Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72585.t1 | XP_013442399.1 | 97.9 | 427 | 9 | 0 | 1 | 427 | 45 | 471 | 4.80E-258 | 899.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72585.t1 | Q09131 | 84.1 | 427 | 68 | 0 | 1 | 427 | 38 | 464 | 1.4e-226 | 786.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72585.t1 | A0A072TFW4 | 97.9 | 427 | 9 | 0 | 1 | 427 | 45 | 471 | 3.5e-258 | 899.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72585 | MS.gene58198 | PPI |
| MS.gene72585 | MS.gene58016 | PPI |
| MS.gene72585 | MS.gene58017 | PPI |
| MS.gene72585 | MS.gene58221 | PPI |
| MS.gene72585 | MS.gene036701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72585.t1 | MTR_0188s0020 | 97.892 | 427 | 9 | 0 | 1 | 427 | 45 | 471 | 0.0 | 875 |
| MS.gene72585.t1 | MTR_4g037105 | 87.354 | 427 | 54 | 0 | 1 | 427 | 39 | 465 | 0.0 | 793 |
| MS.gene72585.t1 | MTR_1g112630 | 84.579 | 428 | 65 | 1 | 1 | 427 | 40 | 467 | 0.0 | 767 |
| MS.gene72585.t1 | MTR_4g115670 | 61.779 | 416 | 156 | 2 | 1 | 415 | 39 | 452 | 0.0 | 541 |
| MS.gene72585.t1 | MTR_3g051240 | 44.810 | 395 | 190 | 10 | 17 | 410 | 43 | 410 | 3.73e-102 | 311 |
| MS.gene72585.t1 | MTR_5g092360 | 42.298 | 409 | 208 | 9 | 17 | 424 | 49 | 430 | 5.80e-102 | 310 |
| MS.gene72585.t1 | MTR_1g060360 | 41.772 | 395 | 203 | 8 | 17 | 410 | 46 | 414 | 3.24e-96 | 295 |
| MS.gene72585.t1 | MTR_7g104360 | 42.118 | 406 | 205 | 11 | 15 | 417 | 45 | 423 | 1.05e-95 | 294 |
| MS.gene72585.t1 | MTR_7g104330 | 41.266 | 395 | 205 | 8 | 17 | 410 | 54 | 422 | 9.27e-95 | 292 |
| MS.gene72585.t1 | MTR_3g083810 | 37.313 | 402 | 177 | 9 | 71 | 413 | 143 | 528 | 3.68e-75 | 244 |
| MS.gene72585.t1 | MTR_3g083820 | 36.816 | 402 | 179 | 8 | 71 | 413 | 143 | 528 | 4.28e-74 | 241 |
| MS.gene72585.t1 | MTR_7g056403 | 34.862 | 436 | 202 | 10 | 44 | 413 | 108 | 527 | 1.46e-73 | 240 |
| MS.gene72585.t1 | MTR_6g013050 | 31.445 | 512 | 249 | 14 | 1 | 426 | 55 | 550 | 7.04e-72 | 237 |
| MS.gene72585.t1 | MTR_6g013050 | 31.087 | 460 | 225 | 11 | 1 | 384 | 55 | 498 | 2.32e-64 | 216 |
| MS.gene72585.t1 | MTR_4g037670 | 27.604 | 384 | 213 | 16 | 17 | 353 | 216 | 581 | 9.27e-26 | 110 |
| MS.gene72585.t1 | MTR_1g052505 | 28.025 | 314 | 178 | 11 | 75 | 353 | 262 | 562 | 2.84e-25 | 108 |
| MS.gene72585.t1 | MTR_3g074930 | 26.923 | 364 | 219 | 15 | 75 | 405 | 256 | 605 | 6.11e-23 | 101 |
| MS.gene72585.t1 | MTR_3g074930 | 26.923 | 364 | 219 | 15 | 75 | 405 | 249 | 598 | 6.32e-23 | 101 |
| MS.gene72585.t1 | MTR_4g103520 | 27.717 | 368 | 211 | 17 | 75 | 405 | 176 | 525 | 1.99e-22 | 100 |
| MS.gene72585.t1 | MTR_4g103520 | 27.717 | 368 | 211 | 17 | 75 | 405 | 253 | 602 | 2.73e-22 | 99.8 |
| MS.gene72585.t1 | MTR_4g082930 | 25.000 | 444 | 264 | 14 | 16 | 402 | 143 | 574 | 2.85e-22 | 99.8 |
| MS.gene72585.t1 | MTR_5g045600 | 26.400 | 375 | 207 | 15 | 75 | 405 | 245 | 594 | 9.06e-22 | 98.2 |
| MS.gene72585.t1 | MTR_8g063080 | 25.269 | 372 | 215 | 14 | 75 | 405 | 238 | 587 | 3.61e-21 | 96.3 |
| MS.gene72585.t1 | MTR_4g082940 | 25.630 | 238 | 150 | 8 | 183 | 402 | 332 | 560 | 2.07e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72585.t1 | AT2G16430 | 78.622 | 421 | 90 | 0 | 1 | 421 | 43 | 463 | 0.0 | 705 |
| MS.gene72585.t1 | AT2G27190 | 72.771 | 415 | 113 | 0 | 1 | 415 | 44 | 458 | 0.0 | 656 |
| MS.gene72585.t1 | AT1G56360 | 65.796 | 421 | 137 | 3 | 6 | 420 | 39 | 458 | 0.0 | 585 |
| MS.gene72585.t1 | AT2G16430 | 81.009 | 337 | 64 | 0 | 85 | 421 | 7 | 343 | 0.0 | 584 |
| MS.gene72585.t1 | AT4G36350 | 64.048 | 420 | 145 | 3 | 6 | 420 | 40 | 458 | 0.0 | 574 |
| MS.gene72585.t1 | AT5G34850 | 60.577 | 416 | 161 | 2 | 1 | 415 | 38 | 451 | 0.0 | 540 |
| MS.gene72585.t1 | AT2G18130 | 58.950 | 419 | 148 | 4 | 6 | 421 | 43 | 440 | 0.0 | 513 |
| MS.gene72585.t1 | AT3G46120 | 49.052 | 422 | 128 | 9 | 1 | 415 | 40 | 381 | 1.02e-131 | 384 |
| MS.gene72585.t1 | AT1G52940 | 61.667 | 240 | 87 | 4 | 6 | 242 | 4 | 241 | 8.34e-105 | 310 |
| MS.gene72585.t1 | AT3G20500 | 43.325 | 397 | 197 | 9 | 15 | 410 | 45 | 414 | 6.90e-99 | 302 |
| MS.gene72585.t1 | AT3G52820 | 41.919 | 396 | 201 | 8 | 17 | 410 | 47 | 415 | 1.09e-96 | 296 |
| MS.gene72585.t1 | AT3G52780 | 41.709 | 398 | 203 | 10 | 17 | 410 | 44 | 416 | 1.79e-90 | 280 |
| MS.gene72585.t1 | AT3G52810 | 41.667 | 396 | 202 | 8 | 17 | 410 | 51 | 419 | 6.25e-90 | 279 |
| MS.gene72585.t1 | AT3G07130 | 35.714 | 420 | 197 | 11 | 51 | 413 | 115 | 518 | 7.93e-73 | 238 |
