Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58221.t1 | AFK47719.1 | 98 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 5.10E-266 | 926.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58221.t1 | Q949Y3 | 78.0 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 2.1e-220 | 766.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58221.t1 | I3T5C7 | 98.0 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 3.7e-266 | 926.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene54918 | MS.gene58221 | PPI |
| MS.gene72586 | MS.gene58221 | PPI |
| MS.gene91456 | MS.gene58221 | PPI |
| MS.gene91457 | MS.gene58221 | PPI |
| MS.gene74939 | MS.gene58221 | PPI |
| MS.gene029291 | MS.gene58221 | PPI |
| MS.gene037272 | MS.gene58221 | PPI |
| MS.gene72585 | MS.gene58221 | PPI |
| MS.gene58221 | MS.gene54917 | PPI |
| MS.gene83724 | MS.gene58221 | PPI |
| MS.gene065024 | MS.gene58221 | PPI |
| MS.gene58221 | MS.gene83723 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58221.t1 | MTR_4g115670 | 98.004 | 451 | 9 | 0 | 1 | 451 | 1 | 451 | 0.0 | 918 |
| MS.gene58221.t1 | MTR_0188s0020 | 61.682 | 428 | 161 | 2 | 26 | 451 | 32 | 458 | 0.0 | 556 |
| MS.gene58221.t1 | MTR_4g037105 | 60.789 | 431 | 166 | 2 | 23 | 451 | 23 | 452 | 0.0 | 553 |
| MS.gene58221.t1 | MTR_1g112630 | 60.648 | 432 | 166 | 3 | 23 | 451 | 24 | 454 | 0.0 | 546 |
| MS.gene58221.t1 | MTR_3g051240 | 43.367 | 392 | 195 | 7 | 55 | 445 | 43 | 408 | 2.51e-101 | 309 |
| MS.gene58221.t1 | MTR_5g092360 | 41.872 | 406 | 209 | 7 | 41 | 445 | 35 | 414 | 1.42e-99 | 305 |
| MS.gene58221.t1 | MTR_7g104360 | 41.832 | 404 | 206 | 9 | 48 | 447 | 38 | 416 | 2.95e-98 | 301 |
| MS.gene58221.t1 | MTR_1g060360 | 43.257 | 393 | 198 | 8 | 55 | 446 | 46 | 414 | 1.68e-96 | 297 |
| MS.gene58221.t1 | MTR_7g104330 | 41.919 | 396 | 202 | 8 | 50 | 443 | 49 | 418 | 5.82e-96 | 296 |
| MS.gene58221.t1 | MTR_6g013050 | 34.864 | 479 | 223 | 11 | 36 | 439 | 52 | 516 | 7.59e-77 | 251 |
| MS.gene58221.t1 | MTR_3g083810 | 34.350 | 492 | 231 | 12 | 36 | 450 | 52 | 528 | 1.02e-72 | 239 |
| MS.gene58221.t1 | MTR_6g013050 | 34.490 | 461 | 213 | 11 | 36 | 421 | 52 | 498 | 4.91e-71 | 234 |
| MS.gene58221.t1 | MTR_7g056403 | 32.653 | 490 | 238 | 11 | 38 | 450 | 53 | 527 | 4.11e-69 | 229 |
| MS.gene58221.t1 | MTR_3g083820 | 33.943 | 492 | 233 | 12 | 36 | 450 | 52 | 528 | 4.63e-69 | 229 |
| MS.gene58221.t1 | MTR_4g037670 | 28.998 | 469 | 242 | 22 | 14 | 435 | 189 | 613 | 1.20e-33 | 134 |
| MS.gene58221.t1 | MTR_1g052505 | 28.235 | 425 | 228 | 18 | 14 | 390 | 167 | 562 | 1.18e-32 | 130 |
| MS.gene58221.t1 | MTR_3g074930 | 26.696 | 457 | 267 | 18 | 42 | 451 | 170 | 605 | 2.88e-26 | 112 |
| MS.gene58221.t1 | MTR_3g074930 | 26.551 | 403 | 250 | 13 | 81 | 451 | 224 | 612 | 4.17e-26 | 111 |
| MS.gene58221.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 67 | 532 | 3.32e-24 | 105 |
| MS.gene58221.t1 | MTR_4g103520 | 25.820 | 488 | 298 | 18 | 6 | 451 | 144 | 609 | 4.91e-24 | 105 |
| MS.gene58221.t1 | MTR_8g063080 | 25.785 | 446 | 266 | 19 | 53 | 451 | 167 | 594 | 5.54e-24 | 105 |
| MS.gene58221.t1 | MTR_4g082930 | 24.276 | 449 | 258 | 18 | 54 | 438 | 143 | 573 | 2.95e-22 | 100 |
| MS.gene58221.t1 | MTR_5g045600 | 26.685 | 371 | 226 | 13 | 113 | 451 | 245 | 601 | 9.88e-22 | 98.6 |
| MS.gene58221.t1 | MTR_3g074970 | 25.282 | 443 | 246 | 15 | 42 | 451 | 119 | 509 | 2.04e-21 | 97.1 |
| MS.gene58221.t1 | MTR_4g082940 | 22.864 | 433 | 268 | 18 | 55 | 438 | 144 | 559 | 5.30e-15 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58221.t1 | AT5G34850 | 78.049 | 451 | 98 | 1 | 1 | 451 | 1 | 450 | 0.0 | 754 |
| MS.gene58221.t1 | AT2G27190 | 59.603 | 453 | 177 | 3 | 1 | 451 | 9 | 457 | 0.0 | 550 |
| MS.gene58221.t1 | AT2G16430 | 57.399 | 446 | 187 | 2 | 8 | 451 | 12 | 456 | 0.0 | 532 |
| MS.gene58221.t1 | AT4G36350 | 55.677 | 458 | 188 | 7 | 1 | 451 | 3 | 452 | 1.77e-177 | 505 |
| MS.gene58221.t1 | AT1G56360 | 55.044 | 456 | 192 | 7 | 5 | 451 | 1 | 452 | 2.45e-177 | 504 |
| MS.gene58221.t1 | AT2G18130 | 51.542 | 454 | 190 | 7 | 5 | 451 | 3 | 433 | 7.70e-151 | 436 |
| MS.gene58221.t1 | AT2G16430 | 61.027 | 331 | 126 | 2 | 123 | 451 | 7 | 336 | 1.80e-148 | 427 |
| MS.gene58221.t1 | AT3G46120 | 44.760 | 458 | 162 | 13 | 5 | 451 | 3 | 380 | 4.21e-114 | 340 |
| MS.gene58221.t1 | AT3G20500 | 42.643 | 401 | 203 | 7 | 50 | 449 | 42 | 416 | 2.53e-102 | 312 |
| MS.gene58221.t1 | AT3G52820 | 41.985 | 393 | 204 | 7 | 55 | 447 | 47 | 415 | 5.15e-96 | 296 |
| MS.gene58221.t1 | AT3G52810 | 40.136 | 441 | 226 | 12 | 1 | 436 | 1 | 408 | 1.46e-94 | 292 |
| MS.gene58221.t1 | AT3G52780 | 42.172 | 396 | 203 | 8 | 55 | 447 | 44 | 416 | 3.87e-93 | 288 |
| MS.gene58221.t1 | AT1G52940 | 54.202 | 238 | 103 | 5 | 46 | 279 | 6 | 241 | 1.98e-81 | 251 |
| MS.gene58221.t1 | AT4G13700 | 34.889 | 407 | 210 | 11 | 36 | 401 | 45 | 437 | 7.10e-69 | 226 |
| MS.gene58221.t1 | AT3G07130 | 33.778 | 450 | 216 | 9 | 67 | 450 | 85 | 518 | 8.02e-69 | 228 |
