.3:21024777-21024796 | None:intergenic | 40.0% | |
| TGCCTCAGATGACACTTATT+TGG | - | chr8.3:21024772-21024791 | MS.gene72343:intron | 40.0% | |
| TGCTAGATGATGCTTTCACT+AGG | + | chr8.3:21025043-21025062 | None:intergenic | 40.0% | |
| TTAGGGGAAATCGTGTAAAC+TGG | + | chr8.3:21026246-21026265 | None:intergenic | 40.0% | |
| TTCTAGGCATGTACACAATG+TGG | - | chr8.3:21026730-21026749 | MS.gene72343:intron | 40.0% | |
| ! | AGCATAGATGCAAAGGCATA+TGG | + | chr8.3:21024959-21024978 | None:intergenic | 40.0% |
| ! | CCACTTCGTTCACAAGTTTT+AGG | - | chr8.3:21024404-21024423 | MS.gene72343:CDS | 40.0% |
| !! | ACTAGACTCATTTTGGTCTC+AGG | - | chr8.3:21025668-21025687 | MS.gene72343:CDS | 40.0% |
| !! | CCTTTGATGATGAGTATGGA+GGG | - | chr8.3:21024900-21024919 | MS.gene72343:intron | 40.0% |
| !! | GATGCCTTTGATGATGAGTA+TGG | - | chr8.3:21024896-21024915 | MS.gene72343:intron | 40.0% |
| !!! | TGGCTTTTTAGTTACCTCTG+CGG | + | chr8.3:21024468-21024487 | None:intergenic | 40.0% |
| AGGAGCTGTAAGAGAAGTGA+AGG | - | chr8.3:21026390-21026409 | MS.gene72343:CDS | 45.0% | |
| CAGGCAGAGGAGATTTATAC+AGG | - | chr8.3:21026370-21026389 | MS.gene72343:intron | 45.0% | |
| CATCTGTTTCCCTTTGAACC+AGG | + | chr8.3:21026086-21026105 | None:intergenic | 45.0% | |
| CATTGTTCTCCTGCAACTCT+TGG | - | chr8.3:21025980-21025999 | MS.gene72343:intron | 45.0% | |
| CCCTCCATACTCATCATCAA+AGG | + | chr8.3:21024903-21024922 | None:intergenic | 45.0% | |
| CGTCTTGGGAAACGTTATTG+TGG | - | chr8.3:21026929-21026948 | MS.gene72343:CDS | 45.0% | |
| GCATCACATCAAGTCGGAAT+CGG | - | chr8.3:21025777-21025796 | MS.gene72343:intron | 45.0% | |
| TCGCTTGTGTGAATTGTCTC+AGG | - | chr8.3:21026351-21026370 | MS.gene72343:intron | 45.0% | |
| TCTTAACTCTCCGGTTCTCA+GGG | - | chr8.3:21024571-21024590 | MS.gene72343:CDS | 45.0% | |
| TCTTGTTCCAGTTGCTGTCA+AGG | - | chr8.3:21025139-21025158 | MS.gene72343:intron | 45.0% | |
| TGCAGGGAAAGAAGGGAATT+TGG | - | chr8.3:21025090-21025109 | MS.gene72343:intron | 45.0% | |
| TGCTCTACAAACTCAACCAG+TGG | + | chr8.3:21026854-21026873 | None:intergenic | 45.0% | |
| ! | GAGGTTTTGCAGGGAAAGAA+GGG | - | chr8.3:21025083-21025102 | MS.gene72343:intron | 45.0% |
| ! | GCAAAGGCATATGGATTGTG+TGG | + | chr8.3:21024950-21024969 | None:intergenic | 45.0% |
| ! | GGCCTTTGGAAAATACCAAC+TGG | - | chr8.3:21026001-21026020 | MS.gene72343:intron | 45.0% |
| ! | TGAGGTTTTGCAGGGAAAGA+AGG | - | chr8.3:21025082-21025101 | MS.gene72343:intron | 45.0% |
| !! | GACTCATTTTGGTCTCAGGA+AGG | - | chr8.3:21025672-21025691 | MS.gene72343:CDS | 45.0% |
| !! | GCCTTTGATGATGAGTATGG+AGG | - | chr8.3:21024899-21024918 | MS.gene72343:intron | 45.0% |
| AACAGCAGCCCTGGTTCAAA+GGG | - | chr8.3:21026074-21026093 | MS.gene72343:intron | 50.0% | |
| AGGAGCAAAATGGATGCCAC+TGG | - | chr8.3:21026835-21026854 | MS.gene72343:intron | 50.0% | |
| AGGCCAAACTCCGGATTATC+AGG | + | chr8.3:21024604-21024623 | None:intergenic | 50.0% | |
| AGTTGTTAGAACAGCAGCCC+TGG | - | chr8.3:21026065-21026084 | MS.gene72343:intron | 50.0% | |
| GACCCTGATAATCCGGAGTT+TGG | - | chr8.3:21024598-21024617 | MS.gene72343:CDS | 50.0% | |
| GGCCAAACTCCGGATTATCA+GGG | + | chr8.3:21024603-21024622 | None:intergenic | 50.0% | |
| GGGAAACGACCCTGATAATC+CGG | - | chr8.3:21024591-21024610 | MS.gene72343:CDS | 50.0% | |
| GTCTTAACTCTCCGGTTCTC+AGG | - | chr8.3:21024570-21024589 | MS.gene72343:CDS | 50.0% | |
