Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58017.t1 | AFK47719.1 | 98 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 5.10E-266 | 926.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58017.t1 | Q949Y3 | 78.0 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 2.1e-220 | 766.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58017.t1 | I3T5C7 | 98.0 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 3.7e-266 | 926.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029291 | MS.gene58017 | PPI |
| MS.gene58017 | MS.gene83723 | PPI |
| MS.gene037272 | MS.gene58017 | PPI |
| MS.gene58017 | MS.gene54917 | PPI |
| MS.gene74939 | MS.gene58017 | PPI |
| MS.gene83724 | MS.gene58017 | PPI |
| MS.gene58017 | MS.gene72586 | PPI |
| MS.gene72585 | MS.gene58017 | PPI |
| MS.gene065024 | MS.gene58017 | PPI |
| MS.gene54918 | MS.gene58017 | PPI |
| MS.gene58017 | MS.gene91457 | PPI |
| MS.gene91456 | MS.gene58017 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58017.t1 | MTR_4g115670 | 98.004 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 0.0 | 918 |
| MS.gene58017.t1 | MTR_0188s0020 | 61.682 | 428 | 161 | 2 | 26 | 451 | 32 | 458 | 0.0 | 556 |
| MS.gene58017.t1 | MTR_4g037105 | 60.789 | 431 | 166 | 2 | 23 | 451 | 23 | 452 | 0.0 | 553 |
| MS.gene58017.t1 | MTR_1g112630 | 60.648 | 432 | 166 | 3 | 23 | 451 | 24 | 454 | 0.0 | 546 |
| MS.gene58017.t1 | MTR_3g051240 | 43.367 | 392 | 195 | 7 | 55 | 445 | 43 | 408 | 2.51e-101 | 309 |
| MS.gene58017.t1 | MTR_5g092360 | 41.872 | 406 | 209 | 7 | 41 | 445 | 35 | 414 | 1.42e-99 | 305 |
| MS.gene58017.t1 | MTR_7g104360 | 41.832 | 404 | 206 | 9 | 48 | 447 | 38 | 416 | 2.95e-98 | 301 |
| MS.gene58017.t1 | MTR_1g060360 | 43.257 | 393 | 198 | 8 | 55 | 446 | 46 | 414 | 1.68e-96 | 297 |
| MS.gene58017.t1 | MTR_7g104330 | 41.919 | 396 | 202 | 8 | 50 | 443 | 49 | 418 | 5.82e-96 | 296 |
| MS.gene58017.t1 | MTR_6g013050 | 34.864 | 479 | 223 | 11 | 36 | 439 | 52 | 516 | 7.59e-77 | 251 |
| MS.gene58017.t1 | MTR_3g083810 | 34.350 | 492 | 231 | 12 | 36 | 450 | 52 | 528 | 1.02e-72 | 239 |
| MS.gene58017.t1 | MTR_6g013050 | 34.490 | 461 | 213 | 11 | 36 | 421 | 52 | 498 | 4.91e-71 | 234 |
| MS.gene58017.t1 | MTR_7g056403 | 32.653 | 490 | 238 | 11 | 38 | 450 | 53 | 527 | 4.11e-69 | 229 |
| MS.gene58017.t1 | MTR_3g083820 | 33.943 | 492 | 233 | 12 | 36 | 450 | 52 | 528 | 4.63e-69 | 229 |
| MS.gene58017.t1 | MTR_4g037670 | 28.998 | 469 | 242 | 22 | 14 | 435 | 189 | 613 | 1.20e-33 | 134 |
| MS.gene58017.t1 | MTR_1g052505 | 28.235 | 425 | 228 | 18 | 14 | 390 | 167 | 562 | 1.18e-32 | 130 |
| MS.gene58017.t1 | MTR_3g074930 | 26.696 | 457 | 267 | 18 | 42 | 451 | 170 | 605 | 2.88e-26 | 112 |
| MS.gene58017.t1 | MTR_3g074930 | 26.551 | 403 | 250 | 13 | 81 | 451 | 224 | 612 | 4.17e-26 | 111 |
| MS.gene58017.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 67 | 532 | 3.32e-24 | 105 |
| MS.gene58017.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 144 | 609 | 4.91e-24 | 105 |
| MS.gene58017.t1 | MTR_8g063080 | 25.785 | 446 | 266 | 19 | 53 | 451 | 167 | 594 | 5.54e-24 | 105 |
| MS.gene58017.t1 | MTR_4g082930 | 24.276 | 449 | 258 | 18 | 54 | 438 | 143 | 573 | 2.95e-22 | 100 |
| MS.gene58017.t1 | MTR_5g045600 | 26.685 | 371 | 226 | 13 | 113 | 451 | 245 | 601 | 9.88e-22 | 98.6 |
| MS.gene58017.t1 | MTR_3g074970 | 25.282 | 443 | 246 | 15 | 42 | 451 | 119 | 509 | 2.04e-21 | 97.1 |
| MS.gene58017.t1 | MTR_4g082940 | 22.864 | 433 | 268 | 18 | 55 | 438 | 144 | 559 | 5.30e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58017.t1 | AT5G34850 | 78.049 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 0.0 | 754 |
| MS.gene58017.t1 | AT2G27190 | 59.603 | 453 | 177 | 3 | 1 | 451 | 9 | 457 | 0.0 | 550 |
| MS.gene58017.t1 | AT2G16430 | 57.399 | 446 | 187 | 2 | 8 | 451 | 12 | 456 | 0.0 | 532 |
| MS.gene58017.t1 | AT4G36350 | 55.677 | 458 | 188 | 7 | 1 | 451 | 3 | 452 | 1.77e-177 | 505 |
| MS.gene58017.t1 | AT1G56360 | 55.044 | 456 | 192 | 7 | 5 | 451 | 1 | 452 | 2.45e-177 | 504 |
| MS.gene58017.t1 | AT2G18130 | 51.542 | 454 | 190 | 7 | 5 | 451 | 3 | 433 | 7.70e-151 | 436 |
| MS.gene58017.t1 | AT2G16430 | 61.027 | 331 | 126 | 2 | 123 | 451 | 7 | 336 | 1.80e-148 | 427 |
| MS.gene58017.t1 | AT3G46120 | 44.760 | 458 | 162 | 13 | 5 | 451 | 3 | 380 | 4.21e-114 | 340 |
| MS.gene58017.t1 | AT3G20500 | 42.643 | 401 | 203 | 7 | 50 | 449 | 42 | 416 | 2.53e-102 | 312 |
| MS.gene58017.t1 | AT3G52820 | 41.985 | 393 | 204 | 7 | 55 | 447 | 47 | 415 | 5.15e-96 | 296 |
| MS.gene58017.t1 | AT3G52810 | 40.136 | 441 | 226 | 12 | 1 | 436 | 1 | 408 | 1.46e-94 | 292 |
| MS.gene58017.t1 | AT3G52780 | 42.172 | 396 | 203 | 8 | 55 | 447 | 44 | 416 | 3.87e-93 | 288 |
| MS.gene58017.t1 | AT1G52940 | 54.202 | 238 | 103 | 5 | 46 | 279 | 6 | 241 | 1.98e-81 | 251 |
| MS.gene58017.t1 | AT4G13700 | 34.889 | 407 | 210 | 11 | 36 | 401 | 45 | 437 | 7.10e-69 | 226 |
| MS.gene58017.t1 | AT3G07130 | 33.778 | 450 | 216 | 9 | 67 | 450 | 85 | 518 | 8.02e-69 | 228 |