| MS.gene72585.t1 | AT3G07130 | 33.113 | 453 | 197 | 12 | 51 | 413 | 115 | 551 | 6.95e-66 | 220 |
| MS.gene72585.t1 | AT2G32770 | 35.101 | 396 | 177 | 9 | 69 | 399 | 143 | 523 | 2.20e-65 | 219 |
| MS.gene72585.t1 | AT4G13700 | 36.559 | 372 | 177 | 10 | 34 | 362 | 80 | 435 | 2.64e-63 | 211 |
| MS.gene72585.t1 | AT3G52780 | 39.414 | 307 | 168 | 9 | 17 | 319 | 44 | 336 | 4.64e-58 | 194 |
| MS.gene72585.t1 | AT2G32770 | 33.770 | 382 | 173 | 10 | 69 | 385 | 62 | 428 | 1.60e-57 | 195 |
| MS.gene72585.t1 | AT2G32770 | 31.818 | 396 | 161 | 10 | 69 | 399 | 143 | 494 | 9.26e-52 | 182 |
| MS.gene72585.t1 | AT4G13700 | 35.583 | 326 | 162 | 9 | 34 | 316 | 80 | 400 | 2.67e-51 | 178 |
| MS.gene72585.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 75 | 400 | 237 | 581 | 5.50e-22 | 99.0 |
| MS.gene72585.t1 | AT1G13750 | 27.671 | 365 | 205 | 14 | 75 | 400 | 239 | 583 | 6.28e-22 | 99.0 |
| MS.gene72585.t1 | AT5G50400 | 26.124 | 356 | 222 | 15 | 75 | 400 | 165 | 509 | 6.72e-22 | 98.6 |
| MS.gene72585.t1 | AT2G03450 | 25.556 | 450 | 254 | 16 | 15 | 402 | 141 | 571 | 3.79e-20 | 93.6 |
| MS.gene72585.t1 | AT1G13900 | 23.707 | 464 | 271 | 15 | 1 | 402 | 129 | 571 | 4.66e-20 | 93.2 |
| MS.gene72585.t1 | AT4G24890 | 25.275 | 364 | 225 | 15 | 75 | 405 | 241 | 590 | 4.50e-19 | 90.1 |
Find 95 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCGGAAGCTTACAATTTC+TGG | 0.075652 | 4.1:-61333225 | None:intergenic |
| TCCAACTTCATAATAATATT+TGG | 0.191588 | 4.1:-61332204 | None:intergenic |
| GGAACACAACAAGGCAATTT+TGG | 0.199857 | 4.1:+61332231 | MS.gene72585:CDS |
| ATCTCCGATGTTTATGTATA+CGG | 0.235623 | 4.1:-61334388 | None:intergenic |
| TTGCTTATCAACCTTGGATA+TGG | 0.251792 | 4.1:+61333172 | MS.gene72585:CDS |
| GTACTTTGTGATGCTTTATA+AGG | 0.272518 | 4.1:-61333427 | None:intergenic |
| ATTGCATATAATATCGTAAA+TGG | 0.285493 | 4.1:+61334333 | MS.gene72585:CDS |
| TTATTCATCATGCCACTATA+AGG | 0.295631 | 4.1:+61332077 | MS.gene72585:CDS |
| CACAAAGTACTTCACCCTTT+TGG | 0.304317 | 4.1:+61333440 | MS.gene72585:CDS |
| GGTCGGATGCAGTTCGTTAC+TGG | 0.314903 | 4.1:+61331978 | MS.gene72585:CDS |
| CTGGAGCAAAATCAAGTTCA+TGG | 0.316555 | 4.1:-61333206 | None:intergenic |
| GTGATGCTTTATAAGGAGTA+TGG | 0.325433 | 4.1:-61333420 | None:intergenic |
| AAAGTTGATGTTGTGTTTGC+TGG | 0.344435 | 4.1:+61334148 | MS.gene72585:CDS |
| CCATATACATTTGGTCTCAT+AGG | 0.355502 | 4.1:+61332287 | MS.gene72585:CDS |
| CACCTAACATTGTCATGATT+CGG | 0.364435 | 4.1:-61333117 | None:intergenic |
| CCTATGAGACCAAATGTATA+TGG | 0.368040 | 4.1:-61332287 | None:intergenic |
| AAGAGCTACCGAGAGTTAAC+AGG | 0.373690 | 4.1:+61334008 | MS.gene72585:CDS |
| ACAATGTTAGGTGGGATACT+TGG | 0.374862 | 4.1:+61333127 | MS.gene72585:CDS |
| TCAATGGGAACCATGAGGTT+TGG | 0.378926 | 4.1:-61334955 | None:intergenic |
| TACCTTCAAATTCCTTATAG+TGG | 0.384082 | 4.1:-61332089 | None:intergenic |
| GGACAAACAGTTCTGTTTGT+TGG | 0.384350 | 4.1:+61333069 | MS.gene72585:CDS |
| GTATGGTATCGGTGCGAAAA+AGG | 0.385639 | 4.1:-61333403 | None:intergenic |
| AGATACTTCAATTACTCATC+TGG | 0.391362 | 4.1:+61332052 | MS.gene72585:CDS |
| TTTACAACTCCTCCTGCAAT+TGG | 0.394407 | 4.1:+61332254 | MS.gene72585:CDS |
| GCATTTAGAGAAGCCAGCTT+TGG | 0.397912 | 4.1:+61334804 | MS.gene72585:CDS |
| ACCAAATATTATTATGAAGT+TGG | 0.399228 | 4.1:+61332203 | MS.gene72585:CDS |
| CTGTTAAGAGTGATTCCCTT+TGG | 0.403017 | 4.1:+61334898 | MS.gene72585:CDS |
| CACATTGAGTATTCTTCAAT+GGG | 0.419089 | 4.1:-61334970 | None:intergenic |
| GGCACATCAGGACCAATTGC+AGG | 0.424905 | 4.1:-61332266 | None:intergenic |
| TGGTTATAATGCTCCTCAAC+AGG | 0.425812 | 4.1:+61331192 | MS.gene72585:CDS |
| GTCAGACTTATGATTCAAAC+AGG | 0.429494 | 4.1:+61333013 | MS.gene72585:CDS |
| TGAGGTTTGGAATCATCAAC+CGG | 0.433017 | 4.1:-61334942 | None:intergenic |
| ATTATTATGAAGTTGGACTT+AGG | 0.436283 | 4.1:+61332210 | MS.gene72585:CDS |
| CAATGTTAGGTGGGATACTT+GGG | 0.445086 | 4.1:+61333128 | MS.gene72585:CDS |
| CCTGATGTGCCATATACATT+TGG | 0.446105 | 4.1:+61332278 | MS.gene72585:CDS |
| ACCCGAATCATGACAATGTT+AGG | 0.449055 | 4.1:+61333115 | MS.gene72585:CDS |
| TTGGCCTCATATTCAGCATA+TGG | 0.449605 | 4.1:+61333499 | MS.gene72585:CDS |
| CCAAATGTATATGGCACATC+AGG | 0.453922 | 4.1:-61332278 | None:intergenic |
| TTCAGCACACATCATTGTCT+TGG | 0.481429 | 4.1:+61333480 | MS.gene72585:CDS |
| AATACCATATGCTGAATATG+AGG | 0.494395 | 4.1:-61333503 | None:intergenic |
| ACCTAACATTGTCATGATTC+GGG | 0.496093 | 4.1:-61333116 | None:intergenic |
