Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58016.t1 | AFK47719.1 | 98 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 5.10E-266 | 926.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58016.t1 | Q949Y3 | 78.0 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 2.1e-220 | 766.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58016.t1 | I3T5C7 | 98.0 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 3.7e-266 | 926.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene91456 | MS.gene58016 | PPI |
| MS.gene91457 | MS.gene58016 | PPI |
| MS.gene58016 | MS.gene83723 | PPI |
| MS.gene029291 | MS.gene58016 | PPI |
| MS.gene037272 | MS.gene58016 | PPI |
| MS.gene72585 | MS.gene58016 | PPI |
| MS.gene74939 | MS.gene58016 | PPI |
| MS.gene83724 | MS.gene58016 | PPI |
| MS.gene065024 | MS.gene58016 | PPI |
| MS.gene54918 | MS.gene58016 | PPI |
| MS.gene72586 | MS.gene58016 | PPI |
| MS.gene58016 | MS.gene54917 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58016.t1 | MTR_4g115670 | 98.004 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 0.0 | 918 |
| MS.gene58016.t1 | MTR_0188s0020 | 61.682 | 428 | 161 | 2 | 26 | 451 | 32 | 458 | 0.0 | 556 |
| MS.gene58016.t1 | MTR_4g037105 | 60.789 | 431 | 166 | 2 | 23 | 451 | 23 | 452 | 0.0 | 553 |
| MS.gene58016.t1 | MTR_1g112630 | 60.648 | 432 | 166 | 3 | 23 | 451 | 24 | 454 | 0.0 | 546 |
| MS.gene58016.t1 | MTR_3g051240 | 43.367 | 392 | 195 | 7 | 55 | 445 | 43 | 408 | 2.51e-101 | 309 |
| MS.gene58016.t1 | MTR_5g092360 | 41.872 | 406 | 209 | 7 | 41 | 445 | 35 | 414 | 1.42e-99 | 305 |
| MS.gene58016.t1 | MTR_7g104360 | 41.832 | 404 | 206 | 9 | 48 | 447 | 38 | 416 | 2.95e-98 | 301 |
| MS.gene58016.t1 | MTR_1g060360 | 43.257 | 393 | 198 | 8 | 55 | 446 | 46 | 414 | 1.68e-96 | 297 |
| MS.gene58016.t1 | MTR_7g104330 | 41.919 | 396 | 202 | 8 | 50 | 443 | 49 | 418 | 5.82e-96 | 296 |
| MS.gene58016.t1 | MTR_6g013050 | 34.864 | 479 | 223 | 11 | 36 | 439 | 52 | 516 | 7.59e-77 | 251 |
| MS.gene58016.t1 | MTR_3g083810 | 34.350 | 492 | 231 | 12 | 36 | 450 | 52 | 528 | 1.02e-72 | 239 |
| MS.gene58016.t1 | MTR_6g013050 | 34.490 | 461 | 213 | 11 | 36 | 421 | 52 | 498 | 4.91e-71 | 234 |
| MS.gene58016.t1 | MTR_7g056403 | 32.653 | 490 | 238 | 11 | 38 | 450 | 53 | 527 | 4.11e-69 | 229 |
| MS.gene58016.t1 | MTR_3g083820 | 33.943 | 492 | 233 | 12 | 36 | 450 | 52 | 528 | 4.63e-69 | 229 |
| MS.gene58016.t1 | MTR_4g037670 | 28.998 | 469 | 242 | 22 | 14 | 435 | 189 | 613 | 1.20e-33 | 134 |
| MS.gene58016.t1 | MTR_1g052505 | 28.235 | 425 | 228 | 18 | 14 | 390 | 167 | 562 | 1.18e-32 | 130 |
| MS.gene58016.t1 | MTR_3g074930 | 26.696 | 457 | 267 | 18 | 42 | 451 | 170 | 605 | 2.88e-26 | 112 |
| MS.gene58016.t1 | MTR_3g074930 | 26.551 | 403 | 250 | 13 | 81 | 451 | 224 | 612 | 4.17e-26 | 111 |
| MS.gene58016.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 67 | 532 | 3.32e-24 | 105 |
| MS.gene58016.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 144 | 609 | 4.91e-24 | 105 |
| MS.gene58016.t1 | MTR_8g063080 | 25.785 | 446 | 266 | 19 | 53 | 451 | 167 | 594 | 5.54e-24 | 105 |
| MS.gene58016.t1 | MTR_4g082930 | 24.276 | 449 | 258 | 18 | 54 | 438 | 143 | 573 | 2.95e-22 | 100 |
| MS.gene58016.t1 | MTR_5g045600 | 26.685 | 371 | 226 | 13 | 113 | 451 | 245 | 601 | 9.88e-22 | 98.6 |
| MS.gene58016.t1 | MTR_3g074970 | 25.282 | 443 | 246 | 15 | 42 | 451 | 119 | 509 | 2.04e-21 | 97.1 |
| MS.gene58016.t1 | MTR_4g082940 | 22.864 | 433 | 268 | 18 | 55 | 438 | 144 | 559 | 5.30e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58016.t1 | AT5G34850 | 78.049 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 0.0 | 754 |
| MS.gene58016.t1 | AT2G27190 | 59.603 | 453 | 177 | 3 | 1 | 451 | 9 | 457 | 0.0 | 550 |
| MS.gene58016.t1 | AT2G16430 | 57.399 | 446 | 187 | 2 | 8 | 451 | 12 | 456 | 0.0 | 532 |
| MS.gene58016.t1 | AT4G36350 | 55.677 | 458 | 188 | 7 | 1 | 451 | 3 | 452 | 1.77e-177 | 505 |
| MS.gene58016.t1 | AT1G56360 | 55.044 | 456 | 192 | 7 | 5 | 451 | 1 | 452 | 2.45e-177 | 504 |
| MS.gene58016.t1 | AT2G18130 | 51.542 | 454 | 190 | 7 | 5 | 451 | 3 | 433 | 7.70e-151 | 436 |
| MS.gene58016.t1 | AT2G16430 | 61.027 | 331 | 126 | 2 | 123 | 451 | 7 | 336 | 1.80e-148 | 427 |
| MS.gene58016.t1 | AT3G46120 | 44.760 | 458 | 162 | 13 | 5 | 451 | 3 | 380 | 4.21e-114 | 340 |
| MS.gene58016.t1 | AT3G20500 | 42.643 | 401 | 203 | 7 | 50 | 449 | 42 | 416 | 2.53e-102 | 312 |
| MS.gene58016.t1 | AT3G52820 | 41.985 | 393 | 204 | 7 | 55 | 447 | 47 | 415 | 5.15e-96 | 296 |
| MS.gene58016.t1 | AT3G52810 | 40.136 | 441 | 226 | 12 | 1 | 436 | 1 | 408 | 1.46e-94 | 292 |
| MS.gene58016.t1 | AT3G52780 | 42.172 | 396 | 203 | 8 | 55 | 447 | 44 | 416 | 3.87e-93 | 288 |
| MS.gene58016.t1 | AT1G52940 | 54.202 | 238 | 103 | 5 | 46 | 279 | 6 | 241 | 1.98e-81 | 251 |
| MS.gene58016.t1 | AT4G13700 | 34.889 | 407 | 210 | 11 | 36 | 401 | 45 | 437 | 7.10e-69 | 226 |
| MS.gene58016.t1 | AT3G07130 | 33.778 | 450 | 216 | 9 | 67 | 450 | 85 | 518 | 8.02e-69 | 228 |