| MS.gene58017.t1 | AT2G32770 | 31.263 | 499 | 239 | 13 | 38 | 448 | 51 | 533 | 1.03e-64 | 218 |
| MS.gene58017.t1 | AT3G52780 | 40.656 | 305 | 166 | 7 | 55 | 356 | 44 | 336 | 5.09e-63 | 208 |
| MS.gene58017.t1 | AT3G07130 | 31.356 | 472 | 231 | 9 | 67 | 450 | 85 | 551 | 1.13e-62 | 213 |
| MS.gene58017.t1 | AT4G13700 | 33.148 | 359 | 196 | 9 | 36 | 353 | 45 | 400 | 1.31e-56 | 193 |
| MS.gene58017.t1 | AT2G32770 | 32.454 | 379 | 179 | 7 | 107 | 421 | 62 | 427 | 2.32e-54 | 187 |
| MS.gene58017.t1 | AT2G32770 | 28.858 | 499 | 222 | 14 | 38 | 448 | 51 | 504 | 1.78e-51 | 182 |
| MS.gene58017.t1 | AT1G13750 | 26.455 | 378 | 232 | 13 | 106 | 451 | 232 | 595 | 1.21e-23 | 104 |
| MS.gene58017.t1 | AT5G50400 | 25.000 | 488 | 304 | 17 | 5 | 451 | 55 | 521 | 2.15e-23 | 103 |
| MS.gene58017.t1 | AT5G50400 | 26.596 | 376 | 234 | 13 | 106 | 451 | 230 | 593 | 2.20e-23 | 103 |
| MS.gene58017.t1 | AT4G24890 | 25.543 | 368 | 234 | 13 | 113 | 451 | 241 | 597 | 1.10e-20 | 95.5 |
| MS.gene58017.t1 | AT1G13900 | 26.804 | 388 | 212 | 18 | 103 | 438 | 203 | 570 | 1.31e-20 | 95.1 |
| MS.gene58017.t1 | AT2G03450 | 25.166 | 453 | 249 | 21 | 53 | 438 | 141 | 570 | 1.14e-18 | 89.4 |
Find 119 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATATACCACTCCTTATT+TGG | 0.124320 | 8.3:+10779345 | MS.gene58017:CDS |
| CCAGATGCCACCTACAAATT+TGG | 0.149906 | 8.3:+10778397 | MS.gene58017:CDS |
| CAGTAATGAAGCTCACTTTA+TGG | 0.198207 | 8.3:+10780409 | MS.gene58017:CDS |
| CGGTTTCAAATTACACTTTC+GGG | 0.223069 | 8.3:+10778040 | MS.gene58017:CDS |
| GTGATTCTTCTCGAGAATTT+TGG | 0.264384 | 8.3:+10778350 | MS.gene58017:CDS |
| TGACTGGACCCTGGTTCATC+TGG | 0.265537 | 8.3:-10777967 | None:intergenic |
| TGTTATGTTGTAATCTATAT+TGG | 0.270249 | 8.3:-10780691 | None:intergenic |
| GCTCAAACTGTTCTATTTGT+TGG | 0.306088 | 8.3:+10778656 | MS.gene58017:CDS |
| TTATTGGTCGTGAAGGTTTA+GGG | 0.329889 | 8.3:+10780886 | MS.gene58017:intron |
| TCACGAAATGCAGAGTATTC+TGG | 0.330065 | 8.3:-10780917 | None:intergenic |
| ACTAAATACTACTACAGAAT+TGG | 0.331165 | 8.3:+10778322 | MS.gene58017:CDS |
| GTACTCTTGGACGCCAAATA+AGG | 0.334148 | 8.3:-10779358 | None:intergenic |
| ACCTACAAATTTGGGATCAT+TGG | 0.339885 | 8.3:+10778406 | MS.gene58017:CDS |
| ATGAGCTGCCACAGGTTGAT+AGG | 0.342674 | 8.3:+10780339 | MS.gene58017:CDS |
| GTGGCATCTGGTCCAACTTT+AGG | 0.343540 | 8.3:-10778385 | None:intergenic |
| TATCTACATTTCAGGTGATC+TGG | 0.362894 | 8.3:+10778583 | MS.gene58017:intron |
| ATCAAGAAGGTCTTGCTTCT+AGG | 0.366011 | 8.3:+10780781 | MS.gene58017:CDS |
| CAGCGTATCAGCCATGGATA+TGG | 0.377763 | 8.3:+10778762 | MS.gene58017:CDS |
| AAGGTTGATGTGATCTTTGC+TGG | 0.378443 | 8.3:+10780479 | MS.gene58017:CDS |
| TTATCCAGCTATTCTCCATT+TGG | 0.379906 | 8.3:+10779430 | MS.gene58017:CDS |
| TTGGTTTGCGGTGGGATACA+TGG | 0.381344 | 8.3:+10778717 | MS.gene58017:CDS |
| GACTGGACCCTGGTTCATCT+GGG | 0.388808 | 8.3:-10777966 | None:intergenic |
| ATTCATCATTGTCTTGTTGA+AGG | 0.390644 | 8.3:+10778081 | MS.gene58017:CDS |
| CCAAATTTGTAGGTGGCATC+TGG | 0.391166 | 8.3:-10778397 | None:intergenic |
| CAGATGCCACCTACAAATTT+GGG | 0.397664 | 8.3:+10778398 | MS.gene58017:CDS |
| TGAAGTGAACCTACCAATAC+TGG | 0.408402 | 8.3:-10781054 | None:intergenic |
| GGGTCCAGTCATGTACAATT+TGG | 0.411196 | 8.3:+10777979 | MS.gene58017:CDS |
| GAGATCTTTCTTATGCTGAT+AGG | 0.430471 | 8.3:+10778678 | MS.gene58017:CDS |
| TGCGAGTGGTTTACGAAAGC+TGG | 0.433609 | 8.3:+10780444 | MS.gene58017:CDS |
| ACGGTTTCAAATTACACTTT+CGG | 0.440557 | 8.3:+10778039 | MS.gene58017:CDS |
| AGTACACACCACAATGGAAA+TGG | 0.441734 | 8.3:+10780309 | MS.gene58017:CDS |
| TCCAGCATTTGCAGTTCCTA+AGG | 0.443867 | 8.3:+10777344 | MS.gene58017:CDS |
| ACCAATGATCCCAAATTTGT+AGG | 0.446529 | 8.3:-10778407 | None:intergenic |
| AAACCATACCGATCTTTCAT+AGG | 0.450195 | 8.3:-10780513 | None:intergenic |
| TTCAGCAGAGATGTGTATGC+AGG | 0.453445 | 8.3:+10777264 | MS.gene58017:CDS |
| CAACGTGGAGTGCCCATAGC+TGG | 0.454170 | 8.3:-10780942 | None:intergenic |
| CCCTTAGGAACTGCAAATGC+TGG | 0.455633 | 8.3:-10777345 | None:intergenic |
| TGAGGTGCATTATGTCCCTT+AGG | 0.458007 | 8.3:-10777360 | None:intergenic |
| ACAACATAACAACTGGTAAC+CGG | 0.458101 | 8.3:+10780703 | MS.gene58017:CDS |
| ATAGATTACAACATAACAAC+TGG | 0.461994 | 8.3:+10780696 | MS.gene58017:CDS |
| GCATTTCGTGAAGCCAGCTA+TGG | 0.469744 | 8.3:+10780929 | MS.gene58017:CDS |
| GTTACCAAATGGAGAATAGC+TGG | 0.473944 | 8.3:-10779434 | None:intergenic |
| CACTGGAACCGCAATGATGA+TGG | 0.473973 | 8.3:+10780995 | MS.gene58017:CDS |
| TTTGAAACACCTCCTAAAGT+TGG | 0.482762 | 8.3:+10778373 | MS.gene58017:CDS |
| ACTTTCGGGGAATACAAGTC+TGG | 0.489018 | 8.3:+10778054 | MS.gene58017:CDS |
| CATGGGCTCGATTTGTTGAA+AGG | 0.490455 | 8.3:+10778735 | MS.gene58017:CDS |
| ATCTACATTTCAGGTGATCT+GGG | 0.492376 | 8.3:+10778584 | MS.gene58017:intron |
| CTCTAGTGCTCTACCATGTA+GGG | 0.493891 | 8.3:-10778815 | None:intergenic |
| CAGCCATGGATATGGAATAC+AGG | 0.494179 | 8.3:+10778770 | MS.gene58017:CDS |