| MS.gene58221.t1 | AT2G32770 | 31.263 | 499 | 239 | 13 | 38 | 448 | 51 | 533 | 1.03e-64 | 218 |
| MS.gene58221.t1 | AT3G52780 | 40.656 | 305 | 166 | 7 | 55 | 356 | 44 | 336 | 5.09e-63 | 208 |
| MS.gene58221.t1 | AT3G07130 | 31.356 | 472 | 231 | 9 | 67 | 450 | 85 | 551 | 1.13e-62 | 213 |
| MS.gene58221.t1 | AT4G13700 | 33.148 | 359 | 196 | 9 | 36 | 353 | 45 | 400 | 1.31e-56 | 193 |
| MS.gene58221.t1 | AT2G32770 | 32.454 | 379 | 179 | 7 | 107 | 421 | 62 | 427 | 2.32e-54 | 187 |
| MS.gene58221.t1 | AT2G32770 | 28.858 | 499 | 222 | 14 | 38 | 448 | 51 | 504 | 1.78e-51 | 182 |
| MS.gene58221.t1 | AT1G13750 | 26.455 | 378 | 232 | 13 | 106 | 451 | 232 | 595 | 1.21e-23 | 104 |
| MS.gene58221.t1 | AT5G50400 | 25.000 | 488 | 304 | 17 | 5 | 451 | 55 | 521 | 2.15e-23 | 103 |
| MS.gene58221.t1 | AT5G50400 | 26.596 | 376 | 234 | 13 | 106 | 451 | 230 | 593 | 2.20e-23 | 103 |
| MS.gene58221.t1 | AT4G24890 | 25.543 | 368 | 234 | 13 | 113 | 451 | 241 | 597 | 1.10e-20 | 95.5 |
| MS.gene58221.t1 | AT1G13900 | 26.804 | 388 | 212 | 18 | 103 | 438 | 203 | 570 | 1.31e-20 | 95.1 |
| MS.gene58221.t1 | AT2G03450 | 25.166 | 453 | 249 | 21 | 53 | 438 | 141 | 570 | 1.14e-18 | 89.4 |
Find 119 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGATATACCACTCCTTATT+TGG | 0.124320 | 8.3:+10748252 | MS.gene58221:CDS |
| CCAGATGCCACCTACAAATT+TGG | 0.149906 | 8.3:+10747304 | MS.gene58221:CDS |
| CAGTAATGAAGCTCACTTTA+TGG | 0.198207 | 8.3:+10749316 | MS.gene58221:CDS |
| CGGTTTCAAATTACACTTTC+GGG | 0.223069 | 8.3:+10746947 | MS.gene58221:CDS |
| GTGATTCTTCTCGAGAATTT+TGG | 0.264384 | 8.3:+10747257 | MS.gene58221:CDS |
| TGACTGGACCCTGGTTCATC+TGG | 0.265537 | 8.3:-10746874 | None:intergenic |
| TGTTATGTTGTAATCTATAT+TGG | 0.270249 | 8.3:-10749598 | None:intergenic |
| GCTCAAACTGTTCTATTTGT+TGG | 0.306088 | 8.3:+10747563 | MS.gene58221:CDS |
| TTATTGGTCGTGAAGGTTTA+GGG | 0.329889 | 8.3:+10749793 | MS.gene58221:intron |
| TCACGAAATGCAGAGTATTC+TGG | 0.330065 | 8.3:-10749824 | None:intergenic |
| ACTAAATACTACTACAGAAT+TGG | 0.331165 | 8.3:+10747229 | MS.gene58221:CDS |
| GTACTCTTGGACGCCAAATA+AGG | 0.334148 | 8.3:-10748265 | None:intergenic |
| ACCTACAAATTTGGGATCAT+TGG | 0.339885 | 8.3:+10747313 | MS.gene58221:CDS |
| ATGAGCTGCCACAGGTTGAT+AGG | 0.342674 | 8.3:+10749246 | MS.gene58221:CDS |
| GTGGCATCTGGTCCAACTTT+AGG | 0.343540 | 8.3:-10747292 | None:intergenic |
| TATCTACATTTCAGGTGATC+TGG | 0.362894 | 8.3:+10747490 | MS.gene58221:intron |
| ATCAAGAAGGTCTTGCTTCT+AGG | 0.366011 | 8.3:+10749688 | MS.gene58221:CDS |
| CAGCGTATCAGCCATGGATA+TGG | 0.377763 | 8.3:+10747669 | MS.gene58221:CDS |
| AAGGTTGATGTGATCTTTGC+TGG | 0.378443 | 8.3:+10749386 | MS.gene58221:CDS |
| TTATCCAGCTATTCTCCATT+TGG | 0.379906 | 8.3:+10748337 | MS.gene58221:CDS |
| TTGGTTTGCGGTGGGATACA+TGG | 0.381344 | 8.3:+10747624 | MS.gene58221:CDS |
| GACTGGACCCTGGTTCATCT+GGG | 0.388808 | 8.3:-10746873 | None:intergenic |
| ATTCATCATTGTCTTGTTGA+AGG | 0.390644 | 8.3:+10746988 | MS.gene58221:CDS |
| CCAAATTTGTAGGTGGCATC+TGG | 0.391166 | 8.3:-10747304 | None:intergenic |
| CAGATGCCACCTACAAATTT+GGG | 0.397664 | 8.3:+10747305 | MS.gene58221:CDS |
| TGAAGTGAACCTACCAATAC+TGG | 0.408402 | 8.3:-10749961 | None:intergenic |
| GGGTCCAGTCATGTACAATT+TGG | 0.411196 | 8.3:+10746886 | MS.gene58221:CDS |
| GAGATCTTTCTTATGCTGAT+AGG | 0.430471 | 8.3:+10747585 | MS.gene58221:CDS |
| TGCGAGTGGTTTACGAAAGC+TGG | 0.433609 | 8.3:+10749351 | MS.gene58221:CDS |
| ACGGTTTCAAATTACACTTT+CGG | 0.440557 | 8.3:+10746946 | MS.gene58221:CDS |
| AGTACACACCACAATGGAAA+TGG | 0.441734 | 8.3:+10749216 | MS.gene58221:CDS |
| TCCAGCATTTGCAGTTCCTA+AGG | 0.443867 | 8.3:+10746252 | MS.gene58221:CDS |
| ACCAATGATCCCAAATTTGT+AGG | 0.446529 | 8.3:-10747314 | None:intergenic |
| AAACCATACCGATCTTTCAT+AGG | 0.450195 | 8.3:-10749420 | None:intergenic |
| TTCAGCAGAGATGTGTATGC+AGG | 0.453445 | 8.3:+10746172 | MS.gene58221:CDS |
| CAACGTGGAGTGCCCATAGC+TGG | 0.454170 | 8.3:-10749849 | None:intergenic |
| CCCTTAGGAACTGCAAATGC+TGG | 0.455633 | 8.3:-10746253 | None:intergenic |
| TGAGGTGCATTATGTCCCTT+AGG | 0.458007 | 8.3:-10746268 | None:intergenic |
| ACAACATAACAACTGGTAAC+CGG | 0.458101 | 8.3:+10749610 | MS.gene58221:CDS |
| ATAGATTACAACATAACAAC+TGG | 0.461994 | 8.3:+10749603 | MS.gene58221:CDS |
| GCATTTCGTGAAGCCAGCTA+TGG | 0.469744 | 8.3:+10749836 | MS.gene58221:CDS |
| GTTACCAAATGGAGAATAGC+TGG | 0.473944 | 8.3:-10748341 | None:intergenic |
| CACTGGAACCGCAATGATGA+TGG | 0.473973 | 8.3:+10749902 | MS.gene58221:CDS |
| TTTGAAACACCTCCTAAAGT+TGG | 0.482762 | 8.3:+10747280 | MS.gene58221:CDS |
| ACTTTCGGGGAATACAAGTC+TGG | 0.489018 | 8.3:+10746961 | MS.gene58221:CDS |
| CATGGGCTCGATTTGTTGAA+AGG | 0.490455 | 8.3:+10747642 | MS.gene58221:CDS |
| ATCTACATTTCAGGTGATCT+GGG | 0.492376 | 8.3:+10747491 | MS.gene58221:intron |
| CTCTAGTGCTCTACCATGTA+GGG | 0.493891 | 8.3:-10747722 | None:intergenic |
| CAGCCATGGATATGGAATAC+AGG | 0.494179 | 8.3:+10747677 | MS.gene58221:CDS |