| MS.gene58016.t1 | AT2G32770 | 31.263 | 499 | 239 | 13 | 38 | 448 | 51 | 533 | 1.03e-64 | 218 |
| MS.gene58016.t1 | AT3G52780 | 40.656 | 305 | 166 | 7 | 55 | 356 | 44 | 336 | 5.09e-63 | 208 |
| MS.gene58016.t1 | AT3G07130 | 31.356 | 472 | 231 | 9 | 67 | 450 | 85 | 551 | 1.13e-62 | 213 |
| MS.gene58016.t1 | AT4G13700 | 33.148 | 359 | 196 | 9 | 36 | 353 | 45 | 400 | 1.31e-56 | 193 |
| MS.gene58016.t1 | AT2G32770 | 32.454 | 379 | 179 | 7 | 107 | 421 | 62 | 427 | 2.32e-54 | 187 |
| MS.gene58016.t1 | AT2G32770 | 28.858 | 499 | 222 | 14 | 38 | 448 | 51 | 504 | 1.78e-51 | 182 |
| MS.gene58016.t1 | AT1G13750 | 26.455 | 378 | 232 | 13 | 106 | 451 | 232 | 595 | 1.21e-23 | 104 |
| MS.gene58016.t1 | AT5G50400 | 25.000 | 488 | 304 | 17 | 5 | 451 | 55 | 521 | 2.15e-23 | 103 |
| MS.gene58016.t1 | AT5G50400 | 26.596 | 376 | 234 | 13 | 106 | 451 | 230 | 593 | 2.20e-23 | 103 |
| MS.gene58016.t1 | AT4G24890 | 25.543 | 368 | 234 | 13 | 113 | 451 | 241 | 597 | 1.10e-20 | 95.5 |
| MS.gene58016.t1 | AT1G13900 | 26.804 | 388 | 212 | 18 | 103 | 438 | 203 | 570 | 1.31e-20 | 95.1 |
| MS.gene58016.t1 | AT2G03450 | 25.166 | 453 | 249 | 21 | 53 | 438 | 141 | 570 | 1.14e-18 | 89.4 |
Find 119 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATATACCACTCCTTATT+TGG | 0.124320 | 8.3:+10713507 | MS.gene58016:CDS |
| CCAGATGCCACCTACAAATT+TGG | 0.149906 | 8.3:+10712559 | MS.gene58016:CDS |
| CAGTAATGAAGCTCACTTTA+TGG | 0.198207 | 8.3:+10714571 | MS.gene58016:CDS |
| CGGTTTCAAATTACACTTTC+GGG | 0.223069 | 8.3:+10712202 | MS.gene58016:CDS |
| GTGATTCTTCTCGAGAATTT+TGG | 0.264384 | 8.3:+10712512 | MS.gene58016:CDS |
| TGACTGGACCCTGGTTCATC+TGG | 0.265537 | 8.3:-10712129 | None:intergenic |
| TGTTATGTTGTAATCTATAT+TGG | 0.270249 | 8.3:-10714853 | None:intergenic |
| GCTCAAACTGTTCTATTTGT+TGG | 0.306088 | 8.3:+10712818 | MS.gene58016:CDS |
| TTATTGGTCGTGAAGGTTTA+GGG | 0.329889 | 8.3:+10715048 | MS.gene58016:intron |
| TCACGAAATGCAGAGTATTC+TGG | 0.330065 | 8.3:-10715079 | None:intergenic |
| ACTAAATACTACTACAGAAT+TGG | 0.331165 | 8.3:+10712484 | MS.gene58016:CDS |
| GTACTCTTGGACGCCAAATA+AGG | 0.334148 | 8.3:-10713520 | None:intergenic |
| ACCTACAAATTTGGGATCAT+TGG | 0.339885 | 8.3:+10712568 | MS.gene58016:CDS |
| ATGAGCTGCCACAGGTTGAT+AGG | 0.342674 | 8.3:+10714501 | MS.gene58016:CDS |
| GTGGCATCTGGTCCAACTTT+AGG | 0.343540 | 8.3:-10712547 | None:intergenic |
| TATCTACATTTCAGGTGATC+TGG | 0.362894 | 8.3:+10712745 | MS.gene58016:intron |
| ATCAAGAAGGTCTTGCTTCT+AGG | 0.366011 | 8.3:+10714943 | MS.gene58016:CDS |
| CAGCGTATCAGCCATGGATA+TGG | 0.377763 | 8.3:+10712924 | MS.gene58016:CDS |
| AAGGTTGATGTGATCTTTGC+TGG | 0.378443 | 8.3:+10714641 | MS.gene58016:CDS |
| TTATCCAGCTATTCTCCATT+TGG | 0.379906 | 8.3:+10713592 | MS.gene58016:CDS |
| TTGGTTTGCGGTGGGATACA+TGG | 0.381344 | 8.3:+10712879 | MS.gene58016:CDS |
| GACTGGACCCTGGTTCATCT+GGG | 0.388808 | 8.3:-10712128 | None:intergenic |
| ATTCATCATTGTCTTGTTGA+AGG | 0.390644 | 8.3:+10712243 | MS.gene58016:CDS |
| CCAAATTTGTAGGTGGCATC+TGG | 0.391166 | 8.3:-10712559 | None:intergenic |
| CAGATGCCACCTACAAATTT+GGG | 0.397664 | 8.3:+10712560 | MS.gene58016:CDS |
| TGAAGTGAACCTACCAATAC+TGG | 0.408402 | 8.3:-10715216 | None:intergenic |
| GGGTCCAGTCATGTACAATT+TGG | 0.411196 | 8.3:+10712141 | MS.gene58016:CDS |
| GAGATCTTTCTTATGCTGAT+AGG | 0.430471 | 8.3:+10712840 | MS.gene58016:CDS |
| TGCGAGTGGTTTACGAAAGC+TGG | 0.433609 | 8.3:+10714606 | MS.gene58016:CDS |
| ACGGTTTCAAATTACACTTT+CGG | 0.440557 | 8.3:+10712201 | MS.gene58016:CDS |
| AGTACACACCACAATGGAAA+TGG | 0.441734 | 8.3:+10714471 | MS.gene58016:CDS |
| TCCAGCATTTGCAGTTCCTA+AGG | 0.443867 | 8.3:+10711506 | MS.gene58016:CDS |
| ACCAATGATCCCAAATTTGT+AGG | 0.446529 | 8.3:-10712569 | None:intergenic |
| AAACCATACCGATCTTTCAT+AGG | 0.450195 | 8.3:-10714675 | None:intergenic |
| TTCAGCAGAGATGTGTATGC+AGG | 0.453445 | 8.3:+10711426 | MS.gene58016:CDS |
| CAACGTGGAGTGCCCATAGC+TGG | 0.454170 | 8.3:-10715104 | None:intergenic |
| CCCTTAGGAACTGCAAATGC+TGG | 0.455633 | 8.3:-10711507 | None:intergenic |
| TGAGGTGCATTATGTCCCTT+AGG | 0.458007 | 8.3:-10711522 | None:intergenic |
| ACAACATAACAACTGGTAAC+CGG | 0.458101 | 8.3:+10714865 | MS.gene58016:CDS |
| ATAGATTACAACATAACAAC+TGG | 0.461994 | 8.3:+10714858 | MS.gene58016:CDS |
| GCATTTCGTGAAGCCAGCTA+TGG | 0.469744 | 8.3:+10715091 | MS.gene58016:CDS |
| GTTACCAAATGGAGAATAGC+TGG | 0.473944 | 8.3:-10713596 | None:intergenic |
| CACTGGAACCGCAATGATGA+TGG | 0.473973 | 8.3:+10715157 | MS.gene58016:CDS |
| TTTGAAACACCTCCTAAAGT+TGG | 0.482762 | 8.3:+10712535 | MS.gene58016:CDS |
| ACTTTCGGGGAATACAAGTC+TGG | 0.489018 | 8.3:+10712216 | MS.gene58016:CDS |
| CATGGGCTCGATTTGTTGAA+AGG | 0.490455 | 8.3:+10712897 | MS.gene58016:CDS |
| ATCTACATTTCAGGTGATCT+GGG | 0.492376 | 8.3:+10712746 | MS.gene58016:intron |
| CTCTAGTGCTCTACCATGTA+GGG | 0.493891 | 8.3:-10712977 | None:intergenic |
| CAGCCATGGATATGGAATAC+AGG | 0.494179 | 8.3:+10712932 | MS.gene58016:CDS |