| AGTGGTATATCGTTGAAGAT+AGG | 0.499275 | 8.3:-10779335 | None:intergenic |
| TCTCTAGTGCTCTACCATGT+AGG | 0.502444 | 8.3:-10778816 | None:intergenic |
| ATTTGTCAGCTACGGGATAC+CGG | 0.505552 | 8.3:-10780722 | None:intergenic |
| GAAAAGCAGTAATCATCTCA+TGG | 0.507583 | 8.3:+10777938 | MS.gene58017:CDS |
| TCGTATTGCATAACCAGTAT+TGG | 0.514437 | 8.3:+10781041 | MS.gene58017:CDS |
| GCAAATGCTGGATGATTAAG+TGG | 0.518212 | 8.3:-10777333 | None:intergenic |
| ACGCCTGATTGCATACCAAA+GGG | 0.530829 | 8.3:-10779386 | None:intergenic |
| AATAGAGTACTTTCCCTACA+TGG | 0.530906 | 8.3:+10778802 | MS.gene58017:CDS |
| TAAGAAATACATACTTGTTG+AGG | 0.531408 | 8.3:-10777378 | None:intergenic |
| AGGTGCTGATTTGTCAGCTA+CGG | 0.538709 | 8.3:-10780730 | None:intergenic |
| TTGTCTTGTTGAAGGACTTG+AGG | 0.540359 | 8.3:+10778089 | MS.gene58017:CDS |
| GTGTACATCACGGTCGGAGA+TGG | 0.540371 | 8.3:+10780753 | MS.gene58017:CDS |
| ATCACACAAGGTGATTATGA+TGG | 0.540793 | 8.3:+10777916 | MS.gene58017:CDS |
| TCAATCTACTGCACAAGGCA+CGG | 0.543185 | 8.3:+10778020 | MS.gene58017:CDS |
| TCTCTGAGCCATTTCCATTG+TGG | 0.544206 | 8.3:-10780317 | None:intergenic |
| TGAGCTGCCACAGGTTGATA+GGG | 0.547830 | 8.3:+10780340 | MS.gene58017:CDS |
| GGTGCTGATTTGTCAGCTAC+GGG | 0.549793 | 8.3:-10780729 | None:intergenic |
| CAATGATGATGGCAAGAAAG+TGG | 0.559117 | 8.3:+10781006 | MS.gene58017:CDS |
| CATTTCGTGAAGCCAGCTAT+GGG | 0.559509 | 8.3:+10780930 | MS.gene58017:CDS |
| TTTCCTGTATTCCATATCCA+TGG | 0.562078 | 8.3:-10778773 | None:intergenic |
| CGTTGAAGATAGGACTTGAA+AGG | 0.566750 | 8.3:-10779325 | None:intergenic |
| GAACACATGCTGTCTACCAC+TGG | 0.567046 | 8.3:+10780978 | MS.gene58017:CDS |
| CCAGCATTTGCAGTTCCTAA+GGG | 0.567845 | 8.3:+10777345 | MS.gene58017:CDS |
| CACGCCTGATTGCATACCAA+AGG | 0.568929 | 8.3:-10779387 | None:intergenic |
| GCTCAGAGATGAGCTGCCAC+AGG | 0.569548 | 8.3:+10780331 | MS.gene58017:CDS |
| GCATCTGGTCCAACTTTAGG+AGG | 0.569812 | 8.3:-10778382 | None:intergenic |
| TGGGTGACCCCAGATGAACC+AGG | 0.573846 | 8.3:+10777958 | MS.gene58017:CDS |
| AGTACACTGATGTTGGTTTG+CGG | 0.573861 | 8.3:+10778705 | MS.gene58017:CDS |
| AGGTATCAGTACACTGATGT+TGG | 0.576726 | 8.3:+10778698 | MS.gene58017:CDS |
| GGAGTACAGCGTATCAGCCA+TGG | 0.578522 | 8.3:+10778756 | MS.gene58017:CDS |
| CTCTATATAGTGCTCAAGAG+TGG | 0.578714 | 8.3:-10778627 | None:intergenic |
| TACATCACGGTCGGAGATGG+AGG | 0.579269 | 8.3:+10780756 | MS.gene58017:CDS |
| TCAGCAGAGATGTGTATGCA+GGG | 0.579504 | 8.3:+10777265 | MS.gene58017:CDS |
| CTTTCTTGCCATCATCATTG+CGG | 0.582581 | 8.3:-10781003 | None:intergenic |
| TACTACTACAGAATTGGAAG+TGG | 0.583196 | 8.3:+10778328 | MS.gene58017:CDS |
| AATGCAGAGTATTCTGGCTG+AGG | 0.586901 | 8.3:-10780911 | None:intergenic |
| TGGTTTGCGGTGGGATACAT+GGG | 0.588603 | 8.3:+10778718 | MS.gene58017:CDS |
| CACTGATGTTGGTTTGCGGT+GGG | 0.590870 | 8.3:+10778709 | MS.gene58017:CDS |
| ACTGGACCCTGGTTCATCTG+GGG | 0.591269 | 8.3:-10777965 | None:intergenic |
| TGTGCCAAATTGTACATGAC+TGG | 0.592331 | 8.3:-10777983 | None:intergenic |
| TGTTCATGCCTATGAAAGAT+CGG | 0.594706 | 8.3:+10780505 | MS.gene58017:CDS |
| AAAAGCAGTAATCATCTCAT+GGG | 0.596532 | 8.3:+10777939 | MS.gene58017:CDS |
| TTAAGTGGAATATCAACAGA+TGG | 0.596627 | 8.3:-10777318 | None:intergenic |
| CATCATCATTGCGGTTCCAG+TGG | 0.598630 | 8.3:-10780994 | None:intergenic |
| ATCTTTCATAGGCATGAACA+TGG | 0.603823 | 8.3:-10780502 | None:intergenic |
| AAGAAAATAGAAAGATGCAG+AGG | 0.605085 | 8.3:+10777202 | None:intergenic |
| ACACTGATGTTGGTTTGCGG+TGG | 0.606840 | 8.3:+10778708 | MS.gene58017:CDS |
| AATATCAACAGATGGAAACT+CGG | 0.608614 | 8.3:-10777310 | None:intergenic |
| AATGAAGCTCACTTTATGGA+AGG | 0.608755 | 8.3:+10780413 | MS.gene58017:CDS |
| GCCTGATTGCATACCAAAGG+GGG | 0.618674 | 8.3:-10779384 | None:intergenic |
| AAGCTGGTTCATCAAGTACA+AGG | 0.625171 | 8.3:+10780460 | MS.gene58017:CDS |
| GGTTTCAAATTACACTTTCG+GGG | 0.626128 | 8.3:+10778041 | MS.gene58017:CDS |
| TCTCCGACCGTGATGTACAC+AGG | 0.629591 | 8.3:-10780750 | None:intergenic |
| TGCATGAGAACAATGAGCCA+AGG | 0.630461 | 8.3:-10780371 | None:intergenic |
| GGAGATGGAGGAAATCAAGA+AGG | 0.639359 | 8.3:+10780768 | MS.gene58017:CDS |
| TTGATAGGGAAAAGACACCT+TGG | 0.640827 | 8.3:+10780354 | MS.gene58017:CDS |
| GGAAGGTGAAAGCATGCGAG+TGG | 0.643581 | 8.3:+10780430 | MS.gene58017:CDS |
| AAATTTCAATCTACTGCACA+AGG | 0.649428 | 8.3:+10778015 | MS.gene58017:CDS |
| CAGTAAAGTACACACCACAA+TGG | 0.656235 | 8.3:+10780303 | MS.gene58017:intron |
| CGCCTGATTGCATACCAAAG+GGG | 0.656819 | 8.3:-10779385 | None:intergenic |
| GCACCTGTGTACATCACGGT+CGG | 0.660426 | 8.3:+10780747 | MS.gene58017:CDS |
| CAGCTATGGGCACTCCACGT+TGG | 0.662828 | 8.3:+10780943 | MS.gene58017:CDS |
| ATCAGCACCTGTGTACATCA+CGG | 0.663406 | 8.3:+10780743 | MS.gene58017:CDS |
| AATGATCCCAAATTTGTAGG+TGG | 0.663512 | 8.3:-10778404 | None:intergenic |
| AATTGTACATGACTGGACCC+TGG | 0.667509 | 8.3:-10777976 | None:intergenic |
| CTTGGACGCCAAATAAGGAG+TGG | 0.681481 | 8.3:-10779353 | None:intergenic |
| GGGTGACCCCAGATGAACCA+GGG | 0.686729 | 8.3:+10777959 | MS.gene58017:CDS |
