Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73557.t1 | RHN52774.1 | 92.1 | 493 | 34 | 2 | 1 | 488 | 1 | 493 | 3.30E-263 | 917.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73557.t1 | Q9C9T2 | 51.7 | 406 | 166 | 8 | 71 | 473 | 72 | 450 | 6.9e-108 | 392.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73557.t1 | A0A396HLL0 | 92.1 | 493 | 34 | 2 | 1 | 488 | 1 | 493 | 2.4e-263 | 917.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05439 | MS.gene73557 | 0.903805 | 2.37E-79 | -1.69E-46 |
| MS.gene054892 | MS.gene73557 | 0.836931 | 7.01E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene73557 | 0.834898 | 2.30E-56 | -1.69E-46 |
| MS.gene055147 | MS.gene73557 | 0.800541 | 1.37E-48 | -1.69E-46 |
| MS.gene060413 | MS.gene73557 | 0.829279 | 5.63E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73557.t1 | MTR_6g083730 | 90.264 | 493 | 35 | 3 | 1 | 488 | 1 | 485 | 0.0 | 914 |
| MS.gene73557.t1 | MTR_8g104510 | 62.500 | 480 | 166 | 10 | 1 | 473 | 1 | 473 | 0.0 | 591 |
| MS.gene73557.t1 | MTR_8g104490 | 61.943 | 494 | 171 | 13 | 1 | 486 | 1 | 485 | 0.0 | 573 |
| MS.gene73557.t1 | MTR_6g083320 | 90.970 | 299 | 22 | 2 | 1 | 294 | 1 | 299 | 0.0 | 551 |
| MS.gene73557.t1 | MTR_6g083320 | 84.091 | 132 | 13 | 1 | 357 | 488 | 296 | 419 | 4.11e-71 | 232 |
| MS.gene73557.t1 | MTR_8g104490 | 63.380 | 426 | 142 | 11 | 66 | 486 | 4 | 420 | 1.75e-179 | 509 |
| MS.gene73557.t1 | MTR_4g128600 | 45.411 | 414 | 208 | 8 | 1 | 409 | 12 | 412 | 2.16e-117 | 358 |
| MS.gene73557.t1 | MTR_4g090970 | 46.997 | 383 | 193 | 6 | 11 | 387 | 19 | 397 | 1.40e-113 | 348 |
| MS.gene73557.t1 | MTR_2g011810 | 45.736 | 387 | 195 | 7 | 7 | 387 | 21 | 398 | 1.10e-111 | 344 |
| MS.gene73557.t1 | MTR_2g450080 | 42.081 | 442 | 232 | 8 | 4 | 437 | 11 | 436 | 3.83e-109 | 336 |
| MS.gene73557.t1 | MTR_4g106810 | 46.203 | 316 | 159 | 8 | 1 | 315 | 1 | 306 | 1.51e-80 | 260 |
| MS.gene73557.t1 | MTR_6g083810 | 86.567 | 134 | 13 | 2 | 1 | 129 | 1 | 134 | 6.61e-73 | 227 |
| MS.gene73557.t1 | MTR_7g112000 | 37.013 | 308 | 180 | 7 | 89 | 390 | 81 | 380 | 8.16e-51 | 181 |
| MS.gene73557.t1 | MTR_7g111960 | 33.918 | 342 | 213 | 9 | 43 | 378 | 56 | 390 | 3.05e-47 | 172 |
| MS.gene73557.t1 | MTR_7g111980 | 34.125 | 337 | 201 | 8 | 47 | 376 | 59 | 381 | 5.02e-46 | 169 |
| MS.gene73557.t1 | MTR_7g111980 | 36.610 | 295 | 174 | 7 | 89 | 376 | 10 | 298 | 3.22e-45 | 165 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73557.t1 | AT1G73805 | 49.896 | 479 | 205 | 12 | 1 | 473 | 1 | 450 | 3.66e-148 | 431 |
| MS.gene73557.t1 | AT5G57580 | 40.607 | 527 | 253 | 14 | 3 | 482 | 12 | 525 | 1.23e-115 | 354 |
| MS.gene73557.t1 | AT4G25800 | 46.173 | 392 | 194 | 7 | 4 | 387 | 2 | 384 | 2.89e-111 | 342 |