| AGTGGTATATCGTTGAAGAT+AGG | 0.499275 | 8.3:-10748242 | None:intergenic |
| TCTCTAGTGCTCTACCATGT+AGG | 0.502444 | 8.3:-10747723 | None:intergenic |
| ATTTGTCAGCTACGGGATAC+CGG | 0.505552 | 8.3:-10749629 | None:intergenic |
| GAAAAGCAGTAATCATCTCA+TGG | 0.507583 | 8.3:+10746845 | MS.gene58221:CDS |
| TCGTATTGCATAACCAGTAT+TGG | 0.514437 | 8.3:+10749948 | MS.gene58221:CDS |
| GCAAATGCTGGATGATTAAG+TGG | 0.518212 | 8.3:-10746241 | None:intergenic |
| ACGCCTGATTGCATACCAAA+GGG | 0.530829 | 8.3:-10748293 | None:intergenic |
| AATAGAGTACTTTCCCTACA+TGG | 0.530906 | 8.3:+10747709 | MS.gene58221:CDS |
| TAAGAAATACATACTTGTTG+AGG | 0.531408 | 8.3:-10746286 | None:intergenic |
| AGGTGCTGATTTGTCAGCTA+CGG | 0.538709 | 8.3:-10749637 | None:intergenic |
| TTGTCTTGTTGAAGGACTTG+AGG | 0.540359 | 8.3:+10746996 | MS.gene58221:CDS |
| GTGTACATCACGGTCGGAGA+TGG | 0.540371 | 8.3:+10749660 | MS.gene58221:CDS |
| ATCACACAAGGTGATTATGA+TGG | 0.540793 | 8.3:+10746823 | MS.gene58221:CDS |
| TCAATCTACTGCACAAGGCA+CGG | 0.543185 | 8.3:+10746927 | MS.gene58221:CDS |
| TCTCTGAGCCATTTCCATTG+TGG | 0.544206 | 8.3:-10749224 | None:intergenic |
| TGAGCTGCCACAGGTTGATA+GGG | 0.547830 | 8.3:+10749247 | MS.gene58221:CDS |
| GGTGCTGATTTGTCAGCTAC+GGG | 0.549793 | 8.3:-10749636 | None:intergenic |
| CAATGATGATGGCAAGAAAG+TGG | 0.559117 | 8.3:+10749913 | MS.gene58221:CDS |
| CATTTCGTGAAGCCAGCTAT+GGG | 0.559509 | 8.3:+10749837 | MS.gene58221:CDS |
| TTTCCTGTATTCCATATCCA+TGG | 0.562078 | 8.3:-10747680 | None:intergenic |
| CGTTGAAGATAGGACTTGAA+AGG | 0.566750 | 8.3:-10748232 | None:intergenic |
| GAACACATGCTGTCTACCAC+TGG | 0.567046 | 8.3:+10749885 | MS.gene58221:CDS |
| CCAGCATTTGCAGTTCCTAA+GGG | 0.567845 | 8.3:+10746253 | MS.gene58221:CDS |
| CACGCCTGATTGCATACCAA+AGG | 0.568929 | 8.3:-10748294 | None:intergenic |
| GCTCAGAGATGAGCTGCCAC+AGG | 0.569548 | 8.3:+10749238 | MS.gene58221:CDS |
| GCATCTGGTCCAACTTTAGG+AGG | 0.569812 | 8.3:-10747289 | None:intergenic |
| TGGGTGACCCCAGATGAACC+AGG | 0.573846 | 8.3:+10746865 | MS.gene58221:CDS |
| AGTACACTGATGTTGGTTTG+CGG | 0.573861 | 8.3:+10747612 | MS.gene58221:CDS |
| AGGTATCAGTACACTGATGT+TGG | 0.576726 | 8.3:+10747605 | MS.gene58221:CDS |
| GGAGTACAGCGTATCAGCCA+TGG | 0.578522 | 8.3:+10747663 | MS.gene58221:CDS |
| CTCTATATAGTGCTCAAGAG+TGG | 0.578714 | 8.3:-10747534 | None:intergenic |
| TACATCACGGTCGGAGATGG+AGG | 0.579269 | 8.3:+10749663 | MS.gene58221:CDS |
| TCAGCAGAGATGTGTATGCA+GGG | 0.579504 | 8.3:+10746173 | MS.gene58221:CDS |
| CTTTCTTGCCATCATCATTG+CGG | 0.582581 | 8.3:-10749910 | None:intergenic |
| TACTACTACAGAATTGGAAG+TGG | 0.583196 | 8.3:+10747235 | MS.gene58221:CDS |
| AATGCAGAGTATTCTGGCTG+AGG | 0.586901 | 8.3:-10749818 | None:intergenic |
| TGGTTTGCGGTGGGATACAT+GGG | 0.588603 | 8.3:+10747625 | MS.gene58221:CDS |
| CACTGATGTTGGTTTGCGGT+GGG | 0.590870 | 8.3:+10747616 | MS.gene58221:CDS |
| ACTGGACCCTGGTTCATCTG+GGG | 0.591269 | 8.3:-10746872 | None:intergenic |
| TGTGCCAAATTGTACATGAC+TGG | 0.592331 | 8.3:-10746890 | None:intergenic |
| TGTTCATGCCTATGAAAGAT+CGG | 0.594706 | 8.3:+10749412 | MS.gene58221:CDS |
| AAAAGCAGTAATCATCTCAT+GGG | 0.596532 | 8.3:+10746846 | MS.gene58221:CDS |
| TTAAGTGGAATATCAACAGA+TGG | 0.596627 | 8.3:-10746226 | None:intergenic |
| CATCATCATTGCGGTTCCAG+TGG | 0.598630 | 8.3:-10749901 | None:intergenic |
| ATCTTTCATAGGCATGAACA+TGG | 0.603823 | 8.3:-10749409 | None:intergenic |
| AAGAAAATAGAAAGATGCAG+AGG | 0.605085 | 8.3:+10746110 | None:intergenic |
| ACACTGATGTTGGTTTGCGG+TGG | 0.606840 | 8.3:+10747615 | MS.gene58221:CDS |
| AATATCAACAGATGGAAACT+CGG | 0.608614 | 8.3:-10746218 | None:intergenic |
| AATGAAGCTCACTTTATGGA+AGG | 0.608755 | 8.3:+10749320 | MS.gene58221:CDS |
| GCCTGATTGCATACCAAAGG+GGG | 0.618674 | 8.3:-10748291 | None:intergenic |
| AAGCTGGTTCATCAAGTACA+AGG | 0.625171 | 8.3:+10749367 | MS.gene58221:CDS |
| GGTTTCAAATTACACTTTCG+GGG | 0.626128 | 8.3:+10746948 | MS.gene58221:CDS |
| TCTCCGACCGTGATGTACAC+AGG | 0.629591 | 8.3:-10749657 | None:intergenic |
| TGCATGAGAACAATGAGCCA+AGG | 0.630461 | 8.3:-10749278 | None:intergenic |
| GGAGATGGAGGAAATCAAGA+AGG | 0.639359 | 8.3:+10749675 | MS.gene58221:CDS |
| TTGATAGGGAAAAGACACCT+TGG | 0.640827 | 8.3:+10749261 | MS.gene58221:CDS |
| GGAAGGTGAAAGCATGCGAG+TGG | 0.643581 | 8.3:+10749337 | MS.gene58221:CDS |
| AAATTTCAATCTACTGCACA+AGG | 0.649428 | 8.3:+10746922 | MS.gene58221:CDS |
| CAGTAAAGTACACACCACAA+TGG | 0.656235 | 8.3:+10749210 | MS.gene58221:intron |
| CGCCTGATTGCATACCAAAG+GGG | 0.656819 | 8.3:-10748292 | None:intergenic |
| GCACCTGTGTACATCACGGT+CGG | 0.660426 | 8.3:+10749654 | MS.gene58221:CDS |
| CAGCTATGGGCACTCCACGT+TGG | 0.662828 | 8.3:+10749850 | MS.gene58221:CDS |
| ATCAGCACCTGTGTACATCA+CGG | 0.663406 | 8.3:+10749650 | MS.gene58221:CDS |
| AATGATCCCAAATTTGTAGG+TGG | 0.663512 | 8.3:-10747311 | None:intergenic |
| AATTGTACATGACTGGACCC+TGG | 0.667509 | 8.3:-10746883 | None:intergenic |
| CTTGGACGCCAAATAAGGAG+TGG | 0.681481 | 8.3:-10748260 | None:intergenic |