| GTGTGAATTGTCTCAGGCAG+AGG | - | chr8.3:21026357-21026376 | MS.gene72343:intron | 50.0% | |
| TCACATCAAGTCGGAATCGG+AGG | - | chr8.3:21025780-21025799 | MS.gene72343:intron | 50.0% | |
| TTCCAAAGGCCAAGAGTTGC+AGG | + | chr8.3:21025992-21026011 | None:intergenic | 50.0% | |
| ! | GCATTTGCTGGAAGCATGCA+AGG | + | chr8.3:21025759-21025778 | None:intergenic | 50.0% |
| !! | TCACATATCCTGGCTCTGCA+TGG | + | chr8.3:21025710-21025729 | None:intergenic | 50.0% |
| !!! | GAACTTTTTTGCCAACGCGG+TGG | + | chr8.3:21025486-21025505 | None:intergenic | 50.0% |
| AAGCAAAAAGGCCACCGCGT+TGG | - | chr8.3:21025472-21025491 | MS.gene72343:intron | 55.0% | |
| AGGGTCGTTTCCCTGAGAAC+CGG | + | chr8.3:21024584-21024603 | None:intergenic | 55.0% | |
| CAATACCACCATGCAGAGCC+AGG | - | chr8.3:21025699-21025718 | MS.gene72343:intron | 55.0% | |
| CTTACCTCGAGGCCAAACTC+CGG | + | chr8.3:21024613-21024632 | None:intergenic | 55.0% | |
| GAACAGCAGCCCTGGTTCAA+AGG | - | chr8.3:21026073-21026092 | MS.gene72343:intron | 55.0% | |
| TAATCCGGAGTTTGGCCTCG+AGG | - | chr8.3:21024606-21024625 | MS.gene72343:CDS | 55.0% | |
| ! | CTCCTGCAACTCTTGGCCTT+TGG | - | chr8.3:21025987-21026006 | MS.gene72343:intron | 55.0% |
| ! | GGAAGCATGCAAGGTCCTTC+AGG | + | chr8.3:21025750-21025769 | None:intergenic | 55.0% |
| !! | CATATCCTGGCTCTGCATGG+TGG | + | chr8.3:21025707-21025726 | None:intergenic | 55.0% |
| CCTCTGCGGCACTTGAACTG+AGG | + | chr8.3:21024454-21024473 | None:intergenic | 60.0% | |
| ! | CCTCAGTTCAAGTGCCGCAG+AGG | - | chr8.3:21024451-21024470 | MS.gene72343:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21024343 | 21027051 | 21024343 | ID=MS.gene72343 |
| chr8.3 | mRNA | 21024343 | 21027051 | 21024343 | ID=MS.gene72343.t1;Parent=MS.gene72343 |
| chr8.3 | exon | 21026922 | 21027051 | 21026922 | ID=MS.gene72343.t1.exon1;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21026922 | 21027051 | 21026922 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21026385 | 21026644 | 21026385 | ID=MS.gene72343.t1.exon2;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21026385 | 21026644 | 21026385 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21026234 | 21026299 | 21026234 | ID=MS.gene72343.t1.exon3;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21026234 | 21026299 | 21026234 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21025567 | 21025704 | 21025567 | ID=MS.gene72343.t1.exon4;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21025567 | 21025704 | 21025567 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21025358 | 21025435 | 21025358 | ID=MS.gene72343.t1.exon5;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21025358 | 21025435 | 21025358 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21024971 | 21025021 | 21024971 | ID=MS.gene72343.t1.exon6;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21024971 | 21025021 | 21024971 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21024793 | 21024827 | 21024793 | ID=MS.gene72343.t1.exon7;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21024793 | 21024827 | 21024793 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| chr8.3 | exon | 21024343 | 21024658 | 21024343 | ID=MS.gene72343.t1.exon8;Parent=MS.gene72343.t1 |
| chr8.3 | CDS | 21024343 | 21024658 | 21024343 | ID=cds.MS.gene72343.t1;Parent=MS.gene72343.t1 |
| Gene Sequence |
| Protein sequence |
