Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58198.t1 | AFK47719.1 | 98 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 5.10E-266 | 926.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58198.t1 | Q949Y3 | 78.0 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 2.1e-220 | 766.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58198.t1 | I3T5C7 | 98.0 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 3.7e-266 | 926.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72585 | MS.gene58198 | PPI |
| MS.gene58198 | MS.gene91457 | PPI |
| MS.gene065024 | MS.gene58198 | PPI |
| MS.gene58198 | MS.gene91456 | PPI |
| MS.gene54918 | MS.gene58198 | PPI |
| MS.gene58198 | MS.gene83723 | PPI |
| MS.gene58198 | MS.gene54917 | PPI |
| MS.gene83724 | MS.gene58198 | PPI |
| MS.gene037272 | MS.gene58198 | PPI |
| MS.gene029291 | MS.gene58198 | PPI |
| MS.gene74939 | MS.gene58198 | PPI |
| MS.gene58198 | MS.gene72586 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58198.t1 | MTR_4g115670 | 98.004 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 0.0 | 918 |
| MS.gene58198.t1 | MTR_0188s0020 | 61.682 | 428 | 161 | 2 | 26 | 451 | 32 | 458 | 0.0 | 556 |
| MS.gene58198.t1 | MTR_4g037105 | 60.789 | 431 | 166 | 2 | 23 | 451 | 23 | 452 | 0.0 | 553 |
| MS.gene58198.t1 | MTR_1g112630 | 60.648 | 432 | 166 | 3 | 23 | 451 | 24 | 454 | 0.0 | 546 |
| MS.gene58198.t1 | MTR_3g051240 | 43.367 | 392 | 195 | 7 | 55 | 445 | 43 | 408 | 2.51e-101 | 309 |
| MS.gene58198.t1 | MTR_5g092360 | 41.872 | 406 | 209 | 7 | 41 | 445 | 35 | 414 | 1.42e-99 | 305 |
| MS.gene58198.t1 | MTR_7g104360 | 41.832 | 404 | 206 | 9 | 48 | 447 | 38 | 416 | 2.95e-98 | 301 |
| MS.gene58198.t1 | MTR_1g060360 | 43.257 | 393 | 198 | 8 | 55 | 446 | 46 | 414 | 1.68e-96 | 297 |
| MS.gene58198.t1 | MTR_7g104330 | 41.919 | 396 | 202 | 8 | 50 | 443 | 49 | 418 | 5.82e-96 | 296 |
| MS.gene58198.t1 | MTR_6g013050 | 34.864 | 479 | 223 | 11 | 36 | 439 | 52 | 516 | 7.59e-77 | 251 |
| MS.gene58198.t1 | MTR_3g083810 | 34.350 | 492 | 231 | 12 | 36 | 450 | 52 | 528 | 1.02e-72 | 239 |
| MS.gene58198.t1 | MTR_6g013050 | 34.490 | 461 | 213 | 11 | 36 | 421 | 52 | 498 | 4.91e-71 | 234 |
| MS.gene58198.t1 | MTR_7g056403 | 32.653 | 490 | 238 | 11 | 38 | 450 | 53 | 527 | 4.11e-69 | 229 |
| MS.gene58198.t1 | MTR_3g083820 | 33.943 | 492 | 233 | 12 | 36 | 450 | 52 | 528 | 4.63e-69 | 229 |
| MS.gene58198.t1 | MTR_4g037670 | 28.998 | 469 | 242 | 22 | 14 | 435 | 189 | 613 | 1.20e-33 | 134 |
| MS.gene58198.t1 | MTR_1g052505 | 28.235 | 425 | 228 | 18 | 14 | 390 | 167 | 562 | 1.18e-32 | 130 |
| MS.gene58198.t1 | MTR_3g074930 | 26.696 | 457 | 267 | 18 | 42 | 451 | 170 | 605 | 2.88e-26 | 112 |
| MS.gene58198.t1 | MTR_3g074930 | 26.551 | 403 | 250 | 13 | 81 | 451 | 224 | 612 | 4.17e-26 | 111 |
| MS.gene58198.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 67 | 532 | 3.32e-24 | 105 |
| MS.gene58198.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 144 | 609 | 4.91e-24 | 105 |
| MS.gene58198.t1 | MTR_8g063080 | 25.785 | 446 | 266 | 19 | 53 | 451 | 167 | 594 | 5.54e-24 | 105 |
| MS.gene58198.t1 | MTR_4g082930 | 24.276 | 449 | 258 | 18 | 54 | 438 | 143 | 573 | 2.95e-22 | 100 |
| MS.gene58198.t1 | MTR_5g045600 | 26.685 | 371 | 226 | 13 | 113 | 451 | 245 | 601 | 9.88e-22 | 98.6 |
| MS.gene58198.t1 | MTR_3g074970 | 25.282 | 443 | 246 | 15 | 42 | 451 | 119 | 509 | 2.04e-21 | 97.1 |
| MS.gene58198.t1 | MTR_4g082940 | 22.864 | 433 | 268 | 18 | 55 | 438 | 144 | 559 | 5.30e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58198.t1 | AT5G34850 | 78.049 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 0.0 | 754 |
| MS.gene58198.t1 | AT2G27190 | 59.603 | 453 | 177 | 3 | 1 | 451 | 9 | 457 | 0.0 | 550 |
| MS.gene58198.t1 | AT2G16430 | 57.399 | 446 | 187 | 2 | 8 | 451 | 12 | 456 | 0.0 | 532 |
| MS.gene58198.t1 | AT4G36350 | 55.677 | 458 | 188 | 7 | 1 | 451 | 3 | 452 | 1.77e-177 | 505 |
| MS.gene58198.t1 | AT1G56360 | 55.044 | 456 | 192 | 7 | 5 | 451 | 1 | 452 | 2.45e-177 | 504 |
| MS.gene58198.t1 | AT2G18130 | 51.542 | 454 | 190 | 7 | 5 | 451 | 3 | 433 | 7.70e-151 | 436 |
| MS.gene58198.t1 | AT2G16430 | 61.027 | 331 | 126 | 2 | 123 | 451 | 7 | 336 | 1.80e-148 | 427 |
| MS.gene58198.t1 | AT3G46120 | 44.760 | 458 | 162 | 13 | 5 | 451 | 3 | 380 | 4.21e-114 | 340 |
| MS.gene58198.t1 | AT3G20500 | 42.643 | 401 | 203 | 7 | 50 | 449 | 42 | 416 | 2.53e-102 | 312 |
| MS.gene58198.t1 | AT3G52820 | 41.985 | 393 | 204 | 7 | 55 | 447 | 47 | 415 | 5.15e-96 | 296 |
| MS.gene58198.t1 | AT3G52810 | 40.136 | 441 | 226 | 12 | 1 | 436 | 1 | 408 | 1.46e-94 | 292 |
| MS.gene58198.t1 | AT3G52780 | 42.172 | 396 | 203 | 8 | 55 | 447 | 44 | 416 | 3.87e-93 | 288 |
| MS.gene58198.t1 | AT1G52940 | 54.202 | 238 | 103 | 5 | 46 | 279 | 6 | 241 | 1.98e-81 | 251 |
| MS.gene58198.t1 | AT4G13700 | 34.889 | 407 | 210 | 11 | 36 | 401 | 45 | 437 | 7.10e-69 | 226 |
| MS.gene58198.t1 | AT3G07130 | 33.778 | 450 | 216 | 9 | 67 | 450 | 85 | 518 | 8.02e-69 | 228 |