| TTGTAGGTGCATATCACACA+AGG | 0.690964 | 8.3:+10777904 | MS.gene58017:intron |
| GCTTCATTACTGTTGTAGAG+CGG | 0.703187 | 8.3:-10780398 | None:intergenic |
| GTTATGCAATACGAATGAGT+CGG | 0.728481 | 8.3:-10781032 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATATATACTTCAATAAA+AGG | - | chr8.3:10780220-10780239 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGGATTATAAT+AGG | + | chr8.3:10779661-10779680 | MS.gene58017:intron | 15.0% |
| !! | GTATTTAGAAAAAATATGTT+TGG | + | chr8.3:10779612-10779631 | MS.gene58017:intron | 15.0% |
| !! | TATTAATATTTCTTACATGT+TGG | + | chr8.3:10779477-10779496 | MS.gene58017:intron | 15.0% |
| !!! | ATATTCTTTTACATAAACTT+AGG | + | chr8.3:10779509-10779528 | MS.gene58017:intron | 15.0% |
| !!! | TATTATAATCCCTATTTTTA+TGG | - | chr8.3:10779662-10779681 | None:intergenic | 15.0% |
| !!! | TATTCTTTTACATAAACTTA+GGG | + | chr8.3:10779510-10779529 | MS.gene58017:intron | 15.0% |
| !!! | TTGTGTATTTATTTATTTTC+TGG | + | chr8.3:10778845-10778864 | MS.gene58017:intron | 15.0% |
| !! | AAAAAATTTCCCAAAGAAAA+GGG | - | chr8.3:10779734-10779753 | None:intergenic | 20.0% |
| !! | AAGTGAAATAATTTCAAAAG+TGG | + | chr8.3:10778172-10778191 | MS.gene58017:intron | 20.0% |
| !! | AAGTTATATTTGTTTATTCC+TGG | - | chr8.3:10779842-10779861 | None:intergenic | 20.0% |
| !! | AGTTATATTTGTTTATTCCT+GGG | - | chr8.3:10779841-10779860 | None:intergenic | 20.0% |
| !! | ATAAGTGATCAATATTCAAT+AGG | - | chr8.3:10779976-10779995 | None:intergenic | 20.0% |
| !! | ATATATACTTCAATAAAAGG+TGG | - | chr8.3:10780217-10780236 | None:intergenic | 20.0% |
| !! | GTTAACTTTATAATATTCCT+AGG | + | chr8.3:10779634-10779653 | MS.gene58017:intron | 20.0% |
| !! | TAGTAAATTGTAACAAACAT+AGG | + | chr8.3:10779791-10779810 | MS.gene58017:intron | 20.0% |
| !! | TGTTATGTTGTAATCTATAT+TGG | - | chr8.3:10780694-10780713 | None:intergenic | 20.0% |
| !!! | AAATATAAATTTTCTACCAC+TGG | - | chr8.3:10777772-10777791 | None:intergenic | 20.0% |
| !!! | AATTTACTAAATTTTATCCC+CGG | - | chr8.3:10779780-10779799 | None:intergenic | 20.0% |
| !!! | CATATTTTTTCTAAATACCT+TGG | - | chr8.3:10779610-10779629 | None:intergenic | 20.0% |
| !!! | CTAGATACAATTATTCATTT+TGG | - | chr8.3:10778563-10778582 | None:intergenic | 20.0% |
| !!! | TCTAACTTTTATGTTTTAGT+TGG | + | chr8.3:10779918-10779937 | MS.gene58017:intron | 20.0% |
| ! | AAATTATGATGTTATGCCTA+TGG | + | chr8.3:10777729-10777748 | MS.gene58017:intron | 25.0% |
| ! | AAGTACATTCTTATGTTTGT+AGG | + | chr8.3:10780109-10780128 | MS.gene58017:intron | 25.0% |
| ! | ACACTAATGTGATAAAATCT+TGG | - | chr8.3:10777850-10777869 | None:intergenic | 25.0% |
| ! | ACAGCTTATATGTTTATAAG+CGG | + | chr8.3:10777465-10777484 | MS.gene58017:intron | 25.0% |
| ! | ACTAAATACTACTACAGAAT+TGG | + | chr8.3:10778322-10778341 | MS.gene58017:CDS | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr8.3:10779546-10779565 | MS.gene58017:intron | 25.0% |
| ! | ATAGATTACAACATAACAAC+TGG | + | chr8.3:10780696-10780715 | MS.gene58017:CDS | 25.0% |
| ! | ATTCCTTGGAATATAAAGAT+GGG | + | chr8.3:10779575-10779594 | MS.gene58017:intron | 25.0% |
| ! | GAAAAAATTTCCCAAAGAAA+AGG | - | chr8.3:10779735-10779754 | None:intergenic | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | - | chr8.3:10779555-10779574 | None:intergenic | 25.0% |
| ! | TAACTTAATTCTGTTACAGA+TGG | + | chr8.3:10780804-10780823 | MS.gene58017:intron | 25.0% |
| ! | TAATGAATCTTTGATTCATC+AGG | + | chr8.3:10777420-10777439 | MS.gene58017:intron | 25.0% |
| ! | TACTAAAAGAAACTTCACAA+AGG | - | chr8.3:10779188-10779207 | None:intergenic | 25.0% |
| ! | TGTGTAACCTATAATAGAAA+GGG | - | chr8.3:10779255-10779274 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAATATCTTCT+AGG | - | chr8.3:10777692-10777711 | None:intergenic | 25.0% |
| !! | AGTTTCAGTTTTCACATTTT+TGG | + | chr8.3:10778895-10778914 | MS.gene58017:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8.3:10777665-10777684 | MS.gene58017:intron | 25.0% |
| !! | ATTTACTAAATTTTATCCCC+GGG | - | chr8.3:10779779-10779798 | None:intergenic | 25.0% |
| !! | ATTTCTATCATTTTATTCCC+AGG | + | chr8.3:10779821-10779840 | MS.gene58017:intron | 25.0% |
| !! | TAAGAAATACATACTTGTTG+AGG | - | chr8.3:10777381-10777400 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8.3:10777666-10777685 | MS.gene58017:intron | 25.0% |
| !!! | ATTGTTTTTCATGTAACCAT+AGG | - | chr8.3:10777748-10777767 | None:intergenic | 25.0% |
| AAAAGCAGTAATCATCTCAT+GGG | + | chr8.3:10777939-10777958 | MS.gene58017:CDS | 30.0% | |
| AAATGTGAAAACTGAAACTG+TGG | - | chr8.3:10778894-10778913 | None:intergenic | 30.0% | |
| AAATTCCAACGGAATGAAAA+CGG | - | chr8.3:10779082-10779101 | None:intergenic | 30.0% | |
| AAATTTCAATCTACTGCACA+AGG | + | chr8.3:10778015-10778034 | MS.gene58017:CDS | 30.0% | |
| AACACAAAGAAAAATGCGAA+CGG | - | chr8.3:10778254-10778273 | None:intergenic | 30.0% | |
| AACGATGAAAAAGATTATGC+AGG | - | chr8.3:10778447-10778466 | None:intergenic | 30.0% | |