| TCTCTAAATGCTGAGTACTC+TGG | 0.496127 | 4.1:-61334792 | None:intergenic |
| AGCACAAGAAGCTAGCTAAA+GGG | 0.498611 | 4.1:+61332014 | MS.gene72585:CDS |
| GGACACATGCTTACTATAGC+TGG | 0.517434 | 4.1:+61334853 | MS.gene72585:CDS |
| TATCAATTGAATTCAACAAA+AGG | 0.519489 | 4.1:+61333048 | MS.gene72585:CDS |
| AAGCACAAGAAGCTAGCTAA+AGG | 0.523147 | 4.1:+61332013 | MS.gene72585:CDS |
| TCTCCGATGTTTATGTATAC+GGG | 0.526279 | 4.1:-61334387 | None:intergenic |
| TGAGAGTAATGTTTGAGTCA+TGG | 0.529431 | 4.1:+61334113 | MS.gene72585:CDS |
| GGAGTGTTGCTTATCAACCT+TGG | 0.535303 | 4.1:+61333166 | MS.gene72585:CDS |
| TCTTCAAGCCACGCATATTG+TGG | 0.536931 | 4.1:-61333986 | None:intergenic |
| TGCCACTATAAGGAATTTGA+AGG | 0.549389 | 4.1:+61332087 | MS.gene72585:CDS |
| ATCTTTCGTAGGCATGTACA+TGG | 0.549448 | 4.1:-61334171 | None:intergenic |
| ACAGCTATCATTACATGGAA+GGG | 0.559696 | 4.1:+61334083 | MS.gene72585:CDS |
| AACAGCTATCATTACATGGA+AGG | 0.564929 | 4.1:+61334082 | MS.gene72585:CDS |
| TGGGTGACAGAGGATGAACC+AGG | 0.567319 | 4.1:+61331956 | MS.gene72585:CDS |
| TACATAAACATCGGAGATGG+AGG | 0.568213 | 4.1:+61334393 | MS.gene72585:CDS |
| AATGCTGAGTACTCTGGCTG+TGG | 0.569296 | 4.1:-61334786 | None:intergenic |
| CTTTATAAGGAGTATGGTAT+CGG | 0.573117 | 4.1:-61333414 | None:intergenic |
| CAACCTTGGATATGGACCGT+TGG | 0.579988 | 4.1:+61333180 | MS.gene72585:CDS |
| CAGCTATCATTACATGGAAG+GGG | 0.582038 | 4.1:+61334084 | MS.gene72585:CDS |
| TTGTTCTCATGCATTCACCT+TGG | 0.582761 | 4.1:+61334050 | MS.gene72585:CDS |
| GTTGATGATTCCAAACCTCA+TGG | 0.582800 | 4.1:+61334945 | MS.gene72585:CDS |
| TTTCCAACGGTCCATATCCA+AGG | 0.588396 | 4.1:-61333183 | None:intergenic |
| ATCAAGTTCATGGTTTCCAA+CGG | 0.588742 | 4.1:-61333196 | None:intergenic |
| CGAATCATGACAATGTTAGG+TGG | 0.590318 | 4.1:+61333118 | MS.gene72585:CDS |
| TAGCAACAGCTATCATTACA+TGG | 0.590375 | 4.1:+61334078 | MS.gene72585:CDS |
| TTAGGTGGGATACTTGGGGA+AGG | 0.593341 | 4.1:+61333133 | MS.gene72585:CDS |
| TAACGAACTGCATCCGACCC+TGG | 0.595223 | 4.1:-61331974 | None:intergenic |
| GAAAGCAGTGATCGTATCGT+GGG | 0.600675 | 4.1:+61331937 | MS.gene72585:CDS |
| GACAGAGGATGAACCAGGGT+CGG | 0.603361 | 4.1:+61331961 | MS.gene72585:CDS |
| GTATACATAAACATCGGAGA+TGG | 0.606702 | 4.1:+61334390 | MS.gene72585:CDS |
| GATCGTATCGTGGGTGACAG+AGG | 0.610705 | 4.1:+61331946 | MS.gene72585:CDS |
| CTTGGGGAAGGTTTGCAGAG+AGG | 0.615319 | 4.1:+61333145 | MS.gene72585:CDS |
| ATAACACAAGGTGATCATGT+GGG | 0.617402 | 4.1:+61331914 | MS.gene72585:CDS |
| TATAACACAAGGTGATCATG+TGG | 0.618384 | 4.1:+61331913 | MS.gene72585:CDS |
| GGAAAGCAGTGATCGTATCG+TGG | 0.618795 | 4.1:+61331936 | MS.gene72585:CDS |
| TAACACAAGGTGATCATGTG+GGG | 0.622210 | 4.1:+61331915 | MS.gene72585:CDS |
| AGTACTTACAGATCTTTCGT+AGG | 0.631526 | 4.1:-61334182 | None:intergenic |
| GAATCATGACAATGTTAGGT+GGG | 0.633810 | 4.1:+61333119 | MS.gene72585:CDS |
| AGCTGGCATAGAAATCAAGA+TGG | 0.638512 | 4.1:+61334870 | MS.gene72585:CDS |
| GGAGATGGAGGGAATATCGA+AGG | 0.640067 | 4.1:+61334405 | MS.gene72585:CDS |
| AATATACACCACAATATGCG+TGG | 0.647948 | 4.1:+61333978 | MS.gene72585:CDS |
| ACATAAACATCGGAGATGGA+GGG | 0.656509 | 4.1:+61334394 | MS.gene72585:CDS |
| TGTTGAGGAGCATTATAACC+AGG | 0.661090 | 4.1:-61331190 | None:intergenic |
| GAGGTTTGGAATCATCAACC+GGG | 0.673172 | 4.1:-61334941 | None:intergenic |
| ATTCTTCAATGGGAACCATG+AGG | 0.678851 | 4.1:-61334960 | None:intergenic |
| TGCATGAGAACAATCAACCA+AGG | 0.682000 | 4.1:-61334040 | None:intergenic |
| TTGGACTTAGGAACACAACA+AGG | 0.685564 | 4.1:+61332222 | MS.gene72585:CDS |
| ACATCAGGACCAATTGCAGG+AGG | 0.687083 | 4.1:-61332263 | None:intergenic |
| ATGAAGGTTCATATAACACA+AGG | 0.696049 | 4.1:+61331902 | MS.gene72585:intron |
| TAGCTGTTGCTATTATACCA+AGG | 0.710700 | 4.1:-61334067 | None:intergenic |
| GCTCCCGTATACATAAACAT+CGG | 0.723543 | 4.1:+61334384 | MS.gene72585:CDS |
| GGGTGACAGAGGATGAACCA+GGG | 0.727268 | 4.1:+61331957 | MS.gene72585:CDS |
| AATGTTAGGTGGGATACTTG+GGG | 0.732363 | 4.1:+61333129 | MS.gene72585:CDS |
| TGAGGAGCATTATAACCAGG+AGG | 0.752719 | 4.1:-61331187 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAATTGTAATAAAAATATA+GGG | + | chr4.1:61331507-61331526 | MS.gene72585:intron | 10.0% |
| !!! | AGTTTTAATGTTTTAATATA+TGG | + | chr4.1:61331870-61331889 | MS.gene72585:intron | 10.0% |
| !!! | TAATTTTCTCAAATTATTAA+CGG | - | chr4.1:61332453-61332472 | None:intergenic | 10.0% |
| !!! | TTATTTAATTTTTAACTTCA+GGG | - | chr4.1:61333832-61333851 | None:intergenic | 10.0% |