| GGGTGACCCCAGATGAACCA+GGG | 0.686729 | 8.3:+10746866 | MS.gene58221:CDS |
| TTGTAGGTGCATATCACACA+AGG | 0.690964 | 8.3:+10746811 | MS.gene58221:intron |
| GCTTCATTACTGTTGTAGAG+CGG | 0.703187 | 8.3:-10749305 | None:intergenic |
| GTTATGCAATACGAATGAGT+CGG | 0.728481 | 8.3:-10749939 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATATATACTTCAATAAA+AGG | - | chr8.3:10749127-10749146 | None:intergenic | 15.0% |
| !! | ATAAAAATAGGGATTATAAT+AGG | + | chr8.3:10748568-10748587 | MS.gene58221:intron | 15.0% |
| !! | GTATTTAGAAAAAATATGTT+TGG | + | chr8.3:10748519-10748538 | MS.gene58221:intron | 15.0% |
| !! | TATTAATATTTCTTACATGT+TGG | + | chr8.3:10748384-10748403 | MS.gene58221:intron | 15.0% |
| !!! | ATATTCTTTTACATAAACTT+AGG | + | chr8.3:10748416-10748435 | MS.gene58221:intron | 15.0% |
| !!! | TATTATAATCCCTATTTTTA+TGG | - | chr8.3:10748569-10748588 | None:intergenic | 15.0% |
| !!! | TATTCTTTTACATAAACTTA+GGG | + | chr8.3:10748417-10748436 | MS.gene58221:intron | 15.0% |
| !!! | TTGTGTATTTATTTATTTTC+TGG | + | chr8.3:10747752-10747771 | MS.gene58221:intron | 15.0% |
| !! | AAAAAATTTCCCAAAGAAAA+GGG | - | chr8.3:10748641-10748660 | None:intergenic | 20.0% |
| !! | AAGTGAAATAATTTCAAAAG+TGG | + | chr8.3:10747079-10747098 | MS.gene58221:intron | 20.0% |
| !! | AAGTTATATTTGTTTATTCC+TGG | - | chr8.3:10748749-10748768 | None:intergenic | 20.0% |
| !! | AGTTATATTTGTTTATTCCT+GGG | - | chr8.3:10748748-10748767 | None:intergenic | 20.0% |
| !! | ATAAGTGATCAATATTCAAT+AGG | - | chr8.3:10748883-10748902 | None:intergenic | 20.0% |
| !! | ATATATACTTCAATAAAAGG+TGG | - | chr8.3:10749124-10749143 | None:intergenic | 20.0% |
| !! | GTTAACTTTATAATATTCCT+AGG | + | chr8.3:10748541-10748560 | MS.gene58221:intron | 20.0% |
| !! | TAGTAAATTGTAACAAACAT+AGG | + | chr8.3:10748698-10748717 | MS.gene58221:intron | 20.0% |
| !! | TGTTATGTTGTAATCTATAT+TGG | - | chr8.3:10749601-10749620 | None:intergenic | 20.0% |
| !!! | AAATATAAATTTTCTACCAC+TGG | - | chr8.3:10746680-10746699 | None:intergenic | 20.0% |
| !!! | AATTTACTAAATTTTATCCC+CGG | - | chr8.3:10748687-10748706 | None:intergenic | 20.0% |
| !!! | CATATTTTTTCTAAATACCT+TGG | - | chr8.3:10748517-10748536 | None:intergenic | 20.0% |
| !!! | CTAGATACAATTATTCATTT+TGG | - | chr8.3:10747470-10747489 | None:intergenic | 20.0% |
| !!! | TCTAACTTTTATGTTTTAGT+TGG | + | chr8.3:10748825-10748844 | MS.gene58221:intron | 20.0% |
| ! | AAATTATGATGTTATGCCTA+TGG | + | chr8.3:10746637-10746656 | MS.gene58221:intron | 25.0% |
| ! | AAGTACATTCTTATGTTTGT+AGG | + | chr8.3:10749016-10749035 | MS.gene58221:intron | 25.0% |
| ! | ACACTAATGTGATAAAATCT+TGG | - | chr8.3:10746757-10746776 | None:intergenic | 25.0% |
| ! | ACAGCTTATATGTTTATAAG+CGG | + | chr8.3:10746373-10746392 | MS.gene58221:intron | 25.0% |
| ! | ACTAAATACTACTACAGAAT+TGG | + | chr8.3:10747229-10747248 | MS.gene58221:CDS | 25.0% |
| ! | AGTTTACCAAATTTATTCCT+AGG | + | chr8.3:10748453-10748472 | MS.gene58221:intron | 25.0% |
| ! | ATAGATTACAACATAACAAC+TGG | + | chr8.3:10749603-10749622 | MS.gene58221:CDS | 25.0% |
| ! | ATTCCTTGGAATATAAAGAT+GGG | + | chr8.3:10748482-10748501 | MS.gene58221:intron | 25.0% |
| ! | GAAAAAATTTCCCAAAGAAA+AGG | - | chr8.3:10748642-10748661 | None:intergenic | 25.0% |
| ! | GTTATTCCTAGGAATAAATT+TGG | - | chr8.3:10748462-10748481 | None:intergenic | 25.0% |
| ! | TAACTTAATTCTGTTACAGA+TGG | + | chr8.3:10749711-10749730 | MS.gene58221:intron | 25.0% |
| ! | TAATGAATCTTTGATTCATC+AGG | + | chr8.3:10746328-10746347 | MS.gene58221:intron | 25.0% |
| ! | TACTAAAAGAAACTTCACAA+AGG | - | chr8.3:10748095-10748114 | None:intergenic | 25.0% |
| ! | TGTGTAACCTATAATAGAAA+GGG | - | chr8.3:10748162-10748181 | None:intergenic | 25.0% |
| ! | TTTCTCAAGAAATATCTTCT+AGG | - | chr8.3:10746600-10746619 | None:intergenic | 25.0% |
| !! | AGTTTCAGTTTTCACATTTT+TGG | + | chr8.3:10747802-10747821 | MS.gene58221:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr8.3:10746573-10746592 | MS.gene58221:intron | 25.0% |
| !! | ATTTACTAAATTTTATCCCC+GGG | - | chr8.3:10748686-10748705 | None:intergenic | 25.0% |
| !! | ATTTCTATCATTTTATTCCC+AGG | + | chr8.3:10748728-10748747 | MS.gene58221:intron | 25.0% |
| !! | TAAGAAATACATACTTGTTG+AGG | - | chr8.3:10746289-10746308 | None:intergenic | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | + | chr8.3:10746574-10746593 | MS.gene58221:intron | 25.0% |
| !!! | ATTGTTTTTCATGTAACCAT+AGG | - | chr8.3:10746656-10746675 | None:intergenic | 25.0% |
| AAAAGCAGTAATCATCTCAT+GGG | + | chr8.3:10746846-10746865 | MS.gene58221:CDS | 30.0% | |
| AAATGTGAAAACTGAAACTG+TGG | - | chr8.3:10747801-10747820 | None:intergenic | 30.0% | |
| AAATTCCAACGGAATGAAAA+CGG | - | chr8.3:10747989-10748008 | None:intergenic | 30.0% | |
| AAATTTCAATCTACTGCACA+AGG | + | chr8.3:10746922-10746941 | MS.gene58221:CDS | 30.0% | |
| AACACAAAGAAAAATGCGAA+CGG | - | chr8.3:10747161-10747180 | None:intergenic | 30.0% | |
| AACGATGAAAAAGATTATGC+AGG | - | chr8.3:10747354-10747373 | None:intergenic | 30.0% | |