| AAGCAAAAAGAAATCCTCAT+AGG | - | chr8.3:10778509-10778528 | None:intergenic | 30.0% | |
| AATATCAACAGATGGAAACT+CGG | - | chr8.3:10777313-10777332 | None:intergenic | 30.0% | |
| AATATTCAATAGGACGTCAA+AGG | - | chr8.3:10779966-10779985 | None:intergenic | 30.0% | |
| AATGATATGCTAAGAACCTA+GGG | - | chr8.3:10779877-10779896 | None:intergenic | 30.0% | |
| ACAAAACTACAGGAATAGAA+AGG | - | chr8.3:10779053-10779072 | None:intergenic | 30.0% | |
| ACGATGAAAAAGATTATGCA+GGG | - | chr8.3:10778446-10778465 | None:intergenic | 30.0% | |
| ACGGTTTCAAATTACACTTT+CGG | + | chr8.3:10778039-10778058 | MS.gene58017:CDS | 30.0% | |
| ATTCCCATCTTTATATTCCA+AGG | - | chr8.3:10779581-10779600 | None:intergenic | 30.0% | |
| CATTCCTTGGAATATAAAGA+TGG | + | chr8.3:10779574-10779593 | MS.gene58017:intron | 30.0% | |
| GATATAAATCTGCTTGATCA+GGG | + | chr8.3:10779292-10779311 | MS.gene58017:intron | 30.0% | |
| GTATCTAGTATCTACATTTC+AGG | + | chr8.3:10778575-10778594 | MS.gene58017:intron | 30.0% | |
| GTGTGTAACCTATAATAGAA+AGG | - | chr8.3:10779256-10779275 | None:intergenic | 30.0% | |
| TACATGAAAAACAATTCCAG+TGG | + | chr8.3:10777753-10777772 | MS.gene58017:intron | 30.0% | |
| TCATGCATAATACAGAGAAA+AGG | - | chr8.3:10778987-10779006 | None:intergenic | 30.0% | |
| TCCTAGGAACCATAAAAATA+GGG | + | chr8.3:10779650-10779669 | MS.gene58017:intron | 30.0% | |
| TCTTATGTTTGTAGGTCTAA+AGG | + | chr8.3:10780117-10780136 | MS.gene58017:intron | 30.0% | |
| TGAGGTAATTGTTTCAGATA+AGG | + | chr8.3:10778107-10778126 | MS.gene58017:intron | 30.0% | |
| TGATATAAATCTGCTTGATC+AGG | + | chr8.3:10779291-10779310 | MS.gene58017:intron | 30.0% | |
| TTAAGTGGAATATCAACAGA+TGG | - | chr8.3:10777321-10777340 | None:intergenic | 30.0% | |
| TTCCTAGGAACCATAAAAAT+AGG | + | chr8.3:10779649-10779668 | MS.gene58017:intron | 30.0% | |
| TTCTTCTTAACTACTATGTC+TGG | + | chr8.3:10778950-10778969 | MS.gene58017:intron | 30.0% | |
| ! | AAGATGGGAATTTTATTCCA+AGG | + | chr8.3:10779590-10779609 | MS.gene58017:intron | 30.0% |
| ! | ATTCATCATTGTCTTGTTGA+AGG | + | chr8.3:10778081-10778100 | MS.gene58017:CDS | 30.0% |
| ! | TAGCACTTTTGCTTGTATAT+GGG | - | chr8.3:10780022-10780041 | None:intergenic | 30.0% |
| ! | TGTTTTCATAGATGAAGCAT+AGG | - | chr8.3:10777448-10777467 | None:intergenic | 30.0% |
| ! | TTAGCACTTTTGCTTGTATA+TGG | - | chr8.3:10780023-10780042 | None:intergenic | 30.0% |
| !! | GCAGCGATTTATTATTTTAC+TGG | - | chr8.3:10778872-10778891 | None:intergenic | 30.0% |
| !! | GTCTCATGATTTTAATGATG+TGG | + | chr8.3:10778533-10778552 | MS.gene58017:intron | 30.0% |
| !! | GTGTTGTTTATTTCCATTGT+AGG | + | chr8.3:10777888-10777907 | MS.gene58017:intron | 30.0% |
| !! | TACATAAAGTATTGCCTATG+AGG | + | chr8.3:10778492-10778511 | MS.gene58017:intron | 30.0% |
| !!! | AGTTTTCACATTTTTGGCAT+TGG | + | chr8.3:10778901-10778920 | MS.gene58017:intron | 30.0% |
| !!! | GCACGTTTTAATTCTGTTAT+TGG | + | chr8.3:10780870-10780889 | MS.gene58017:intron | 30.0% |
| !!! | TCTATTTTTTATCTCCAACG+TGG | - | chr8.3:10780960-10780979 | None:intergenic | 30.0% |
| AAACCATACCGATCTTTCAT+AGG | - | chr8.3:10780516-10780535 | None:intergenic | 35.0% | |
| AAATTTCCCAAAGAAAAGGG+TGG | - | chr8.3:10779731-10779750 | None:intergenic | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr8.3:10779707-10779726 | None:intergenic | 35.0% | |
| AATGAAGCTCACTTTATGGA+AGG | + | chr8.3:10780413-10780432 | MS.gene58017:CDS | 35.0% | |
| AATGATCCCAAATTTGTAGG+TGG | - | chr8.3:10778407-10778426 | None:intergenic | 35.0% | |
| AATTCTGTTATTGGTCGTGA+AGG | + | chr8.3:10780879-10780898 | MS.gene58017:intron | 35.0% | |
| ACAACATAACAACTGGTAAC+CGG | + | chr8.3:10780703-10780722 | MS.gene58017:CDS | 35.0% | |
| ACCAATGATCCCAAATTTGT+AGG | - | chr8.3:10778410-10778429 | None:intergenic | 35.0% | |
| ACGATATACCACTCCTTATT+TGG | + | chr8.3:10779345-10779364 | MS.gene58017:CDS | 35.0% | |
| AGATGTTTACTTCTCTACCT+TGG | + | chr8.3:10780048-10780067 | MS.gene58017:intron | 35.0% | |
| AGTGGTATATCGTTGAAGAT+AGG | - | chr8.3:10779338-10779357 | None:intergenic | 35.0% | |
| ATCACACAAGGTGATTATGA+TGG | + | chr8.3:10777916-10777935 | MS.gene58017:CDS | 35.0% | |
| ATCTCTGCTGAAAAACACAA+AGG | - | chr8.3:10777256-10777275 | None:intergenic | 35.0% | |
| ATCTTTCATAGGCATGAACA+TGG | - | chr8.3:10780505-10780524 | None:intergenic | 35.0% | |
| ATGTTTACTTCTCTACCTTG+GGG | + | chr8.3:10780050-10780069 | MS.gene58017:intron | 35.0% | |
| CAATGATATGCTAAGAACCT+AGG | - | chr8.3:10779878-10779897 | None:intergenic | 35.0% | |
| CAGTAATGAAGCTCACTTTA+TGG | + | chr8.3:10780409-10780428 | MS.gene58017:CDS | 35.0% | |
| CGGTTTCAAATTACACTTTC+GGG | + | chr8.3:10778040-10778059 | MS.gene58017:CDS | 35.0% | |
| CTAGGTTCTTAGCATATCAT+TGG | + | chr8.3:10779876-10779895 | MS.gene58017:intron | 35.0% | |
| CTTCACACCCTTTCTATTAT+AGG | + | chr8.3:10779245-10779264 | MS.gene58017:intron | 35.0% | |
| CTTCAGCATAACATATGAAG+CGG | - | chr8.3:10779132-10779151 | None:intergenic | 35.0% | |
| GAAAAGCAGTAATCATCTCA+TGG | + | chr8.3:10777938-10777957 | MS.gene58017:CDS | 35.0% | |