| AGTGGTATATCGTTGAAGAT+AGG | 0.499275 | 8.3:-10713497 | None:intergenic |
| TCTCTAGTGCTCTACCATGT+AGG | 0.502444 | 8.3:-10712978 | None:intergenic |
| ATTTGTCAGCTACGGGATAC+CGG | 0.505552 | 8.3:-10714884 | None:intergenic |
| GAAAAGCAGTAATCATCTCA+TGG | 0.507583 | 8.3:+10712100 | MS.gene58016:CDS |
| TCGTATTGCATAACCAGTAT+TGG | 0.514437 | 8.3:+10715203 | MS.gene58016:CDS |
| GCAAATGCTGGATGATTAAG+TGG | 0.518212 | 8.3:-10711495 | None:intergenic |
| ACGCCTGATTGCATACCAAA+GGG | 0.530829 | 8.3:-10713548 | None:intergenic |
| AATAGAGTACTTTCCCTACA+TGG | 0.530906 | 8.3:+10712964 | MS.gene58016:CDS |
| TAAGAAATACATACTTGTTG+AGG | 0.531408 | 8.3:-10711540 | None:intergenic |
| AGGTGCTGATTTGTCAGCTA+CGG | 0.538709 | 8.3:-10714892 | None:intergenic |
| TTGTCTTGTTGAAGGACTTG+AGG | 0.540359 | 8.3:+10712251 | MS.gene58016:CDS |
| GTGTACATCACGGTCGGAGA+TGG | 0.540371 | 8.3:+10714915 | MS.gene58016:CDS |
| ATCACACAAGGTGATTATGA+TGG | 0.540793 | 8.3:+10712078 | MS.gene58016:CDS |
| TCAATCTACTGCACAAGGCA+CGG | 0.543185 | 8.3:+10712182 | MS.gene58016:CDS |
| TCTCTGAGCCATTTCCATTG+TGG | 0.544206 | 8.3:-10714479 | None:intergenic |
| TGAGCTGCCACAGGTTGATA+GGG | 0.547830 | 8.3:+10714502 | MS.gene58016:CDS |
| GGTGCTGATTTGTCAGCTAC+GGG | 0.549793 | 8.3:-10714891 | None:intergenic |
| CAATGATGATGGCAAGAAAG+TGG | 0.559117 | 8.3:+10715168 | MS.gene58016:CDS |
| CATTTCGTGAAGCCAGCTAT+GGG | 0.559509 | 8.3:+10715092 | MS.gene58016:CDS |
| TTTCCTGTATTCCATATCCA+TGG | 0.562078 | 8.3:-10712935 | None:intergenic |
| CGTTGAAGATAGGACTTGAA+AGG | 0.566750 | 8.3:-10713487 | None:intergenic |
| GAACACATGCTGTCTACCAC+TGG | 0.567046 | 8.3:+10715140 | MS.gene58016:CDS |
| CCAGCATTTGCAGTTCCTAA+GGG | 0.567845 | 8.3:+10711507 | MS.gene58016:CDS |
| CACGCCTGATTGCATACCAA+AGG | 0.568929 | 8.3:-10713549 | None:intergenic |
| GCTCAGAGATGAGCTGCCAC+AGG | 0.569548 | 8.3:+10714493 | MS.gene58016:CDS |
| GCATCTGGTCCAACTTTAGG+AGG | 0.569812 | 8.3:-10712544 | None:intergenic |
| TGGGTGACCCCAGATGAACC+AGG | 0.573846 | 8.3:+10712120 | MS.gene58016:CDS |
| AGTACACTGATGTTGGTTTG+CGG | 0.573861 | 8.3:+10712867 | MS.gene58016:CDS |
| AGGTATCAGTACACTGATGT+TGG | 0.576726 | 8.3:+10712860 | MS.gene58016:CDS |
| GGAGTACAGCGTATCAGCCA+TGG | 0.578522 | 8.3:+10712918 | MS.gene58016:CDS |
| CTCTATATAGTGCTCAAGAG+TGG | 0.578714 | 8.3:-10712789 | None:intergenic |
| TACATCACGGTCGGAGATGG+AGG | 0.579269 | 8.3:+10714918 | MS.gene58016:CDS |
| TCAGCAGAGATGTGTATGCA+GGG | 0.579504 | 8.3:+10711427 | MS.gene58016:CDS |
| CTTTCTTGCCATCATCATTG+CGG | 0.582581 | 8.3:-10715165 | None:intergenic |
| TACTACTACAGAATTGGAAG+TGG | 0.583196 | 8.3:+10712490 | MS.gene58016:CDS |
| AATGCAGAGTATTCTGGCTG+AGG | 0.586901 | 8.3:-10715073 | None:intergenic |
| TGGTTTGCGGTGGGATACAT+GGG | 0.588603 | 8.3:+10712880 | MS.gene58016:CDS |
| CACTGATGTTGGTTTGCGGT+GGG | 0.590870 | 8.3:+10712871 | MS.gene58016:CDS |
| ACTGGACCCTGGTTCATCTG+GGG | 0.591269 | 8.3:-10712127 | None:intergenic |
| TGTGCCAAATTGTACATGAC+TGG | 0.592331 | 8.3:-10712145 | None:intergenic |
| TGTTCATGCCTATGAAAGAT+CGG | 0.594706 | 8.3:+10714667 | MS.gene58016:CDS |
| AAAAGCAGTAATCATCTCAT+GGG | 0.596532 | 8.3:+10712101 | MS.gene58016:CDS |
| TTAAGTGGAATATCAACAGA+TGG | 0.596627 | 8.3:-10711480 | None:intergenic |
| CATCATCATTGCGGTTCCAG+TGG | 0.598630 | 8.3:-10715156 | None:intergenic |
| ATCTTTCATAGGCATGAACA+TGG | 0.603823 | 8.3:-10714664 | None:intergenic |
| AAGAAAATAGAAAGATGCAG+AGG | 0.605085 | 8.3:+10711364 | None:intergenic |
| ACACTGATGTTGGTTTGCGG+TGG | 0.606840 | 8.3:+10712870 | MS.gene58016:CDS |
| AATATCAACAGATGGAAACT+CGG | 0.608614 | 8.3:-10711472 | None:intergenic |
| AATGAAGCTCACTTTATGGA+AGG | 0.608755 | 8.3:+10714575 | MS.gene58016:CDS |
| GCCTGATTGCATACCAAAGG+GGG | 0.618674 | 8.3:-10713546 | None:intergenic |
| AAGCTGGTTCATCAAGTACA+AGG | 0.625171 | 8.3:+10714622 | MS.gene58016:CDS |
| GGTTTCAAATTACACTTTCG+GGG | 0.626128 | 8.3:+10712203 | MS.gene58016:CDS |
| TCTCCGACCGTGATGTACAC+AGG | 0.629591 | 8.3:-10714912 | None:intergenic |
| TGCATGAGAACAATGAGCCA+AGG | 0.630461 | 8.3:-10714533 | None:intergenic |
| GGAGATGGAGGAAATCAAGA+AGG | 0.639359 | 8.3:+10714930 | MS.gene58016:CDS |
| TTGATAGGGAAAAGACACCT+TGG | 0.640827 | 8.3:+10714516 | MS.gene58016:CDS |
| GGAAGGTGAAAGCATGCGAG+TGG | 0.643581 | 8.3:+10714592 | MS.gene58016:CDS |
| AAATTTCAATCTACTGCACA+AGG | 0.649428 | 8.3:+10712177 | MS.gene58016:CDS |
| CAGTAAAGTACACACCACAA+TGG | 0.656235 | 8.3:+10714465 | MS.gene58016:intron |
| CGCCTGATTGCATACCAAAG+GGG | 0.656819 | 8.3:-10713547 | None:intergenic |
| GCACCTGTGTACATCACGGT+CGG | 0.660426 | 8.3:+10714909 | MS.gene58016:CDS |
| CAGCTATGGGCACTCCACGT+TGG | 0.662828 | 8.3:+10715105 | MS.gene58016:CDS |
| ATCAGCACCTGTGTACATCA+CGG | 0.663406 | 8.3:+10714905 | MS.gene58016:CDS |
| AATGATCCCAAATTTGTAGG+TGG | 0.663512 | 8.3:-10712566 | None:intergenic |
| AATTGTACATGACTGGACCC+TGG | 0.667509 | 8.3:-10712138 | None:intergenic |
| CTTGGACGCCAAATAAGGAG+TGG | 0.681481 | 8.3:-10713515 | None:intergenic |
| GGGTGACCCCAGATGAACCA+GGG | 0.686729 | 8.3:+10712121 | MS.gene58016:CDS |