| MS.gene58198.t1 | AT2G32770 | 31.263 | 499 | 239 | 13 | 38 | 448 | 51 | 533 | 1.03e-64 | 218 |
| MS.gene58198.t1 | AT3G52780 | 40.656 | 305 | 166 | 7 | 55 | 356 | 44 | 336 | 5.09e-63 | 208 |
| MS.gene58198.t1 | AT3G07130 | 31.356 | 472 | 231 | 9 | 67 | 450 | 85 | 551 | 1.13e-62 | 213 |
| MS.gene58198.t1 | AT4G13700 | 33.148 | 359 | 196 | 9 | 36 | 353 | 45 | 400 | 1.31e-56 | 193 |
| MS.gene58198.t1 | AT2G32770 | 32.454 | 379 | 179 | 7 | 107 | 421 | 62 | 427 | 2.32e-54 | 187 |
| MS.gene58198.t1 | AT2G32770 | 28.858 | 499 | 222 | 14 | 38 | 448 | 51 | 504 | 1.78e-51 | 182 |
| MS.gene58198.t1 | AT1G13750 | 26.455 | 378 | 232 | 13 | 106 | 451 | 232 | 595 | 1.21e-23 | 104 |
| MS.gene58198.t1 | AT5G50400 | 25.000 | 488 | 304 | 17 | 5 | 451 | 55 | 521 | 2.15e-23 | 103 |
| MS.gene58198.t1 | AT5G50400 | 26.596 | 376 | 234 | 13 | 106 | 451 | 230 | 593 | 2.20e-23 | 103 |
| MS.gene58198.t1 | AT4G24890 | 25.543 | 368 | 234 | 13 | 113 | 451 | 241 | 597 | 1.10e-20 | 95.5 |
| MS.gene58198.t1 | AT1G13900 | 26.804 | 388 | 212 | 18 | 103 | 438 | 203 | 570 | 1.31e-20 | 95.1 |
| MS.gene58198.t1 | AT2G03450 | 25.166 | 453 | 249 | 21 | 53 | 438 | 141 | 570 | 1.14e-18 | 89.4 |
Find 119 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATATACCACTCCTTATT+TGG | 0.124320 | 8.3:+10768301 | MS.gene58198:CDS |
| CCAGATGCCACCTACAAATT+TGG | 0.149906 | 8.3:+10767353 | MS.gene58198:CDS |
| CAGTAATGAAGCTCACTTTA+TGG | 0.198207 | 8.3:+10769365 | MS.gene58198:CDS |
| CGGTTTCAAATTACACTTTC+GGG | 0.223069 | 8.3:+10766996 | MS.gene58198:CDS |
| GTGATTCTTCTCGAGAATTT+TGG | 0.264384 | 8.3:+10767306 | MS.gene58198:CDS |
| TGACTGGACCCTGGTTCATC+TGG | 0.265537 | 8.3:-10766923 | None:intergenic |
| TGTTATGTTGTAATCTATAT+TGG | 0.270249 | 8.3:-10769647 | None:intergenic |
| GCTCAAACTGTTCTATTTGT+TGG | 0.306088 | 8.3:+10767612 | MS.gene58198:CDS |
| TTATTGGTCGTGAAGGTTTA+GGG | 0.329889 | 8.3:+10769842 | MS.gene58198:intron |
| TCACGAAATGCAGAGTATTC+TGG | 0.330065 | 8.3:-10769873 | None:intergenic |
| ACTAAATACTACTACAGAAT+TGG | 0.331165 | 8.3:+10767278 | MS.gene58198:CDS |
| GTACTCTTGGACGCCAAATA+AGG | 0.334148 | 8.3:-10768314 | None:intergenic |
| ACCTACAAATTTGGGATCAT+TGG | 0.339885 | 8.3:+10767362 | MS.gene58198:CDS |
| ATGAGCTGCCACAGGTTGAT+AGG | 0.342674 | 8.3:+10769295 | MS.gene58198:CDS |
| GTGGCATCTGGTCCAACTTT+AGG | 0.343540 | 8.3:-10767341 | None:intergenic |
| TATCTACATTTCAGGTGATC+TGG | 0.362894 | 8.3:+10767539 | MS.gene58198:intron |
| ATCAAGAAGGTCTTGCTTCT+AGG | 0.366011 | 8.3:+10769737 | MS.gene58198:CDS |
| CAGCGTATCAGCCATGGATA+TGG | 0.377763 | 8.3:+10767718 | MS.gene58198:CDS |
| AAGGTTGATGTGATCTTTGC+TGG | 0.378443 | 8.3:+10769435 | MS.gene58198:CDS |
| TTATCCAGCTATTCTCCATT+TGG | 0.379906 | 8.3:+10768386 | MS.gene58198:CDS |
| TTGGTTTGCGGTGGGATACA+TGG | 0.381344 | 8.3:+10767673 | MS.gene58198:CDS |
| GACTGGACCCTGGTTCATCT+GGG | 0.388808 | 8.3:-10766922 | None:intergenic |
| ATTCATCATTGTCTTGTTGA+AGG | 0.390644 | 8.3:+10767037 | MS.gene58198:CDS |
| CCAAATTTGTAGGTGGCATC+TGG | 0.391166 | 8.3:-10767353 | None:intergenic |
| CAGATGCCACCTACAAATTT+GGG | 0.397664 | 8.3:+10767354 | MS.gene58198:CDS |
| TGAAGTGAACCTACCAATAC+TGG | 0.408402 | 8.3:-10770010 | None:intergenic |
| GGGTCCAGTCATGTACAATT+TGG | 0.411196 | 8.3:+10766935 | MS.gene58198:CDS |
| GAGATCTTTCTTATGCTGAT+AGG | 0.430471 | 8.3:+10767634 | MS.gene58198:CDS |
| TGCGAGTGGTTTACGAAAGC+TGG | 0.433609 | 8.3:+10769400 | MS.gene58198:CDS |
| ACGGTTTCAAATTACACTTT+CGG | 0.440557 | 8.3:+10766995 | MS.gene58198:CDS |
| AGTACACACCACAATGGAAA+TGG | 0.441734 | 8.3:+10769265 | MS.gene58198:CDS |
| TCCAGCATTTGCAGTTCCTA+AGG | 0.443867 | 8.3:+10766301 | MS.gene58198:CDS |
| ACCAATGATCCCAAATTTGT+AGG | 0.446529 | 8.3:-10767363 | None:intergenic |
| AAACCATACCGATCTTTCAT+AGG | 0.450195 | 8.3:-10769469 | None:intergenic |
| TTCAGCAGAGATGTGTATGC+AGG | 0.453445 | 8.3:+10766221 | MS.gene58198:CDS |
| CAACGTGGAGTGCCCATAGC+TGG | 0.454170 | 8.3:-10769898 | None:intergenic |
| CCCTTAGGAACTGCAAATGC+TGG | 0.455633 | 8.3:-10766302 | None:intergenic |
| TGAGGTGCATTATGTCCCTT+AGG | 0.458007 | 8.3:-10766317 | None:intergenic |
| ACAACATAACAACTGGTAAC+CGG | 0.458101 | 8.3:+10769659 | MS.gene58198:CDS |
| ATAGATTACAACATAACAAC+TGG | 0.461994 | 8.3:+10769652 | MS.gene58198:CDS |
| GCATTTCGTGAAGCCAGCTA+TGG | 0.469744 | 8.3:+10769885 | MS.gene58198:CDS |
| GTTACCAAATGGAGAATAGC+TGG | 0.473944 | 8.3:-10768390 | None:intergenic |
| CACTGGAACCGCAATGATGA+TGG | 0.473973 | 8.3:+10769951 | MS.gene58198:CDS |
| TTTGAAACACCTCCTAAAGT+TGG | 0.482762 | 8.3:+10767329 | MS.gene58198:CDS |
| ACTTTCGGGGAATACAAGTC+TGG | 0.489018 | 8.3:+10767010 | MS.gene58198:CDS |
| CATGGGCTCGATTTGTTGAA+AGG | 0.490455 | 8.3:+10767691 | MS.gene58198:CDS |
| ATCTACATTTCAGGTGATCT+GGG | 0.492376 | 8.3:+10767540 | MS.gene58198:intron |
| CTCTAGTGCTCTACCATGTA+GGG | 0.493891 | 8.3:-10767771 | None:intergenic |
| CAGCCATGGATATGGAATAC+AGG | 0.494179 | 8.3:+10767726 | MS.gene58198:CDS |