| GAATTTATTCCCATCTCCAT+GGG | + | chr8.3:10779695-10779714 | MS.gene58017:intron | 35.0% | |
| GAGAAATGTGTATGCAATAG+TGG | + | chr8.3:10777706-10777725 | MS.gene58017:intron | 35.0% | |
| GAGAGTAGAATTATCATCAC+TGG | + | chr8.3:10778129-10778148 | MS.gene58017:intron | 35.0% | |
| GAGATCTTTCTTATGCTGAT+AGG | + | chr8.3:10778678-10778697 | MS.gene58017:CDS | 35.0% | |
| GATGTTTACTTCTCTACCTT+GGG | + | chr8.3:10780049-10780068 | MS.gene58017:intron | 35.0% | |
| GCTCAAACTGTTCTATTTGT+TGG | + | chr8.3:10778656-10778675 | MS.gene58017:CDS | 35.0% | |
| GGTTTCAAATTACACTTTCG+GGG | + | chr8.3:10778041-10778060 | MS.gene58017:CDS | 35.0% | |
| GTTATGCAATACGAATGAGT+CGG | - | chr8.3:10781035-10781054 | None:intergenic | 35.0% | |
| TACTACTACAGAATTGGAAG+TGG | + | chr8.3:10778328-10778347 | MS.gene58017:CDS | 35.0% | |
| TGAATTTATTCCCATCTCCA+TGG | + | chr8.3:10779694-10779713 | MS.gene58017:intron | 35.0% | |
| TGTTCATGCCTATGAAAGAT+CGG | + | chr8.3:10780505-10780524 | MS.gene58017:CDS | 35.0% | |
| TTATCCAGCTATTCTCCATT+TGG | + | chr8.3:10779430-10779449 | MS.gene58017:CDS | 35.0% | |
| TTATTGGTCGTGAAGGTTTA+GGG | + | chr8.3:10780886-10780905 | MS.gene58017:intron | 35.0% | |
| TTCAGCATAACATATGAAGC+GGG | - | chr8.3:10779131-10779150 | None:intergenic | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | - | chr8.3:10779566-10779585 | None:intergenic | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | + | chr8.3:10779561-10779580 | MS.gene58017:intron | 35.0% | |
| TTTCCTGTATTCCATATCCA+TGG | - | chr8.3:10778776-10778795 | None:intergenic | 35.0% | |
| ! | AATAGAGTACTTTCCCTACA+TGG | + | chr8.3:10778802-10778821 | MS.gene58017:CDS | 35.0% |
| ! | ACCTACAAATTTGGGATCAT+TGG | + | chr8.3:10778406-10778425 | MS.gene58017:CDS | 35.0% |
| ! | ACGGTTTTCTACAAAACTAC+AGG | - | chr8.3:10779063-10779082 | None:intergenic | 35.0% |
| ! | AGAGCAGATTAGTTACCAAA+TGG | - | chr8.3:10779448-10779467 | None:intergenic | 35.0% |
| ! | AGCACTTTTGCTTGTATATG+GGG | - | chr8.3:10780021-10780040 | None:intergenic | 35.0% |
| ! | ATCTACATTTCAGGTGATCT+GGG | + | chr8.3:10778584-10778603 | MS.gene58017:intron | 35.0% |
| ! | GTGATTCTTCTCGAGAATTT+TGG | + | chr8.3:10778350-10778369 | MS.gene58017:CDS | 35.0% |
| ! | TATCTACATTTCAGGTGATC+TGG | + | chr8.3:10778583-10778602 | MS.gene58017:intron | 35.0% |
| ! | TTATTGCCACCCTTTTCTTT+GGG | + | chr8.3:10779722-10779741 | MS.gene58017:intron | 35.0% |
| ! | TTTATTGCCACCCTTTTCTT+TGG | + | chr8.3:10779721-10779740 | MS.gene58017:intron | 35.0% |
| ! | TTTGAAACACCTCCTAAAGT+TGG | + | chr8.3:10778373-10778392 | MS.gene58017:CDS | 35.0% |
| !!! | GGGAAATTTTTTCTATTCCC+AGG | + | chr8.3:10779742-10779761 | MS.gene58017:intron | 35.0% |
| !!! | TCCCTATTTTTATGGTTCCT+AGG | - | chr8.3:10779654-10779673 | None:intergenic | 35.0% |
| AAGTATGCTGTCATGTGCAA+TGG | - | chr8.3:10779010-10779029 | None:intergenic | 40.0% | |
| AATATCTTCTAGGCCCTGTT+TGG | - | chr8.3:10777682-10777701 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr8.3:10779858-10779877 | MS.gene58017:intron | 40.0% | |
| AGGTATCAGTACACTGATGT+TGG | + | chr8.3:10778698-10778717 | MS.gene58017:CDS | 40.0% | |
| AGTACACACCACAATGGAAA+TGG | + | chr8.3:10780309-10780328 | MS.gene58017:CDS | 40.0% | |
| ATCAAGAAGGTCTTGCTTCT+AGG | + | chr8.3:10780781-10780800 | MS.gene58017:CDS | 40.0% | |
| ATGCCTATGAAAGATCGGTA+TGG | + | chr8.3:10780510-10780529 | MS.gene58017:intron | 40.0% | |
| CAATAAAGTTCCCATGGAGA+TGG | - | chr8.3:10779708-10779727 | None:intergenic | 40.0% | |
| CAGATGCCACCTACAAATTT+GGG | + | chr8.3:10778398-10778417 | MS.gene58017:CDS | 40.0% | |
| CAGTAAAGTACACACCACAA+TGG | + | chr8.3:10780303-10780322 | MS.gene58017:intron | 40.0% | |
| CGTTGAAGATAGGACTTGAA+AGG | - | chr8.3:10779328-10779347 | None:intergenic | 40.0% | |
| CTCTATATAGTGCTCAAGAG+TGG | - | chr8.3:10778630-10778649 | None:intergenic | 40.0% | |
| CTTTCTTGCCATCATCATTG+CGG | - | chr8.3:10781006-10781025 | None:intergenic | 40.0% | |
| GCAAATGCTGGATGATTAAG+TGG | - | chr8.3:10777336-10777355 | None:intergenic | 40.0% | |
| GCACACATAAGAATCCACTA+CGG | - | chr8.3:10780639-10780658 | None:intergenic | 40.0% | |
| GCCTGCTAACAAAATTCCAA+CGG | - | chr8.3:10779093-10779112 | None:intergenic | 40.0% | |
| GCTTCATTACTGTTGTAGAG+CGG | - | chr8.3:10780401-10780420 | None:intergenic | 40.0% | |
| GTTACCAAATGGAGAATAGC+TGG | - | chr8.3:10779437-10779456 | None:intergenic | 40.0% | |
| GTTATTGGTCGTGAAGGTTT+AGG | + | chr8.3:10780885-10780904 | MS.gene58017:intron | 40.0% | |
| TCAGCATAACATATGAAGCG+GGG | - | chr8.3:10779130-10779149 | None:intergenic | 40.0% | |
| TGTGCCAAATTGTACATGAC+TGG | - | chr8.3:10777986-10778005 | None:intergenic | 40.0% | |
| TGTGTGATATGCACCTACAA+TGG | - | chr8.3:10777904-10777923 | None:intergenic | 40.0% | |
| TTGATAGGGAAAAGACACCT+TGG | + | chr8.3:10780354-10780373 | MS.gene58017:CDS | 40.0% | |
| TTGTAGGTGCATATCACACA+AGG | + | chr8.3:10777904-10777923 | MS.gene58017:intron | 40.0% | |
