Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72356.t1 | GAU48229.1 | 94.8 | 231 | 11 | 1 | 1 | 231 | 1 | 230 | 3.20E-113 | 417.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72356.t1 | Q9LD45 | 74.5 | 231 | 57 | 1 | 1 | 231 | 1 | 229 | 4.4e-95 | 349.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72356.t1 | A0A2Z6PN70 | 94.8 | 231 | 11 | 1 | 1 | 231 | 1 | 230 | 2.3e-113 | 417.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene39943 | MS.gene72356 | PPI |
| MS.gene50537 | MS.gene72356 | PPI |
| MS.gene72356 | MS.gene49377 | PPI |
| MS.gene72356 | MS.gene036189 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72356.t1 | MTR_5g013340 | 74.486 | 243 | 57 | 1 | 1 | 243 | 1 | 238 | 1.00e-126 | 359 |
| MS.gene72356.t1 | MTR_5g013340 | 73.077 | 182 | 44 | 1 | 1 | 182 | 1 | 177 | 5.36e-89 | 262 |
| MS.gene72356.t1 | MTR_6g083250 | 60.127 | 158 | 60 | 1 | 18 | 172 | 3 | 160 | 5.55e-65 | 200 |
| MS.gene72356.t1 | MTR_4g099430 | 67.262 | 168 | 25 | 5 | 16 | 181 | 26 | 165 | 5.04e-48 | 159 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72356.t1 | AT5G47120 | 74.059 | 239 | 60 | 1 | 1 | 239 | 1 | 237 | 3.71e-122 | 348 |
| MS.gene72356.t1 | AT4G17580 | 52.459 | 244 | 99 | 3 | 19 | 249 | 8 | 247 | 2.46e-79 | 239 |
| MS.gene72356.t1 | AT5G47130 | 48.018 | 227 | 114 | 3 | 22 | 247 | 2 | 225 | 9.96e-71 | 216 |
| MS.gene72356.t1 | AT5G47130 | 47.847 | 209 | 105 | 3 | 40 | 247 | 2 | 207 | 6.62e-62 | 193 |
| MS.gene72356.t1 | AT5G47130 | 46.774 | 186 | 95 | 3 | 63 | 247 | 4 | 186 | 7.16e-53 | 169 |
Find 60 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGTTTGCAGTTGTATTT+TGG | 0.086503 | 8.3:+21231171 | MS.gene72356:intron |
| GATGGCTTCCGCTCTGTTTC+AGG | 0.112158 | 8.3:+21230362 | MS.gene72356:CDS |
| CTTGGTGGCTTGCTTTCTTC+TGG | 0.117176 | 8.3:+21230959 | MS.gene72356:CDS |
| GAGCATTTCTTCATGTATTA+TGG | 0.171606 | 8.3:+21230126 | MS.gene72356:CDS |
| CTGTTTCAGGGTGCCTCTAT+TGG | 0.219600 | 8.3:+21230375 | MS.gene72356:CDS |
| CTCACTACACTCGCCTGTTT+TGG | 0.230680 | 8.3:+21230164 | MS.gene72356:CDS |
| TGGCTATTGCTATCGATTCT+AGG | 0.248458 | 8.3:+21230412 | MS.gene72356:CDS |
| CTTCATGTATTATGGAATAT+TGG | 0.281802 | 8.3:+21230134 | MS.gene72356:CDS |
| TATTGGACCCTTGATTGATT+TGG | 0.290110 | 8.3:+21230392 | MS.gene72356:CDS |
| GAGCCCTTTCAATTATTTCT+TGG | 0.293452 | 8.3:-21231230 | None:intergenic |
| ATAATTGAAAGGGCTCATTT+TGG | 0.300174 | 8.3:+21231237 | MS.gene72356:CDS |
| CACATTTGTGGCAACTTCCT+TGG | 0.311725 | 8.3:+21230880 | MS.gene72356:CDS |