| AAGCAAAAAGAAATCCTCAT+AGG | - | chr8.3:10747416-10747435 | None:intergenic | 30.0% | |
| AATATCAACAGATGGAAACT+CGG | - | chr8.3:10746221-10746240 | None:intergenic | 30.0% | |
| AATATTCAATAGGACGTCAA+AGG | - | chr8.3:10748873-10748892 | None:intergenic | 30.0% | |
| AATGATATGCTAAGAACCTA+GGG | - | chr8.3:10748784-10748803 | None:intergenic | 30.0% | |
| ACAAAACTACAGGAATAGAA+AGG | - | chr8.3:10747960-10747979 | None:intergenic | 30.0% | |
| ACGATGAAAAAGATTATGCA+GGG | - | chr8.3:10747353-10747372 | None:intergenic | 30.0% | |
| ACGGTTTCAAATTACACTTT+CGG | + | chr8.3:10746946-10746965 | MS.gene58221:CDS | 30.0% | |
| ATTCCCATCTTTATATTCCA+AGG | - | chr8.3:10748488-10748507 | None:intergenic | 30.0% | |
| CATTCCTTGGAATATAAAGA+TGG | + | chr8.3:10748481-10748500 | MS.gene58221:intron | 30.0% | |
| GATATAAATCTGCTTGATCA+GGG | + | chr8.3:10748199-10748218 | MS.gene58221:intron | 30.0% | |
| GTATCTAGTATCTACATTTC+AGG | + | chr8.3:10747482-10747501 | MS.gene58221:intron | 30.0% | |
| GTGTGTAACCTATAATAGAA+AGG | - | chr8.3:10748163-10748182 | None:intergenic | 30.0% | |
| TACATGAAAAACAATTCCAG+TGG | + | chr8.3:10746661-10746680 | MS.gene58221:intron | 30.0% | |
| TCATGCATAATACAGAGAAA+AGG | - | chr8.3:10747894-10747913 | None:intergenic | 30.0% | |
| TCCTAGGAACCATAAAAATA+GGG | + | chr8.3:10748557-10748576 | MS.gene58221:intron | 30.0% | |
| TCTTATGTTTGTAGGTCTAA+AGG | + | chr8.3:10749024-10749043 | MS.gene58221:intron | 30.0% | |
| TGAGGTAATTGTTTCAGATA+AGG | + | chr8.3:10747014-10747033 | MS.gene58221:intron | 30.0% | |
| TGATATAAATCTGCTTGATC+AGG | + | chr8.3:10748198-10748217 | MS.gene58221:intron | 30.0% | |
| TTAAGTGGAATATCAACAGA+TGG | - | chr8.3:10746229-10746248 | None:intergenic | 30.0% | |
| TTCCTAGGAACCATAAAAAT+AGG | + | chr8.3:10748556-10748575 | MS.gene58221:intron | 30.0% | |
| TTCTTCTTAACTACTATGTC+TGG | + | chr8.3:10747857-10747876 | MS.gene58221:intron | 30.0% | |
| ! | AAGATGGGAATTTTATTCCA+AGG | + | chr8.3:10748497-10748516 | MS.gene58221:intron | 30.0% |
| ! | ATTCATCATTGTCTTGTTGA+AGG | + | chr8.3:10746988-10747007 | MS.gene58221:CDS | 30.0% |
| ! | TAGCACTTTTGCTTGTATAT+GGG | - | chr8.3:10748929-10748948 | None:intergenic | 30.0% |
| ! | TGTTTTCATAGATGAAGCAT+AGG | - | chr8.3:10746356-10746375 | None:intergenic | 30.0% |
| ! | TTAGCACTTTTGCTTGTATA+TGG | - | chr8.3:10748930-10748949 | None:intergenic | 30.0% |
| !! | GCAGCGATTTATTATTTTAC+TGG | - | chr8.3:10747779-10747798 | None:intergenic | 30.0% |
| !! | GTCTCATGATTTTAATGATG+TGG | + | chr8.3:10747440-10747459 | MS.gene58221:intron | 30.0% |
| !! | GTGTTGTTTATTTCCATTGT+AGG | + | chr8.3:10746795-10746814 | MS.gene58221:intron | 30.0% |
| !! | TACATAAAGTATTGCCTATG+AGG | + | chr8.3:10747399-10747418 | MS.gene58221:intron | 30.0% |
| !!! | AGTTTTCACATTTTTGGCAT+TGG | + | chr8.3:10747808-10747827 | MS.gene58221:intron | 30.0% |
| !!! | GCACGTTTTAATTCTGTTAT+TGG | + | chr8.3:10749777-10749796 | MS.gene58221:intron | 30.0% |
| !!! | TCTATTTTTTATCTCCAACG+TGG | - | chr8.3:10749867-10749886 | None:intergenic | 30.0% |
| AAACCATACCGATCTTTCAT+AGG | - | chr8.3:10749423-10749442 | None:intergenic | 35.0% | |
| AAATTTCCCAAAGAAAAGGG+TGG | - | chr8.3:10748638-10748657 | None:intergenic | 35.0% | |
| AATAAAGTTCCCATGGAGAT+GGG | - | chr8.3:10748614-10748633 | None:intergenic | 35.0% | |
| AATGAAGCTCACTTTATGGA+AGG | + | chr8.3:10749320-10749339 | MS.gene58221:CDS | 35.0% | |
| AATGATCCCAAATTTGTAGG+TGG | - | chr8.3:10747314-10747333 | None:intergenic | 35.0% | |
| AATTCTGTTATTGGTCGTGA+AGG | + | chr8.3:10749786-10749805 | MS.gene58221:intron | 35.0% | |
| ACAACATAACAACTGGTAAC+CGG | + | chr8.3:10749610-10749629 | MS.gene58221:CDS | 35.0% | |
| ACCAATGATCCCAAATTTGT+AGG | - | chr8.3:10747317-10747336 | None:intergenic | 35.0% | |
| ACGATATACCACTCCTTATT+TGG | + | chr8.3:10748252-10748271 | MS.gene58221:CDS | 35.0% | |
| AGATGTTTACTTCTCTACCT+TGG | + | chr8.3:10748955-10748974 | MS.gene58221:intron | 35.0% | |
| AGTGGTATATCGTTGAAGAT+AGG | - | chr8.3:10748245-10748264 | None:intergenic | 35.0% | |
| ATCACACAAGGTGATTATGA+TGG | + | chr8.3:10746823-10746842 | MS.gene58221:CDS | 35.0% | |
| ATCTCTGCTGAAAAACACAA+AGG | - | chr8.3:10746164-10746183 | None:intergenic | 35.0% | |
| ATCTTTCATAGGCATGAACA+TGG | - | chr8.3:10749412-10749431 | None:intergenic | 35.0% | |
| ATGTTTACTTCTCTACCTTG+GGG | + | chr8.3:10748957-10748976 | MS.gene58221:intron | 35.0% | |
| CAATGATATGCTAAGAACCT+AGG | - | chr8.3:10748785-10748804 | None:intergenic | 35.0% | |
| CAGTAATGAAGCTCACTTTA+TGG | + | chr8.3:10749316-10749335 | MS.gene58221:CDS | 35.0% | |
| CGGTTTCAAATTACACTTTC+GGG | + | chr8.3:10746947-10746966 | MS.gene58221:CDS | 35.0% | |
| CTAGGTTCTTAGCATATCAT+TGG | + | chr8.3:10748783-10748802 | MS.gene58221:intron | 35.0% | |
| CTTCACACCCTTTCTATTAT+AGG | + | chr8.3:10748152-10748171 | MS.gene58221:intron | 35.0% | |
| CTTCAGCATAACATATGAAG+CGG | - | chr8.3:10748039-10748058 | None:intergenic | 35.0% | |
| GAAAAGCAGTAATCATCTCA+TGG | + | chr8.3:10746845-10746864 | MS.gene58221:CDS | 35.0% | |