| TTGTAGGTGCATATCACACA+AGG | 0.690964 | 8.3:+10712066 | MS.gene58016:intron |
| GCTTCATTACTGTTGTAGAG+CGG | 0.703187 | 8.3:-10714560 | None:intergenic |
| GTTATGCAATACGAATGAGT+CGG | 0.728481 | 8.3:-10715194 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATATATACTTCAATAAA+AGG | - | chr8.3:10714382-10714401 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGGATTATAAT+AGG | + | chr8.3:10713823-10713842 | MS.gene58016:intron | 15.0% |
| !! | GTATTTAGAAAAAATATGTT+TGG | + | chr8.3:10713774-10713793 | MS.gene58016:intron | 15.0% |
| !! | TATTAATATTTCTTACATGT+TGG | + | chr8.3:10713639-10713658 | MS.gene58016:intron | 15.0% |
| !!! | ATATTCTTTTACATAAACTT+AGG | + | chr8.3:10713671-10713690 | MS.gene58016:intron | 15.0% |
| !!! | TATTATAATCCCTATTTTTA+TGG | - | chr8.3:10713824-10713843 | None:intergenic | 15.0% |
| !!! | TATTCTTTTACATAAACTTA+GGG | + | chr8.3:10713672-10713691 | MS.gene58016:intron | 15.0% |
| !!! | TTGTGTATTTATTTATTTTC+TGG | + | chr8.3:10713007-10713026 | MS.gene58016:intron | 15.0% |
| !! | AAAAAATTTCCCAAAGAAAA+GGG | - | chr8.3:10713896-10713915 | None:intergenic | 20.0% |
| !! | AAGTGAAATAATTTCAAAAG+TGG | + | chr8.3:10712334-10712353 | MS.gene58016:intron | 20.0% |
| !! | AAGTTATATTTGTTTATTCC+TGG | - | chr8.3:10714004-10714023 | None:intergenic | 20.0% |
| !! | AGTTATATTTGTTTATTCCT+GGG | - | chr8.3:10714003-10714022 | None:intergenic | 20.0% |
| !! | ATAAGTGATCAATATTCAAT+AGG | - | chr8.3:10714138-10714157 | None:intergenic | 20.0% |
| !! | ATATATACTTCAATAAAAGG+TGG | - | chr8.3:10714379-10714398 | None:intergenic | 20.0% |
| !! | GTTAACTTTATAATATTCCT+AGG | + | chr8.3:10713796-10713815 | MS.gene58016:intron | 20.0% |
| !! | TAGTAAATTGTAACAAACAT+AGG | + | chr8.3:10713953-10713972 | MS.gene58016:intron | 20.0% |
| !! | TGTTATGTTGTAATCTATAT+TGG | - | chr8.3:10714856-10714875 | None:intergenic | 20.0% |
| !!! | AAATATAAATTTTCTACCAC+TGG | - | chr8.3:10711934-10711953 | None:intergenic | 20.0% |
| !!! | AATTTACTAAATTTTATCCC+CGG | - | chr8.3:10713942-10713961 | None:intergenic | 20.0% |
| !!! | CATATTTTTTCTAAATACCT+TGG | - | chr8.3:10713772-10713791 | None:intergenic | 20.0% |
| !!! | CTAGATACAATTATTCATTT+TGG | - | chr8.3:10712725-10712744 | None:intergenic | 20.0% |
| !!! | TCTAACTTTTATGTTTTAGT+TGG | + | chr8.3:10714080-10714099 | MS.gene58016:intron | 20.0% |
| ! | AAATTATGATGTTATGCCTA+TGG | + | chr8.3:10711891-10711910 | MS.gene58016:intron | 25.0% |
| ! | AAGTACATTCTTATGTTTGT+AGG | + | chr8.3:10714271-10714290 | MS.gene58016:intron | 25.0% |
| ! | ACACTAATGTGATAAAATCT+TGG | - | chr8.3:10712012-10712031 | None:intergenic | 25.0% |
| ! | ACAGCTTATATGTTTATAAG+CGG | + | chr8.3:10711627-10711646 | MS.gene58016:intron | 25.0% |
| ! | ACTAAATACTACTACAGAAT+TGG | + | chr8.3:10712484-10712503 | MS.gene58016:CDS | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr8.3:10713708-10713727 | MS.gene58016:intron | 25.0% |
| ! | ATAGATTACAACATAACAAC+TGG | + | chr8.3:10714858-10714877 | MS.gene58016:CDS | 25.0% |
| ! | ATTCCTTGGAATATAAAGAT+GGG | + | chr8.3:10713737-10713756 | MS.gene58016:intron | 25.0% |
| ! | GAAAAAATTTCCCAAAGAAA+AGG | - | chr8.3:10713897-10713916 | None:intergenic | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | - | chr8.3:10713717-10713736 | None:intergenic | 25.0% |
| ! | TAACTTAATTCTGTTACAGA+TGG | + | chr8.3:10714966-10714985 | MS.gene58016:intron | 25.0% |
| ! | TAATGAATCTTTGATTCATC+AGG | + | chr8.3:10711582-10711601 | MS.gene58016:intron | 25.0% |
| ! | TACTAAAAGAAACTTCACAA+AGG | - | chr8.3:10713350-10713369 | None:intergenic | 25.0% |
| ! | TGTGTAACCTATAATAGAAA+GGG | - | chr8.3:10713417-10713436 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAATATCTTCT+AGG | - | chr8.3:10711854-10711873 | None:intergenic | 25.0% |
| !! | AGTTTCAGTTTTCACATTTT+TGG | + | chr8.3:10713057-10713076 | MS.gene58016:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8.3:10711827-10711846 | MS.gene58016:intron | 25.0% |
| !! | ATTTACTAAATTTTATCCCC+GGG | - | chr8.3:10713941-10713960 | None:intergenic | 25.0% |
| !! | ATTTCTATCATTTTATTCCC+AGG | + | chr8.3:10713983-10714002 | MS.gene58016:intron | 25.0% |
| !! | TAAGAAATACATACTTGTTG+AGG | - | chr8.3:10711543-10711562 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8.3:10711828-10711847 | MS.gene58016:intron | 25.0% |
| !!! | ATTGTTTTTCATGTAACCAT+AGG | - | chr8.3:10711910-10711929 | None:intergenic | 25.0% |
| AAAAGCAGTAATCATCTCAT+GGG | + | chr8.3:10712101-10712120 | MS.gene58016:CDS | 30.0% | |
| AAATGTGAAAACTGAAACTG+TGG | - | chr8.3:10713056-10713075 | None:intergenic | 30.0% | |
| AAATTCCAACGGAATGAAAA+CGG | - | chr8.3:10713244-10713263 | None:intergenic | 30.0% | |
| AAATTTCAATCTACTGCACA+AGG | + | chr8.3:10712177-10712196 | MS.gene58016:CDS | 30.0% | |
| AACACAAAGAAAAATGCGAA+CGG | - | chr8.3:10712416-10712435 | None:intergenic | 30.0% | |
| AACGATGAAAAAGATTATGC+AGG | - | chr8.3:10712609-10712628 | None:intergenic | 30.0% | |