| ! | AAGCTGGTTCATCAAGTACA+AGG | + | chr8.3:10780460-10780479 | MS.gene58017:CDS | 40.0% |
| ! | AGGGTGTGAAGTTTTCAACA+CGG | - | chr8.3:10779236-10779255 | None:intergenic | 40.0% |
| ! | GAAAACCGTTTTCATTCCGT+TGG | + | chr8.3:10779074-10779093 | MS.gene58017:intron | 40.0% |
| ! | TCACGAAATGCAGAGTATTC+TGG | - | chr8.3:10780920-10780939 | None:intergenic | 40.0% |
| ! | TCATTCCCTGCTCATGTTTT+GGG | + | chr8.3:10780536-10780555 | MS.gene58017:intron | 40.0% |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr8.3:10779758-10779777 | MS.gene58017:intron | 40.0% |
| ! | TCCGTTGGAATTTTGTTAGC+AGG | + | chr8.3:10779089-10779108 | MS.gene58017:intron | 40.0% |
| ! | TTCATTCCCTGCTCATGTTT+TGG | + | chr8.3:10780535-10780554 | MS.gene58017:intron | 40.0% |
| ! | TTGTCTTGTTGAAGGACTTG+AGG | + | chr8.3:10778089-10778108 | MS.gene58017:CDS | 40.0% |
| !! | AAGGTTGATGTGATCTTTGC+TGG | + | chr8.3:10780479-10780498 | MS.gene58017:CDS | 40.0% |
| !! | AGTACACTGATGTTGGTTTG+CGG | + | chr8.3:10778705-10778724 | MS.gene58017:CDS | 40.0% |
| !! | CAATGATGATGGCAAGAAAG+TGG | + | chr8.3:10781006-10781025 | MS.gene58017:CDS | 40.0% |
| !! | CATGGAGTTGCATGCTATTT+TGG | + | chr8.3:10780572-10780591 | MS.gene58017:intron | 40.0% |
| AATTGTACATGACTGGACCC+TGG | - | chr8.3:10777979-10777998 | None:intergenic | 45.0% | |
| ACGCCTGATTGCATACCAAA+GGG | - | chr8.3:10779389-10779408 | None:intergenic | 45.0% | |
| ACTTTCGGGGAATACAAGTC+TGG | + | chr8.3:10778054-10778073 | MS.gene58017:CDS | 45.0% | |
| AGGAACCCAAAACATGAGCA+GGG | - | chr8.3:10780544-10780563 | None:intergenic | 45.0% | |
| ATCAGCACCTGTGTACATCA+CGG | + | chr8.3:10780743-10780762 | MS.gene58017:CDS | 45.0% | |
| ATTTGTCAGCTACGGGATAC+CGG | - | chr8.3:10780725-10780744 | None:intergenic | 45.0% | |
| CAGCCATGGATATGGAATAC+AGG | + | chr8.3:10778770-10778789 | MS.gene58017:CDS | 45.0% | |
| CATTTCGTGAAGCCAGCTAT+GGG | + | chr8.3:10780930-10780949 | MS.gene58017:CDS | 45.0% | |
| CCAAATTTGTAGGTGGCATC+TGG | - | chr8.3:10778400-10778419 | None:intergenic | 45.0% | |
| CCAGATGCCACCTACAAATT+TGG | + | chr8.3:10778397-10778416 | MS.gene58017:CDS | 45.0% | |
| CCAGCATTTGCAGTTCCTAA+GGG | + | chr8.3:10777345-10777364 | MS.gene58017:CDS | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr8.3:10779762-10779781 | None:intergenic | 45.0% | |
| CTCTAGTGCTCTACCATGTA+GGG | - | chr8.3:10778818-10778837 | None:intergenic | 45.0% | |
| GGAGAATCGATACTGAAAGC+AGG | - | chr8.3:10780673-10780692 | None:intergenic | 45.0% | |
| GGAGATGGAGGAAATCAAGA+AGG | + | chr8.3:10780768-10780787 | MS.gene58017:CDS | 45.0% | |
| GGGTCCAGTCATGTACAATT+TGG | + | chr8.3:10777979-10777998 | MS.gene58017:CDS | 45.0% | |
| GTACTCTTGGACGCCAAATA+AGG | - | chr8.3:10779361-10779380 | None:intergenic | 45.0% | |
| TCAATCTACTGCACAAGGCA+CGG | + | chr8.3:10778020-10778039 | MS.gene58017:CDS | 45.0% | |
| TCAGCAGAGATGTGTATGCA+GGG | + | chr8.3:10777265-10777284 | MS.gene58017:CDS | 45.0% | |
| TCCAGCATTTGCAGTTCCTA+AGG | + | chr8.3:10777344-10777363 | MS.gene58017:CDS | 45.0% | |
| TCTCTAGTGCTCTACCATGT+AGG | - | chr8.3:10778819-10778838 | None:intergenic | 45.0% | |
| TCTCTGAGCCATTTCCATTG+TGG | - | chr8.3:10780320-10780339 | None:intergenic | 45.0% | |
| TGAGGTGCATTATGTCCCTT+AGG | - | chr8.3:10777363-10777382 | None:intergenic | 45.0% | |
| TGCAACTCCATGTATTGTGC+AGG | - | chr8.3:10780564-10780583 | None:intergenic | 45.0% | |
| TGCATGAGAACAATGAGCCA+AGG | - | chr8.3:10780374-10780393 | None:intergenic | 45.0% | |
| TTAGTCATGTGATGCCGTAG+TGG | + | chr8.3:10780622-10780641 | MS.gene58017:intron | 45.0% | |
| TTCAGCAGAGATGTGTATGC+AGG | + | chr8.3:10777264-10777283 | MS.gene58017:CDS | 45.0% | |
| TTGGGTTCCTGCACAATACA+TGG | + | chr8.3:10780554-10780573 | MS.gene58017:intron | 45.0% | |
| ! | AATGCAGAGTATTCTGGCTG+AGG | - | chr8.3:10780914-10780933 | None:intergenic | 45.0% |
| ! | CCAGGAACATTTTATACCCG+GGG | + | chr8.3:10779760-10779779 | MS.gene58017:intron | 45.0% |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr8.3:10779759-10779778 | MS.gene58017:intron | 45.0% |
| ! | GGGTGTGAAGTTTTCAACAC+GGG | - | chr8.3:10779235-10779254 | None:intergenic | 45.0% |
| ! | GTCTTTTCCCTATCAACCTG+TGG | - | chr8.3:10780350-10780369 | None:intergenic | 45.0% |
| !! | AGGTGCTGATTTGTCAGCTA+CGG | - | chr8.3:10780733-10780752 | None:intergenic | 45.0% |
| !! | CATGGGCTCGATTTGTTGAA+AGG | + | chr8.3:10778735-10778754 | MS.gene58017:CDS | 45.0% |
| CACGCCTGATTGCATACCAA+AGG | - | chr8.3:10779390-10779409 | None:intergenic | 50.0% | |
| CACTGGAACCGCAATGATGA+TGG | + | chr8.3:10780995-10781014 | MS.gene58017:CDS | 50.0% | |
| CAGCGTATCAGCCATGGATA+TGG | + | chr8.3:10778762-10778781 | MS.gene58017:CDS | 50.0% | |
| CAGGAACCCAAAACATGAGC+AGG | - | chr8.3:10780545-10780564 | None:intergenic | 50.0% | |
| CATCATCATTGCGGTTCCAG+TGG | - | chr8.3:10780997-10781016 | None:intergenic | 50.0% | |
| CCCCGGGTATAAAATGTTCC+TGG | - | chr8.3:10779763-10779782 | None:intergenic | 50.0% | |
| CCCTTAGGAACTGCAAATGC+TGG | - | chr8.3:10777348-10777367 | None:intergenic | 50.0% | |