| TGTACGGATTCTTGTTATAT+TGG | 0.311859 | 8.3:+21231317 | MS.gene72356:CDS |
| AAAGAGGTTGTCTTTGTTGA+TGG | 0.349341 | 8.3:+21230344 | MS.gene72356:CDS |
| TACTGCACTCTTTAAGTTTG+AGG | 0.357711 | 8.3:+21231033 | MS.gene72356:CDS |
| TTGGTGGCTTGCTTTCTTCT+GGG | 0.360140 | 8.3:+21230960 | MS.gene72356:CDS |
| GCTATTGCTGCTTCAGCTGT+TGG | 0.373114 | 8.3:+21230104 | MS.gene72356:CDS |
| AGCCCTTTCAATTATTTCTT+GGG | 0.377783 | 8.3:-21231229 | None:intergenic |
| CCAAATGATGGTTCCAAAAC+AGG | 0.378513 | 8.3:-21230177 | None:intergenic |
| TTGCAGCTAAATCAGTGAAC+AGG | 0.391119 | 8.3:-21231290 | None:intergenic |
| ATGTTTCTCAGCAGCAGCTT+TGG | 0.392700 | 8.3:+21230910 | MS.gene72356:CDS |
| CAGCTTTGGTTGCGAGGCGT+AGG | 0.408062 | 8.3:+21230924 | MS.gene72356:CDS |
| ATGGCTTCCGCTCTGTTTCA+GGG | 0.410687 | 8.3:+21230363 | MS.gene72356:CDS |
| CCACAAATGTGGTAAGGATT+AGG | 0.413130 | 8.3:-21230868 | None:intergenic |
| TAAATTCATACCTCTTCAAA+AGG | 0.427460 | 8.3:-21230215 | None:intergenic |
| CTGGGTTGTCTATTCTTATG+TGG | 0.428747 | 8.3:+21230978 | MS.gene72356:CDS |
| CCTAATCCTTACCACATTTG+TGG | 0.443553 | 8.3:+21230868 | MS.gene72356:CDS |
| TTTGCTTCCTCTGTCTTTGG+TGG | 0.444710 | 8.3:+21231007 | MS.gene72356:CDS |
| CAGCAGCAGCTTTGGTTGCG+AGG | 0.467819 | 8.3:+21230918 | MS.gene72356:CDS |
| CACCCAAGAAATAATTGAAA+GGG | 0.472931 | 8.3:+21231227 | MS.gene72356:CDS |
| AGCAATAGCCAAATCAATCA+AGG | 0.473775 | 8.3:-21230400 | None:intergenic |
| ATCAATCAAGGGTCCAATAG+AGG | 0.481600 | 8.3:-21230388 | None:intergenic |
| TCGTTCAGAATCACATCAAA+CGG | 0.483793 | 8.3:+21229953 | MS.gene72356:CDS |
| TTGATGTGATTCTGAACGAC+GGG | 0.491066 | 8.3:-21229949 | None:intergenic |
| GATTTGACGGAAATTCTTGA+GGG | 0.494951 | 8.3:-21229923 | None:intergenic |
| ATTTAGCTGCAATCTTTGTA+CGG | 0.506119 | 8.3:+21231301 | MS.gene72356:CDS |
| CTTCTTCCTCTAGAAACCGT+TGG | 0.508479 | 8.3:+21229890 | MS.gene72356:CDS |
| CATGTATTATGGAATATTGG+AGG | 0.514242 | 8.3:+21230137 | MS.gene72356:CDS |
| AGCTTTGGTTGCGAGGCGTA+GGG | 0.525893 | 8.3:+21230925 | MS.gene72356:CDS |
| AGATTTGACGGAAATTCTTG+AGG | 0.543851 | 8.3:-21229924 | None:intergenic |
| CGTTCAGAATCACATCAAAC+GGG | 0.545451 | 8.3:+21229954 | MS.gene72356:CDS |
| ACACCCAAGAAATAATTGAA+AGG | 0.554681 | 8.3:+21231226 | MS.gene72356:CDS |
| TGTAGATAACAACCAAATGA+TGG | 0.564410 | 8.3:-21230189 | None:intergenic |
| TGAGGGAATCATAATTCCAA+CGG | 0.564853 | 8.3:-21229906 | None:intergenic |