| AGTGGTATATCGTTGAAGAT+AGG | 0.499275 | 8.3:-10768291 | None:intergenic |
| TCTCTAGTGCTCTACCATGT+AGG | 0.502444 | 8.3:-10767772 | None:intergenic |
| ATTTGTCAGCTACGGGATAC+CGG | 0.505552 | 8.3:-10769678 | None:intergenic |
| GAAAAGCAGTAATCATCTCA+TGG | 0.507583 | 8.3:+10766894 | MS.gene58198:CDS |
| TCGTATTGCATAACCAGTAT+TGG | 0.514437 | 8.3:+10769997 | MS.gene58198:CDS |
| GCAAATGCTGGATGATTAAG+TGG | 0.518212 | 8.3:-10766290 | None:intergenic |
| ACGCCTGATTGCATACCAAA+GGG | 0.530829 | 8.3:-10768342 | None:intergenic |
| AATAGAGTACTTTCCCTACA+TGG | 0.530906 | 8.3:+10767758 | MS.gene58198:CDS |
| TAAGAAATACATACTTGTTG+AGG | 0.531408 | 8.3:-10766335 | None:intergenic |
| AGGTGCTGATTTGTCAGCTA+CGG | 0.538709 | 8.3:-10769686 | None:intergenic |
| TTGTCTTGTTGAAGGACTTG+AGG | 0.540359 | 8.3:+10767045 | MS.gene58198:CDS |
| GTGTACATCACGGTCGGAGA+TGG | 0.540371 | 8.3:+10769709 | MS.gene58198:CDS |
| ATCACACAAGGTGATTATGA+TGG | 0.540793 | 8.3:+10766872 | MS.gene58198:CDS |
| TCAATCTACTGCACAAGGCA+CGG | 0.543185 | 8.3:+10766976 | MS.gene58198:CDS |
| TCTCTGAGCCATTTCCATTG+TGG | 0.544206 | 8.3:-10769273 | None:intergenic |
| TGAGCTGCCACAGGTTGATA+GGG | 0.547830 | 8.3:+10769296 | MS.gene58198:CDS |
| GGTGCTGATTTGTCAGCTAC+GGG | 0.549793 | 8.3:-10769685 | None:intergenic |
| CAATGATGATGGCAAGAAAG+TGG | 0.559117 | 8.3:+10769962 | MS.gene58198:CDS |
| CATTTCGTGAAGCCAGCTAT+GGG | 0.559509 | 8.3:+10769886 | MS.gene58198:CDS |
| TTTCCTGTATTCCATATCCA+TGG | 0.562078 | 8.3:-10767729 | None:intergenic |
| CGTTGAAGATAGGACTTGAA+AGG | 0.566750 | 8.3:-10768281 | None:intergenic |
| GAACACATGCTGTCTACCAC+TGG | 0.567046 | 8.3:+10769934 | MS.gene58198:CDS |
| CCAGCATTTGCAGTTCCTAA+GGG | 0.567845 | 8.3:+10766302 | MS.gene58198:CDS |
| CACGCCTGATTGCATACCAA+AGG | 0.568929 | 8.3:-10768343 | None:intergenic |
| GCTCAGAGATGAGCTGCCAC+AGG | 0.569548 | 8.3:+10769287 | MS.gene58198:CDS |
| GCATCTGGTCCAACTTTAGG+AGG | 0.569812 | 8.3:-10767338 | None:intergenic |
| TGGGTGACCCCAGATGAACC+AGG | 0.573846 | 8.3:+10766914 | MS.gene58198:CDS |
| AGTACACTGATGTTGGTTTG+CGG | 0.573861 | 8.3:+10767661 | MS.gene58198:CDS |
| AGGTATCAGTACACTGATGT+TGG | 0.576726 | 8.3:+10767654 | MS.gene58198:CDS |
| GGAGTACAGCGTATCAGCCA+TGG | 0.578522 | 8.3:+10767712 | MS.gene58198:CDS |
| CTCTATATAGTGCTCAAGAG+TGG | 0.578714 | 8.3:-10767583 | None:intergenic |
| TACATCACGGTCGGAGATGG+AGG | 0.579269 | 8.3:+10769712 | MS.gene58198:CDS |
| TCAGCAGAGATGTGTATGCA+GGG | 0.579504 | 8.3:+10766222 | MS.gene58198:CDS |
| CTTTCTTGCCATCATCATTG+CGG | 0.582581 | 8.3:-10769959 | None:intergenic |
| TACTACTACAGAATTGGAAG+TGG | 0.583196 | 8.3:+10767284 | MS.gene58198:CDS |
| AATGCAGAGTATTCTGGCTG+AGG | 0.586901 | 8.3:-10769867 | None:intergenic |
| TGGTTTGCGGTGGGATACAT+GGG | 0.588603 | 8.3:+10767674 | MS.gene58198:CDS |
| CACTGATGTTGGTTTGCGGT+GGG | 0.590870 | 8.3:+10767665 | MS.gene58198:CDS |
| ACTGGACCCTGGTTCATCTG+GGG | 0.591269 | 8.3:-10766921 | None:intergenic |
| TGTGCCAAATTGTACATGAC+TGG | 0.592331 | 8.3:-10766939 | None:intergenic |
| TGTTCATGCCTATGAAAGAT+CGG | 0.594706 | 8.3:+10769461 | MS.gene58198:CDS |
| AAAAGCAGTAATCATCTCAT+GGG | 0.596532 | 8.3:+10766895 | MS.gene58198:CDS |
| TTAAGTGGAATATCAACAGA+TGG | 0.596627 | 8.3:-10766275 | None:intergenic |
| CATCATCATTGCGGTTCCAG+TGG | 0.598630 | 8.3:-10769950 | None:intergenic |
| ATCTTTCATAGGCATGAACA+TGG | 0.603823 | 8.3:-10769458 | None:intergenic |
| AAGAAAATAGAAAGATGCAG+AGG | 0.605085 | 8.3:+10766159 | None:intergenic |
| ACACTGATGTTGGTTTGCGG+TGG | 0.606840 | 8.3:+10767664 | MS.gene58198:CDS |
| AATATCAACAGATGGAAACT+CGG | 0.608614 | 8.3:-10766267 | None:intergenic |
| AATGAAGCTCACTTTATGGA+AGG | 0.608755 | 8.3:+10769369 | MS.gene58198:CDS |
| GCCTGATTGCATACCAAAGG+GGG | 0.618674 | 8.3:-10768340 | None:intergenic |
| AAGCTGGTTCATCAAGTACA+AGG | 0.625171 | 8.3:+10769416 | MS.gene58198:CDS |
| GGTTTCAAATTACACTTTCG+GGG | 0.626128 | 8.3:+10766997 | MS.gene58198:CDS |
| TCTCCGACCGTGATGTACAC+AGG | 0.629591 | 8.3:-10769706 | None:intergenic |
| TGCATGAGAACAATGAGCCA+AGG | 0.630461 | 8.3:-10769327 | None:intergenic |
| GGAGATGGAGGAAATCAAGA+AGG | 0.639359 | 8.3:+10769724 | MS.gene58198:CDS |
| TTGATAGGGAAAAGACACCT+TGG | 0.640827 | 8.3:+10769310 | MS.gene58198:CDS |
| GGAAGGTGAAAGCATGCGAG+TGG | 0.643581 | 8.3:+10769386 | MS.gene58198:CDS |
| AAATTTCAATCTACTGCACA+AGG | 0.649428 | 8.3:+10766971 | MS.gene58198:CDS |
| CAGTAAAGTACACACCACAA+TGG | 0.656235 | 8.3:+10769259 | MS.gene58198:intron |
| CGCCTGATTGCATACCAAAG+GGG | 0.656819 | 8.3:-10768341 | None:intergenic |
| GCACCTGTGTACATCACGGT+CGG | 0.660426 | 8.3:+10769703 | MS.gene58198:CDS |
| CAGCTATGGGCACTCCACGT+TGG | 0.662828 | 8.3:+10769899 | MS.gene58198:CDS |
| ATCAGCACCTGTGTACATCA+CGG | 0.663406 | 8.3:+10769699 | MS.gene58198:CDS |
| AATGATCCCAAATTTGTAGG+TGG | 0.663512 | 8.3:-10767360 | None:intergenic |
| AATTGTACATGACTGGACCC+TGG | 0.667509 | 8.3:-10766932 | None:intergenic |
| CTTGGACGCCAAATAAGGAG+TGG | 0.681481 | 8.3:-10768309 | None:intergenic |
| GGGTGACCCCAGATGAACCA+GGG | 0.686729 | 8.3:+10766915 | MS.gene58198:CDS |
