Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72651.t1 | XP_003612356.1 | 99.2 | 391 | 3 | 0 | 4 | 394 | 3 | 393 | 1.90E-224 | 788.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72651.t1 | Q42807 | 91.2 | 388 | 32 | 1 | 4 | 391 | 3 | 388 | 3.6e-208 | 725.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72651.t1 | Q4U601 | 99.2 | 391 | 3 | 0 | 4 | 394 | 3 | 393 | 1.4e-224 | 788.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene72651 | MS.gene026689 | PPI |
| MS.gene054155 | MS.gene72651 | PPI |
| MS.gene72651 | MS.gene31844 | PPI |
| MS.gene72651 | MS.gene32324 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72651.t1 | MTR_5g024130 | 99.233 | 391 | 3 | 0 | 4 | 394 | 3 | 393 | 0.0 | 808 |
| MS.gene72651.t1 | MTR_4g087440 | 98.210 | 391 | 7 | 0 | 4 | 394 | 3 | 393 | 0.0 | 799 |
| MS.gene72651.t1 | MTR_1g029150 | 71.681 | 339 | 92 | 2 | 60 | 394 | 52 | 390 | 0.0 | 522 |
| MS.gene72651.t1 | MTR_3g090100 | 64.489 | 352 | 113 | 4 | 47 | 394 | 23 | 366 | 4.10e-169 | 477 |
| MS.gene72651.t1 | MTR_3g089025 | 65.782 | 339 | 113 | 2 | 58 | 394 | 32 | 369 | 7.14e-169 | 477 |
| MS.gene72651.t1 | MTR_3g090020 | 64.000 | 350 | 118 | 3 | 47 | 394 | 23 | 366 | 7.80e-167 | 471 |
| MS.gene72651.t1 | MTR_3g090010 | 65.672 | 335 | 112 | 2 | 60 | 392 | 35 | 368 | 2.85e-164 | 465 |
| MS.gene72651.t1 | MTR_3g090110 | 40.171 | 117 | 47 | 1 | 238 | 354 | 2 | 95 | 7.11e-22 | 90.1 |
| MS.gene72651.t1 | MTR_3g089980 | 47.423 | 97 | 38 | 1 | 258 | 354 | 7 | 90 | 1.37e-21 | 88.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene72651.t1 | AT2G43710 | 81.061 | 396 | 70 | 2 | 3 | 394 | 7 | 401 | 0.0 | 669 |
| MS.gene72651.t1 | AT2G43710 | 80.808 | 396 | 71 | 2 | 3 | 394 | 7 | 401 | 0.0 | 667 |
| MS.gene72651.t1 | AT3G02630 | 79.679 | 374 | 75 | 1 | 20 | 392 | 21 | 394 | 0.0 | 637 |
| MS.gene72651.t1 | AT5G16240 | 77.500 | 360 | 78 | 2 | 34 | 392 | 35 | 392 | 0.0 | 594 |
| MS.gene72651.t1 | AT3G02610 | 68.329 | 401 | 112 | 6 | 3 | 394 | 19 | 413 | 0.0 | 550 |
| MS.gene72651.t1 | AT3G02610 | 68.329 | 401 | 112 | 6 | 3 | 394 | 17 | 411 | 0.0 | 550 |
| MS.gene72651.t1 | AT5G16230 | 65.414 | 399 | 133 | 4 | 1 | 394 | 3 | 401 | 0.0 | 535 |
| MS.gene72651.t1 | AT3G02620 | 68.074 | 379 | 109 | 4 | 22 | 394 | 34 | 406 | 0.0 | 533 |
| MS.gene72651.t1 | AT3G02620 | 68.074 | 379 | 109 | 4 | 22 | 394 | 31 | 403 | 0.0 | 533 |
| MS.gene72651.t1 | AT1G43800 | 65.535 | 383 | 125 | 4 | 15 | 392 | 9 | 389 | 0.0 | 518 |
| MS.gene72651.t1 | AT5G16230 | 73.538 | 325 | 82 | 3 | 74 | 394 | 1 | 325 | 1.18e-178 | 500 |
| MS.gene72651.t1 | AT3G02620 | 72.783 | 327 | 83 | 3 | 74 | 394 | 1 | 327 | 1.03e-177 | 498 |
Find 128 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGAAAATTTCAATCTTT+TGG | 0.153941 | 5.4:+15553150 | None:intergenic |
| TGCTGATATACTTGAGTTTC+TGG | 0.154020 | 5.4:-15552046 | MS.gene72651:CDS |
| AACACTTCTCCACGGGTTTA+AGG | 0.177206 | 5.4:+15553090 | None:intergenic |
| GCCCTACTCCCTGGGCTATT+TGG | 0.216121 | 5.4:-15552869 | MS.gene72651:CDS |
| GGTGGAAGCCATGAGGAATT+TGG | 0.217183 | 5.4:+15554378 | None:intergenic |
| GCCGACATAACGGGACTTTC+AGG | 0.282345 | 5.4:-15552006 | MS.gene72651:CDS |
| TCCTCCAGCCTTCTGATTCT+AGG | 0.295657 | 5.4:+15551943 | None:intergenic |
| CATTCAGTTGGATTCATGAT+AGG | 0.310680 | 5.4:-15551882 | MS.gene72651:CDS |
| TACTTGAACATGCACTTCTC+TGG | 0.313192 | 5.4:+15553190 | None:intergenic |
| GGGTTTAAGGTGAGTCAATA+AGG | 0.313316 | 5.4:+15553103 | None:intergenic |
| CCAAACTATGCTTAATACTT+TGG | 0.328282 | 5.4:-15552919 | MS.gene72651:CDS |
| TTAAGCATAGTTTGGTAAGT+AGG | 0.345744 | 5.4:+15552927 | None:intergenic |
| AGATGACTACTTTGTTGTTC+TGG | 0.348048 | 5.4:-15552979 | MS.gene72651:CDS |
| AATCCAACTGAATGCAAGTT+TGG | 0.355409 | 5.4:+15551891 | None:intergenic |
| CCAAAGTATTAAGCATAGTT+TGG | 0.366292 | 5.4:+15552919 | None:intergenic |
| CTGCCTGATCCTTCCTCAGA+TGG | 0.373394 | 5.4:-15553050 | MS.gene72651:CDS |
| TGTTGTTCTGGTTGGAGATA+TGG | 0.377751 | 5.4:-15552967 | MS.gene72651:CDS |