| CAGAAGAAAGCAAGCCACCA+AGG | 0.571791 | 8.3:-21230958 | None:intergenic |
| AAGTTGCCACAAATGTGGTA+AGG | 0.580524 | 8.3:-21230874 | None:intergenic |
| AGGGAGTATCTCTACCTTGG+TGG | 0.580873 | 8.3:+21230944 | MS.gene72356:CDS |
| CGTAGGGAGTATCTCTACCT+TGG | 0.583177 | 8.3:+21230941 | MS.gene72356:CDS |
| ATTCATACCTCTTCAAAAGG+AGG | 0.586956 | 8.3:-21230212 | None:intergenic |
| TGCTGCTGAGAAACATGCAA+AGG | 0.591246 | 8.3:-21230903 | None:intergenic |
| ATAATTCCAACGGTTTCTAG+AGG | 0.597479 | 8.3:-21229896 | None:intergenic |
| TGAGAAACATGCAAAGGCCA+AGG | 0.602323 | 8.3:-21230897 | None:intergenic |
| CAAGGAAGTTGCCACAAATG+TGG | 0.618201 | 8.3:-21230879 | None:intergenic |
| GCAATAGCCAAATCAATCAA+GGG | 0.625293 | 8.3:-21230399 | None:intergenic |
| TTTGATGTGATTCTGAACGA+CGG | 0.630224 | 8.3:-21229950 | None:intergenic |
| TGCAGCTAAATCAGTGAACA+GGG | 0.632060 | 8.3:-21231289 | None:intergenic |
| AGTAGAACCACCAAAGACAG+AGG | 0.657451 | 8.3:-21231014 | None:intergenic |
| GATGTGATTCTGAACGACGG+GGG | 0.673838 | 8.3:-21229947 | None:intergenic |
| TGATGTGATTCTGAACGACG+GGG | 0.711262 | 8.3:-21229948 | None:intergenic |
| AGAGGCACCCTGAAACAGAG+CGG | 0.755453 | 8.3:-21230370 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TACAATTGAGTAAATTAAAA+TGG | - | chr8.3:21230755-21230774 | None:intergenic | 15.0% |
| !! | GAAATTGATGAAATTTATGA+AGG | - | chr8.3:21230009-21230028 | None:intergenic | 20.0% |
| !! | TAACTTATGAAAACAGTTTA+TGG | - | chr8.3:21230597-21230616 | None:intergenic | 20.0% |
| !!! | ACTTTTTACGTTTTTTAGTT+TGG | + | chr8.3:21231354-21231373 | MS.gene72356:intron | 20.0% |
| !!! | TTATTGCATTTTGATCATTT+TGG | + | chr8.3:21230484-21230503 | MS.gene72356:intron | 20.0% |
| ! | AATTTATGAGAACAACTTAC+TGG | - | chr8.3:21230672-21230691 | None:intergenic | 25.0% |
| ! | ATGAAAATAATCTTATCCGT+TGG | + | chr8.3:21230047-21230066 | MS.gene72356:intron | 25.0% |
| ! | ATTTAGATATGTTCGATTGA+AGG | - | chr8.3:21230727-21230746 | None:intergenic | 25.0% |
| ! | CTTCATGTATTATGGAATAT+TGG | + | chr8.3:21230134-21230153 | MS.gene72356:CDS | 25.0% |
| ! | TAAATTCATACCTCTTCAAA+AGG | - | chr8.3:21230218-21230237 | None:intergenic | 25.0% |
| ! | TAGTTTGGATTATTCTTTGT+TGG | + | chr8.3:21231369-21231388 | MS.gene72356:intron | 25.0% |
| ! | TATAATTGCTTATCCAAACA+TGG | - | chr8.3:21230524-21230543 | None:intergenic | 25.0% |
| ! | TTGAATAAAACACCTTATTG+AGG | + | chr8.3:21231140-21231159 | MS.gene72356:intron | 25.0% |
| !! | AAAGGCATATAGGATAATAT+AGG | - | chr8.3:21231122-21231141 | None:intergenic | 25.0% |