| !!! | TTTATTTAATTTTTAACTTC+AGG | - | chr4.1:61333833-61333852 | None:intergenic | 10.0% |
| !!! | TTTTTGAAAAAATAATTACA+AGG | + | chr4.1:61331699-61331718 | MS.gene72585:intron | 10.0% |
| !! | AATGGAAGTAAATATATAAT+AGG | + | chr4.1:61331568-61331587 | MS.gene72585:intron | 15.0% |
| !! | ATTCTTGATATTATAAAGAA+TGG | + | chr4.1:61331550-61331569 | MS.gene72585:intron | 15.0% |
| !! | CAGTGTAATTATATATATAT+CGG | + | chr4.1:61332480-61332499 | MS.gene72585:intron | 15.0% |
| !! | GAGAATTGTAATAAAAATAT+AGG | + | chr4.1:61331506-61331525 | MS.gene72585:intron | 15.0% |
| !!! | ATATAAATATTTCATTTTGC+AGG | + | chr4.1:61332674-61332693 | MS.gene72585:intron | 15.0% |
| !!! | TTAATGTTTTAATATATGGT+TGG | + | chr4.1:61331874-61331893 | MS.gene72585:intron | 15.0% |
| !!! | TTTCAAAATATTTTGTGAAA+AGG | - | chr4.1:61334230-61334249 | None:intergenic | 15.0% |
| !!! | TTTCTGTAATATTTTATTGA+AGG | + | chr4.1:61334627-61334646 | MS.gene72585:intron | 15.0% |
| !! | AAAATCTATTGAAAAACCAA+AGG | - | chr4.1:61334917-61334936 | None:intergenic | 20.0% |
| !! | AAATCTATTGAAAAACCAAA+GGG | - | chr4.1:61334916-61334935 | None:intergenic | 20.0% |
| !! | AAATTATTACAAGGATTTAC+AGG | - | chr4.1:61333804-61333823 | None:intergenic | 20.0% |
| !! | AACATTAAAACTTATAAGCA+AGG | - | chr4.1:61331862-61331881 | None:intergenic | 20.0% |
| !! | AACTTATGATGATATATGTT+TGG | + | chr4.1:61331785-61331804 | MS.gene72585:intron | 20.0% |
| !! | AATATTACAGAAAGAGAAAT+CGG | - | chr4.1:61334620-61334639 | None:intergenic | 20.0% |
| !! | AATGATAGAGACAATTAAAA+AGG | + | chr4.1:61334713-61334732 | MS.gene72585:intron | 20.0% |
| !! | ACCAAATATTATTATGAAGT+TGG | + | chr4.1:61332203-61332222 | MS.gene72585:CDS | 20.0% |
| !! | ATTGCATATAATATCGTAAA+TGG | + | chr4.1:61334333-61334352 | MS.gene72585:CDS | 20.0% |
| !! | TATCAATTGAATTCAACAAA+AGG | + | chr4.1:61333048-61333067 | MS.gene72585:CDS | 20.0% |
| !! | TATTAATCATTACCAACATT+TGG | - | chr4.1:61333341-61333360 | None:intergenic | 20.0% |
| !! | TCCAACTTCATAATAATATT+TGG | - | chr4.1:61332207-61332226 | None:intergenic | 20.0% |
| !!! | AATGTTGGTAATGATTAATA+TGG | + | chr4.1:61333341-61333360 | MS.gene72585:intron | 20.0% |
| !!! | AGTCATTAAGTTTTCATTTA+TGG | - | chr4.1:61334450-61334469 | None:intergenic | 20.0% |
| !!! | ATATAATCTTCATTTTTCTC+AGG | + | chr4.1:61333953-61333972 | MS.gene72585:intron | 20.0% |
| !!! | CAAATTACATCGATTTATAT+CGG | - | chr4.1:61333245-61333264 | None:intergenic | 20.0% |
| !!! | GGATATTTGTTTTTAAATCA+CGG | + | chr4.1:61331258-61331277 | MS.gene72585:intron | 20.0% |
| !!! | TAAAATTATGAGTTGAAAGA+TGG | - | chr4.1:61332899-61332918 | None:intergenic | 20.0% |
| !!! | TTGATATTTTTGCTTCTTTT+TGG | + | chr4.1:61332170-61332189 | MS.gene72585:intron | 20.0% |
| !!! | TTTGGTTTTTCAATAGATTT+TGG | + | chr4.1:61334916-61334935 | MS.gene72585:CDS | 20.0% |
| !!! | TTTTAAGATATCCTTCAATT+GGG | + | chr4.1:61332606-61332625 | MS.gene72585:intron | 20.0% |
| !!! | TTTTTAAGATATCCTTCAAT+TGG | + | chr4.1:61332605-61332624 | MS.gene72585:intron | 20.0% |
| ! | AAAAATTGCAGTTAAAATGC+AGG | + | chr4.1:61331307-61331326 | MS.gene72585:intron | 25.0% |
| ! | AAATATCAAAACTTTGCATC+TGG | - | chr4.1:61332159-61332178 | None:intergenic | 25.0% |
| ! | ATTATTATGAAGTTGGACTT+AGG | + | chr4.1:61332210-61332229 | MS.gene72585:CDS | 25.0% |
| ! | CGATATAAATCGATGTAATT+TGG | + | chr4.1:61333243-61333262 | MS.gene72585:intron | 25.0% |
| ! | TAAAAATTTAACATGCCTTC+AGG | + | chr4.1:61333854-61333873 | MS.gene72585:intron | 25.0% |
| ! | TGCAAATAAAATTGATCCAT+TGG | - | chr4.1:61333605-61333624 | None:intergenic | 25.0% |
| !! | CAATTTTTGACATAAAGAAC+AGG | + | chr4.1:61334832-61334851 | MS.gene72585:CDS | 25.0% |
| !! | CTTTTGATAGAATACCAAAA+GGG | - | chr4.1:61333457-61333476 | None:intergenic | 25.0% |
| !! | TCTTTTGATAGAATACCAAA+AGG | - | chr4.1:61333458-61333477 | None:intergenic | 25.0% |
| !! | TGTTTTACAATAACAGTTTG+TGG | - | chr4.1:61333643-61333662 | None:intergenic | 25.0% |
| !!! | ATCTAATGGTGGATTTTTAT+CGG | + | chr4.1:61333740-61333759 | MS.gene72585:intron | 25.0% |
| !!! | ATTTTTGAGTTGTCGTTTTA+AGG | + | chr4.1:61334492-61334511 | MS.gene72585:intron | 25.0% |
| !!! | CGTTGCAATTTTTTATACTA+CGG | + | chr4.1:61331484-61331503 | MS.gene72585:intron | 25.0% |
| AATACCATATGCTGAATATG+AGG | - | chr4.1:61333506-61333525 | None:intergenic | 30.0% | |
| ACCACAATGATATCTCATAA+AGG | - | chr4.1:61332341-61332360 | None:intergenic | 30.0% | |