| GTGGAAGCCATGAGGAATTT+GGG | 0.381387 | 5.4:+15554379 | None:intergenic |
| AACAAGTATCTTTACTTGTC+CGG | 0.381953 | 5.4:-15552801 | MS.gene72651:CDS |
| AAGACAATTCAGTACTTGAT+TGG | 0.388415 | 5.4:-15552753 | MS.gene72651:CDS |
| AGGATGTTTGTGTAGGGAAA+GGG | 0.397504 | 5.4:+15554437 | None:intergenic |
| AAAGATAGTGGAAAAGCTAT+TGG | 0.403395 | 5.4:-15552226 | MS.gene72651:CDS |
| CTCCTTCTCTCTCCCTCAAA+TGG | 0.406762 | 5.4:-15554416 | MS.gene72651:CDS |
| TTTCAAATCGTTGGACGGTT+GGG | 0.409114 | 5.4:-15553135 | MS.gene72651:CDS |
| ATTCAGTACTTGATTGGCTC+TGG | 0.422057 | 5.4:-15552747 | MS.gene72651:CDS |
| ATGGCTTCCACCCTCCGTTC+TGG | 0.424747 | 5.4:-15554367 | MS.gene72651:CDS |
| CATCCAAACTTGCATTCAGT+TGG | 0.428488 | 5.4:-15551894 | MS.gene72651:CDS |
| GACGGGGTTCGTGATGAAAC+AGG | 0.435583 | 5.4:-15552897 | MS.gene72651:CDS |
| GATATACTTGAGTTTCTGGT+TGG | 0.441237 | 5.4:-15552042 | MS.gene72651:CDS |
| TCCAAATAGCCCAGGGAGTA+GGG | 0.449927 | 5.4:+15552868 | None:intergenic |
| AGAACAACAAAGTAGTCATC+TGG | 0.454468 | 5.4:+15552981 | None:intergenic |
| TGTGTTTCCATGCGATATAA+AGG | 0.456327 | 5.4:+15552341 | None:intergenic |
| CAGGTGCCAGCCCTACTCCC+TGG | 0.456573 | 5.4:-15552878 | MS.gene72651:CDS |
| CAGCAGAATAGTTATCAAAC+AGG | 0.457192 | 5.4:+15552106 | None:intergenic |
| ATATACTTGAGTTTCTGGTT+GGG | 0.460993 | 5.4:-15552041 | MS.gene72651:CDS |
| TGGAAGGTGGCCGACATAAC+GGG | 0.461245 | 5.4:-15552015 | MS.gene72651:CDS |
| AGAAGGAGGATGTTTGTGTA+GGG | 0.463532 | 5.4:+15554431 | None:intergenic |
| ACCGCGTTCCTTAGCAAGCC+TGG | 0.468561 | 5.4:+15552317 | None:intergenic |
| TCTGCTGTTGCCCAGCGCAT+TGG | 0.472536 | 5.4:-15552090 | MS.gene72651:CDS |
| CAGTGTAGACTCCAATGCGC+TGG | 0.478141 | 5.4:+15552079 | None:intergenic |
| GTGTAGATAAAGCCAAGGTA+AGG | 0.480370 | 5.4:+15552384 | None:intergenic |
| GTTTCTGGTTGGGAGGTGGA+AGG | 0.480811 | 5.4:-15552031 | MS.gene72651:CDS |
| GGATGTTTGTGTAGGGAAAG+GGG | 0.481333 | 5.4:+15554438 | None:intergenic |
| TACTTGAGTTTCTGGTTGGG+AGG | 0.483685 | 5.4:-15552038 | MS.gene72651:CDS |
| TATCGCATGGAAACACAGCC+AGG | 0.484282 | 5.4:-15552335 | MS.gene72651:CDS |
| GATCTGAGACTGGCCATTTG+AGG | 0.486343 | 5.4:+15554403 | None:intergenic |
| GACTACTTTGTTGTTCTGGT+TGG | 0.487848 | 5.4:-15552975 | MS.gene72651:CDS |
| AGAGGTTGAAAATATTAAGA+AGG | 0.489403 | 5.4:-15553225 | MS.gene72651:CDS |
| CTATGCTTAATACTTTGGAC+GGG | 0.489694 | 5.4:-15552914 | MS.gene72651:CDS |
| AAGGCACAGGAGTATGTTTG+TGG | 0.492271 | 5.4:-15551973 | MS.gene72651:CDS |
| GAGAAGGAGGATGTTTGTGT+AGG | 0.492943 | 5.4:+15554430 | None:intergenic |
| CGTCTCGGCCATCATACATC+AGG | 0.503492 | 5.4:+15552133 | None:intergenic |
| AAAGCAATAACTGTTCCATC+AGG | 0.503808 | 5.4:+15552195 | None:intergenic |
| TTGAGTTTCTGGTTGGGAGG+TGG | 0.503890 | 5.4:-15552035 | MS.gene72651:CDS |
| ATCGTTGGACGGTTGGGCTG+AGG | 0.504685 | 5.4:-15553129 | MS.gene72651:CDS |
| TATCAAACAGGTTGTCGTCT+CGG | 0.505744 | 5.4:+15552118 | None:intergenic |
| GACTGCTTACACAAAGATAG+TGG | 0.506240 | 5.4:-15552238 | MS.gene72651:CDS |
| ATCTGAGACTGGCCATTTGA+GGG | 0.507077 | 5.4:+15554404 | None:intergenic |
| CCATCATACATCAGGTGTGC+TGG | 0.507354 | 5.4:+15552141 | None:intergenic |
| ATTCAGTTGGATTCATGATA+GGG | 0.509293 | 5.4:-15551881 | MS.gene72651:CDS |
| AATCCATCTGAGGAAGGATC+AGG | 0.510617 | 5.4:+15553047 | None:intergenic |
| GTGGAAGGTGGCCGACATAA+CGG | 0.512885 | 5.4:-15552016 | MS.gene72651:CDS |
| TGCCCTTGTCCAAATAGCCC+AGG | 0.513839 | 5.4:+15552860 | None:intergenic |
| ACTATGCTTAATACTTTGGA+CGG | 0.515306 | 5.4:-15552915 | MS.gene72651:CDS |
| GGAACGCGGTGATTTGAAGT+TGG | 0.515541 | 5.4:-15552304 | MS.gene72651:CDS |
| GTCCAAATAGCCCAGGGAGT+AGG | 0.517699 | 5.4:+15552867 | None:intergenic |
| CTCCCTGGGCTATTTGGACA+AGG | 0.522312 | 5.4:-15552863 | MS.gene72651:CDS |
| AGGTGCCAGCCCTACTCCCT+GGG | 0.525825 | 5.4:-15552877 | MS.gene72651:CDS |
| CTACACTTCATTTCAAGAGA+GGG | 0.526696 | 5.4:-15552367 | MS.gene72651:CDS |
| AATAGCCCAGGGAGTAGGGC+TGG | 0.527579 | 5.4:+15552872 | None:intergenic |