| !! | ACTGTTTTCATAAGTTATCT+TGG | + | chr8.3:21230600-21230619 | MS.gene72356:intron | 25.0% |
| !!! | ATACTGTTAGTTTTGGATTT+TGG | + | chr8.3:21230811-21230830 | MS.gene72356:intron | 25.0% |
| !!! | ATGTTATGTGGTTTGTTATT+GGG | + | chr8.3:21230271-21230290 | MS.gene72356:intron | 25.0% |
| !!! | CAATAAGGTGTTTTATTCAA+AGG | - | chr8.3:21231140-21231159 | None:intergenic | 25.0% |
| !!! | TATGTTATGTGGTTTGTTAT+TGG | + | chr8.3:21230270-21230289 | MS.gene72356:intron | 25.0% |
| !!! | TCATTTTGGTTTTGAGTTTT+TGG | + | chr8.3:21230498-21230517 | MS.gene72356:intron | 25.0% |
| !!! | TGTTTTATTCAAAGGCATAT+AGG | - | chr8.3:21231132-21231151 | None:intergenic | 25.0% |
| !!! | TTGACTTATACTGTTAGTTT+TGG | + | chr8.3:21230804-21230823 | MS.gene72356:intron | 25.0% |
| AACTAATTGTGAGTCTGTTT+GGG | - | chr8.3:21230697-21230716 | None:intergenic | 30.0% | |
| ACACCCAAGAAATAATTGAA+AGG | + | chr8.3:21231226-21231245 | MS.gene72356:CDS | 30.0% | |
| AGCACTTAAAATTGCAATGA+AGG | - | chr8.3:21230450-21230469 | None:intergenic | 30.0% | |
| ATGCATGTAGTTATGTTATG+TGG | + | chr8.3:21230259-21230278 | MS.gene72356:intron | 30.0% | |
| ATTTAGCTGCAATCTTTGTA+CGG | + | chr8.3:21231301-21231320 | MS.gene72356:CDS | 30.0% | |
| CACCCAAGAAATAATTGAAA+GGG | + | chr8.3:21231227-21231246 | MS.gene72356:CDS | 30.0% | |
| CATGTATTATGGAATATTGG+AGG | + | chr8.3:21230137-21230156 | MS.gene72356:CDS | 30.0% | |
| GAGCATTTCTTCATGTATTA+TGG | + | chr8.3:21230126-21230145 | MS.gene72356:CDS | 30.0% | |
| TATGTCAATACCAAATCATC+AGG | - | chr8.3:21231396-21231415 | None:intergenic | 30.0% | |
| TGCTACAAACTTAGTGAAAT+TGG | + | chr8.3:21231087-21231106 | MS.gene72356:intron | 30.0% | |
| TGTAGATAACAACCAAATGA+TGG | - | chr8.3:21230192-21230211 | None:intergenic | 30.0% | |
| ! | AGCCCTTTCAATTATTTCTT+GGG | - | chr8.3:21231232-21231251 | None:intergenic | 30.0% |
| ! | ATAATTGAAAGGGCTCATTT+TGG | + | chr8.3:21231237-21231256 | MS.gene72356:CDS | 30.0% |
| ! | CTTGTTTGCAGTTGTATTTT+GGG | + | chr8.3:21231172-21231191 | MS.gene72356:intron | 30.0% |
| ! | TGTACGGATTCTTGTTATAT+TGG | + | chr8.3:21231317-21231336 | MS.gene72356:CDS | 30.0% |
| ! | TTCTTGTTATATTGGTGAGT+TGG | + | chr8.3:21231325-21231344 | MS.gene72356:intron | 30.0% |
| AAAGAGGTTGTCTTTGTTGA+TGG | + | chr8.3:21230344-21230363 | MS.gene72356:CDS | 35.0% | |
| AACCTGCAATCAATTTCCAA+CGG | - | chr8.3:21230066-21230085 | None:intergenic | 35.0% | |
| AGATTTGACGGAAATTCTTG+AGG | - | chr8.3:21229927-21229946 | None:intergenic | 35.0% | |