| AGAAACAACATACATGACAA+GGG | - | chr4.1:61332133-61332152 | None:intergenic | 30.0% | |
| AGAATGAAAAGTTTCTCAGA+TGG | - | chr4.1:61333275-61333294 | None:intergenic | 30.0% | |
| AGATACTTCAATTACTCATC+TGG | + | chr4.1:61332052-61332071 | MS.gene72585:CDS | 30.0% | |
| AGGGACGTAAAATTATTACA+AGG | - | chr4.1:61333813-61333832 | None:intergenic | 30.0% | |
| ATCTCCGATGTTTATGTATA+CGG | - | chr4.1:61334391-61334410 | None:intergenic | 30.0% | |
| ATGAACATGATTTGAATTGC+AGG | + | chr4.1:61334754-61334773 | MS.gene72585:intron | 30.0% | |
| ATGAAGGTTCATATAACACA+AGG | + | chr4.1:61331902-61331921 | MS.gene72585:intron | 30.0% | |
| CTTTCAGTTCTCTTACAAAT+TGG | + | chr4.1:61332570-61332589 | MS.gene72585:intron | 30.0% | |
| GAATAGAAAAATACCTGTTG+AGG | - | chr4.1:61331208-61331227 | None:intergenic | 30.0% | |
| GTACTTTGTGATGCTTTATA+AGG | - | chr4.1:61333430-61333449 | None:intergenic | 30.0% | |
| GTGTTATATGAACCTTCATT+AGG | - | chr4.1:61331901-61331920 | None:intergenic | 30.0% | |
| TACAAGGTCAAATTCTTACA+AGG | + | chr4.1:61333878-61333897 | MS.gene72585:intron | 30.0% | |
| TACCTTCAAATTCCTTATAG+TGG | - | chr4.1:61332092-61332111 | None:intergenic | 30.0% | |
| TAGAAATTAGTACTGTGACA+TGG | - | chr4.1:61333703-61333722 | None:intergenic | 30.0% | |
| TTAAAAACATCGCTATCAAC+TGG | - | chr4.1:61331163-61331182 | None:intergenic | 30.0% | |
| TTAACAGGAAAAAAACTCCT+TGG | + | chr4.1:61334023-61334042 | MS.gene72585:CDS | 30.0% | |
| TTATTCATCATGCCACTATA+AGG | + | chr4.1:61332077-61332096 | MS.gene72585:CDS | 30.0% | |
| TTGCGAATAAAATACACTTG+TGG | + | chr4.1:61331382-61331401 | MS.gene72585:intron | 30.0% | |
| TTTCATTTATGGAGCTTACT+CGG | - | chr4.1:61334439-61334458 | None:intergenic | 30.0% | |
| ! | CTTTATAAGGAGTATGGTAT+CGG | - | chr4.1:61333417-61333436 | None:intergenic | 30.0% |
| ! | TGCAATTTTGAATTGATCCA+TGG | + | chr4.1:61331229-61331248 | MS.gene72585:intron | 30.0% |
| !! | TATATATATCGGTGTCGTAT+CGG | + | chr4.1:61332491-61332510 | MS.gene72585:intron | 30.0% |
| !!! | AGTTGATAGCGATGTTTTTA+AGG | + | chr4.1:61331162-61331181 | MS.gene72585:CDS | 30.0% |
| !!! | GTTTTTTTCCTGTTAACTCT+CGG | - | chr4.1:61334019-61334038 | None:intergenic | 30.0% |
| !!! | TTTCAATAGATTTTGGAACC+CGG | + | chr4.1:61334923-61334942 | MS.gene72585:CDS | 30.0% |
| AAAAATTGCATGTCCAAAGC+TGG | - | chr4.1:61334820-61334839 | None:intergenic | 35.0% | |
| AACAAATATCCCTTCTTCCA+TGG | - | chr4.1:61331249-61331268 | None:intergenic | 35.0% | |
| AACAGCTATCATTACATGGA+AGG | + | chr4.1:61334082-61334101 | MS.gene72585:CDS | 35.0% | |
| AAGCGATATATGTTTGTGTC+AGG | + | chr4.1:61334296-61334315 | MS.gene72585:intron | 35.0% | |
| AATATACACCACAATATGCG+TGG | + | chr4.1:61333978-61333997 | MS.gene72585:CDS | 35.0% | |
| AATTTGACCTTGTAACCTGA+AGG | - | chr4.1:61333872-61333891 | None:intergenic | 35.0% | |
| ACAAACCATAACCAATCATC+AGG | + | chr4.1:61332763-61332782 | MS.gene72585:intron | 35.0% | |
| ACAGCTATCATTACATGGAA+GGG | + | chr4.1:61334083-61334102 | MS.gene72585:CDS | 35.0% | |
| ACCATACATACATGCATATG+TGG | + | chr4.1:61333551-61333570 | MS.gene72585:intron | 35.0% | |
| ACCTAACATTGTCATGATTC+GGG | - | chr4.1:61333119-61333138 | None:intergenic | 35.0% | |
| AGGTAAAGTGTGATCTTTCA+TGG | + | chr4.1:61332307-61332326 | MS.gene72585:intron | 35.0% | |
| AGTACTTACAGATCTTTCGT+AGG | - | chr4.1:61334185-61334204 | None:intergenic | 35.0% | |
| ATAACACAAGGTGATCATGT+GGG | + | chr4.1:61331914-61331933 | MS.gene72585:CDS | 35.0% | |
| ATCAAGTTCATGGTTTCCAA+CGG | - | chr4.1:61333199-61333218 | None:intergenic | 35.0% | |
| ATTACAGAAAGAGAAATCGG+TGG | - | chr4.1:61334617-61334636 | None:intergenic | 35.0% | |
| CACCTAACATTGTCATGATT+CGG | - | chr4.1:61333120-61333139 | None:intergenic | 35.0% | |
| CCATATACATTTGGTCTCAT+AGG | + | chr4.1:61332287-61332306 | MS.gene72585:CDS | 35.0% | |
| CCTATGAGACCAAATGTATA+TGG | - | chr4.1:61332290-61332309 | None:intergenic | 35.0% | |
| CTTGTTACACAAGAGGATTA+GGG | + | chr4.1:61331615-61331634 | MS.gene72585:intron | 35.0% | |
| GAATCATGACAATGTTAGGT+GGG | + | chr4.1:61333119-61333138 | MS.gene72585:CDS | 35.0% | |
| GACAGTGAGTTAATGAATAG+AGG | - | chr4.1:61333915-61333934 | None:intergenic | 35.0% | |
| GAGAAACAACATACATGACA+AGG | - | chr4.1:61332134-61332153 | None:intergenic | 35.0% | |
| GATGATATATGTTTGGTCTC+TGG | + | chr4.1:61331792-61331811 | MS.gene72585:intron | 35.0% | |
| GCCTTTATGAGATATCATTG+TGG | + | chr4.1:61332337-61332356 | MS.gene72585:intron | 35.0% | |