| CGCCTGATTGCATACCAAAG+GGG | - | chr8.3:10779388-10779407 | None:intergenic | 50.0% | |
| CTTGGACGCCAAATAAGGAG+TGG | - | chr8.3:10779356-10779375 | None:intergenic | 50.0% | |
| GAACACATGCTGTCTACCAC+TGG | + | chr8.3:10780978-10780997 | MS.gene58017:CDS | 50.0% | |
| GCATCTGGTCCAACTTTAGG+AGG | - | chr8.3:10778385-10778404 | None:intergenic | 50.0% | |
| GCATTTCGTGAAGCCAGCTA+TGG | + | chr8.3:10780929-10780948 | MS.gene58017:CDS | 50.0% | |
| GCCTGATTGCATACCAAAGG+GGG | - | chr8.3:10779387-10779406 | None:intergenic | 50.0% | |
| GGGTGGCAATAAAGTTCCCA+TGG | - | chr8.3:10779714-10779733 | None:intergenic | 50.0% | |
| GTGGCATCTGGTCCAACTTT+AGG | - | chr8.3:10778388-10778407 | None:intergenic | 50.0% | |
| TGCGAGTGGTTTACGAAAGC+TGG | + | chr8.3:10780444-10780463 | MS.gene58017:CDS | 50.0% | |
| ! | TGGTTTGCGGTGGGATACAT+GGG | + | chr8.3:10778718-10778737 | MS.gene58017:CDS | 50.0% |
| !! | ACACTGATGTTGGTTTGCGG+TGG | + | chr8.3:10778708-10778727 | MS.gene58017:CDS | 50.0% |
| !! | ATGAGCTGCCACAGGTTGAT+AGG | + | chr8.3:10780339-10780358 | MS.gene58017:CDS | 50.0% |
| !! | CACTGATGTTGGTTTGCGGT+GGG | + | chr8.3:10778709-10778728 | MS.gene58017:CDS | 50.0% |
| !! | GGTGCTGATTTGTCAGCTAC+GGG | - | chr8.3:10780732-10780751 | None:intergenic | 50.0% |
| !! | TGAGCTGCCACAGGTTGATA+GGG | + | chr8.3:10780340-10780359 | MS.gene58017:CDS | 50.0% |
| !! | TTGGTTTGCGGTGGGATACA+TGG | + | chr8.3:10778717-10778736 | MS.gene58017:CDS | 50.0% |
| ACTGGACCCTGGTTCATCTG+GGG | - | chr8.3:10777968-10777987 | None:intergenic | 55.0% | |
| AGTCTAGCACTTGCTCCCCA+AGG | - | chr8.3:10780068-10780087 | None:intergenic | 55.0% | |
| GACTGGACCCTGGTTCATCT+GGG | - | chr8.3:10777969-10777988 | None:intergenic | 55.0% | |
| GATTGCATACCAAAGGGGGC+TGG | - | chr8.3:10779383-10779402 | None:intergenic | 55.0% | |
| GCACCTGTGTACATCACGGT+CGG | + | chr8.3:10780747-10780766 | MS.gene58017:CDS | 55.0% | |
| GCCCCCTTTGGTATGCAATC+AGG | + | chr8.3:10779383-10779402 | MS.gene58017:CDS | 55.0% | |
| GGAGTACAGCGTATCAGCCA+TGG | + | chr8.3:10778756-10778775 | MS.gene58017:CDS | 55.0% | |
| GTGTACATCACGGTCGGAGA+TGG | + | chr8.3:10780753-10780772 | MS.gene58017:CDS | 55.0% | |
| TACATCACGGTCGGAGATGG+AGG | + | chr8.3:10780756-10780775 | MS.gene58017:CDS | 55.0% | |
| TCTCCGACCGTGATGTACAC+AGG | - | chr8.3:10780753-10780772 | None:intergenic | 55.0% | |
| TGACTGGACCCTGGTTCATC+TGG | - | chr8.3:10777970-10777989 | None:intergenic | 55.0% | |
| ! | GGAAGGTGAAAGCATGCGAG+TGG | + | chr8.3:10780430-10780449 | MS.gene58017:CDS | 55.0% |
| CAGCTATGGGCACTCCACGT+TGG | + | chr8.3:10780943-10780962 | MS.gene58017:CDS | 60.0% | |
| GCTCAGAGATGAGCTGCCAC+AGG | + | chr8.3:10780331-10780350 | MS.gene58017:CDS | 60.0% | |
| GGGTGACCCCAGATGAACCA+GGG | + | chr8.3:10777959-10777978 | MS.gene58017:CDS | 60.0% | |
| TGGGTGACCCCAGATGAACC+AGG | + | chr8.3:10777958-10777977 | MS.gene58017:CDS | 60.0% | |
| ! | CAACGTGGAGTGCCCATAGC+TGG | - | chr8.3:10780945-10780964 | None:intergenic | 60.0% |
| ! | CCAAAGGGGGCTGGTACTCT+TGG | - | chr8.3:10779374-10779393 | None:intergenic | 60.0% |
| !! | CCAAGAGTACCAGCCCCCTT+TGG | + | chr8.3:10779371-10779390 | MS.gene58017:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10777216 | 10781062 | 10777216 | ID=MS.gene58017 |
| chr8.3 | mRNA | 10777216 | 10781062 | 10777216 | ID=MS.gene58017.t1;Parent=MS.gene58017 |
| chr8.3 | exon | 10777216 | 10777386 | 10777216 | ID=MS.gene58017.t1.exon1;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10777216 | 10777386 | 10777216 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10777910 | 10778110 | 10777910 | ID=MS.gene58017.t1.exon2;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10777910 | 10778110 | 10777910 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10778316 | 10778427 | 10778316 | ID=MS.gene58017.t1.exon3;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10778316 | 10778427 | 10778316 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10778597 | 10778823 | 10778597 | ID=MS.gene58017.t1.exon4;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10778597 | 10778823 | 10778597 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10779313 | 10779451 | 10779313 | ID=MS.gene58017.t1.exon5;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10779313 | 10779451 | 10779313 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10780306 | 10780526 | 10780306 | ID=MS.gene58017.t1.exon6;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10780306 | 10780526 | 10780306 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10780681 | 10780802 | 10780681 | ID=MS.gene58017.t1.exon7;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10780681 | 10780802 | 10780681 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| chr8.3 | exon | 10780901 | 10781062 | 10780901 | ID=MS.gene58017.t1.exon8;Parent=MS.gene58017.t1 |
| chr8.3 | CDS | 10780901 | 10781062 | 10780901 | ID=cds.MS.gene58017.t1;Parent=MS.gene58017.t1 |
| Gene Sequence |
| Protein sequence |