| AGCAATAGCCAAATCAATCA+AGG | - | chr8.3:21230403-21230422 | None:intergenic | 35.0% | |
| ATTCATACCTCTTCAAAAGG+AGG | - | chr8.3:21230215-21230234 | None:intergenic | 35.0% | |
| GAACTAATTGTGAGTCTGTT+TGG | - | chr8.3:21230698-21230717 | None:intergenic | 35.0% | |
| GATTTGACGGAAATTCTTGA+GGG | - | chr8.3:21229926-21229945 | None:intergenic | 35.0% | |
| GCAATAGCCAAATCAATCAA+GGG | - | chr8.3:21230402-21230421 | None:intergenic | 35.0% | |
| TATTGGACCCTTGATTGATT+TGG | + | chr8.3:21230392-21230411 | MS.gene72356:CDS | 35.0% | |
| TCGTTCAGAATCACATCAAA+CGG | + | chr8.3:21229953-21229972 | MS.gene72356:CDS | 35.0% | |
| TGAGGGAATCATAATTCCAA+CGG | - | chr8.3:21229909-21229928 | None:intergenic | 35.0% | |
| TTTGATGTGATTCTGAACGA+CGG | - | chr8.3:21229953-21229972 | None:intergenic | 35.0% | |
| ! | ATAATTCCAACGGTTTCTAG+AGG | - | chr8.3:21229899-21229918 | None:intergenic | 35.0% |
| ! | GAGCCCTTTCAATTATTTCT+TGG | - | chr8.3:21231233-21231252 | None:intergenic | 35.0% |
| ! | GCTTGTTTGCAGTTGTATTT+TGG | + | chr8.3:21231171-21231190 | MS.gene72356:intron | 35.0% |
| ! | GTACTTCTTTTCAGCAAAAG+AGG | + | chr8.3:21230328-21230347 | MS.gene72356:intron | 35.0% |
| ! | TACTGCACTCTTTAAGTTTG+AGG | + | chr8.3:21231033-21231052 | MS.gene72356:CDS | 35.0% |
| !! | ATTGGGTTGTTGTGGTATTT+TGG | + | chr8.3:21230288-21230307 | MS.gene72356:intron | 35.0% |
| !! | CTTCTTCCTCTCATTTTTCT+CGG | - | chr8.3:21231453-21231472 | None:intergenic | 35.0% |
| !!! | TTTGAGTTTTTGGCCATGTT+TGG | + | chr8.3:21230508-21230527 | MS.gene72356:intron | 35.0% |
| AAGCAAGCAAGACCTCAATA+AGG | - | chr8.3:21231155-21231174 | None:intergenic | 40.0% | |
| AAGTTGCCACAAATGTGGTA+AGG | - | chr8.3:21230877-21230896 | None:intergenic | 40.0% | |
| ATCAATCAAGGGTCCAATAG+AGG | - | chr8.3:21230391-21230410 | None:intergenic | 40.0% | |
| ATCCGTTGGAAATTGATTGC+AGG | + | chr8.3:21230061-21230080 | MS.gene72356:intron | 40.0% | |
| ATTCAGCCGAGAAAAATGAG+AGG | + | chr8.3:21231444-21231463 | MS.gene72356:CDS | 40.0% | |
| CCAAATGATGGTTCCAAAAC+AGG | - | chr8.3:21230180-21230199 | None:intergenic | 40.0% | |
| CCACAAATGTGGTAAGGATT+AGG | - | chr8.3:21230871-21230890 | None:intergenic | 40.0% | |
| CCTAATCCTTACCACATTTG+TGG | + | chr8.3:21230868-21230887 | MS.gene72356:CDS | 40.0% | |
| CGTTCAGAATCACATCAAAC+GGG | + | chr8.3:21229954-21229973 | MS.gene72356:CDS | 40.0% | |
| CTGGGTTGTCTATTCTTATG+TGG | + | chr8.3:21230978-21230997 | MS.gene72356:CDS | 40.0% | |