| GTACTTGATTGGCTCTGGAA+TGG | 0.532321 | 5.4:-15552742 | MS.gene72651:intron |
| GGGCTATTTGGACAAGGGCA+TGG | 0.532896 | 5.4:-15552857 | MS.gene72651:CDS |
| TTGTCTCATATCAACACGTC+CGG | 0.538054 | 5.4:+15552782 | None:intergenic |
| ACTTGAACATGCACTTCTCT+GGG | 0.540588 | 5.4:+15553191 | None:intergenic |
| AGGTGAGGGACGAAAGGCAC+AGG | 0.547789 | 5.4:-15551986 | MS.gene72651:CDS |
| GCCACCTAGAATCAGAAGGC+TGG | 0.551778 | 5.4:-15551947 | MS.gene72651:CDS |
| TTGAAGTTGGCTCAGATCTG+TGG | 0.557237 | 5.4:-15552291 | MS.gene72651:CDS |
| TCTGGTTGGGAGGTGGAAGG+TGG | 0.560034 | 5.4:-15552028 | MS.gene72651:CDS |
| AGGGCGACCTTTATATCGCA+TGG | 0.560815 | 5.4:-15552348 | MS.gene72651:CDS |
| GAGGATGTTTGTGTAGGGAA+AGG | 0.563996 | 5.4:+15554436 | None:intergenic |
| ACCTGAAAGTCCCGTTATGT+CGG | 0.568218 | 5.4:+15552005 | None:intergenic |
| CAGATCTCCCAAATTCCTCA+TGG | 0.570557 | 5.4:-15554386 | MS.gene72651:CDS |
| GGTTGCCAACACTTCTCCAC+GGG | 0.572813 | 5.4:+15553083 | None:intergenic |
| AGTGTAGACTCCAATGCGCT+GGG | 0.573443 | 5.4:+15552080 | None:intergenic |
| AAGTGAAGGAACTGAGAGAG+AGG | 0.573671 | 5.4:-15553016 | MS.gene72651:CDS |
| AGGCACAGGAGTATGTTTGT+GGG | 0.574102 | 5.4:-15551972 | MS.gene72651:CDS |
| AAGTATATCAGCATAGTCCT+TGG | 0.575108 | 5.4:+15552056 | None:intergenic |
| GAATTTGGGAGATCTGAGAC+TGG | 0.578274 | 5.4:+15554393 | None:intergenic |
| TCTACACTTCATTTCAAGAG+AGG | 0.581234 | 5.4:-15552368 | MS.gene72651:CDS |
| TGGTTGCCAACACTTCTCCA+CGG | 0.585822 | 5.4:+15553082 | None:intergenic |
| GGCCATTTGAGGGAGAGAGA+AGG | 0.589016 | 5.4:+15554414 | None:intergenic |
| CATTTGAGGGAGAGAGAAGG+AGG | 0.590783 | 5.4:+15554417 | None:intergenic |
| GAGAGCTTCAGCAAGAGCAA+AGG | 0.595934 | 5.4:-15551920 | MS.gene72651:CDS |
| AAACACAGCCAGGCTTGCTA+AGG | 0.597013 | 5.4:-15552325 | MS.gene72651:CDS |
| TGTAGATAAAGCCAAGGTAA+GGG | 0.598444 | 5.4:+15552385 | None:intergenic |
| TTAAACCCGTGGAGAAGTGT+TGG | 0.603294 | 5.4:-15553088 | MS.gene72651:CDS |
| AATTTGATGGATAGGATCCT+CGG | 0.609645 | 5.4:-15552419 | MS.gene72651:intron |
| ACTTTCAGGTGAGGGACGAA+AGG | 0.610348 | 5.4:-15551992 | MS.gene72651:CDS |
| CCAGCACACCTGATGTATGA+TGG | 0.611997 | 5.4:-15552141 | MS.gene72651:CDS |
| CTATTGGAGATTGATCCTGA+TGG | 0.612852 | 5.4:-15552210 | MS.gene72651:CDS |
| TCTTCGAATCCATCTGAGGA+AGG | 0.617698 | 5.4:+15553041 | None:intergenic |
| GCCCTTGTCCAAATAGCCCA+GGG | 0.621824 | 5.4:+15552861 | None:intergenic |
| AGTGAAGGAACTGAGAGAGA+GGG | 0.623958 | 5.4:-15553015 | MS.gene72651:CDS |
| ACTGAGAATAGCCCTTACCT+TGG | 0.627826 | 5.4:-15552396 | MS.gene72651:CDS |
| TGACTTGGAACCAGAACGGA+GGG | 0.629360 | 5.4:+15554357 | None:intergenic |
| ATGAAGTGTAGATAAAGCCA+AGG | 0.630791 | 5.4:+15552379 | None:intergenic |
| TTGCTCTTCGAATCCATCTG+AGG | 0.631251 | 5.4:+15553037 | None:intergenic |
| TCTTTGTGTAAGCAGTCTCA+TGG | 0.635579 | 5.4:+15552244 | None:intergenic |
| CTTGGAACCAGAACGGAGGG+TGG | 0.638218 | 5.4:+15554360 | None:intergenic |
| GCCAGGCTTGCTAAGGAACG+CGG | 0.638241 | 5.4:-15552318 | MS.gene72651:CDS |
| TGGATTCGAAGAGCAAGTGA+AGG | 0.638840 | 5.4:-15553030 | MS.gene72651:CDS |
| CATTGGAGTCTACACTGCCA+AGG | 0.641019 | 5.4:-15552073 | MS.gene72651:CDS |
| TATGCTTAATACTTTGGACG+GGG | 0.647926 | 5.4:-15552913 | MS.gene72651:CDS |
| ATTGACTCACCTTAAACCCG+TGG | 0.649070 | 5.4:-15553099 | MS.gene72651:CDS |
| GGTTGCCACCTAGAATCAGA+AGG | 0.651159 | 5.4:-15551951 | MS.gene72651:CDS |
| ATAACGGGACTTTCAGGTGA+GGG | 0.651545 | 5.4:-15552000 | MS.gene72651:CDS |
| TCCAGCCTTCTGATTCTAGG+TGG | 0.652157 | 5.4:+15551946 | None:intergenic |
| GGGAAAGGGGTTGCTCTGAG+AGG | 0.657951 | 5.4:+15554451 | None:intergenic |
| TCCCTGGGCTATTTGGACAA+GGG | 0.661918 | 5.4:-15552862 | MS.gene72651:CDS |
| ACCTAGAATCAGAAGGCTGG+AGG | 0.666933 | 5.4:-15551944 | MS.gene72651:CDS |
| TTACTGACTTGGAACCAGAA+CGG | 0.677723 | 5.4:+15554353 | None:intergenic |
| TAAGGGCTATTCTCAGTCCG+AGG | 0.684437 | 5.4:+15552402 | None:intergenic |
| AACGGAGGGTGGAAGCCATG+AGG | 0.693929 | 5.4:+15554371 | None:intergenic |