| MS.gene73557.t1 | AT4G25800 | 46.173 | 392 | 194 | 7 | 4 | 387 | 2 | 384 | 2.89e-111 | 342 |
| MS.gene73557.t1 | AT2G18750 | 40.757 | 449 | 246 | 9 | 24 | 457 | 34 | 477 | 5.41e-109 | 337 |
| MS.gene73557.t1 | AT2G18750 | 40.757 | 449 | 246 | 9 | 24 | 457 | 34 | 477 | 5.41e-109 | 337 |
| MS.gene73557.t1 | AT2G18750 | 40.757 | 449 | 246 | 9 | 24 | 457 | 34 | 477 | 5.41e-109 | 337 |
| MS.gene73557.t1 | AT4G31000 | 41.527 | 419 | 223 | 10 | 15 | 422 | 21 | 428 | 4.35e-96 | 301 |
| MS.gene73557.t1 | AT2G24300 | 43.850 | 374 | 201 | 6 | 15 | 384 | 21 | 389 | 6.65e-96 | 302 |
| MS.gene73557.t1 | AT2G24300 | 43.850 | 374 | 201 | 6 | 15 | 384 | 17 | 385 | 6.96e-96 | 302 |
| MS.gene73557.t1 | AT2G24300 | 43.713 | 334 | 181 | 5 | 55 | 384 | 8 | 338 | 4.99e-84 | 270 |
| MS.gene73557.t1 | AT5G62570 | 38.462 | 377 | 206 | 9 | 14 | 381 | 18 | 377 | 8.65e-83 | 265 |
| MS.gene73557.t1 | AT5G62570 | 38.950 | 362 | 200 | 8 | 29 | 381 | 13 | 362 | 2.03e-82 | 264 |
| MS.gene73557.t1 | AT5G62570 | 39.276 | 359 | 192 | 9 | 14 | 363 | 18 | 359 | 4.69e-82 | 259 |
| MS.gene73557.t1 | AT4G31000 | 38.259 | 379 | 198 | 10 | 55 | 422 | 54 | 407 | 2.55e-71 | 236 |
| MS.gene73557.t1 | AT5G26920 | 34.973 | 366 | 218 | 7 | 20 | 381 | 18 | 367 | 3.82e-68 | 224 |
| MS.gene73557.t1 | AT5G26920 | 34.973 | 366 | 218 | 7 | 20 | 381 | 18 | 367 | 2.24e-67 | 226 |
| MS.gene73557.t1 | AT5G62570 | 42.254 | 284 | 143 | 7 | 17 | 295 | 21 | 288 | 2.54e-66 | 216 |
| MS.gene73557.t1 | AT5G26920 | 34.699 | 366 | 211 | 8 | 20 | 381 | 18 | 359 | 6.80e-64 | 217 |
Find 115 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGACTTATGCTTAT+AGG | 0.200523 | 6.4:+57901019 | None:intergenic |
| GAAGACTTGTTGGAACAATT+TGG | 0.268874 | 6.4:+57900981 | None:intergenic |
| GGGAAGAGACCATTACTTTC+TGG | 0.273521 | 6.4:-57900848 | MS.gene73557:CDS |
| TCAGAGTTATATAGACAAAT+TGG | 0.277663 | 6.4:-57898862 | MS.gene73557:intron |
| GCTTTAATTAATTTGCATAT+TGG | 0.279068 | 6.4:+57899070 | None:intergenic |
| ACCACAATCTCTAGCTTTAT+AGG | 0.281295 | 6.4:+57900953 | None:intergenic |
| AGTTTCATACCTGTGAAAAT+TGG | 0.291885 | 6.4:+57901759 | None:intergenic |
| GGATAAAGTGCAGGAAGTTC+AGG | 0.308330 | 6.4:-57900754 | MS.gene73557:CDS |
| ACTGTTGCTGGATGATTGTT+TGG | 0.310236 | 6.4:+57898162 | None:intergenic |
| TATGTTGTTGCTACTGTTGC+TGG | 0.313492 | 6.4:+57898150 | None:intergenic |
| TGCATTTGGTGTTGTGGTAT+AGG | 0.318778 | 6.4:+57898023 | None:intergenic |
| AATGCAAATGGATTTCCTTT+TGG | 0.323071 | 6.4:-57898006 | MS.gene73557:CDS |
| TATCATCAGAATCAATATTA+TGG | 0.324552 | 6.4:-57898129 | MS.gene73557:CDS |
| TATATTGTACCTTATTCATT+TGG | 0.345403 | 6.4:+57899005 | None:intergenic |
| TTGGAGAAGCATACACAAAA+TGG | 0.358634 | 6.4:-57898839 | MS.gene73557:CDS |