| CTTTGTTGGTCCTGATGATT+TGG | + | chr8.3:21231383-21231402 | MS.gene72356:intron | 40.0% | |
| TGCAGCTAAATCAGTGAACA+GGG | - | chr8.3:21231292-21231311 | None:intergenic | 40.0% | |
| TTGATGTGATTCTGAACGAC+GGG | - | chr8.3:21229952-21229971 | None:intergenic | 40.0% | |
| TTGCAGCTAAATCAGTGAAC+AGG | - | chr8.3:21231293-21231312 | None:intergenic | 40.0% | |
| ! | CATTTTGCTTCCTCTGTCTT+TGG | + | chr8.3:21231004-21231023 | MS.gene72356:CDS | 40.0% |
| !! | ATCTACACCTCCTTTTGAAG+AGG | + | chr8.3:21230205-21230224 | MS.gene72356:CDS | 40.0% |
| !! | GCAGTTGTATTTTGGGCTTT+TGG | + | chr8.3:21231179-21231198 | MS.gene72356:intron | 40.0% |
| !! | GGTTTGTTATTGGGTTGTTG+TGG | + | chr8.3:21230280-21230299 | MS.gene72356:intron | 40.0% |
| !! | TGGCTATTGCTATCGATTCT+AGG | + | chr8.3:21230412-21230431 | MS.gene72356:CDS | 40.0% |
| !!! | CCTGTTTTGGAACCATCATT+TGG | + | chr8.3:21230177-21230196 | MS.gene72356:CDS | 40.0% |
| !!! | TTTGGGCTTTTGGTGTTTGT+GGG | + | chr8.3:21231189-21231208 | MS.gene72356:CDS | 40.0% |
| !!! | TTTTGGGCTTTTGGTGTTTG+TGG | + | chr8.3:21231188-21231207 | MS.gene72356:CDS | 40.0% |
| AGTAGAACCACCAAAGACAG+AGG | - | chr8.3:21231017-21231036 | None:intergenic | 45.0% | |
| ATGTTTCTCAGCAGCAGCTT+TGG | + | chr8.3:21230910-21230929 | MS.gene72356:CDS | 45.0% | |
| CAAGGAAGTTGCCACAAATG+TGG | - | chr8.3:21230882-21230901 | None:intergenic | 45.0% | |
| CACATTTGTGGCAACTTCCT+TGG | + | chr8.3:21230880-21230899 | MS.gene72356:CDS | 45.0% | |
| TGAGAAACATGCAAAGGCCA+AGG | - | chr8.3:21230900-21230919 | None:intergenic | 45.0% | |
| TGATGTGATTCTGAACGACG+GGG | - | chr8.3:21229951-21229970 | None:intergenic | 45.0% | |
| TGCTGCTGAGAAACATGCAA+AGG | - | chr8.3:21230906-21230925 | None:intergenic | 45.0% | |
| TTTGCTTCCTCTGTCTTTGG+TGG | + | chr8.3:21231007-21231026 | MS.gene72356:CDS | 45.0% | |
| ! | CTTCTTCCTCTAGAAACCGT+TGG | + | chr8.3:21229890-21229909 | MS.gene72356:CDS | 45.0% |
| !! | AAGGGCTCATTTTGGTGATC+TGG | + | chr8.3:21231245-21231264 | MS.gene72356:CDS | 45.0% |
| !! | TTGGTGGCTTGCTTTCTTCT+GGG | + | chr8.3:21230960-21230979 | MS.gene72356:CDS | 45.0% |
| ATGGCTTCCGCTCTGTTTCA+GGG | + | chr8.3:21230363-21230382 | MS.gene72356:CDS | 50.0% | |
| CAGAAGAAAGCAAGCCACCA+AGG | - | chr8.3:21230961-21230980 | None:intergenic | 50.0% | |
| GATGTGATTCTGAACGACGG+GGG | - | chr8.3:21229950-21229969 | None:intergenic | 50.0% | |
| ! | CTCACTACACTCGCCTGTTT+TGG | + | chr8.3:21230164-21230183 | MS.gene72356:CDS | 50.0% |