| CATAACGGGACTTTCAGGTG+AGG | 0.697665 | 5.4:-15552001 | MS.gene72651:CDS |
| TGAACATGCACTTCTCTGGG+AGG | 0.699562 | 5.4:+15553194 | None:intergenic |
| GGATCAGGCAGAAAATCATG+TGG | 0.712751 | 5.4:+15553062 | None:intergenic |
| CTGACTTGGAACCAGAACGG+AGG | 0.718153 | 5.4:+15554356 | None:intergenic |
| ACAGCTGAAGAAAATAGACA+CGG | 0.759947 | 5.4:-15552834 | MS.gene72651:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATCATTATTTTTTTAAC+AGG | + | chr5.4:15552986-15553005 | None:intergenic | 10.0% |
| !!! | GTATAATCAATTATAAATTT+TGG | - | chr5.4:15552456-15552475 | MS.gene72651:intron | 10.0% |
| !! | AATTTATTATGAAACTAACT+AGG | + | chr5.4:15553614-15553633 | None:intergenic | 15.0% |
| !! | TAAATTATTACTATCATTCA+TGG | + | chr5.4:15552942-15552961 | None:intergenic | 15.0% |
| !!! | ATTTGAAAATTTCAATCTTT+TGG | + | chr5.4:15553177-15553196 | None:intergenic | 15.0% |
| !!! | TTTGAAAATTTCAATCTTTT+GGG | + | chr5.4:15553176-15553195 | None:intergenic | 15.0% |
| !! | AAAAATACTGAACTTAATTC+TGG | - | chr5.4:15552683-15552702 | MS.gene72651:intron | 20.0% |
| !! | AAATTCCGAAATTGAATTTA+TGG | + | chr5.4:15552397-15552416 | None:intergenic | 20.0% |
| !! | AAGATGAAATGAAAAAGTAA+GGG | + | chr5.4:15552003-15552022 | None:intergenic | 20.0% |
| !! | AGATGATCATAAAAAAGAAT+CGG | + | chr5.4:15552787-15552806 | None:intergenic | 20.0% |
| !! | ATAATGATATTAATACAGTC+TGG | - | chr5.4:15552995-15553014 | MS.gene72651:CDS | 20.0% |
| !! | CAATCAAAAAAACAAAACTA+AGG | + | chr5.4:15552335-15552354 | None:intergenic | 20.0% |
| !! | CATGCAAAAAAAAAAAAAAG+TGG | + | chr5.4:15552254-15552273 | None:intergenic | 20.0% |
| !! | TTTGTGATATGATATTGAAA+TGG | - | chr5.4:15552085-15552104 | MS.gene72651:CDS | 20.0% |
| !!! | GTTTTTTTGATTGTATTCTA+TGG | - | chr5.4:15552342-15552361 | MS.gene72651:CDS | 20.0% |
| !!! | TATAAATTTTGGAACTTGTT+GGG | - | chr5.4:15552467-15552486 | MS.gene72651:intron | 20.0% |
| !!! | TGTTTATATCTCTCTAATTT+TGG | - | chr5.4:15553874-15553893 | MS.gene72651:intron | 20.0% |
| !!! | TTATAAATTTTGGAACTTGT+TGG | - | chr5.4:15552466-15552485 | MS.gene72651:intron | 20.0% |
| !!! | TTGAAAATTTCAATCTTTTG+GGG | + | chr5.4:15553175-15553194 | None:intergenic | 20.0% |
| !!! | TTTCATATTATCACTTGTTA+TGG | - | chr5.4:15552220-15552239 | MS.gene72651:CDS | 20.0% |
| !!! | TTTTTTATGATCATCTACAT+GGG | - | chr5.4:15552791-15552810 | MS.gene72651:CDS | 20.0% |
| ! | AGAGGTTGAAAATATTAAGA+AGG | - | chr5.4:15553099-15553118 | MS.gene72651:CDS | 25.0% |
| ! | AGTTCATCAAAATGACAATT+TGG | + | chr5.4:15552892-15552911 | None:intergenic | 25.0% |
| ! | CATAATCATGCAAATGTTAA+AGG | - | chr5.4:15553635-15553654 | MS.gene72651:intron | 25.0% |
| ! | CTTCACCATAAATTCAATTT+CGG | - | chr5.4:15552389-15552408 | MS.gene72651:CDS | 25.0% |
| ! | CTTTAACATTTGCATGATTA+TGG | + | chr5.4:15553637-15553656 | None:intergenic | 25.0% |
| ! | GAAGATGAAATGAAAAAGTA+AGG | + | chr5.4:15552004-15552023 | None:intergenic | 25.0% |
| ! | TAAAAAAGAATCGGTAAACA+TGG | + | chr5.4:15552778-15552797 | None:intergenic | 25.0% |
| ! | TGATACTAGAGAAAAACATA+GGG | + | chr5.4:15552307-15552326 | None:intergenic | 25.0% |
| ! | TTAATCAATCAAATCACTAG+AGG | + | chr5.4:15552830-15552849 | None:intergenic | 25.0% |
| ! | TTGATTAACCTATGCATTTA+TGG | - | chr5.4:15552842-15552861 | MS.gene72651:CDS | 25.0% |
| !! | GATTGAAATTTTCAAATCGT+TGG | - | chr5.4:15553180-15553199 | MS.gene72651:CDS | 25.0% |
| !! | GTGAATTTGATAACTGTTTA+CGG | - | chr5.4:15552582-15552601 | MS.gene72651:intron | 25.0% |
| !! | TTTTATATTACTTTGCAGAG+AGG | - | chr5.4:15553081-15553100 | MS.gene72651:CDS | 25.0% |
| !!! | CTTTTTTATGATCATCTACA+TGG | - | chr5.4:15552790-15552809 | MS.gene72651:CDS | 25.0% |
| !!! | TGTTTTGAATTTCTAGAACA+AGG | - | chr5.4:15553786-15553805 | MS.gene72651:intron | 25.0% |
| AACAAGTATCTTTACTTGTC+CGG | - | chr5.4:15553523-15553542 | MS.gene72651:intron | 30.0% | |
| AAGACAATTCAGTACTTGAT+TGG | - | chr5.4:15553571-15553590 | MS.gene72651:intron | 30.0% | |