| GAATTTATTCCCATCTCCAT+GGG | + | chr8.3:10748602-10748621 | MS.gene58221:intron | 35.0% | |
| GAGAAATGTGTATGCAATAG+TGG | + | chr8.3:10746614-10746633 | MS.gene58221:intron | 35.0% | |
| GAGAGTAGAATTATCATCAC+TGG | + | chr8.3:10747036-10747055 | MS.gene58221:intron | 35.0% | |
| GAGATCTTTCTTATGCTGAT+AGG | + | chr8.3:10747585-10747604 | MS.gene58221:CDS | 35.0% | |
| GATGTTTACTTCTCTACCTT+GGG | + | chr8.3:10748956-10748975 | MS.gene58221:intron | 35.0% | |
| GCTCAAACTGTTCTATTTGT+TGG | + | chr8.3:10747563-10747582 | MS.gene58221:CDS | 35.0% | |
| GGTTTCAAATTACACTTTCG+GGG | + | chr8.3:10746948-10746967 | MS.gene58221:CDS | 35.0% | |
| GTTATGCAATACGAATGAGT+CGG | - | chr8.3:10749942-10749961 | None:intergenic | 35.0% | |
| TACTACTACAGAATTGGAAG+TGG | + | chr8.3:10747235-10747254 | MS.gene58221:CDS | 35.0% | |
| TGAATTTATTCCCATCTCCA+TGG | + | chr8.3:10748601-10748620 | MS.gene58221:intron | 35.0% | |
| TGTTCATGCCTATGAAAGAT+CGG | + | chr8.3:10749412-10749431 | MS.gene58221:CDS | 35.0% | |
| TTATCCAGCTATTCTCCATT+TGG | + | chr8.3:10748337-10748356 | MS.gene58221:CDS | 35.0% | |
| TTATTGGTCGTGAAGGTTTA+GGG | + | chr8.3:10749793-10749812 | MS.gene58221:intron | 35.0% | |
| TTCAGCATAACATATGAAGC+GGG | - | chr8.3:10748038-10748057 | None:intergenic | 35.0% | |
| TTCCAAGGAATGTTATTCCT+AGG | - | chr8.3:10748473-10748492 | None:intergenic | 35.0% | |
| TTCCTAGGAATAACATTCCT+TGG | + | chr8.3:10748468-10748487 | MS.gene58221:intron | 35.0% | |
| TTTCCTGTATTCCATATCCA+TGG | - | chr8.3:10747683-10747702 | None:intergenic | 35.0% | |
| ! | AATAGAGTACTTTCCCTACA+TGG | + | chr8.3:10747709-10747728 | MS.gene58221:CDS | 35.0% |
| ! | ACCTACAAATTTGGGATCAT+TGG | + | chr8.3:10747313-10747332 | MS.gene58221:CDS | 35.0% |
| ! | ACGGTTTTCTACAAAACTAC+AGG | - | chr8.3:10747970-10747989 | None:intergenic | 35.0% |
| ! | AGAGCAGATTAGTTACCAAA+TGG | - | chr8.3:10748355-10748374 | None:intergenic | 35.0% |
| ! | AGCACTTTTGCTTGTATATG+GGG | - | chr8.3:10748928-10748947 | None:intergenic | 35.0% |
| ! | ATCTACATTTCAGGTGATCT+GGG | + | chr8.3:10747491-10747510 | MS.gene58221:intron | 35.0% |
| ! | GTGATTCTTCTCGAGAATTT+TGG | + | chr8.3:10747257-10747276 | MS.gene58221:CDS | 35.0% |
| ! | TATCTACATTTCAGGTGATC+TGG | + | chr8.3:10747490-10747509 | MS.gene58221:intron | 35.0% |
| ! | TTATTGCCACCCTTTTCTTT+GGG | + | chr8.3:10748629-10748648 | MS.gene58221:intron | 35.0% |
| ! | TTTATTGCCACCCTTTTCTT+TGG | + | chr8.3:10748628-10748647 | MS.gene58221:intron | 35.0% |
| ! | TTTGAAACACCTCCTAAAGT+TGG | + | chr8.3:10747280-10747299 | MS.gene58221:CDS | 35.0% |
| !!! | GGGAAATTTTTTCTATTCCC+AGG | + | chr8.3:10748649-10748668 | MS.gene58221:intron | 35.0% |
| !!! | TCCCTATTTTTATGGTTCCT+AGG | - | chr8.3:10748561-10748580 | None:intergenic | 35.0% |
| AAGTATGCTGTCATGTGCAA+TGG | - | chr8.3:10747917-10747936 | None:intergenic | 40.0% | |
| AATATCTTCTAGGCCCTGTT+TGG | - | chr8.3:10746590-10746609 | None:intergenic | 40.0% | |
| ACTTGAAACAAACACACCCT+AGG | + | chr8.3:10748765-10748784 | MS.gene58221:intron | 40.0% | |
| AGGTATCAGTACACTGATGT+TGG | + | chr8.3:10747605-10747624 | MS.gene58221:CDS | 40.0% | |
| AGTACACACCACAATGGAAA+TGG | + | chr8.3:10749216-10749235 | MS.gene58221:CDS | 40.0% | |
| ATCAAGAAGGTCTTGCTTCT+AGG | + | chr8.3:10749688-10749707 | MS.gene58221:CDS | 40.0% | |
| ATGCCTATGAAAGATCGGTA+TGG | + | chr8.3:10749417-10749436 | MS.gene58221:intron | 40.0% | |
| CAATAAAGTTCCCATGGAGA+TGG | - | chr8.3:10748615-10748634 | None:intergenic | 40.0% | |
| CAGATGCCACCTACAAATTT+GGG | + | chr8.3:10747305-10747324 | MS.gene58221:CDS | 40.0% | |
| CAGTAAAGTACACACCACAA+TGG | + | chr8.3:10749210-10749229 | MS.gene58221:intron | 40.0% | |
| CGTTGAAGATAGGACTTGAA+AGG | - | chr8.3:10748235-10748254 | None:intergenic | 40.0% | |
| CTCTATATAGTGCTCAAGAG+TGG | - | chr8.3:10747537-10747556 | None:intergenic | 40.0% | |
| CTTTCTTGCCATCATCATTG+CGG | - | chr8.3:10749913-10749932 | None:intergenic | 40.0% | |
| GCAAATGCTGGATGATTAAG+TGG | - | chr8.3:10746244-10746263 | None:intergenic | 40.0% | |
| GCACACATAAGAATCCACTA+CGG | - | chr8.3:10749546-10749565 | None:intergenic | 40.0% | |
| GCCTGCTAACAAAATTCCAA+CGG | - | chr8.3:10748000-10748019 | None:intergenic | 40.0% | |
| GCTTCATTACTGTTGTAGAG+CGG | - | chr8.3:10749308-10749327 | None:intergenic | 40.0% | |
| GTTACCAAATGGAGAATAGC+TGG | - | chr8.3:10748344-10748363 | None:intergenic | 40.0% | |
| GTTATTGGTCGTGAAGGTTT+AGG | + | chr8.3:10749792-10749811 | MS.gene58221:intron | 40.0% | |
| TCAGCATAACATATGAAGCG+GGG | - | chr8.3:10748037-10748056 | None:intergenic | 40.0% | |
| TGTGCCAAATTGTACATGAC+TGG | - | chr8.3:10746893-10746912 | None:intergenic | 40.0% | |
| TGTGTGATATGCACCTACAA+TGG | - | chr8.3:10746811-10746830 | None:intergenic | 40.0% | |
| TTGATAGGGAAAAGACACCT+TGG | + | chr8.3:10749261-10749280 | MS.gene58221:CDS | 40.0% | |
| TTGTAGGTGCATATCACACA+AGG | + | chr8.3:10746811-10746830 | MS.gene58221:intron | 40.0% | |