| TTGTAGGTGCATATCACACA+AGG | 0.690964 | 8.3:+10766860 | MS.gene58198:intron |
| GCTTCATTACTGTTGTAGAG+CGG | 0.703187 | 8.3:-10769354 | None:intergenic |
| GTTATGCAATACGAATGAGT+CGG | 0.728481 | 8.3:-10769988 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATATATACTTCAATAAA+AGG | - | chr8.3:10769176-10769195 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGGATTATAAT+AGG | + | chr8.3:10768617-10768636 | MS.gene58198:intron | 15.0% |
| !! | GTATTTAGAAAAAATATGTT+TGG | + | chr8.3:10768568-10768587 | MS.gene58198:intron | 15.0% |
| !! | TATTAATATTTCTTACATGT+TGG | + | chr8.3:10768433-10768452 | MS.gene58198:intron | 15.0% |
| !!! | ATATTCTTTTACATAAACTT+AGG | + | chr8.3:10768465-10768484 | MS.gene58198:intron | 15.0% |
| !!! | TATTATAATCCCTATTTTTA+TGG | - | chr8.3:10768618-10768637 | None:intergenic | 15.0% |
| !!! | TATTCTTTTACATAAACTTA+GGG | + | chr8.3:10768466-10768485 | MS.gene58198:intron | 15.0% |
| !!! | TTGTGTATTTATTTATTTTC+TGG | + | chr8.3:10767801-10767820 | MS.gene58198:intron | 15.0% |
| !! | AAAAAATTTCCCAAAGAAAA+GGG | - | chr8.3:10768690-10768709 | None:intergenic | 20.0% |
| !! | AAGTGAAATAATTTCAAAAG+TGG | + | chr8.3:10767128-10767147 | MS.gene58198:intron | 20.0% |
| !! | AAGTTATATTTGTTTATTCC+TGG | - | chr8.3:10768798-10768817 | None:intergenic | 20.0% |
| !! | AGTTATATTTGTTTATTCCT+GGG | - | chr8.3:10768797-10768816 | None:intergenic | 20.0% |
| !! | ATAAGTGATCAATATTCAAT+AGG | - | chr8.3:10768932-10768951 | None:intergenic | 20.0% |
| !! | ATATATACTTCAATAAAAGG+TGG | - | chr8.3:10769173-10769192 | None:intergenic | 20.0% |
| !! | GTTAACTTTATAATATTCCT+AGG | + | chr8.3:10768590-10768609 | MS.gene58198:intron | 20.0% |
| !! | TAGTAAATTGTAACAAACAT+AGG | + | chr8.3:10768747-10768766 | MS.gene58198:intron | 20.0% |
| !! | TGTTATGTTGTAATCTATAT+TGG | - | chr8.3:10769650-10769669 | None:intergenic | 20.0% |
| !!! | AAATATAAATTTTCTACCAC+TGG | - | chr8.3:10766729-10766748 | None:intergenic | 20.0% |
| !!! | AATTTACTAAATTTTATCCC+CGG | - | chr8.3:10768736-10768755 | None:intergenic | 20.0% |
| !!! | CATATTTTTTCTAAATACCT+TGG | - | chr8.3:10768566-10768585 | None:intergenic | 20.0% |
| !!! | CTAGATACAATTATTCATTT+TGG | - | chr8.3:10767519-10767538 | None:intergenic | 20.0% |
| !!! | TCTAACTTTTATGTTTTAGT+TGG | + | chr8.3:10768874-10768893 | MS.gene58198:intron | 20.0% |
| ! | AAATTATGATGTTATGCCTA+TGG | + | chr8.3:10766686-10766705 | MS.gene58198:intron | 25.0% |
| ! | AAGTACATTCTTATGTTTGT+AGG | + | chr8.3:10769065-10769084 | MS.gene58198:intron | 25.0% |
| ! | ACACTAATGTGATAAAATCT+TGG | - | chr8.3:10766806-10766825 | None:intergenic | 25.0% |
| ! | ACAGCTTATATGTTTATAAG+CGG | + | chr8.3:10766422-10766441 | MS.gene58198:intron | 25.0% |
| ! | ACTAAATACTACTACAGAAT+TGG | + | chr8.3:10767278-10767297 | MS.gene58198:CDS | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr8.3:10768502-10768521 | MS.gene58198:intron | 25.0% |
| ! | ATAGATTACAACATAACAAC+TGG | + | chr8.3:10769652-10769671 | MS.gene58198:CDS | 25.0% |
| ! | ATTCCTTGGAATATAAAGAT+GGG | + | chr8.3:10768531-10768550 | MS.gene58198:intron | 25.0% |
| ! | GAAAAAATTTCCCAAAGAAA+AGG | - | chr8.3:10768691-10768710 | None:intergenic | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | - | chr8.3:10768511-10768530 | None:intergenic | 25.0% |
| ! | TAACTTAATTCTGTTACAGA+TGG | + | chr8.3:10769760-10769779 | MS.gene58198:intron | 25.0% |
| ! | TAATGAATCTTTGATTCATC+AGG | + | chr8.3:10766377-10766396 | MS.gene58198:intron | 25.0% |
| ! | TACTAAAAGAAACTTCACAA+AGG | - | chr8.3:10768144-10768163 | None:intergenic | 25.0% |
| ! | TGTGTAACCTATAATAGAAA+GGG | - | chr8.3:10768211-10768230 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAATATCTTCT+AGG | - | chr8.3:10766649-10766668 | None:intergenic | 25.0% |
| !! | AGTTTCAGTTTTCACATTTT+TGG | + | chr8.3:10767851-10767870 | MS.gene58198:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8.3:10766622-10766641 | MS.gene58198:intron | 25.0% |
| !! | ATTTACTAAATTTTATCCCC+GGG | - | chr8.3:10768735-10768754 | None:intergenic | 25.0% |
| !! | ATTTCTATCATTTTATTCCC+AGG | + | chr8.3:10768777-10768796 | MS.gene58198:intron | 25.0% |
| !! | TAAGAAATACATACTTGTTG+AGG | - | chr8.3:10766338-10766357 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8.3:10766623-10766642 | MS.gene58198:intron | 25.0% |
| !!! | ATTGTTTTTCATGTAACCAT+AGG | - | chr8.3:10766705-10766724 | None:intergenic | 25.0% |
| AAAAGCAGTAATCATCTCAT+GGG | + | chr8.3:10766895-10766914 | MS.gene58198:CDS | 30.0% | |
| AAATGTGAAAACTGAAACTG+TGG | - | chr8.3:10767850-10767869 | None:intergenic | 30.0% | |
| AAATTCCAACGGAATGAAAA+CGG | - | chr8.3:10768038-10768057 | None:intergenic | 30.0% | |
| AAATTTCAATCTACTGCACA+AGG | + | chr8.3:10766971-10766990 | MS.gene58198:CDS | 30.0% | |
| AACACAAAGAAAAATGCGAA+CGG | - | chr8.3:10767210-10767229 | None:intergenic | 30.0% | |
| AACGATGAAAAAGATTATGC+AGG | - | chr8.3:10767403-10767422 | None:intergenic | 30.0% | |