| GATCTCATTCGTTTGTCGTT+TGG | 0.359193 | 6.4:+57903600 | None:intergenic |
| CTAGAGATTGTGGTACTTGA+TGG | 0.361616 | 6.4:-57900944 | MS.gene73557:CDS |
| AAAGGAAATCCATTTGCATT+TGG | 0.365748 | 6.4:+57898009 | None:intergenic |
| GTACTTGAACCAAATGAATA+AGG | 0.370265 | 6.4:-57899014 | MS.gene73557:intron |
| GAAGAGGTGGATAGAGCAAT+TGG | 0.372285 | 6.4:-57901888 | MS.gene73557:CDS |
| GACTGAGGCATTTGTTGTTA+AGG | 0.376185 | 6.4:-57900675 | MS.gene73557:CDS |
| ATATATACCTCTCTTAGCTT+TGG | 0.376627 | 6.4:+57899718 | None:intergenic |
| CCACAATCTCTAGCTTTATA+GGG | 0.385020 | 6.4:+57900954 | None:intergenic |
| GCTTTCCACCTTCCATCAAT+AGG | 0.389606 | 6.4:-57901860 | MS.gene73557:CDS |
| ATAGGGTAAGGAAGACTTGT+TGG | 0.390458 | 6.4:+57900971 | None:intergenic |
| CTGTCCCTAGGGACATTAAT+GGG | 0.391628 | 6.4:-57897939 | MS.gene73557:CDS |
| TCTGTCCCTAGGGACATTAA+TGG | 0.395267 | 6.4:-57897940 | MS.gene73557:CDS |
| GTTGTTGATCCCTTGGTGCT+TGG | 0.401027 | 6.4:+57901820 | None:intergenic |
| GAAGTTCAGGGTTGCAGTTA+AGG | 0.401158 | 6.4:-57900741 | MS.gene73557:CDS |
| GTTTCATACCTGTGAAAATT+GGG | 0.401177 | 6.4:+57901760 | None:intergenic |
| TAATGAAGGTGACCTATTGA+TGG | 0.408912 | 6.4:+57901848 | None:intergenic |
| AGAGGTGGAATTGCACCAAT+TGG | 0.409164 | 6.4:-57900806 | MS.gene73557:CDS |
| GTGTGGCGCCTAGAGAAGAT+AGG | 0.412903 | 6.4:-57899826 | MS.gene73557:CDS |
| TACATAGTGAAGGAAAGAAC+TGG | 0.419237 | 6.4:-57900869 | MS.gene73557:CDS |
| TACAACTCTCATTCAACAAA+AGG | 0.425881 | 6.4:-57901791 | MS.gene73557:CDS |
| CACATGATGAAAATGAGAAC+TGG | 0.432538 | 6.4:-57900913 | MS.gene73557:CDS |
| AAGGTTGGTTGTTGATCCCT+TGG | 0.434839 | 6.4:+57901813 | None:intergenic |
| GAGGTGGAATTGCACCAATT+GGG | 0.439927 | 6.4:-57900805 | MS.gene73557:CDS |
| CATCTTTCCCTATCTTCTCT+AGG | 0.450984 | 6.4:+57899818 | None:intergenic |
| ATGGAAGTAATCAAGGTGTT+AGG | 0.454647 | 6.4:-57900712 | MS.gene73557:CDS |
| ACCACAACACCAAATGCAAA+TGG | 0.454821 | 6.4:-57898018 | MS.gene73557:CDS |
| GCCAAGCAATAATGTACAAA+TGG | 0.456056 | 6.4:-57898073 | MS.gene73557:CDS |
| ATCTCTAGCTTTATAGGGTA+AGG | 0.456668 | 6.4:+57900959 | None:intergenic |
| GCCATTTGTACATTATTGCT+TGG | 0.457120 | 6.4:+57898072 | None:intergenic |
| ACATGGGGAGCAAGATCTAT+AGG | 0.460309 | 6.4:-57899126 | MS.gene73557:CDS |
| TTAATTAAAGCTAATATCAA+TGG | 0.468078 | 6.4:-57899058 | MS.gene73557:CDS |
| TTTGTTGAATGAGAGTTGTA+AGG | 0.470397 | 6.4:+57901794 | None:intergenic |
| TCCATTTGCATTTGGTGTTG+TGG | 0.474676 | 6.4:+57898017 | None:intergenic |
| GCATATTGGATTCAGAAGAA+TGG | 0.478493 | 6.4:+57899084 | None:intergenic |
| AATGAGTTGGAGGAAATTGA+TGG | 0.479528 | 6.4:-57898816 | MS.gene73557:CDS |
| CAATTCCACCTCTCATAGTA+AGG | 0.486241 | 6.4:+57900816 | None:intergenic |