| AAGCAAAAAGAAATCCTCAT+AGG | - | chr8.3:10712671-10712690 | None:intergenic | 30.0% | |
| AATATCAACAGATGGAAACT+CGG | - | chr8.3:10711475-10711494 | None:intergenic | 30.0% | |
| AATATTCAATAGGACGTCAA+AGG | - | chr8.3:10714128-10714147 | None:intergenic | 30.0% | |
| AATGATATGCTAAGAACCTA+GGG | - | chr8.3:10714039-10714058 | None:intergenic | 30.0% | |
| ACAAAACTACAGGAATAGAA+AGG | - | chr8.3:10713215-10713234 | None:intergenic | 30.0% | |
| ACGATGAAAAAGATTATGCA+GGG | - | chr8.3:10712608-10712627 | None:intergenic | 30.0% | |
| ACGGTTTCAAATTACACTTT+CGG | + | chr8.3:10712201-10712220 | MS.gene58016:CDS | 30.0% | |
| ATTCCCATCTTTATATTCCA+AGG | - | chr8.3:10713743-10713762 | None:intergenic | 30.0% | |
| CATTCCTTGGAATATAAAGA+TGG | + | chr8.3:10713736-10713755 | MS.gene58016:intron | 30.0% | |
| GATATAAATCTGCTTGATCA+GGG | + | chr8.3:10713454-10713473 | MS.gene58016:intron | 30.0% | |
| GTATCTAGTATCTACATTTC+AGG | + | chr8.3:10712737-10712756 | MS.gene58016:intron | 30.0% | |
| GTGTGTAACCTATAATAGAA+AGG | - | chr8.3:10713418-10713437 | None:intergenic | 30.0% | |
| TACATGAAAAACAATTCCAG+TGG | + | chr8.3:10711915-10711934 | MS.gene58016:intron | 30.0% | |
| TCATGCATAATACAGAGAAA+AGG | - | chr8.3:10713149-10713168 | None:intergenic | 30.0% | |
| TCCTAGGAACCATAAAAATA+GGG | + | chr8.3:10713812-10713831 | MS.gene58016:intron | 30.0% | |
| TCTTATGTTTGTAGGTCTAA+AGG | + | chr8.3:10714279-10714298 | MS.gene58016:intron | 30.0% | |
| TGAGGTAATTGTTTCAGATA+AGG | + | chr8.3:10712269-10712288 | MS.gene58016:intron | 30.0% | |
| TGATATAAATCTGCTTGATC+AGG | + | chr8.3:10713453-10713472 | MS.gene58016:intron | 30.0% | |
| TTAAGTGGAATATCAACAGA+TGG | - | chr8.3:10711483-10711502 | None:intergenic | 30.0% | |
| TTCCTAGGAACCATAAAAAT+AGG | + | chr8.3:10713811-10713830 | MS.gene58016:intron | 30.0% | |
| TTCTTCTTAACTACTATGTC+TGG | + | chr8.3:10713112-10713131 | MS.gene58016:intron | 30.0% | |
| ! | AAGATGGGAATTTTATTCCA+AGG | + | chr8.3:10713752-10713771 | MS.gene58016:intron | 30.0% |
| ! | ATTCATCATTGTCTTGTTGA+AGG | + | chr8.3:10712243-10712262 | MS.gene58016:CDS | 30.0% |
| ! | TAGCACTTTTGCTTGTATAT+GGG | - | chr8.3:10714184-10714203 | None:intergenic | 30.0% |
| ! | TGTTTTCATAGATGAAGCAT+AGG | - | chr8.3:10711610-10711629 | None:intergenic | 30.0% |
| ! | TTAGCACTTTTGCTTGTATA+TGG | - | chr8.3:10714185-10714204 | None:intergenic | 30.0% |
| !! | GCAGCGATTTATTATTTTAC+TGG | - | chr8.3:10713034-10713053 | None:intergenic | 30.0% |
| !! | GTCTCATGATTTTAATGATG+TGG | + | chr8.3:10712695-10712714 | MS.gene58016:intron | 30.0% |
| !! | GTGTTGTTTATTTCCATTGT+AGG | + | chr8.3:10712050-10712069 | MS.gene58016:intron | 30.0% |
| !! | TACATAAAGTATTGCCTATG+AGG | + | chr8.3:10712654-10712673 | MS.gene58016:intron | 30.0% |
| !!! | AGTTTTCACATTTTTGGCAT+TGG | + | chr8.3:10713063-10713082 | MS.gene58016:intron | 30.0% |
| !!! | GCACGTTTTAATTCTGTTAT+TGG | + | chr8.3:10715032-10715051 | MS.gene58016:intron | 30.0% |
| !!! | TCTATTTTTTATCTCCAACG+TGG | - | chr8.3:10715122-10715141 | None:intergenic | 30.0% |
| AAACCATACCGATCTTTCAT+AGG | - | chr8.3:10714678-10714697 | None:intergenic | 35.0% | |
| AAATTTCCCAAAGAAAAGGG+TGG | - | chr8.3:10713893-10713912 | None:intergenic | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr8.3:10713869-10713888 | None:intergenic | 35.0% | |
| AATGAAGCTCACTTTATGGA+AGG | + | chr8.3:10714575-10714594 | MS.gene58016:CDS | 35.0% | |
| AATGATCCCAAATTTGTAGG+TGG | - | chr8.3:10712569-10712588 | None:intergenic | 35.0% | |
| AATTCTGTTATTGGTCGTGA+AGG | + | chr8.3:10715041-10715060 | MS.gene58016:intron | 35.0% | |
| ACAACATAACAACTGGTAAC+CGG | + | chr8.3:10714865-10714884 | MS.gene58016:CDS | 35.0% | |
| ACCAATGATCCCAAATTTGT+AGG | - | chr8.3:10712572-10712591 | None:intergenic | 35.0% | |
| ACGATATACCACTCCTTATT+TGG | + | chr8.3:10713507-10713526 | MS.gene58016:CDS | 35.0% | |
| AGATGTTTACTTCTCTACCT+TGG | + | chr8.3:10714210-10714229 | MS.gene58016:intron | 35.0% | |
| AGTGGTATATCGTTGAAGAT+AGG | - | chr8.3:10713500-10713519 | None:intergenic | 35.0% | |
| ATCACACAAGGTGATTATGA+TGG | + | chr8.3:10712078-10712097 | MS.gene58016:CDS | 35.0% | |
| ATCTCTGCTGAAAAACACAA+AGG | - | chr8.3:10711418-10711437 | None:intergenic | 35.0% | |
| ATCTTTCATAGGCATGAACA+TGG | - | chr8.3:10714667-10714686 | None:intergenic | 35.0% | |
| ATGTTTACTTCTCTACCTTG+GGG | + | chr8.3:10714212-10714231 | MS.gene58016:intron | 35.0% | |
| CAATGATATGCTAAGAACCT+AGG | - | chr8.3:10714040-10714059 | None:intergenic | 35.0% | |
| CAGTAATGAAGCTCACTTTA+TGG | + | chr8.3:10714571-10714590 | MS.gene58016:CDS | 35.0% | |
| CGGTTTCAAATTACACTTTC+GGG | + | chr8.3:10712202-10712221 | MS.gene58016:CDS | 35.0% | |
| CTAGGTTCTTAGCATATCAT+TGG | + | chr8.3:10714038-10714057 | MS.gene58016:intron | 35.0% | |
| CTTCACACCCTTTCTATTAT+AGG | + | chr8.3:10713407-10713426 | MS.gene58016:intron | 35.0% | |
| CTTCAGCATAACATATGAAG+CGG | - | chr8.3:10713294-10713313 | None:intergenic | 35.0% | |
| GAAAAGCAGTAATCATCTCA+TGG | + | chr8.3:10712100-10712119 | MS.gene58016:CDS | 35.0% | |