| ! | CTGTTTCAGGGTGCCTCTAT+TGG | + | chr8.3:21230375-21230394 | MS.gene72356:CDS | 50.0% |
| ! | GCTATTGCTGCTTCAGCTGT+TGG | + | chr8.3:21230104-21230123 | MS.gene72356:CDS | 50.0% |
| !! | AGGGAGTATCTCTACCTTGG+TGG | + | chr8.3:21230944-21230963 | MS.gene72356:CDS | 50.0% |
| !! | CGTAGGGAGTATCTCTACCT+TGG | + | chr8.3:21230941-21230960 | MS.gene72356:CDS | 50.0% |
| !! | CTTGGTGGCTTGCTTTCTTC+TGG | + | chr8.3:21230959-21230978 | MS.gene72356:CDS | 50.0% |
| GAACGACGGGGGAGATTTGA+CGG | - | chr8.3:21229939-21229958 | None:intergenic | 55.0% | |
| GATGGCTTCCGCTCTGTTTC+AGG | + | chr8.3:21230362-21230381 | MS.gene72356:CDS | 55.0% | |
| ! | AGCTTTGGTTGCGAGGCGTA+GGG | + | chr8.3:21230925-21230944 | MS.gene72356:CDS | 55.0% |
| !! | AGAGGCACCCTGAAACAGAG+CGG | - | chr8.3:21230373-21230392 | None:intergenic | 55.0% |
| ! | CAGCAGCAGCTTTGGTTGCG+AGG | + | chr8.3:21230918-21230937 | MS.gene72356:CDS | 60.0% |
| ! | CAGCTTTGGTTGCGAGGCGT+AGG | + | chr8.3:21230924-21230943 | MS.gene72356:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 21229856 | 21231487 | 21229856 | ID=MS.gene72356 |
| chr8.3 | mRNA | 21229856 | 21231487 | 21229856 | ID=MS.gene72356.t1;Parent=MS.gene72356 |
| chr8.3 | exon | 21229856 | 21229975 | 21229856 | ID=MS.gene72356.t1.exon1;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21229856 | 21229975 | 21229856 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| chr8.3 | exon | 21230083 | 21230226 | 21230083 | ID=MS.gene72356.t1.exon2;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21230083 | 21230226 | 21230083 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| chr8.3 | exon | 21230342 | 21230433 | 21230342 | ID=MS.gene72356.t1.exon3;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21230342 | 21230433 | 21230342 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| chr8.3 | exon | 21230868 | 21231054 | 21230868 | ID=MS.gene72356.t1.exon4;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21230868 | 21231054 | 21230868 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| chr8.3 | exon | 21231183 | 21231338 | 21231183 | ID=MS.gene72356.t1.exon5;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21231183 | 21231338 | 21231183 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| chr8.3 | exon | 21231437 | 21231487 | 21231437 | ID=MS.gene72356.t1.exon6;Parent=MS.gene72356.t1 |
| chr8.3 | CDS | 21231437 | 21231487 | 21231437 | ID=cds.MS.gene72356.t1;Parent=MS.gene72356.t1 |
| Gene Sequence |
| Protein sequence |