| ACTATGCTTAATACTTTGGA+CGG | - | chr5.4:15553409-15553428 | MS.gene72651:intron | 30.0% | |
| ATTCAGTTGGATTCATGATA+GGG | - | chr5.4:15554443-15554462 | MS.gene72651:CDS | 30.0% | |
| CCAAACTATGCTTAATACTT+TGG | - | chr5.4:15553405-15553424 | MS.gene72651:intron | 30.0% | |
| CTGATACTAGAGAAAAACAT+AGG | + | chr5.4:15552308-15552327 | None:intergenic | 30.0% | |
| GAAATGAAAAAGTAAGGGAA+GGG | + | chr5.4:15551998-15552017 | None:intergenic | 30.0% | |
| TACAGAGAATGTGCTTAAAA+TGG | - | chr5.4:15553693-15553712 | MS.gene72651:intron | 30.0% | |
| TGAAATGAAAAAGTAAGGGA+AGG | + | chr5.4:15551999-15552018 | None:intergenic | 30.0% | |
| TGAGTCAAGAATGAATTTCA+TGG | + | chr5.4:15553820-15553839 | None:intergenic | 30.0% | |
| TGATAACTGTTTACGGAAAT+TGG | - | chr5.4:15552589-15552608 | MS.gene72651:intron | 30.0% | |
| TTAAGCATAGTTTGGTAAGT+AGG | + | chr5.4:15553400-15553419 | None:intergenic | 30.0% | |
| TTTGGATTGATGGAATTTGA+TGG | - | chr5.4:15553892-15553911 | MS.gene72651:intron | 30.0% | |
| ! | ATTGATGGAATTTGATGGAT+AGG | - | chr5.4:15553897-15553916 | MS.gene72651:intron | 30.0% |
| ! | CCAAAGTATTAAGCATAGTT+TGG | + | chr5.4:15553408-15553427 | None:intergenic | 30.0% |
| ! | GAAATTTTCAAATCGTTGGA+CGG | - | chr5.4:15553184-15553203 | MS.gene72651:CDS | 30.0% |
| ! | TCTCTCTAATTTTGGATTGA+TGG | - | chr5.4:15553882-15553901 | MS.gene72651:intron | 30.0% |
| !! | AAAATTTCAATCTTTTGGGG+AGG | + | chr5.4:15553172-15553191 | None:intergenic | 30.0% |
| !! | AAAGATAGTGGAAAAGCTAT+TGG | - | chr5.4:15554098-15554117 | MS.gene72651:intron | 30.0% |
| !! | ATATACTTGAGTTTCTGGTT+GGG | - | chr5.4:15554283-15554302 | MS.gene72651:intron | 30.0% |
| !! | CATTTTGATGAACTCTACAT+GGG | - | chr5.4:15552898-15552917 | MS.gene72651:CDS | 30.0% |
| !! | TCATTTTGATGAACTCTACA+TGG | - | chr5.4:15552897-15552916 | MS.gene72651:CDS | 30.0% |
| !!! | TTTTTTCTTTCCTTCTTTGC+AGG | - | chr5.4:15552126-15552145 | MS.gene72651:CDS | 30.0% |
| AAAGCAATAACTGTTCCATC+AGG | + | chr5.4:15554132-15554151 | None:intergenic | 35.0% | |
| AAGTATATCAGCATAGTCCT+TGG | + | chr5.4:15554271-15554290 | None:intergenic | 35.0% | |
| AATCCAACTGAATGCAAGTT+TGG | + | chr5.4:15554436-15554455 | None:intergenic | 35.0% | |
| AATTTATGGTGAAGTCACCT+AGG | + | chr5.4:15552383-15552402 | None:intergenic | 35.0% | |
| ACAGCTGAAGAAAATAGACA+CGG | - | chr5.4:15553490-15553509 | MS.gene72651:intron | 35.0% | |
| AGAACAACAAAGTAGTCATC+TGG | + | chr5.4:15553346-15553365 | None:intergenic | 35.0% | |
| ATGAAGTGTAGATAAAGCCA+AGG | + | chr5.4:15553948-15553967 | None:intergenic | 35.0% | |
| ATTTATGGTGAAGTCACCTA+GGG | + | chr5.4:15552382-15552401 | None:intergenic | 35.0% | |
| CAAACGCAAGGTCATTTAAA+TGG | - | chr5.4:15553032-15553051 | MS.gene72651:CDS | 35.0% | |
| CAGCAGAATAGTTATCAAAC+AGG | + | chr5.4:15554221-15554240 | None:intergenic | 35.0% | |
| CATTCAGTTGGATTCATGAT+AGG | - | chr5.4:15554442-15554461 | MS.gene72651:CDS | 35.0% | |
| CTACACTTCATTTCAAGAGA+GGG | - | chr5.4:15553957-15553976 | MS.gene72651:intron | 35.0% | |
| CTATGCTTAATACTTTGGAC+GGG | - | chr5.4:15553410-15553429 | MS.gene72651:intron | 35.0% | |
| GGTATAAACGTATATTCCCT+AGG | - | chr5.4:15552363-15552382 | MS.gene72651:CDS | 35.0% | |
| TAAATCAATTCGCAAACGCA+AGG | - | chr5.4:15553020-15553039 | MS.gene72651:CDS | 35.0% | |
| TATACGCTTTCTCTCTTTCT+TGG | - | chr5.4:15552541-15552560 | MS.gene72651:intron | 35.0% | |
| TATGCTTAATACTTTGGACG+GGG | - | chr5.4:15553411-15553430 | MS.gene72651:intron | 35.0% | |
| TCTACACTTCATTTCAAGAG+AGG | - | chr5.4:15553956-15553975 | MS.gene72651:intron | 35.0% | |
| TGCTGATATACTTGAGTTTC+TGG | - | chr5.4:15554278-15554297 | MS.gene72651:intron | 35.0% | |
| TGTAGATAAAGCCAAGGTAA+GGG | + | chr5.4:15553942-15553961 | None:intergenic | 35.0% | |
| TGTGTTTCCATGCGATATAA+AGG | + | chr5.4:15553986-15554005 | None:intergenic | 35.0% | |
| TTTAATGAGCTGTCCATTCT+TGG | + | chr5.4:15552629-15552648 | None:intergenic | 35.0% | |
| ! | AATTTGATGGATAGGATCCT+CGG | - | chr5.4:15553905-15553924 | MS.gene72651:intron | 35.0% |