| AAGCAAAAAGAAATCCTCAT+AGG | - | chr8.3:10767465-10767484 | None:intergenic | 30.0% | |
| AATATCAACAGATGGAAACT+CGG | - | chr8.3:10766270-10766289 | None:intergenic | 30.0% | |
| AATATTCAATAGGACGTCAA+AGG | - | chr8.3:10768922-10768941 | None:intergenic | 30.0% | |
| AATGATATGCTAAGAACCTA+GGG | - | chr8.3:10768833-10768852 | None:intergenic | 30.0% | |
| ACAAAACTACAGGAATAGAA+AGG | - | chr8.3:10768009-10768028 | None:intergenic | 30.0% | |
| ACGATGAAAAAGATTATGCA+GGG | - | chr8.3:10767402-10767421 | None:intergenic | 30.0% | |
| ACGGTTTCAAATTACACTTT+CGG | + | chr8.3:10766995-10767014 | MS.gene58198:CDS | 30.0% | |
| ATTCCCATCTTTATATTCCA+AGG | - | chr8.3:10768537-10768556 | None:intergenic | 30.0% | |
| CATTCCTTGGAATATAAAGA+TGG | + | chr8.3:10768530-10768549 | MS.gene58198:intron | 30.0% | |
| GATATAAATCTGCTTGATCA+GGG | + | chr8.3:10768248-10768267 | MS.gene58198:intron | 30.0% | |
| GTATCTAGTATCTACATTTC+AGG | + | chr8.3:10767531-10767550 | MS.gene58198:intron | 30.0% | |
| GTGTGTAACCTATAATAGAA+AGG | - | chr8.3:10768212-10768231 | None:intergenic | 30.0% | |
| TACATGAAAAACAATTCCAG+TGG | + | chr8.3:10766710-10766729 | MS.gene58198:intron | 30.0% | |
| TCATGCATAATACAGAGAAA+AGG | - | chr8.3:10767943-10767962 | None:intergenic | 30.0% | |
| TCCTAGGAACCATAAAAATA+GGG | + | chr8.3:10768606-10768625 | MS.gene58198:intron | 30.0% | |
| TCTTATGTTTGTAGGTCTAA+AGG | + | chr8.3:10769073-10769092 | MS.gene58198:intron | 30.0% | |
| TGAGGTAATTGTTTCAGATA+AGG | + | chr8.3:10767063-10767082 | MS.gene58198:intron | 30.0% | |
| TGATATAAATCTGCTTGATC+AGG | + | chr8.3:10768247-10768266 | MS.gene58198:intron | 30.0% | |
| TTAAGTGGAATATCAACAGA+TGG | - | chr8.3:10766278-10766297 | None:intergenic | 30.0% | |
| TTCCTAGGAACCATAAAAAT+AGG | + | chr8.3:10768605-10768624 | MS.gene58198:intron | 30.0% | |
| TTCTTCTTAACTACTATGTC+TGG | + | chr8.3:10767906-10767925 | MS.gene58198:intron | 30.0% | |
| ! | AAGATGGGAATTTTATTCCA+AGG | + | chr8.3:10768546-10768565 | MS.gene58198:intron | 30.0% |
| ! | ATTCATCATTGTCTTGTTGA+AGG | + | chr8.3:10767037-10767056 | MS.gene58198:CDS | 30.0% |
| ! | TAGCACTTTTGCTTGTATAT+GGG | - | chr8.3:10768978-10768997 | None:intergenic | 30.0% |
| ! | TGTTTTCATAGATGAAGCAT+AGG | - | chr8.3:10766405-10766424 | None:intergenic | 30.0% |
| ! | TTAGCACTTTTGCTTGTATA+TGG | - | chr8.3:10768979-10768998 | None:intergenic | 30.0% |
| !! | GCAGCGATTTATTATTTTAC+TGG | - | chr8.3:10767828-10767847 | None:intergenic | 30.0% |
| !! | GTCTCATGATTTTAATGATG+TGG | + | chr8.3:10767489-10767508 | MS.gene58198:intron | 30.0% |
| !! | GTGTTGTTTATTTCCATTGT+AGG | + | chr8.3:10766844-10766863 | MS.gene58198:intron | 30.0% |
| !! | TACATAAAGTATTGCCTATG+AGG | + | chr8.3:10767448-10767467 | MS.gene58198:intron | 30.0% |
| !!! | AGTTTTCACATTTTTGGCAT+TGG | + | chr8.3:10767857-10767876 | MS.gene58198:intron | 30.0% |
| !!! | GCACGTTTTAATTCTGTTAT+TGG | + | chr8.3:10769826-10769845 | MS.gene58198:intron | 30.0% |
| !!! | TCTATTTTTTATCTCCAACG+TGG | - | chr8.3:10769916-10769935 | None:intergenic | 30.0% |
| AAACCATACCGATCTTTCAT+AGG | - | chr8.3:10769472-10769491 | None:intergenic | 35.0% | |
| AAATTTCCCAAAGAAAAGGG+TGG | - | chr8.3:10768687-10768706 | None:intergenic | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr8.3:10768663-10768682 | None:intergenic | 35.0% | |
| AATGAAGCTCACTTTATGGA+AGG | + | chr8.3:10769369-10769388 | MS.gene58198:CDS | 35.0% | |
| AATGATCCCAAATTTGTAGG+TGG | - | chr8.3:10767363-10767382 | None:intergenic | 35.0% | |
| AATTCTGTTATTGGTCGTGA+AGG | + | chr8.3:10769835-10769854 | MS.gene58198:intron | 35.0% | |
| ACAACATAACAACTGGTAAC+CGG | + | chr8.3:10769659-10769678 | MS.gene58198:CDS | 35.0% | |
| ACCAATGATCCCAAATTTGT+AGG | - | chr8.3:10767366-10767385 | None:intergenic | 35.0% | |
| ACGATATACCACTCCTTATT+TGG | + | chr8.3:10768301-10768320 | MS.gene58198:CDS | 35.0% | |
| AGATGTTTACTTCTCTACCT+TGG | + | chr8.3:10769004-10769023 | MS.gene58198:intron | 35.0% | |
| AGTGGTATATCGTTGAAGAT+AGG | - | chr8.3:10768294-10768313 | None:intergenic | 35.0% | |
| ATCACACAAGGTGATTATGA+TGG | + | chr8.3:10766872-10766891 | MS.gene58198:CDS | 35.0% | |
| ATCTCTGCTGAAAAACACAA+AGG | - | chr8.3:10766213-10766232 | None:intergenic | 35.0% | |
| ATCTTTCATAGGCATGAACA+TGG | - | chr8.3:10769461-10769480 | None:intergenic | 35.0% | |
| ATGTTTACTTCTCTACCTTG+GGG | + | chr8.3:10769006-10769025 | MS.gene58198:intron | 35.0% | |
| CAATGATATGCTAAGAACCT+AGG | - | chr8.3:10768834-10768853 | None:intergenic | 35.0% | |
| CAGTAATGAAGCTCACTTTA+TGG | + | chr8.3:10769365-10769384 | MS.gene58198:CDS | 35.0% | |
| CGGTTTCAAATTACACTTTC+GGG | + | chr8.3:10766996-10767015 | MS.gene58198:CDS | 35.0% | |
| CTAGGTTCTTAGCATATCAT+TGG | + | chr8.3:10768832-10768851 | MS.gene58198:intron | 35.0% | |
| CTTCACACCCTTTCTATTAT+AGG | + | chr8.3:10768201-10768220 | MS.gene58198:intron | 35.0% | |
| CTTCAGCATAACATATGAAG+CGG | - | chr8.3:10768088-10768107 | None:intergenic | 35.0% | |
| GAAAAGCAGTAATCATCTCA+TGG | + | chr8.3:10766894-10766913 | MS.gene58198:CDS | 35.0% | |