| GAATTTATTCCCATCTCCAT+GGG | + | chr8.3:10713857-10713876 | MS.gene58016:intron | 35.0% | |
| GAGAAATGTGTATGCAATAG+TGG | + | chr8.3:10711868-10711887 | MS.gene58016:intron | 35.0% | |
| GAGAGTAGAATTATCATCAC+TGG | + | chr8.3:10712291-10712310 | MS.gene58016:intron | 35.0% | |
| GAGATCTTTCTTATGCTGAT+AGG | + | chr8.3:10712840-10712859 | MS.gene58016:CDS | 35.0% | |
| GATGTTTACTTCTCTACCTT+GGG | + | chr8.3:10714211-10714230 | MS.gene58016:intron | 35.0% | |
| GCTCAAACTGTTCTATTTGT+TGG | + | chr8.3:10712818-10712837 | MS.gene58016:CDS | 35.0% | |
| GGTTTCAAATTACACTTTCG+GGG | + | chr8.3:10712203-10712222 | MS.gene58016:CDS | 35.0% | |
| GTTATGCAATACGAATGAGT+CGG | - | chr8.3:10715197-10715216 | None:intergenic | 35.0% | |
| TACTACTACAGAATTGGAAG+TGG | + | chr8.3:10712490-10712509 | MS.gene58016:CDS | 35.0% | |
| TGAATTTATTCCCATCTCCA+TGG | + | chr8.3:10713856-10713875 | MS.gene58016:intron | 35.0% | |
| TGTTCATGCCTATGAAAGAT+CGG | + | chr8.3:10714667-10714686 | MS.gene58016:CDS | 35.0% | |
| TTATCCAGCTATTCTCCATT+TGG | + | chr8.3:10713592-10713611 | MS.gene58016:CDS | 35.0% | |
| TTATTGGTCGTGAAGGTTTA+GGG | + | chr8.3:10715048-10715067 | MS.gene58016:intron | 35.0% | |
| TTCAGCATAACATATGAAGC+GGG | - | chr8.3:10713293-10713312 | None:intergenic | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | - | chr8.3:10713728-10713747 | None:intergenic | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | + | chr8.3:10713723-10713742 | MS.gene58016:intron | 35.0% | |
| TTTCCTGTATTCCATATCCA+TGG | - | chr8.3:10712938-10712957 | None:intergenic | 35.0% | |
| ! | AATAGAGTACTTTCCCTACA+TGG | + | chr8.3:10712964-10712983 | MS.gene58016:CDS | 35.0% |
| ! | ACCTACAAATTTGGGATCAT+TGG | + | chr8.3:10712568-10712587 | MS.gene58016:CDS | 35.0% |
| ! | ACGGTTTTCTACAAAACTAC+AGG | - | chr8.3:10713225-10713244 | None:intergenic | 35.0% |
| ! | AGAGCAGATTAGTTACCAAA+TGG | - | chr8.3:10713610-10713629 | None:intergenic | 35.0% |
| ! | AGCACTTTTGCTTGTATATG+GGG | - | chr8.3:10714183-10714202 | None:intergenic | 35.0% |
| ! | ATCTACATTTCAGGTGATCT+GGG | + | chr8.3:10712746-10712765 | MS.gene58016:intron | 35.0% |
| ! | GTGATTCTTCTCGAGAATTT+TGG | + | chr8.3:10712512-10712531 | MS.gene58016:CDS | 35.0% |
| ! | TATCTACATTTCAGGTGATC+TGG | + | chr8.3:10712745-10712764 | MS.gene58016:intron | 35.0% |
| ! | TTATTGCCACCCTTTTCTTT+GGG | + | chr8.3:10713884-10713903 | MS.gene58016:intron | 35.0% |
| ! | TTTATTGCCACCCTTTTCTT+TGG | + | chr8.3:10713883-10713902 | MS.gene58016:intron | 35.0% |
| ! | TTTGAAACACCTCCTAAAGT+TGG | + | chr8.3:10712535-10712554 | MS.gene58016:CDS | 35.0% |
| !!! | GGGAAATTTTTTCTATTCCC+AGG | + | chr8.3:10713904-10713923 | MS.gene58016:intron | 35.0% |
| !!! | TCCCTATTTTTATGGTTCCT+AGG | - | chr8.3:10713816-10713835 | None:intergenic | 35.0% |
| AAGTATGCTGTCATGTGCAA+TGG | - | chr8.3:10713172-10713191 | None:intergenic | 40.0% | |
| AATATCTTCTAGGCCCTGTT+TGG | - | chr8.3:10711844-10711863 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr8.3:10714020-10714039 | MS.gene58016:intron | 40.0% | |
| AGGTATCAGTACACTGATGT+TGG | + | chr8.3:10712860-10712879 | MS.gene58016:CDS | 40.0% | |
| AGTACACACCACAATGGAAA+TGG | + | chr8.3:10714471-10714490 | MS.gene58016:CDS | 40.0% | |
| ATCAAGAAGGTCTTGCTTCT+AGG | + | chr8.3:10714943-10714962 | MS.gene58016:CDS | 40.0% | |
| ATGCCTATGAAAGATCGGTA+TGG | + | chr8.3:10714672-10714691 | MS.gene58016:intron | 40.0% | |
| CAATAAAGTTCCCATGGAGA+TGG | - | chr8.3:10713870-10713889 | None:intergenic | 40.0% | |
| CAGATGCCACCTACAAATTT+GGG | + | chr8.3:10712560-10712579 | MS.gene58016:CDS | 40.0% | |
| CAGTAAAGTACACACCACAA+TGG | + | chr8.3:10714465-10714484 | MS.gene58016:intron | 40.0% | |
| CGTTGAAGATAGGACTTGAA+AGG | - | chr8.3:10713490-10713509 | None:intergenic | 40.0% | |
| CTCTATATAGTGCTCAAGAG+TGG | - | chr8.3:10712792-10712811 | None:intergenic | 40.0% | |
| CTTTCTTGCCATCATCATTG+CGG | - | chr8.3:10715168-10715187 | None:intergenic | 40.0% | |
| GCAAATGCTGGATGATTAAG+TGG | - | chr8.3:10711498-10711517 | None:intergenic | 40.0% | |
| GCACACATAAGAATCCACTA+CGG | - | chr8.3:10714801-10714820 | None:intergenic | 40.0% | |
| GCCTGCTAACAAAATTCCAA+CGG | - | chr8.3:10713255-10713274 | None:intergenic | 40.0% | |
| GCTTCATTACTGTTGTAGAG+CGG | - | chr8.3:10714563-10714582 | None:intergenic | 40.0% | |
| GTTACCAAATGGAGAATAGC+TGG | - | chr8.3:10713599-10713618 | None:intergenic | 40.0% | |
| GTTATTGGTCGTGAAGGTTT+AGG | + | chr8.3:10715047-10715066 | MS.gene58016:intron | 40.0% | |
| TCAGCATAACATATGAAGCG+GGG | - | chr8.3:10713292-10713311 | None:intergenic | 40.0% | |
| TGTGCCAAATTGTACATGAC+TGG | - | chr8.3:10712148-10712167 | None:intergenic | 40.0% | |
| TGTGTGATATGCACCTACAA+TGG | - | chr8.3:10712066-10712085 | None:intergenic | 40.0% | |
| TTGATAGGGAAAAGACACCT+TGG | + | chr8.3:10714516-10714535 | MS.gene58016:CDS | 40.0% | |
| TTGTAGGTGCATATCACACA+AGG | + | chr8.3:10712066-10712085 | MS.gene58016:intron | 40.0% | |