| ! | TATATTGACTGCGATAACGT+TGG | + | chr5.4:15553672-15553691 | None:intergenic | 35.0% |
| !! | AGATGACTACTTTGTTGTTC+TGG | - | chr5.4:15553345-15553364 | MS.gene72651:intron | 35.0% |
| !! | GATATACTTGAGTTTCTGGT+TGG | - | chr5.4:15554282-15554301 | MS.gene72651:intron | 35.0% |
| AACCTATGCATTTATGGTGC+TGG | - | chr5.4:15552848-15552867 | MS.gene72651:CDS | 40.0% | |
| AATATCCTCACCTGCAAAGA+AGG | + | chr5.4:15552139-15552158 | None:intergenic | 40.0% | |
| ACTTGAACATGCACTTCTCT+GGG | + | chr5.4:15553136-15553155 | None:intergenic | 40.0% | |
| AGAAGGAGGATGTTTGTGTA+GGG | + | chr5.4:15551896-15551915 | None:intergenic | 40.0% | |
| AGGATGTTTGTGTAGGGAAA+GGG | + | chr5.4:15551890-15551909 | None:intergenic | 40.0% | |
| CATCCAAACTTGCATTCAGT+TGG | - | chr5.4:15554430-15554449 | MS.gene72651:CDS | 40.0% | |
| CTATTGGAGATTGATCCTGA+TGG | - | chr5.4:15554114-15554133 | MS.gene72651:intron | 40.0% | |
| GACTGCTTACACAAAGATAG+TGG | - | chr5.4:15554086-15554105 | MS.gene72651:intron | 40.0% | |
| GGATATTCAGGATGCTTGTT+TGG | - | chr5.4:15552152-15552171 | MS.gene72651:CDS | 40.0% | |
| GTGTAGATAAAGCCAAGGTA+AGG | + | chr5.4:15553943-15553962 | None:intergenic | 40.0% | |
| TACCAGCACCATAAATGCAT+AGG | + | chr5.4:15552853-15552872 | None:intergenic | 40.0% | |
| TACTTGAACATGCACTTCTC+TGG | + | chr5.4:15553137-15553156 | None:intergenic | 40.0% | |
| TATCAAACAGGTTGTCGTCT+CGG | + | chr5.4:15554209-15554228 | None:intergenic | 40.0% | |
| TCTTTGTGTAAGCAGTCTCA+TGG | + | chr5.4:15554083-15554102 | None:intergenic | 40.0% | |
| TTGTCTCATATCAACACGTC+CGG | + | chr5.4:15553545-15553564 | None:intergenic | 40.0% | |
| TTTCAAATCGTTGGACGGTT+GGG | - | chr5.4:15553189-15553208 | MS.gene72651:CDS | 40.0% | |
| ! | ATTCAGTACTTGATTGGCTC+TGG | - | chr5.4:15553577-15553596 | MS.gene72651:intron | 40.0% |
| ! | GATCATCTACATGGGAGTAT+TGG | - | chr5.4:15552799-15552818 | MS.gene72651:CDS | 40.0% |
| ! | GGGTTTAAGGTGAGTCAATA+AGG | + | chr5.4:15553224-15553243 | None:intergenic | 40.0% |
| ! | TGTTGTTCTGGTTGGAGATA+TGG | - | chr5.4:15553357-15553376 | MS.gene72651:intron | 40.0% |
| ! | TTTTCAAATCGTTGGACGGT+TGG | - | chr5.4:15553188-15553207 | MS.gene72651:CDS | 40.0% |
| !! | GACTACTTTGTTGTTCTGGT+TGG | - | chr5.4:15553349-15553368 | MS.gene72651:intron | 40.0% |
| !! | TTACTGACTTGGAACCAGAA+CGG | + | chr5.4:15551974-15551993 | None:intergenic | 40.0% |
| !! | TTGCTTTTGCTGACATGATG+AGG | - | chr5.4:15554145-15554164 | MS.gene72651:intron | 40.0% |
| !!! | ACTGTCGATTTTGATCAGAC+TGG | - | chr5.4:15552706-15552725 | MS.gene72651:intron | 40.0% |
| AACACTTCTCCACGGGTTTA+AGG | + | chr5.4:15553237-15553256 | None:intergenic | 45.0% | |
| AAGTGAAGGAACTGAGAGAG+AGG | - | chr5.4:15553308-15553327 | MS.gene72651:intron | 45.0% | |
| AATCCATCTGAGGAAGGATC+AGG | + | chr5.4:15553280-15553299 | None:intergenic | 45.0% | |
| ACCTGAAAGTCCCGTTATGT+CGG | + | chr5.4:15554322-15554341 | None:intergenic | 45.0% | |
| ACTGAGAATAGCCCTTACCT+TGG | - | chr5.4:15553928-15553947 | MS.gene72651:intron | 45.0% | |
| AGAATCGGTAAACATGGACC+CGG | + | chr5.4:15552772-15552791 | None:intergenic | 45.0% | |
| AGTGAAGGAACTGAGAGAGA+GGG | - | chr5.4:15553309-15553328 | MS.gene72651:intron | 45.0% | |
| CAGATCTCCCAAATTCCTCA+TGG | - | chr5.4:15551938-15551957 | MS.gene72651:CDS | 45.0% | |
| CAGTGACACATTGATGCATC+TGG | + | chr5.4:15553747-15553766 | None:intergenic | 45.0% | |
| CTTTGCAGGTGAGGATATTC+AGG | - | chr5.4:15552140-15552159 | MS.gene72651:CDS | 45.0% | |
| GAGAAGGAGGATGTTTGTGT+AGG | + | chr5.4:15551897-15551916 | None:intergenic | 45.0% | |
| GAGGATGTTTGTGTAGGGAA+AGG | + | chr5.4:15551891-15551910 | None:intergenic | 45.0% | |
| GGATCAGGCAGAAAATCATG+TGG | + | chr5.4:15553265-15553284 | None:intergenic | 45.0% | |
| GGATGTTTGTGTAGGGAAAG+GGG | + | chr5.4:15551889-15551908 | None:intergenic | 45.0% | |
| GTGGAAGCCATGAGGAATTT+GGG | + | chr5.4:15551948-15551967 | None:intergenic | 45.0% | |
| TCTTCGAATCCATCTGAGGA+AGG | + | chr5.4:15553286-15553305 | None:intergenic | 45.0% | |