| GTATACATAAACATCGGAGA+TGG | + | chr4.1:61334390-61334409 | MS.gene72585:CDS | 35.0% | |
| GTCAGACTTATGATTCAAAC+AGG | + | chr4.1:61333013-61333032 | MS.gene72585:CDS | 35.0% | |
| GTGATGCTTTATAAGGAGTA+TGG | - | chr4.1:61333423-61333442 | None:intergenic | 35.0% | |
| TAAGATATCCTTCAATTGGG+TGG | + | chr4.1:61332609-61332628 | MS.gene72585:intron | 35.0% | |
| TAGCAACAGCTATCATTACA+TGG | + | chr4.1:61334078-61334097 | MS.gene72585:CDS | 35.0% | |
| TATAACACAAGGTGATCATG+TGG | + | chr4.1:61331913-61331932 | MS.gene72585:CDS | 35.0% | |
| TATCGGAAGCTTACAATTTC+TGG | - | chr4.1:61333228-61333247 | None:intergenic | 35.0% | |
| TCACATGAATCAGTACTCTT+TGG | - | chr4.1:61334275-61334294 | None:intergenic | 35.0% | |
| TCATTACCAACATTTGGACT+TGG | - | chr4.1:61333335-61333354 | None:intergenic | 35.0% | |
| TCCACATATGCATGTATGTA+TGG | - | chr4.1:61333555-61333574 | None:intergenic | 35.0% | |
| TCTCATATGCCAACATACAT+AGG | - | chr4.1:61332644-61332663 | None:intergenic | 35.0% | |
| TCTCCGATGTTTATGTATAC+GGG | - | chr4.1:61334390-61334409 | None:intergenic | 35.0% | |
| TCTTGTTACACAAGAGGATT+AGG | + | chr4.1:61331614-61331633 | MS.gene72585:intron | 35.0% | |
| TGAATTGATCCATGGAAGAA+GGG | + | chr4.1:61331237-61331256 | MS.gene72585:intron | 35.0% | |
| TGAGAGTAATGTTTGAGTCA+TGG | + | chr4.1:61334113-61334132 | MS.gene72585:CDS | 35.0% | |
| TGCCACTATAAGGAATTTGA+AGG | + | chr4.1:61332087-61332106 | MS.gene72585:CDS | 35.0% | |
| TTGAATTGATCCATGGAAGA+AGG | + | chr4.1:61331236-61331255 | MS.gene72585:intron | 35.0% | |
| TTGCGATGAAAATACAGTTG+TGG | + | chr4.1:61331446-61331465 | MS.gene72585:intron | 35.0% | |
| TTGCTTATCAACCTTGGATA+TGG | + | chr4.1:61333172-61333191 | MS.gene72585:CDS | 35.0% | |
| ! | AATAAAAAAGGTGTGCGACT+AGG | - | chr4.1:61331681-61331700 | None:intergenic | 35.0% |
| ! | ATGGATTGATGATTGTTTGC+AGG | + | chr4.1:61333360-61333379 | MS.gene72585:intron | 35.0% |
| ! | CATTTTCCAAGTCCAAATGT+TGG | + | chr4.1:61333326-61333345 | MS.gene72585:intron | 35.0% |
| ! | GCTGATTCTATGATTTCCAA+TGG | + | chr4.1:61333586-61333605 | MS.gene72585:intron | 35.0% |
| ! | TAGCTGTTGCTATTATACCA+AGG | - | chr4.1:61334070-61334089 | None:intergenic | 35.0% |
| ! | TATATGGTTGGTCCTAATGA+AGG | + | chr4.1:61331886-61331905 | MS.gene72585:intron | 35.0% |
| ! | TGGATTGATGATTGTTTGCA+GGG | + | chr4.1:61333361-61333380 | MS.gene72585:intron | 35.0% |
| !! | AAAGTTGATGTTGTGTTTGC+TGG | + | chr4.1:61334148-61334167 | MS.gene72585:CDS | 35.0% |
| !! | TTCTAAAGTCACCTGATGAT+TGG | - | chr4.1:61332777-61332796 | None:intergenic | 35.0% |
| AAGCACAAGAAGCTAGCTAA+AGG | + | chr4.1:61332013-61332032 | MS.gene72585:CDS | 40.0% | |
| AAGGATGCTACATCAGTTTG+TGG | - | chr4.1:61332979-61332998 | None:intergenic | 40.0% | |
| AATGTTAGGTGGGATACTTG+GGG | + | chr4.1:61333129-61333148 | MS.gene72585:CDS | 40.0% | |
| ACAATGTTAGGTGGGATACT+TGG | + | chr4.1:61333127-61333146 | MS.gene72585:CDS | 40.0% | |
| ACATAAACATCGGAGATGGA+GGG | + | chr4.1:61334394-61334413 | MS.gene72585:CDS | 40.0% | |
| ACCCGAATCATGACAATGTT+AGG | + | chr4.1:61333115-61333134 | MS.gene72585:CDS | 40.0% | |
| AGAGGATTAGGGTTAAAGTG+CGG | + | chr4.1:61331626-61331645 | MS.gene72585:intron | 40.0% | |
| AGCACAAGAAGCTAGCTAAA+GGG | + | chr4.1:61332014-61332033 | MS.gene72585:CDS | 40.0% | |
| AGCCTTGCACTAACATCTAA+TGG | + | chr4.1:61333726-61333745 | MS.gene72585:intron | 40.0% | |
| AGCTGGCATAGAAATCAAGA+TGG | + | chr4.1:61334870-61334889 | MS.gene72585:CDS | 40.0% | |
| AGTACTGTGACATGGAAACA+TGG | - | chr4.1:61333695-61333714 | None:intergenic | 40.0% | |
| ATATCCTTCAATTGGGTGGA+TGG | + | chr4.1:61332613-61332632 | MS.gene72585:intron | 40.0% | |
| ATCTTTCGTAGGCATGTACA+TGG | - | chr4.1:61334174-61334193 | None:intergenic | 40.0% | |
| ATGAAGCACGGATATGGAAA+AGG | + | chr4.1:61332389-61332408 | MS.gene72585:intron | 40.0% | |
| ATGGAGTCTCCTATGTATGT+TGG | + | chr4.1:61332632-61332651 | MS.gene72585:intron | 40.0% | |
| CAATGTTAGGTGGGATACTT+GGG | + | chr4.1:61333128-61333147 | MS.gene72585:CDS | 40.0% | |
| CACCATTAGATGTTAGTGCA+AGG | - | chr4.1:61333731-61333750 | None:intergenic | 40.0% | |
| CAGCTATCATTACATGGAAG+GGG | + | chr4.1:61334084-61334103 | MS.gene72585:CDS | 40.0% | |
| CATACATGACAAGGGAGTAA+TGG | - | chr4.1:61332125-61332144 | None:intergenic | 40.0% | |
| CATATACACAGTCAGCGTAA+AGG | - | chr4.1:61332868-61332887 | None:intergenic | 40.0% | |
| CATTCCTACATGCATTGTTG+TGG | + | chr4.1:61331819-61331838 | MS.gene72585:intron | 40.0% | |