| ! | AAGCTGGTTCATCAAGTACA+AGG | + | chr8.3:10714622-10714641 | MS.gene58016:CDS | 40.0% |
| ! | AGGGTGTGAAGTTTTCAACA+CGG | - | chr8.3:10713398-10713417 | None:intergenic | 40.0% |
| ! | GAAAACCGTTTTCATTCCGT+TGG | + | chr8.3:10713236-10713255 | MS.gene58016:intron | 40.0% |
| ! | TCACGAAATGCAGAGTATTC+TGG | - | chr8.3:10715082-10715101 | None:intergenic | 40.0% |
| ! | TCATTCCCTGCTCATGTTTT+GGG | + | chr8.3:10714698-10714717 | MS.gene58016:intron | 40.0% |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr8.3:10713920-10713939 | MS.gene58016:intron | 40.0% |
| ! | TCCGTTGGAATTTTGTTAGC+AGG | + | chr8.3:10713251-10713270 | MS.gene58016:intron | 40.0% |
| ! | TTCATTCCCTGCTCATGTTT+TGG | + | chr8.3:10714697-10714716 | MS.gene58016:intron | 40.0% |
| ! | TTGTCTTGTTGAAGGACTTG+AGG | + | chr8.3:10712251-10712270 | MS.gene58016:CDS | 40.0% |
| !! | AAGGTTGATGTGATCTTTGC+TGG | + | chr8.3:10714641-10714660 | MS.gene58016:CDS | 40.0% |
| !! | AGTACACTGATGTTGGTTTG+CGG | + | chr8.3:10712867-10712886 | MS.gene58016:CDS | 40.0% |
| !! | CAATGATGATGGCAAGAAAG+TGG | + | chr8.3:10715168-10715187 | MS.gene58016:CDS | 40.0% |
| !! | CATGGAGTTGCATGCTATTT+TGG | + | chr8.3:10714734-10714753 | MS.gene58016:intron | 40.0% |
| AATTGTACATGACTGGACCC+TGG | - | chr8.3:10712141-10712160 | None:intergenic | 45.0% | |
| ACGCCTGATTGCATACCAAA+GGG | - | chr8.3:10713551-10713570 | None:intergenic | 45.0% | |
| ACTTTCGGGGAATACAAGTC+TGG | + | chr8.3:10712216-10712235 | MS.gene58016:CDS | 45.0% | |
| AGGAACCCAAAACATGAGCA+GGG | - | chr8.3:10714706-10714725 | None:intergenic | 45.0% | |
| ATCAGCACCTGTGTACATCA+CGG | + | chr8.3:10714905-10714924 | MS.gene58016:CDS | 45.0% | |
| ATTTGTCAGCTACGGGATAC+CGG | - | chr8.3:10714887-10714906 | None:intergenic | 45.0% | |
| CAGCCATGGATATGGAATAC+AGG | + | chr8.3:10712932-10712951 | MS.gene58016:CDS | 45.0% | |
| CATTTCGTGAAGCCAGCTAT+GGG | + | chr8.3:10715092-10715111 | MS.gene58016:CDS | 45.0% | |
| CCAAATTTGTAGGTGGCATC+TGG | - | chr8.3:10712562-10712581 | None:intergenic | 45.0% | |
| CCAGATGCCACCTACAAATT+TGG | + | chr8.3:10712559-10712578 | MS.gene58016:CDS | 45.0% | |
| CCAGCATTTGCAGTTCCTAA+GGG | + | chr8.3:10711507-10711526 | MS.gene58016:CDS | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr8.3:10713924-10713943 | None:intergenic | 45.0% | |
| CTCTAGTGCTCTACCATGTA+GGG | - | chr8.3:10712980-10712999 | None:intergenic | 45.0% | |
| GGAGAATCGATACTGAAAGC+AGG | - | chr8.3:10714835-10714854 | None:intergenic | 45.0% | |
| GGAGATGGAGGAAATCAAGA+AGG | + | chr8.3:10714930-10714949 | MS.gene58016:CDS | 45.0% | |
| GGGTCCAGTCATGTACAATT+TGG | + | chr8.3:10712141-10712160 | MS.gene58016:CDS | 45.0% | |
| GTACTCTTGGACGCCAAATA+AGG | - | chr8.3:10713523-10713542 | None:intergenic | 45.0% | |
| TCAATCTACTGCACAAGGCA+CGG | + | chr8.3:10712182-10712201 | MS.gene58016:CDS | 45.0% | |
| TCAGCAGAGATGTGTATGCA+GGG | + | chr8.3:10711427-10711446 | MS.gene58016:CDS | 45.0% | |
| TCCAGCATTTGCAGTTCCTA+AGG | + | chr8.3:10711506-10711525 | MS.gene58016:CDS | 45.0% | |
| TCTCTAGTGCTCTACCATGT+AGG | - | chr8.3:10712981-10713000 | None:intergenic | 45.0% | |
| TCTCTGAGCCATTTCCATTG+TGG | - | chr8.3:10714482-10714501 | None:intergenic | 45.0% | |
| TGAGGTGCATTATGTCCCTT+AGG | - | chr8.3:10711525-10711544 | None:intergenic | 45.0% | |
| TGCAACTCCATGTATTGTGC+AGG | - | chr8.3:10714726-10714745 | None:intergenic | 45.0% | |
| TGCATGAGAACAATGAGCCA+AGG | - | chr8.3:10714536-10714555 | None:intergenic | 45.0% | |
| TTAGTCATGTGATGCCGTAG+TGG | + | chr8.3:10714784-10714803 | MS.gene58016:intron | 45.0% | |
| TTCAGCAGAGATGTGTATGC+AGG | + | chr8.3:10711426-10711445 | MS.gene58016:CDS | 45.0% | |
| TTGGGTTCCTGCACAATACA+TGG | + | chr8.3:10714716-10714735 | MS.gene58016:intron | 45.0% | |
| ! | AATGCAGAGTATTCTGGCTG+AGG | - | chr8.3:10715076-10715095 | None:intergenic | 45.0% |
| ! | CCAGGAACATTTTATACCCG+GGG | + | chr8.3:10713922-10713941 | MS.gene58016:intron | 45.0% |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr8.3:10713921-10713940 | MS.gene58016:intron | 45.0% |
| ! | GGGTGTGAAGTTTTCAACAC+GGG | - | chr8.3:10713397-10713416 | None:intergenic | 45.0% |
| ! | GTCTTTTCCCTATCAACCTG+TGG | - | chr8.3:10714512-10714531 | None:intergenic | 45.0% |
| !! | AGGTGCTGATTTGTCAGCTA+CGG | - | chr8.3:10714895-10714914 | None:intergenic | 45.0% |
| !! | CATGGGCTCGATTTGTTGAA+AGG | + | chr8.3:10712897-10712916 | MS.gene58016:CDS | 45.0% |
| CACGCCTGATTGCATACCAA+AGG | - | chr8.3:10713552-10713571 | None:intergenic | 50.0% | |
| CACTGGAACCGCAATGATGA+TGG | + | chr8.3:10715157-10715176 | MS.gene58016:CDS | 50.0% | |
| CAGCGTATCAGCCATGGATA+TGG | + | chr8.3:10712924-10712943 | MS.gene58016:CDS | 50.0% | |
| CAGGAACCCAAAACATGAGC+AGG | - | chr8.3:10714707-10714726 | None:intergenic | 50.0% | |
| CATCATCATTGCGGTTCCAG+TGG | - | chr8.3:10715159-10715178 | None:intergenic | 50.0% | |
| CCCCGGGTATAAAATGTTCC+TGG | - | chr8.3:10713925-10713944 | None:intergenic | 50.0% | |
| CCCTTAGGAACTGCAAATGC+TGG | - | chr8.3:10711510-10711529 | None:intergenic | 50.0% | |