| ! | AAGCTGGTTCATCAAGTACA+AGG | + | chr8.3:10749367-10749386 | MS.gene58221:CDS | 40.0% |
| ! | AGGGTGTGAAGTTTTCAACA+CGG | - | chr8.3:10748143-10748162 | None:intergenic | 40.0% |
| ! | GAAAACCGTTTTCATTCCGT+TGG | + | chr8.3:10747981-10748000 | MS.gene58221:intron | 40.0% |
| ! | TCACGAAATGCAGAGTATTC+TGG | - | chr8.3:10749827-10749846 | None:intergenic | 40.0% |
| ! | TCATTCCCTGCTCATGTTTT+GGG | + | chr8.3:10749443-10749462 | MS.gene58221:intron | 40.0% |
| ! | TCCCAGGAACATTTTATACC+CGG | + | chr8.3:10748665-10748684 | MS.gene58221:intron | 40.0% |
| ! | TCCGTTGGAATTTTGTTAGC+AGG | + | chr8.3:10747996-10748015 | MS.gene58221:intron | 40.0% |
| ! | TTCATTCCCTGCTCATGTTT+TGG | + | chr8.3:10749442-10749461 | MS.gene58221:intron | 40.0% |
| ! | TTGTCTTGTTGAAGGACTTG+AGG | + | chr8.3:10746996-10747015 | MS.gene58221:CDS | 40.0% |
| !! | AAGGTTGATGTGATCTTTGC+TGG | + | chr8.3:10749386-10749405 | MS.gene58221:CDS | 40.0% |
| !! | AGTACACTGATGTTGGTTTG+CGG | + | chr8.3:10747612-10747631 | MS.gene58221:CDS | 40.0% |
| !! | CAATGATGATGGCAAGAAAG+TGG | + | chr8.3:10749913-10749932 | MS.gene58221:CDS | 40.0% |
| !! | CATGGAGTTGCATGCTATTT+TGG | + | chr8.3:10749479-10749498 | MS.gene58221:intron | 40.0% |
| AATTGTACATGACTGGACCC+TGG | - | chr8.3:10746886-10746905 | None:intergenic | 45.0% | |
| ACGCCTGATTGCATACCAAA+GGG | - | chr8.3:10748296-10748315 | None:intergenic | 45.0% | |
| ACTTTCGGGGAATACAAGTC+TGG | + | chr8.3:10746961-10746980 | MS.gene58221:CDS | 45.0% | |
| AGGAACCCAAAACATGAGCA+GGG | - | chr8.3:10749451-10749470 | None:intergenic | 45.0% | |
| ATCAGCACCTGTGTACATCA+CGG | + | chr8.3:10749650-10749669 | MS.gene58221:CDS | 45.0% | |
| ATTTGTCAGCTACGGGATAC+CGG | - | chr8.3:10749632-10749651 | None:intergenic | 45.0% | |
| CAGCCATGGATATGGAATAC+AGG | + | chr8.3:10747677-10747696 | MS.gene58221:CDS | 45.0% | |
| CATTTCGTGAAGCCAGCTAT+GGG | + | chr8.3:10749837-10749856 | MS.gene58221:CDS | 45.0% | |
| CCAAATTTGTAGGTGGCATC+TGG | - | chr8.3:10747307-10747326 | None:intergenic | 45.0% | |
| CCAGATGCCACCTACAAATT+TGG | + | chr8.3:10747304-10747323 | MS.gene58221:CDS | 45.0% | |
| CCAGCATTTGCAGTTCCTAA+GGG | + | chr8.3:10746253-10746272 | MS.gene58221:CDS | 45.0% | |
| CCCGGGTATAAAATGTTCCT+GGG | - | chr8.3:10748669-10748688 | None:intergenic | 45.0% | |
| CTCTAGTGCTCTACCATGTA+GGG | - | chr8.3:10747725-10747744 | None:intergenic | 45.0% | |
| GGAGAATCGATACTGAAAGC+AGG | - | chr8.3:10749580-10749599 | None:intergenic | 45.0% | |
| GGAGATGGAGGAAATCAAGA+AGG | + | chr8.3:10749675-10749694 | MS.gene58221:CDS | 45.0% | |
| GGGTCCAGTCATGTACAATT+TGG | + | chr8.3:10746886-10746905 | MS.gene58221:CDS | 45.0% | |
| GTACTCTTGGACGCCAAATA+AGG | - | chr8.3:10748268-10748287 | None:intergenic | 45.0% | |
| TCAATCTACTGCACAAGGCA+CGG | + | chr8.3:10746927-10746946 | MS.gene58221:CDS | 45.0% | |
| TCAGCAGAGATGTGTATGCA+GGG | + | chr8.3:10746173-10746192 | MS.gene58221:CDS | 45.0% | |
| TCCAGCATTTGCAGTTCCTA+AGG | + | chr8.3:10746252-10746271 | MS.gene58221:CDS | 45.0% | |
| TCTCTAGTGCTCTACCATGT+AGG | - | chr8.3:10747726-10747745 | None:intergenic | 45.0% | |
| TCTCTGAGCCATTTCCATTG+TGG | - | chr8.3:10749227-10749246 | None:intergenic | 45.0% | |
| TGAGGTGCATTATGTCCCTT+AGG | - | chr8.3:10746271-10746290 | None:intergenic | 45.0% | |
| TGCAACTCCATGTATTGTGC+AGG | - | chr8.3:10749471-10749490 | None:intergenic | 45.0% | |
| TGCATGAGAACAATGAGCCA+AGG | - | chr8.3:10749281-10749300 | None:intergenic | 45.0% | |
| TTAGTCATGTGATGCCGTAG+TGG | + | chr8.3:10749529-10749548 | MS.gene58221:intron | 45.0% | |
| TTCAGCAGAGATGTGTATGC+AGG | + | chr8.3:10746172-10746191 | MS.gene58221:CDS | 45.0% | |
| TTGGGTTCCTGCACAATACA+TGG | + | chr8.3:10749461-10749480 | MS.gene58221:intron | 45.0% | |
| ! | AATGCAGAGTATTCTGGCTG+AGG | - | chr8.3:10749821-10749840 | None:intergenic | 45.0% |
| ! | CCAGGAACATTTTATACCCG+GGG | + | chr8.3:10748667-10748686 | MS.gene58221:intron | 45.0% |
| ! | CCCAGGAACATTTTATACCC+GGG | + | chr8.3:10748666-10748685 | MS.gene58221:intron | 45.0% |
| ! | GGGTGTGAAGTTTTCAACAC+GGG | - | chr8.3:10748142-10748161 | None:intergenic | 45.0% |
| ! | GTCTTTTCCCTATCAACCTG+TGG | - | chr8.3:10749257-10749276 | None:intergenic | 45.0% |
| !! | AGGTGCTGATTTGTCAGCTA+CGG | - | chr8.3:10749640-10749659 | None:intergenic | 45.0% |
| !! | CATGGGCTCGATTTGTTGAA+AGG | + | chr8.3:10747642-10747661 | MS.gene58221:CDS | 45.0% |
| CACGCCTGATTGCATACCAA+AGG | - | chr8.3:10748297-10748316 | None:intergenic | 50.0% | |
| CACTGGAACCGCAATGATGA+TGG | + | chr8.3:10749902-10749921 | MS.gene58221:CDS | 50.0% | |
| CAGCGTATCAGCCATGGATA+TGG | + | chr8.3:10747669-10747688 | MS.gene58221:CDS | 50.0% | |
| CAGGAACCCAAAACATGAGC+AGG | - | chr8.3:10749452-10749471 | None:intergenic | 50.0% | |
| CATCATCATTGCGGTTCCAG+TGG | - | chr8.3:10749904-10749923 | None:intergenic | 50.0% | |
| CCCCGGGTATAAAATGTTCC+TGG | - | chr8.3:10748670-10748689 | None:intergenic | 50.0% | |
| CCCTTAGGAACTGCAAATGC+TGG | - | chr8.3:10746256-10746275 | None:intergenic | 50.0% | |