| CCAAATGTATATGGCACATC+AGG | - | chr4.1:61332281-61332300 | None:intergenic | 40.0% | |
| CCTGATGTGCCATATACATT+TGG | + | chr4.1:61332278-61332297 | MS.gene72585:CDS | 40.0% | |
| CGAAAAAGGCTTGAATGGTT+CGG | - | chr4.1:61333392-61333411 | None:intergenic | 40.0% | |
| CGAATCATGACAATGTTAGG+TGG | + | chr4.1:61333118-61333137 | MS.gene72585:CDS | 40.0% | |
| CTGGAGCAAAATCAAGTTCA+TGG | - | chr4.1:61333209-61333228 | None:intergenic | 40.0% | |
| CTGTTAAGAGTGATTCCCTT+TGG | + | chr4.1:61334898-61334917 | MS.gene72585:CDS | 40.0% | |
| CTTGCACTAACATCTAATGG+TGG | + | chr4.1:61333729-61333748 | MS.gene72585:intron | 40.0% | |
| GATTAGACGTGTCCTATTGT+CGG | - | chr4.1:61332536-61332555 | None:intergenic | 40.0% | |
| GATTCCACAACAATGCATGT+AGG | - | chr4.1:61331826-61331845 | None:intergenic | 40.0% | |
| GCTCCCGTATACATAAACAT+CGG | + | chr4.1:61334384-61334403 | MS.gene72585:CDS | 40.0% | |
| GGACAAACAGTTCTGTTTGT+TGG | + | chr4.1:61333069-61333088 | MS.gene72585:CDS | 40.0% | |
| TAACACAAGGTGATCATGTG+GGG | + | chr4.1:61331915-61331934 | MS.gene72585:CDS | 40.0% | |
| TACATAAACATCGGAGATGG+AGG | + | chr4.1:61334393-61334412 | MS.gene72585:CDS | 40.0% | |
| TCTCTAAATGCTGAGTACTC+TGG | - | chr4.1:61334795-61334814 | None:intergenic | 40.0% | |
| TGATCAGTTCCTATGAAGCA+CGG | + | chr4.1:61332377-61332396 | MS.gene72585:intron | 40.0% | |
| TGCATGAGAACAATCAACCA+AGG | - | chr4.1:61334043-61334062 | None:intergenic | 40.0% | |
| TGCGAATCTTGTTACACAAG+AGG | + | chr4.1:61331608-61331627 | MS.gene72585:intron | 40.0% | |
| TGGTTATAATGCTCCTCAAC+AGG | + | chr4.1:61331192-61331211 | MS.gene72585:CDS | 40.0% | |
| TTCAGCACACATCATTGTCT+TGG | + | chr4.1:61333480-61333499 | MS.gene72585:CDS | 40.0% | |
| TTGGACTTAGGAACACAACA+AGG | + | chr4.1:61332222-61332241 | MS.gene72585:CDS | 40.0% | |
| TTGGCCTCATATTCAGCATA+TGG | + | chr4.1:61333499-61333518 | MS.gene72585:CDS | 40.0% | |
| TTGTTCTCATGCATTCACCT+TGG | + | chr4.1:61334050-61334069 | MS.gene72585:CDS | 40.0% | |
| TTTACAACTCCTCCTGCAAT+TGG | + | chr4.1:61332254-61332273 | MS.gene72585:CDS | 40.0% | |
| TTTCCATATCCGTGCTTCAT+AGG | - | chr4.1:61332389-61332408 | None:intergenic | 40.0% | |
| ! | ACTGATGTAGCATCCTTTTC+AGG | + | chr4.1:61332982-61333001 | MS.gene72585:intron | 40.0% |
| ! | AGTCACCTGATGATTGGTTA+TGG | - | chr4.1:61332771-61332790 | None:intergenic | 40.0% |
| ! | GGAACACAACAAGGCAATTT+TGG | + | chr4.1:61332231-61332250 | MS.gene72585:CDS | 40.0% |
| ! | GGAGCTGATAGATCTTTTAC+GGG | - | chr4.1:61334369-61334388 | None:intergenic | 40.0% |
| ! | GGGAGCTGATAGATCTTTTA+CGG | - | chr4.1:61334370-61334389 | None:intergenic | 40.0% |
| ! | TAACATGCCTTCAGGTTACA+AGG | + | chr4.1:61333862-61333881 | MS.gene72585:intron | 40.0% |
| ! | TGAGGTTTGGAATCATCAAC+CGG | - | chr4.1:61334945-61334964 | None:intergenic | 40.0% |
| ! | TTAAAGTGCGGTGTCAATCA+TGG | + | chr4.1:61331638-61331657 | MS.gene72585:intron | 40.0% |
| !! | CACAAAGTACTTCACCCTTT+TGG | + | chr4.1:61333440-61333459 | MS.gene72585:CDS | 40.0% |
| !! | GTTGATGATTCCAAACCTCA+TGG | + | chr4.1:61334945-61334964 | MS.gene72585:CDS | 40.0% |
| !! | TGTTGAGGAGCATTATAACC+AGG | - | chr4.1:61331193-61331212 | None:intergenic | 40.0% |
| !!! | GATGTTTTTAAGGTTCCTCC+TGG | + | chr4.1:61331172-61331191 | MS.gene72585:CDS | 40.0% |
| AAGAGCTACCGAGAGTTAAC+AGG | + | chr4.1:61334008-61334027 | MS.gene72585:CDS | 45.0% | |
| AATAGGACACGTCTAATCCG+AGG | + | chr4.1:61332538-61332557 | MS.gene72585:intron | 45.0% | |
| ATCATGGTCACCCGATGTTT+CGG | + | chr4.1:61331654-61331673 | MS.gene72585:intron | 45.0% | |
| CTGACCAAGATCACCTGAAA+AGG | - | chr4.1:61332998-61333017 | None:intergenic | 45.0% | |
| GAAAGCAGTGATCGTATCGT+GGG | + | chr4.1:61331937-61331956 | MS.gene72585:CDS | 45.0% | |
| GCATTTAGAGAAGCCAGCTT+TGG | + | chr4.1:61334804-61334823 | MS.gene72585:CDS | 45.0% | |
| GGACACATGCTTACTATAGC+TGG | + | chr4.1:61334853-61334872 | MS.gene72585:CDS | 45.0% | |
| GTTCCTATGAAGCACGGATA+TGG | + | chr4.1:61332383-61332402 | MS.gene72585:intron | 45.0% | |
| TCAATGGGAACCATGAGGTT+TGG | - | chr4.1:61334958-61334977 | None:intergenic | 45.0% | |
| TCTTCAAGCCACGCATATTG+TGG | - | chr4.1:61333989-61334008 | None:intergenic | 45.0% | |
| TTTCCAACGGTCCATATCCA+AGG | - | chr4.1:61333186-61333205 | None:intergenic | 45.0% | |
| ! | GAGGTTTGGAATCATCAACC+GGG | - | chr4.1:61334944-61334963 | None:intergenic | 45.0% |
| !! | GGAGTGTTGCTTATCAACCT+TGG | + | chr4.1:61333166-61333185 | MS.gene72585:CDS | 45.0% |