| CGCCTGATTGCATACCAAAG+GGG | - | chr8.3:10713550-10713569 | None:intergenic | 50.0% | |
| CTTGGACGCCAAATAAGGAG+TGG | - | chr8.3:10713518-10713537 | None:intergenic | 50.0% | |
| GAACACATGCTGTCTACCAC+TGG | + | chr8.3:10715140-10715159 | MS.gene58016:CDS | 50.0% | |
| GCATCTGGTCCAACTTTAGG+AGG | - | chr8.3:10712547-10712566 | None:intergenic | 50.0% | |
| GCATTTCGTGAAGCCAGCTA+TGG | + | chr8.3:10715091-10715110 | MS.gene58016:CDS | 50.0% | |
| GCCTGATTGCATACCAAAGG+GGG | - | chr8.3:10713549-10713568 | None:intergenic | 50.0% | |
| GGGTGGCAATAAAGTTCCCA+TGG | - | chr8.3:10713876-10713895 | None:intergenic | 50.0% | |
| GTGGCATCTGGTCCAACTTT+AGG | - | chr8.3:10712550-10712569 | None:intergenic | 50.0% | |
| TGCGAGTGGTTTACGAAAGC+TGG | + | chr8.3:10714606-10714625 | MS.gene58016:CDS | 50.0% | |
| ! | TGGTTTGCGGTGGGATACAT+GGG | + | chr8.3:10712880-10712899 | MS.gene58016:CDS | 50.0% |
| !! | ACACTGATGTTGGTTTGCGG+TGG | + | chr8.3:10712870-10712889 | MS.gene58016:CDS | 50.0% |
| !! | ATGAGCTGCCACAGGTTGAT+AGG | + | chr8.3:10714501-10714520 | MS.gene58016:CDS | 50.0% |
| !! | CACTGATGTTGGTTTGCGGT+GGG | + | chr8.3:10712871-10712890 | MS.gene58016:CDS | 50.0% |
| !! | GGTGCTGATTTGTCAGCTAC+GGG | - | chr8.3:10714894-10714913 | None:intergenic | 50.0% |
| !! | TGAGCTGCCACAGGTTGATA+GGG | + | chr8.3:10714502-10714521 | MS.gene58016:CDS | 50.0% |
| !! | TTGGTTTGCGGTGGGATACA+TGG | + | chr8.3:10712879-10712898 | MS.gene58016:CDS | 50.0% |
| ACTGGACCCTGGTTCATCTG+GGG | - | chr8.3:10712130-10712149 | None:intergenic | 55.0% | |
| AGTCTAGCACTTGCTCCCCA+AGG | - | chr8.3:10714230-10714249 | None:intergenic | 55.0% | |
| GACTGGACCCTGGTTCATCT+GGG | - | chr8.3:10712131-10712150 | None:intergenic | 55.0% | |
| GATTGCATACCAAAGGGGGC+TGG | - | chr8.3:10713545-10713564 | None:intergenic | 55.0% | |
| GCACCTGTGTACATCACGGT+CGG | + | chr8.3:10714909-10714928 | MS.gene58016:CDS | 55.0% | |
| GCCCCCTTTGGTATGCAATC+AGG | + | chr8.3:10713545-10713564 | MS.gene58016:CDS | 55.0% | |
| GGAGTACAGCGTATCAGCCA+TGG | + | chr8.3:10712918-10712937 | MS.gene58016:CDS | 55.0% | |
| GTGTACATCACGGTCGGAGA+TGG | + | chr8.3:10714915-10714934 | MS.gene58016:CDS | 55.0% | |
| TACATCACGGTCGGAGATGG+AGG | + | chr8.3:10714918-10714937 | MS.gene58016:CDS | 55.0% | |
| TCTCCGACCGTGATGTACAC+AGG | - | chr8.3:10714915-10714934 | None:intergenic | 55.0% | |
| TGACTGGACCCTGGTTCATC+TGG | - | chr8.3:10712132-10712151 | None:intergenic | 55.0% | |
| ! | GGAAGGTGAAAGCATGCGAG+TGG | + | chr8.3:10714592-10714611 | MS.gene58016:CDS | 55.0% |
| CAGCTATGGGCACTCCACGT+TGG | + | chr8.3:10715105-10715124 | MS.gene58016:CDS | 60.0% | |
| GCTCAGAGATGAGCTGCCAC+AGG | + | chr8.3:10714493-10714512 | MS.gene58016:CDS | 60.0% | |
| GGGTGACCCCAGATGAACCA+GGG | + | chr8.3:10712121-10712140 | MS.gene58016:CDS | 60.0% | |
| TGGGTGACCCCAGATGAACC+AGG | + | chr8.3:10712120-10712139 | MS.gene58016:CDS | 60.0% | |
| ! | CAACGTGGAGTGCCCATAGC+TGG | - | chr8.3:10715107-10715126 | None:intergenic | 60.0% |
| ! | CCAAAGGGGGCTGGTACTCT+TGG | - | chr8.3:10713536-10713555 | None:intergenic | 60.0% |
| !! | CCAAGAGTACCAGCCCCCTT+TGG | + | chr8.3:10713533-10713552 | MS.gene58016:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10711378 | 10715224 | 10711378 | ID=MS.gene58016 |
| chr8.3 | mRNA | 10711378 | 10715224 | 10711378 | ID=MS.gene58016.t1;Parent=MS.gene58016 |
| chr8.3 | exon | 10711378 | 10711548 | 10711378 | ID=MS.gene58016.t1.exon1;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10711378 | 10711548 | 10711378 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10712072 | 10712272 | 10712072 | ID=MS.gene58016.t1.exon2;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10712072 | 10712272 | 10712072 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10712478 | 10712589 | 10712478 | ID=MS.gene58016.t1.exon3;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10712478 | 10712589 | 10712478 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10712759 | 10712985 | 10712759 | ID=MS.gene58016.t1.exon4;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10712759 | 10712985 | 10712759 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10713475 | 10713613 | 10713475 | ID=MS.gene58016.t1.exon5;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10713475 | 10713613 | 10713475 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10714468 | 10714688 | 10714468 | ID=MS.gene58016.t1.exon6;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10714468 | 10714688 | 10714468 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10714843 | 10714964 | 10714843 | ID=MS.gene58016.t1.exon7;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10714843 | 10714964 | 10714843 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| chr8.3 | exon | 10715063 | 10715224 | 10715063 | ID=MS.gene58016.t1.exon8;Parent=MS.gene58016.t1 |
| chr8.3 | CDS | 10715063 | 10715224 | 10715063 | ID=cds.MS.gene58016.t1;Parent=MS.gene58016.t1 |
| Gene Sequence |
| Protein sequence |