| CGCCTGATTGCATACCAAAG+GGG | - | chr8.3:10748295-10748314 | None:intergenic | 50.0% | |
| CTTGGACGCCAAATAAGGAG+TGG | - | chr8.3:10748263-10748282 | None:intergenic | 50.0% | |
| GAACACATGCTGTCTACCAC+TGG | + | chr8.3:10749885-10749904 | MS.gene58221:CDS | 50.0% | |
| GCATCTGGTCCAACTTTAGG+AGG | - | chr8.3:10747292-10747311 | None:intergenic | 50.0% | |
| GCATTTCGTGAAGCCAGCTA+TGG | + | chr8.3:10749836-10749855 | MS.gene58221:CDS | 50.0% | |
| GCCTGATTGCATACCAAAGG+GGG | - | chr8.3:10748294-10748313 | None:intergenic | 50.0% | |
| GGGTGGCAATAAAGTTCCCA+TGG | - | chr8.3:10748621-10748640 | None:intergenic | 50.0% | |
| GTGGCATCTGGTCCAACTTT+AGG | - | chr8.3:10747295-10747314 | None:intergenic | 50.0% | |
| TGCGAGTGGTTTACGAAAGC+TGG | + | chr8.3:10749351-10749370 | MS.gene58221:CDS | 50.0% | |
| ! | TGGTTTGCGGTGGGATACAT+GGG | + | chr8.3:10747625-10747644 | MS.gene58221:CDS | 50.0% |
| !! | ACACTGATGTTGGTTTGCGG+TGG | + | chr8.3:10747615-10747634 | MS.gene58221:CDS | 50.0% |
| !! | ATGAGCTGCCACAGGTTGAT+AGG | + | chr8.3:10749246-10749265 | MS.gene58221:CDS | 50.0% |
| !! | CACTGATGTTGGTTTGCGGT+GGG | + | chr8.3:10747616-10747635 | MS.gene58221:CDS | 50.0% |
| !! | GGTGCTGATTTGTCAGCTAC+GGG | - | chr8.3:10749639-10749658 | None:intergenic | 50.0% |
| !! | TGAGCTGCCACAGGTTGATA+GGG | + | chr8.3:10749247-10749266 | MS.gene58221:CDS | 50.0% |
| !! | TTGGTTTGCGGTGGGATACA+TGG | + | chr8.3:10747624-10747643 | MS.gene58221:CDS | 50.0% |
| ACTGGACCCTGGTTCATCTG+GGG | - | chr8.3:10746875-10746894 | None:intergenic | 55.0% | |
| AGTCTAGCACTTGCTCCCCA+AGG | - | chr8.3:10748975-10748994 | None:intergenic | 55.0% | |
| GACTGGACCCTGGTTCATCT+GGG | - | chr8.3:10746876-10746895 | None:intergenic | 55.0% | |
| GATTGCATACCAAAGGGGGC+TGG | - | chr8.3:10748290-10748309 | None:intergenic | 55.0% | |
| GCACCTGTGTACATCACGGT+CGG | + | chr8.3:10749654-10749673 | MS.gene58221:CDS | 55.0% | |
| GCCCCCTTTGGTATGCAATC+AGG | + | chr8.3:10748290-10748309 | MS.gene58221:CDS | 55.0% | |
| GGAGTACAGCGTATCAGCCA+TGG | + | chr8.3:10747663-10747682 | MS.gene58221:CDS | 55.0% | |
| GTGTACATCACGGTCGGAGA+TGG | + | chr8.3:10749660-10749679 | MS.gene58221:CDS | 55.0% | |
| TACATCACGGTCGGAGATGG+AGG | + | chr8.3:10749663-10749682 | MS.gene58221:CDS | 55.0% | |
| TCTCCGACCGTGATGTACAC+AGG | - | chr8.3:10749660-10749679 | None:intergenic | 55.0% | |
| TGACTGGACCCTGGTTCATC+TGG | - | chr8.3:10746877-10746896 | None:intergenic | 55.0% | |
| ! | GGAAGGTGAAAGCATGCGAG+TGG | + | chr8.3:10749337-10749356 | MS.gene58221:CDS | 55.0% |
| CAGCTATGGGCACTCCACGT+TGG | + | chr8.3:10749850-10749869 | MS.gene58221:CDS | 60.0% | |
| GCTCAGAGATGAGCTGCCAC+AGG | + | chr8.3:10749238-10749257 | MS.gene58221:CDS | 60.0% | |
| GGGTGACCCCAGATGAACCA+GGG | + | chr8.3:10746866-10746885 | MS.gene58221:CDS | 60.0% | |
| TGGGTGACCCCAGATGAACC+AGG | + | chr8.3:10746865-10746884 | MS.gene58221:CDS | 60.0% | |
| ! | CAACGTGGAGTGCCCATAGC+TGG | - | chr8.3:10749852-10749871 | None:intergenic | 60.0% |
| ! | CCAAAGGGGGCTGGTACTCT+TGG | - | chr8.3:10748281-10748300 | None:intergenic | 60.0% |
| !! | CCAAGAGTACCAGCCCCCTT+TGG | + | chr8.3:10748278-10748297 | MS.gene58221:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 10746124 | 10749969 | 10746124 | ID=MS.gene58221 |
| chr8.3 | mRNA | 10746124 | 10749969 | 10746124 | ID=MS.gene58221.t1;Parent=MS.gene58221 |
| chr8.3 | exon | 10746124 | 10746294 | 10746124 | ID=MS.gene58221.t1.exon1;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10746124 | 10746294 | 10746124 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10746817 | 10747017 | 10746817 | ID=MS.gene58221.t1.exon2;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10746817 | 10747017 | 10746817 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10747223 | 10747334 | 10747223 | ID=MS.gene58221.t1.exon3;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10747223 | 10747334 | 10747223 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10747504 | 10747730 | 10747504 | ID=MS.gene58221.t1.exon4;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10747504 | 10747730 | 10747504 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10748220 | 10748358 | 10748220 | ID=MS.gene58221.t1.exon5;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10748220 | 10748358 | 10748220 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10749213 | 10749433 | 10749213 | ID=MS.gene58221.t1.exon6;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10749213 | 10749433 | 10749213 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10749588 | 10749709 | 10749588 | ID=MS.gene58221.t1.exon7;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10749588 | 10749709 | 10749588 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| chr8.3 | exon | 10749808 | 10749969 | 10749808 | ID=MS.gene58221.t1.exon8;Parent=MS.gene58221.t1 |
| chr8.3 | CDS | 10749808 | 10749969 | 10749808 | ID=cds.MS.gene58221.t1;Parent=MS.gene58221.t1 |
| Gene Sequence |
| Protein sequence |