| !! | GTATGGTATCGGTGCGAAAA+AGG | - | chr4.1:61333406-61333425 | None:intergenic | 45.0% |
| !! | TGAGGAGCATTATAACCAGG+AGG | - | chr4.1:61331190-61331209 | None:intergenic | 45.0% |
| !!! | GCATCCTTTTCAGGTGATCT+TGG | + | chr4.1:61332991-61333010 | MS.gene72585:intron | 45.0% |
| !! | AAATGAAATATTTATATTAT+TGG | - | chr4.1:61332671-61332690 | None:intergenic | 5.0% |
| !!! | TATTTTTTCAAAAATAAAAA+AGG | - | chr4.1:61331693-61331712 | None:intergenic | 5.0% |
| AATGCTGAGTACTCTGGCTG+TGG | - | chr4.1:61334789-61334808 | None:intergenic | 50.0% | |
| ACATCAGGACCAATTGCAGG+AGG | - | chr4.1:61332266-61332285 | None:intergenic | 50.0% | |
| CAACCTTGGATATGGACCGT+TGG | + | chr4.1:61333180-61333199 | MS.gene72585:CDS | 50.0% | |
| CGGTGCGAAAAAGGCTTGAA+TGG | - | chr4.1:61333397-61333416 | None:intergenic | 50.0% | |
| GACTCCATCCACCCAATTGA+AGG | - | chr4.1:61332620-61332639 | None:intergenic | 50.0% | |
| GGAAAGCAGTGATCGTATCG+TGG | + | chr4.1:61331936-61331955 | MS.gene72585:CDS | 50.0% | |
| GGAGATGGAGGGAATATCGA+AGG | + | chr4.1:61334405-61334424 | MS.gene72585:CDS | 50.0% | |
| TGCGACTAGGACCGAAACAT+CGG | - | chr4.1:61331668-61331687 | None:intergenic | 50.0% | |
| TTAGGTGGGATACTTGGGGA+AGG | + | chr4.1:61333133-61333152 | MS.gene72585:CDS | 50.0% | |
| ! | ACTGAAAGCACGACACTCCT+CGG | - | chr4.1:61332558-61332577 | None:intergenic | 50.0% |
| !! | TATCGGTGTCGTATCGGTGT+CGG | + | chr4.1:61332497-61332516 | MS.gene72585:intron | 50.0% |
| CACGACACGTGTCCGACAAT+AGG | + | chr4.1:61332521-61332540 | MS.gene72585:intron | 55.0% | |
| CTTGGGGAAGGTTTGCAGAG+AGG | + | chr4.1:61333145-61333164 | MS.gene72585:CDS | 55.0% | |
| GACAGAGGATGAACCAGGGT+CGG | + | chr4.1:61331961-61331980 | MS.gene72585:CDS | 55.0% | |
| GATCGTATCGTGGGTGACAG+AGG | + | chr4.1:61331946-61331965 | MS.gene72585:CDS | 55.0% | |
| GCGACTAGGACCGAAACATC+GGG | - | chr4.1:61331667-61331686 | None:intergenic | 55.0% | |
| GGCACATCAGGACCAATTGC+AGG | - | chr4.1:61332269-61332288 | None:intergenic | 55.0% | |
| GGGTGACAGAGGATGAACCA+GGG | + | chr4.1:61331957-61331976 | MS.gene72585:CDS | 55.0% | |
| GGTCGGATGCAGTTCGTTAC+TGG | + | chr4.1:61331978-61331997 | MS.gene72585:CDS | 55.0% | |
| TAACGAACTGCATCCGACCC+TGG | - | chr4.1:61331977-61331996 | None:intergenic | 55.0% | |
| TGGGTGACAGAGGATGAACC+AGG | + | chr4.1:61331956-61331975 | MS.gene72585:CDS | 55.0% | |
| !! | ATCGGTGTCGTATCGGTGTC+GGG | + | chr4.1:61332498-61332517 | MS.gene72585:intron | 55.0% |
| AGTGTCCGTGTCGTCGTGTC+TGG | - | chr4.1:61332418-61332437 | None:intergenic | 60.0% | |
| GGACACCAGACACGACGACA+CGG | + | chr4.1:61332410-61332429 | MS.gene72585:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 61331157 | 61334977 | 61331157 | ID=MS.gene72585 |
| chr4.1 | mRNA | 61331157 | 61334977 | 61331157 | ID=MS.gene72585.t1;Parent=MS.gene72585 |
| chr4.1 | exon | 61331157 | 61331213 | 61331157 | ID=MS.gene72585.t1.exon1;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61331157 | 61331213 | 61331157 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61331908 | 61332108 | 61331908 | ID=MS.gene72585.t1.exon2;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61331908 | 61332108 | 61331908 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61332197 | 61332308 | 61332197 | ID=MS.gene72585.t1.exon3;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61332197 | 61332308 | 61332197 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61333004 | 61333233 | 61333004 | ID=MS.gene72585.t1.exon4;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61333004 | 61333233 | 61333004 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61333382 | 61333520 | 61333382 | ID=MS.gene72585.t1.exon5;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61333382 | 61333520 | 61333382 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61333975 | 61334195 | 61333975 | ID=MS.gene72585.t1.exon6;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61333975 | 61334195 | 61333975 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61334318 | 61334439 | 61334318 | ID=MS.gene72585.t1.exon7;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61334318 | 61334439 | 61334318 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| chr4.1 | exon | 61334776 | 61334977 | 61334776 | ID=MS.gene72585.t1.exon8;Parent=MS.gene72585.t1 |
| chr4.1 | CDS | 61334776 | 61334977 | 61334776 | ID=cds.MS.gene72585.t1;Parent=MS.gene72585.t1 |
| Gene Sequence |
| Protein sequence |