| TCTTTCCTTCTTTGCAGGTG+AGG | - | chr5.4:15552131-15552150 | MS.gene72651:CDS | 45.0% | |
| TGGATTCGAAGAGCAAGTGA+AGG | - | chr5.4:15553294-15553313 | MS.gene72651:intron | 45.0% | |
| TTGCTCTTCGAATCCATCTG+AGG | + | chr5.4:15553290-15553309 | None:intergenic | 45.0% | |
| TTTGCTCACTGCAGCAAATC+CGG | - | chr5.4:15552750-15552769 | MS.gene72651:CDS | 45.0% | |
| TTTGCTGCAGTGAGCAAATC+CGG | + | chr5.4:15552748-15552767 | None:intergenic | 45.0% | |
| ! | AAGGCACAGGAGTATGTTTG+TGG | - | chr5.4:15554351-15554370 | MS.gene72651:intron | 45.0% |
| ! | AAGGGAAGGGATTACTGACT+TGG | + | chr5.4:15551985-15552004 | None:intergenic | 45.0% |
| ! | AGGCACAGGAGTATGTTTGT+GGG | - | chr5.4:15554352-15554371 | MS.gene72651:intron | 45.0% |
| ! | ATAACGGGACTTTCAGGTGA+GGG | - | chr5.4:15554324-15554343 | MS.gene72651:intron | 45.0% |
| ! | ATCTGAGACTGGCCATTTGA+GGG | + | chr5.4:15551923-15551942 | None:intergenic | 45.0% |
| ! | ATTGACTCACCTTAAACCCG+TGG | - | chr5.4:15553225-15553244 | MS.gene72651:CDS | 45.0% |
| ! | GAATTTGGGAGATCTGAGAC+TGG | + | chr5.4:15551934-15551953 | None:intergenic | 45.0% |
| ! | TTAAACCCGTGGAGAAGTGT+TGG | - | chr5.4:15553236-15553255 | MS.gene72651:intron | 45.0% |
| ! | TTGAAGTTGGCTCAGATCTG+TGG | - | chr5.4:15554033-15554052 | MS.gene72651:intron | 45.0% |
| !! | GTACTTGATTGGCTCTGGAA+TGG | - | chr5.4:15553582-15553601 | MS.gene72651:intron | 45.0% |
| !! | TACTTGAGTTTCTGGTTGGG+AGG | - | chr5.4:15554286-15554305 | MS.gene72651:intron | 45.0% |
| ACCTAGAATCAGAAGGCTGG+AGG | - | chr5.4:15554380-15554399 | MS.gene72651:CDS | 50.0% | |
| AGGGCGACCTTTATATCGCA+TGG | - | chr5.4:15553976-15553995 | MS.gene72651:intron | 50.0% | |
| AGTGTAGACTCCAATGCGCT+GGG | + | chr5.4:15554247-15554266 | None:intergenic | 50.0% | |
| CATACAGTCGCGTCCAAGAA+TGG | - | chr5.4:15552613-15552632 | MS.gene72651:intron | 50.0% | |
| CATTGGAGTCTACACTGCCA+AGG | - | chr5.4:15554251-15554270 | MS.gene72651:intron | 50.0% | |
| CATTTGAGGGAGAGAGAAGG+AGG | + | chr5.4:15551910-15551929 | None:intergenic | 50.0% | |
| CCAGCACACCTGATGTATGA+TGG | - | chr5.4:15554183-15554202 | MS.gene72651:intron | 50.0% | |
| CCATCATACATCAGGTGTGC+TGG | + | chr5.4:15554186-15554205 | None:intergenic | 50.0% | |
| CTCCTTCTCTCTCCCTCAAA+TGG | - | chr5.4:15551908-15551927 | MS.gene72651:CDS | 50.0% | |
| GAGAGCTTCAGCAAGAGCAA+AGG | - | chr5.4:15554404-15554423 | MS.gene72651:CDS | 50.0% | |
| GGTGGAAGCCATGAGGAATT+TGG | + | chr5.4:15551949-15551968 | None:intergenic | 50.0% | |
| GGTTGCCACCTAGAATCAGA+AGG | - | chr5.4:15554373-15554392 | MS.gene72651:CDS | 50.0% | |
| TAAGGGCTATTCTCAGTCCG+AGG | + | chr5.4:15553925-15553944 | None:intergenic | 50.0% | |
| TATCGCATGGAAACACAGCC+AGG | - | chr5.4:15553989-15554008 | MS.gene72651:intron | 50.0% | |
| TCCAAATAGCCCAGGGAGTA+GGG | + | chr5.4:15553459-15553478 | None:intergenic | 50.0% | |
| TCCAGCCTTCTGATTCTAGG+TGG | + | chr5.4:15554381-15554400 | None:intergenic | 50.0% | |
| TCCCTGGGCTATTTGGACAA+GGG | - | chr5.4:15553462-15553481 | MS.gene72651:intron | 50.0% | |
| TCCTCCAGCCTTCTGATTCT+AGG | + | chr5.4:15554384-15554403 | None:intergenic | 50.0% | |
| TGAACATGCACTTCTCTGGG+AGG | + | chr5.4:15553133-15553152 | None:intergenic | 50.0% | |
| TGGTTGCCAACACTTCTCCA+CGG | + | chr5.4:15553245-15553264 | None:intergenic | 50.0% | |
| TTGCTCACTGCAGCAAATCC+GGG | - | chr5.4:15552751-15552770 | MS.gene72651:CDS | 50.0% | |
| ! | ACTTTCAGGTGAGGGACGAA+AGG | - | chr5.4:15554332-15554351 | MS.gene72651:intron | 50.0% |
| ! | CATAACGGGACTTTCAGGTG+AGG | - | chr5.4:15554323-15554342 | MS.gene72651:intron | 50.0% |
| ! | GATCTGAGACTGGCCATTTG+AGG | + | chr5.4:15551924-15551943 | None:intergenic | 50.0% |
| ! | GGAACGCGGTGATTTGAAGT+TGG | - | chr5.4:15554020-15554039 | MS.gene72651:intron | 50.0% |
| ! | TGACTTGGAACCAGAACGGA+GGG | + | chr5.4:15551970-15551989 | None:intergenic | 50.0% |
| !! | AAACACAGCCAGGCTTGCTA+AGG | - | chr5.4:15553999-15554018 | MS.gene72651:intron | 50.0% |