| GAATTTATTCCCATCTCCAT+GGG | + | chr8.3:10768651-10768670 | MS.gene58198:intron | 35.0% | |
| GAGAAATGTGTATGCAATAG+TGG | + | chr8.3:10766663-10766682 | MS.gene58198:intron | 35.0% | |
| GAGAGTAGAATTATCATCAC+TGG | + | chr8.3:10767085-10767104 | MS.gene58198:intron | 35.0% | |
| GAGATCTTTCTTATGCTGAT+AGG | + | chr8.3:10767634-10767653 | MS.gene58198:CDS | 35.0% | |
| GATGTTTACTTCTCTACCTT+GGG | + | chr8.3:10769005-10769024 | MS.gene58198:intron | 35.0% | |
| GCTCAAACTGTTCTATTTGT+TGG | + | chr8.3:10767612-10767631 | MS.gene58198:CDS | 35.0% | |
| GGTTTCAAATTACACTTTCG+GGG | + | chr8.3:10766997-10767016 | MS.gene58198:CDS | 35.0% | |
| GTTATGCAATACGAATGAGT+CGG | - | chr8.3:10769991-10770010 | None:intergenic | 35.0% | |
| TACTACTACAGAATTGGAAG+TGG | + | chr8.3:10767284-10767303 | MS.gene58198:CDS | 35.0% | |
| TGAATTTATTCCCATCTCCA+TGG | + | chr8.3:10768650-10768669 | MS.gene58198:intron | 35.0% | |
| TGTTCATGCCTATGAAAGAT+CGG | + | chr8.3:10769461-10769480 | MS.gene58198:CDS | 35.0% | |
| TTATCCAGCTATTCTCCATT+TGG | + | chr8.3:10768386-10768405 | MS.gene58198:CDS | 35.0% | |
| TTATTGGTCGTGAAGGTTTA+GGG | + | chr8.3:10769842-10769861 | MS.gene58198:intron | 35.0% | |
| TTCAGCATAACATATGAAGC+GGG | - | chr8.3:10768087-10768106 | None:intergenic | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | - | chr8.3:10768522-10768541 | None:intergenic | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | + | chr8.3:10768517-10768536 | MS.gene58198:intron | 35.0% | |
| TTTCCTGTATTCCATATCCA+TGG | - | chr8.3:10767732-10767751 | None:intergenic | 35.0% | |
| ! | AATAGAGTACTTTCCCTACA+TGG | + | chr8.3:10767758-10767777 | MS.gene58198:CDS | 35.0% |
| ! | ACCTACAAATTTGGGATCAT+TGG | + | chr8.3:10767362-10767381 | MS.gene58198:CDS | 35.0% |
| ! | ACGGTTTTCTACAAAACTAC+AGG | - | chr8.3:10768019-10768038 | None:intergenic | 35.0% |
| ! | AGAGCAGATTAGTTACCAAA+TGG | - | chr8.3:10768404-10768423 | None:intergenic | 35.0% |
| ! | AGCACTTTTGCTTGTATATG+GGG | - | chr8.3:10768977-10768996 | None:intergenic | 35.0% |
| ! | ATCTACATTTCAGGTGATCT+GGG | + | chr8.3:10767540-10767559 | MS.gene58198:intron | 35.0% |
| ! | GTGATTCTTCTCGAGAATTT+TGG | + | chr8.3:10767306-10767325 | MS.gene58198:CDS | 35.0% |
| ! | TATCTACATTTCAGGTGATC+TGG | + | chr8.3:10767539-10767558 | MS.gene58198:intron | 35.0% |
| ! | TTATTGCCACCCTTTTCTTT+GGG | + | chr8.3:10768678-10768697 | MS.gene58198:intron | 35.0% |
| ! | TTTATTGCCACCCTTTTCTT+TGG | + | chr8.3:10768677-10768696 | MS.gene58198:intron | 35.0% |
| ! | TTTGAAACACCTCCTAAAGT+TGG | + | chr8.3:10767329-10767348 | MS.gene58198:CDS | 35.0% |
| !!! | GGGAAATTTTTTCTATTCCC+AGG | + | chr8.3:10768698-10768717 | MS.gene58198:intron | 35.0% |
| !!! | TCCCTATTTTTATGGTTCCT+AGG | - | chr8.3:10768610-10768629 | None:intergenic | 35.0% |
| AAGTATGCTGTCATGTGCAA+TGG | - | chr8.3:10767966-10767985 | None:intergenic | 40.0% | |
| AATATCTTCTAGGCCCTGTT+TGG | - | chr8.3:10766639-10766658 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr8.3:10768814-10768833 | MS.gene58198:intron | 40.0% | |
| AGGTATCAGTACACTGATGT+TGG | + | chr8.3:10767654-10767673 | MS.gene58198:CDS | 40.0% | |
| AGTACACACCACAATGGAAA+TGG | + | chr8.3:10769265-10769284 | MS.gene58198:CDS | 40.0% | |
| ATCAAGAAGGTCTTGCTTCT+AGG | + | chr8.3:10769737-10769756 | MS.gene58198:CDS | 40.0% | |
| ATGCCTATGAAAGATCGGTA+TGG | + | chr8.3:10769466-10769485 | MS.gene58198:intron | 40.0% | |
| CAATAAAGTTCCCATGGAGA+TGG | - | chr8.3:10768664-10768683 | None:intergenic | 40.0% | |
| CAGATGCCACCTACAAATTT+GGG | + | chr8.3:10767354-10767373 | MS.gene58198:CDS | 40.0% | |
| CAGTAAAGTACACACCACAA+TGG | + | chr8.3:10769259-10769278 | MS.gene58198:intron | 40.0% | |
| CGTTGAAGATAGGACTTGAA+AGG | - | chr8.3:10768284-10768303 | None:intergenic | 40.0% | |
| CTCTATATAGTGCTCAAGAG+TGG | - | chr8.3:10767586-10767605 | None:intergenic | 40.0% | |
| CTTTCTTGCCATCATCATTG+CGG | - | chr8.3:10769962-10769981 | None:intergenic | 40.0% | |
| GCAAATGCTGGATGATTAAG+TGG | - | chr8.3:10766293-10766312 | None:intergenic | 40.0% | |
| GCACACATAAGAATCCACTA+CGG | - | chr8.3:10769595-10769614 | None:intergenic | 40.0% | |
| GCCTGCTAACAAAATTCCAA+CGG | - | chr8.3:10768049-10768068 | None:intergenic | 40.0% | |
| GCTTCATTACTGTTGTAGAG+CGG | - | chr8.3:10769357-10769376 | None:intergenic | 40.0% | |
| GTTACCAAATGGAGAATAGC+TGG | - | chr8.3:10768393-10768412 | None:intergenic | 40.0% | |
| GTTATTGGTCGTGAAGGTTT+AGG | + | chr8.3:10769841-10769860 | MS.gene58198:intron | 40.0% | |
| TCAGCATAACATATGAAGCG+GGG | - | chr8.3:10768086-10768105 | None:intergenic | 40.0% | |
| TGTGCCAAATTGTACATGAC+TGG | - | chr8.3:10766942-10766961 | None:intergenic | 40.0% | |
| TGTGTGATATGCACCTACAA+TGG | - | chr8.3:10766860-10766879 | None:intergenic | 40.0% | |
| TTGATAGGGAAAAGACACCT+TGG | + | chr8.3:10769310-10769329 | MS.gene58198:CDS | 40.0% | |
| TTGTAGGTGCATATCACACA+AGG | + | chr8.3:10766860-10766879 | MS.gene58198:intron | 40.0% | |