| !! | CTTTTGGGGAGGCATAGAGT+GGG | + | chr5.4:15553161-15553180 | None:intergenic | 50.0% |
| !! | TCTTTTGGGGAGGCATAGAG+TGG | + | chr5.4:15553162-15553181 | None:intergenic | 50.0% |
| !! | TTGAGTTTCTGGTTGGGAGG+TGG | - | chr5.4:15554289-15554308 | MS.gene72651:intron | 50.0% |
| CAGTGTAGACTCCAATGCGC+TGG | + | chr5.4:15554248-15554267 | None:intergenic | 55.0% | |
| CGTCTCGGCCATCATACATC+AGG | + | chr5.4:15554194-15554213 | None:intergenic | 55.0% | |
| CTCCCTGGGCTATTTGGACA+AGG | - | chr5.4:15553461-15553480 | MS.gene72651:intron | 55.0% | |
| CTGCCTGATCCTTCCTCAGA+TGG | - | chr5.4:15553274-15553293 | MS.gene72651:intron | 55.0% | |
| GACGGGGTTCGTGATGAAAC+AGG | - | chr5.4:15553427-15553446 | MS.gene72651:intron | 55.0% | |
| GCCACCTAGAATCAGAAGGC+TGG | - | chr5.4:15554377-15554396 | MS.gene72651:CDS | 55.0% | |
| GCCCTTGTCCAAATAGCCCA+GGG | + | chr5.4:15553466-15553485 | None:intergenic | 55.0% | |
| GGCCATTTGAGGGAGAGAGA+AGG | + | chr5.4:15551913-15551932 | None:intergenic | 55.0% | |
| GGGCTATTTGGACAAGGGCA+TGG | - | chr5.4:15553467-15553486 | MS.gene72651:intron | 55.0% | |
| GGTTGCCAACACTTCTCCAC+GGG | + | chr5.4:15553244-15553263 | None:intergenic | 55.0% | |
| GTCCAAATAGCCCAGGGAGT+AGG | + | chr5.4:15553460-15553479 | None:intergenic | 55.0% | |
| GTGGAAGGTGGCCGACATAA+CGG | - | chr5.4:15554308-15554327 | MS.gene72651:intron | 55.0% | |
| TGCCCTTGTCCAAATAGCCC+AGG | + | chr5.4:15553467-15553486 | None:intergenic | 55.0% | |
| TGGAAGGTGGCCGACATAAC+GGG | - | chr5.4:15554309-15554328 | MS.gene72651:intron | 55.0% | |
| ! | GCCGACATAACGGGACTTTC+AGG | - | chr5.4:15554318-15554337 | MS.gene72651:intron | 55.0% |
| !! | CTGACTTGGAACCAGAACGG+AGG | + | chr5.4:15551971-15551990 | None:intergenic | 55.0% |
| !! | GTTTCTGGTTGGGAGGTGGA+AGG | - | chr5.4:15554293-15554312 | MS.gene72651:intron | 55.0% |
| !! | TGGCATCGACTTGTGACTGC+CGG | - | chr5.4:15552726-15552745 | MS.gene72651:intron | 55.0% |
| AACGGAGGGTGGAAGCCATG+AGG | + | chr5.4:15551956-15551975 | None:intergenic | 60.0% | |
| AATAGCCCAGGGAGTAGGGC+TGG | + | chr5.4:15553455-15553474 | None:intergenic | 60.0% | |
| ACCGCGTTCCTTAGCAAGCC+TGG | + | chr5.4:15554010-15554029 | None:intergenic | 60.0% | |
| ATCGTTGGACGGTTGGGCTG+AGG | - | chr5.4:15553195-15553214 | MS.gene72651:CDS | 60.0% | |
| ATGGCTTCCACCCTCCGTTC+TGG | - | chr5.4:15551957-15551976 | MS.gene72651:CDS | 60.0% | |
| CTTGGAACCAGAACGGAGGG+TGG | + | chr5.4:15551967-15551986 | None:intergenic | 60.0% | |
| GCCCTACTCCCTGGGCTATT+TGG | - | chr5.4:15553455-15553474 | MS.gene72651:intron | 60.0% | |
| TCTGCTGTTGCCCAGCGCAT+TGG | - | chr5.4:15554234-15554253 | MS.gene72651:intron | 60.0% | |
| TCTGGTTGGGAGGTGGAAGG+TGG | - | chr5.4:15554296-15554315 | MS.gene72651:intron | 60.0% | |
| ! | AGGTGAGGGACGAAAGGCAC+AGG | - | chr5.4:15554338-15554357 | MS.gene72651:intron | 60.0% |
| ! | GGGAAAGGGGTTGCTCTGAG+AGG | + | chr5.4:15551876-15551895 | None:intergenic | 60.0% |
| !! | GCCAGGCTTGCTAAGGAACG+CGG | - | chr5.4:15554006-15554025 | MS.gene72651:intron | 60.0% |
| AGGTGCCAGCCCTACTCCCT+GGG | - | chr5.4:15553447-15553466 | MS.gene72651:intron | 65.0% | |
| CAGGTGCCAGCCCTACTCCC+TGG | - | chr5.4:15553446-15553465 | MS.gene72651:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 15551867 | 15554479 | 15551867 | ID=MS.gene72651 |
| chr5.4 | mRNA | 15551867 | 15554479 | 15551867 | ID=MS.gene72651.t1;Parent=MS.gene72651 |
| chr5.4 | exon | 15554361 | 15554479 | 15554361 | ID=MS.gene72651.t1.exon1;Parent=MS.gene72651.t1 |
| chr5.4 | CDS | 15554361 | 15554479 | 15554361 | ID=cds.MS.gene72651.t1;Parent=MS.gene72651.t1 |
| chr5.4 | exon | 15552743 | 15553247 | 15552743 | ID=MS.gene72651.t1.exon2;Parent=MS.gene72651.t1 |
| chr5.4 | CDS | 15552743 | 15553247 | 15552743 | ID=cds.MS.gene72651.t1;Parent=MS.gene72651.t1 |
| chr5.4 | exon | 15551867 | 15552427 | 15551867 | ID=MS.gene72651.t1.exon3;Parent=MS.gene72651.t1 |
| chr5.4 | CDS | 15551867 | 15552427 | 15551867 | ID=cds.MS.gene72651.t1;Parent=MS.gene72651.t1 |
| Gene Sequence |
| Protein sequence |