| ! | AAGCTGGTTCATCAAGTACA+AGG | + | chr8.3:10769416-10769435 | MS.gene58198:CDS | 40.0% |
| ! | AGGGTGTGAAGTTTTCAACA+CGG | - | chr8.3:10768192-10768211 | None:intergenic | 40.0% |
| ! | GAAAACCGTTTTCATTCCGT+TGG | + | chr8.3:10768030-10768049 | MS.gene58198:intron | 40.0% |
| ! | TCACGAAATGCAGAGTATTC+TGG | - | chr8.3:10769876-10769895 | None:intergenic | 40.0% |
| ! | TCATTCCCTGCTCATGTTTT+GGG | + | chr8.3:10769492-10769511 | MS.gene58198:intron | 40.0% |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr8.3:10768714-10768733 | MS.gene58198:intron | 40.0% |
| ! | TCCGTTGGAATTTTGTTAGC+AGG | + | chr8.3:10768045-10768064 | MS.gene58198:intron | 40.0% |
| ! | TTCATTCCCTGCTCATGTTT+TGG | + | chr8.3:10769491-10769510 | MS.gene58198:intron | 40.0% |
| ! | TTGTCTTGTTGAAGGACTTG+AGG | + | chr8.3:10767045-10767064 | MS.gene58198:CDS | 40.0% |
| !! | AAGGTTGATGTGATCTTTGC+TGG | + | chr8.3:10769435-10769454 | MS.gene58198:CDS | 40.0% |
| !! | AGTACACTGATGTTGGTTTG+CGG | + | chr8.3:10767661-10767680 | MS.gene58198:CDS | 40.0% |
| !! | CAATGATGATGGCAAGAAAG+TGG | + | chr8.3:10769962-10769981 | MS.gene58198:CDS | 40.0% |
| !! | CATGGAGTTGCATGCTATTT+TGG | + | chr8.3:10769528-10769547 | MS.gene58198:intron | 40.0% |
| AATTGTACATGACTGGACCC+TGG | - | chr8.3:10766935-10766954 | None:intergenic | 45.0% | |
| ACGCCTGATTGCATACCAAA+GGG | - | chr8.3:10768345-10768364 | None:intergenic | 45.0% | |
| ACTTTCGGGGAATACAAGTC+TGG | + | chr8.3:10767010-10767029 | MS.gene58198:CDS | 45.0% | |
| AGGAACCCAAAACATGAGCA+GGG | - | chr8.3:10769500-10769519 | None:intergenic | 45.0% | |
| ATCAGCACCTGTGTACATCA+CGG | + | chr8.3:10769699-10769718 | MS.gene58198:CDS | 45.0% | |
| ATTTGTCAGCTACGGGATAC+CGG | - | chr8.3:10769681-10769700 | None:intergenic | 45.0% | |
| CAGCCATGGATATGGAATAC+AGG | + | chr8.3:10767726-10767745 | MS.gene58198:CDS | 45.0% | |
| CATTTCGTGAAGCCAGCTAT+GGG | + | chr8.3:10769886-10769905 | MS.gene58198:CDS | 45.0% | |
| CCAAATTTGTAGGTGGCATC+TGG | - | chr8.3:10767356-10767375 | None:intergenic | 45.0% | |
| CCAGATGCCACCTACAAATT+TGG | + | chr8.3:10767353-10767372 | MS.gene58198:CDS | 45.0% | |
| CCAGCATTTGCAGTTCCTAA+GGG | + | chr8.3:10766302-10766321 | MS.gene58198:CDS | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr8.3:10768718-10768737 | None:intergenic | 45.0% | |
| CTCTAGTGCTCTACCATGTA+GGG | - | chr8.3:10767774-10767793 | None:intergenic | 45.0% | |
| GGAGAATCGATACTGAAAGC+AGG | - | chr8.3:10769629-10769648 | None:intergenic | 45.0% | |
| GGAGATGGAGGAAATCAAGA+AGG | + | chr8.3:10769724-10769743 | MS.gene58198:CDS | 45.0% | |
| GGGTCCAGTCATGTACAATT+TGG | + | chr8.3:10766935-10766954 | MS.gene58198:CDS | 45.0% | |
| GTACTCTTGGACGCCAAATA+AGG | - | chr8.3:10768317-10768336 | None:intergenic | 45.0% | |
| TCAATCTACTGCACAAGGCA+CGG | + | chr8.3:10766976-10766995 | MS.gene58198:CDS | 45.0% | |
| TCAGCAGAGATGTGTATGCA+GGG | + | chr8.3:10766222-10766241 | MS.gene58198:CDS | 45.0% | |
| TCCAGCATTTGCAGTTCCTA+AGG | + | chr8.3:10766301-10766320 | MS.gene58198:CDS | 45.0% | |
| TCTCTAGTGCTCTACCATGT+AGG | - | chr8.3:10767775-10767794 | None:intergenic | 45.0% | |
| TCTCTGAGCCATTTCCATTG+TGG | - | chr8.3:10769276-10769295 | None:intergenic | 45.0% | |
| TGAGGTGCATTATGTCCCTT+AGG | - | chr8.3:10766320-10766339 | None:intergenic | 45.0% | |
| TGCAACTCCATGTATTGTGC+AGG | - | chr8.3:10769520-10769539 | None:intergenic | 45.0% | |
| TGCATGAGAACAATGAGCCA+AGG | - | chr8.3:10769330-10769349 | None:intergenic | 45.0% | |
| TTAGTCATGTGATGCCGTAG+TGG | + | chr8.3:10769578-10769597 | MS.gene58198:intron | 45.0% | |
| TTCAGCAGAGATGTGTATGC+AGG | + | chr8.3:10766221-10766240 | MS.gene58198:CDS | 45.0% | |
| TTGGGTTCCTGCACAATACA+TGG | + | chr8.3:10769510-10769529 | MS.gene58198:intron | 45.0% | |
| ! | AATGCAGAGTATTCTGGCTG+AGG | - | chr8.3:10769870-10769889 | None:intergenic | 45.0% |
| ! | CCAGGAACATTTTATACCCG+GGG | + | chr8.3:10768716-10768735 | MS.gene58198:intron | 45.0% |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr8.3:10768715-10768734 | MS.gene58198:intron | 45.0% |
| ! | GGGTGTGAAGTTTTCAACAC+GGG | - | chr8.3:10768191-10768210 | None:intergenic | 45.0% |
| ! | GTCTTTTCCCTATCAACCTG+TGG | - | chr8.3:10769306-10769325 | None:intergenic | 45.0% |
| !! | AGGTGCTGATTTGTCAGCTA+CGG | - | chr8.3:10769689-10769708 | None:intergenic | 45.0% |
| !! | CATGGGCTCGATTTGTTGAA+AGG | + | chr8.3:10767691-10767710 | MS.gene58198:CDS | 45.0% |
| CACGCCTGATTGCATACCAA+AGG | - | chr8.3:10768346-10768365 | None:intergenic | 50.0% | |
| CACTGGAACCGCAATGATGA+TGG | + | chr8.3:10769951-10769970 | MS.gene58198:CDS | 50.0% | |
| CAGCGTATCAGCCATGGATA+TGG | + | chr8.3:10767718-10767737 | MS.gene58198:CDS | 50.0% | |
| CAGGAACCCAAAACATGAGC+AGG | - | chr8.3:10769501-10769520 | None:intergenic | 50.0% | |
| CATCATCATTGCGGTTCCAG+TGG | - | chr8.3:10769953-10769972 | None:intergenic | 50.0% | |
| CCCCGGGTATAAAATGTTCC+TGG | - | chr8.3:10768719-10768738 | None:intergenic | 50.0% | |
| CCCTTAGGAACTGCAAATGC+TGG | - | chr8.3:10766305-10766324 | None:intergenic | 50.0% | |
| CGCCTGATTGCATACCAAAG+GGG | - | chr8.3:10768344-10768363 | None:intergenic | 50.0% | |
| CTTGGACGCCAAATAAGGAG+TGG | - | chr8.3:10768312-10768331 | None:intergenic | 50.0% | |
| GAACACATGCTGTCTACCAC+TGG | + | chr8.3:10769934-10769953 | MS.gene58198:CDS | 50.0% | |
| GCATCTGGTCCAACTTTAGG+AGG | - | chr8.3:10767341-10767360 | None:intergenic | 50.0% | |
| GCATTTCGTGAAGCCAGCTA+TGG | + | chr8.3:10769885-10769904 | MS.gene58198:CDS | 50.0% | |
| GCCTGATTGCATACCAAAGG+GGG | - | chr8.3:10768343-10768362 | None:intergenic | 50.0% | |
| GGGTGGCAATAAAGTTCCCA+TGG | - | chr8.3:10768670-10768689 | None:intergenic | 50.0% | |
| GTGGCATCTGGTCCAACTTT+AGG | - | chr8.3:10767344-10767363 | None:intergenic | 50.0% | |
| TGCGAGTGGTTTACGAAAGC+TGG | + | chr8.3:10769400-10769419 | MS.gene58198:CDS | 50.0% | |
| ! | TGGTTTGCGGTGGGATACAT+GGG | + | chr8.3:10767674-10767693 | MS.gene58198:CDS | 50.0% |
| !! | ACACTGATGTTGGTTTGCGG+TGG | + | chr8.3:10767664-10767683 | MS.gene58198:CDS | 50.0% |
| !! | ATGAGCTGCCACAGGTTGAT+AGG | + | chr8.3:10769295-10769314 | MS.gene58198:CDS | 50.0% |
| !! | CACTGATGTTGGTTTGCGGT+GGG | + | chr8.3:10767665-10767684 | MS.gene58198:CDS | 50.0% |
| !! | GGTGCTGATTTGTCAGCTAC+GGG | - | chr8.3:10769688-10769707 | None:intergenic | 50.0% |
| !! | TGAGCTGCCACAGGTTGATA+GGG | + | chr8.3:10769296-10769315 | MS.gene58198:CDS | 50.0% |
| !! | TTGGTTTGCGGTGGGATACA+TGG | + | chr8.3:10767673-10767692 | MS.gene58198:CDS | 50.0% |
| ACTGGACCCTGGTTCATCTG+GGG | - | chr8.3:10766924-10766943 | None:intergenic | 55.0% | |
| AGTCTAGCACTTGCTCCCCA+AGG | - | chr8.3:10769024-10769043 | None:intergenic | 55.0% | |
| GACTGGACCCTGGTTCATCT+GGG | - | chr8.3:10766925-10766944 | None:intergenic | 55.0% | |
| GATTGCATACCAAAGGGGGC+TGG | - | chr8.3:10768339-10768358 | None:intergenic | 55.0% | |
| GCACCTGTGTACATCACGGT+CGG | + | chr8.3:10769703-10769722 | MS.gene58198:CDS | 55.0% | |
| GCCCCCTTTGGTATGCAATC+AGG | + | chr8.3:10768339-10768358 | MS.gene58198:CDS | 55.0% | |
| GGAGTACAGCGTATCAGCCA+TGG | + | chr8.3:10767712-10767731 | MS.gene58198:CDS | 55.0% | |
| GTGTACATCACGGTCGGAGA+TGG | + | chr8.3:10769709-10769728 | MS.gene58198:CDS | 55.0% | |
| TACATCACGGTCGGAGATGG+AGG | + | chr8.3:10769712-10769731 | MS.gene58198:CDS | 55.0% | |
| TCTCCGACCGTGATGTACAC+AGG | - | chr8.3:10769709-10769728 | None:intergenic | 55.0% | |
| TGACTGGACCCTGGTTCATC+TGG | - | chr8.3:10766926-10766945 | None:intergenic | 55.0% | |
| ! | GGAAGGTGAAAGCATGCGAG+TGG | + | chr8.3:10769386-10769405 | MS.gene58198:CDS | 55.0% |
| CAGCTATGGGCACTCCACGT+TGG | + | chr8.3:10769899-10769918 | MS.gene58198:CDS | 60.0% | |
| GCTCAGAGATGAGCTGCCAC+AGG | + | chr8.3:10769287-10769306 | MS.gene58198:CDS | 60.0% | |
| GGGTGACCCCAGATGAACCA+GGG | + | chr8.3:10766915-10766934 | MS.gene58198:CDS | 60.0% | |
| TGGGTGACCCCAGATGAACC+AGG | + | chr8.3:10766914-10766933 | MS.gene58198:CDS | 60.0% | |
| ! | CAACGTGGAGTGCCCATAGC+TGG | - | chr8.3:10769901-10769920 | None:intergenic | 60.0% |
| ! | CCAAAGGGGGCTGGTACTCT+TGG | - | chr8.3:10768330-10768349 | None:intergenic | 60.0% |
| !! | CCAAGAGTACCAGCCCCCTT+TGG | + | chr8.3:10768327-10768346 | MS.gene58198:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10766173 | 10770018 | 10766173 | ID=MS.gene58198 |
| chr8.3 | mRNA | 10766173 | 10770018 | 10766173 | ID=MS.gene58198.t1;Parent=MS.gene58198 |
| chr8.3 | exon | 10766173 | 10766343 | 10766173 | ID=MS.gene58198.t1.exon1;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10766173 | 10766343 | 10766173 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10766866 | 10767066 | 10766866 | ID=MS.gene58198.t1.exon2;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10766866 | 10767066 | 10766866 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10767272 | 10767383 | 10767272 | ID=MS.gene58198.t1.exon3;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10767272 | 10767383 | 10767272 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10767553 | 10767779 | 10767553 | ID=MS.gene58198.t1.exon4;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10767553 | 10767779 | 10767553 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10768269 | 10768407 | 10768269 | ID=MS.gene58198.t1.exon5;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10768269 | 10768407 | 10768269 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10769262 | 10769482 | 10769262 | ID=MS.gene58198.t1.exon6;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10769262 | 10769482 | 10769262 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10769637 | 10769758 | 10769637 | ID=MS.gene58198.t1.exon7;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10769637 | 10769758 | 10769637 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| chr8.3 | exon | 10769857 | 10770018 | 10769857 | ID=MS.gene58198.t1.exon8;Parent=MS.gene58198.t1 |
| chr8.3 | CDS | 10769857 | 10770018 | 10769857 | ID=cds.MS.gene58198.t1;Parent=MS.gene58198.t1 |
| Gene Sequence |
| Protein sequence |