| CCACCACAAAATGATGGCTA+AGG | 0.503068 | 6.4:-57899788 | MS.gene73557:CDS |
| CACAAAATGGAATGAGTTGG+AGG | 0.508685 | 6.4:-57898826 | MS.gene73557:CDS |
| CACACATCATCGCCAAGCAT+TGG | 0.517632 | 6.4:+57899844 | None:intergenic |
| GTGAGTCATGGAAGTAATCA+AGG | 0.521196 | 6.4:-57900719 | MS.gene73557:CDS |
| AAACATCATCCACCAATGCT+TGG | 0.524035 | 6.4:-57899856 | MS.gene73557:CDS |
| AGTTCACAGATAACTCTAGC+TGG | 0.524233 | 6.4:-57900775 | MS.gene73557:CDS |
| CCCTATAAAGCTAGAGATTG+TGG | 0.525360 | 6.4:-57900954 | MS.gene73557:CDS |
| AACATTGCTTTGTTAACCCA+AGG | 0.527734 | 6.4:-57898780 | MS.gene73557:intron |
| TGGTTAGGTGAGTGAAGAGG+TGG | 0.534317 | 6.4:-57901901 | MS.gene73557:intron |
| GGTGCTTGGATTCTTAATGA+AGG | 0.535525 | 6.4:+57901834 | None:intergenic |
| ACCTTCAAGTTCTGTCCCTA+GGG | 0.537786 | 6.4:-57897950 | MS.gene73557:CDS |
| AGTTATATAGACAAATTGGT+TGG | 0.539117 | 6.4:-57898858 | MS.gene73557:CDS |
| GTGAACTCTATGTCCCCAAT+TGG | 0.542652 | 6.4:+57900791 | None:intergenic |
| TTGAATGAGAGTTGTAAGGT+TGG | 0.548181 | 6.4:+57901798 | None:intergenic |
| CACCACAAAATGATGGCTAA+GGG | 0.548210 | 6.4:-57899787 | MS.gene73557:CDS |
| ACTCTAGCTGGATAAAGTGC+AGG | 0.550813 | 6.4:-57900763 | MS.gene73557:CDS |
| GATAAAGTGCAGGAAGTTCA+GGG | 0.551185 | 6.4:-57900753 | MS.gene73557:CDS |
| TTCACAGGGTCACAATCAGA+TGG | 0.555752 | 6.4:-57897982 | MS.gene73557:CDS |
| ACATCATCGCCAAGCATTGG+TGG | 0.557359 | 6.4:+57899847 | None:intergenic |
| TCCCTAGGGACAGAACTTGA+AGG | 0.561736 | 6.4:+57897949 | None:intergenic |
| TTCAGAAGAATGGTAAATTG+AGG | 0.561852 | 6.4:+57899094 | None:intergenic |
| AGTTAAAGTGCAAAACATGC+GGG | 0.566025 | 6.4:-57903392 | MS.gene73557:CDS |
| ATACACAAAATGGAATGAGT+TGG | 0.570127 | 6.4:-57898829 | MS.gene73557:CDS |
| CACCTTCAAGTTCTGTCCCT+AGG | 0.570752 | 6.4:-57897951 | MS.gene73557:CDS |
| GTGAACCCATTAATGTCCCT+AGG | 0.571248 | 6.4:+57897934 | None:intergenic |
| CTAGAGAAGATAGGGAAAGA+TGG | 0.572158 | 6.4:-57899817 | MS.gene73557:CDS |
| TTCAATTCTCCAGAAAGTAA+TGG | 0.573973 | 6.4:+57900839 | None:intergenic |
| AGTGCATACGAAGCTAATGA+AGG | 0.577484 | 6.4:+57903570 | None:intergenic |
| TGTGACCCTGTGAAGCCAAA+AGG | 0.578109 | 6.4:+57897991 | None:intergenic |
| CAGTTAAAGTGCAAAACATG+CGG | 0.581372 | 6.4:-57903393 | MS.gene73557:CDS |
| AGGTGGAATTGCACCAATTG+GGG | 0.581694 | 6.4:-57900804 | MS.gene73557:CDS |
| TCACAGGGTCACAATCAGAT+GGG | 0.588057 | 6.4:-57897981 | MS.gene73557:CDS |
| TGTGGCGCCTAGAGAAGATA+GGG | 0.589096 | 6.4:-57899825 | MS.gene73557:CDS |
| AGCTTTCCACCACAAAATGA+TGG | 0.589747 | 6.4:-57899794 | MS.gene73557:CDS |
| CAATGCTTGGCGATGATGTG+TGG | 0.590954 | 6.4:-57899843 | MS.gene73557:CDS |
| GTTGCAGTTAAGGTGAGTCA+TGG | 0.593037 | 6.4:-57900731 | MS.gene73557:CDS |
| AGTAGAATACTCGACATTGA+AGG | 0.593478 | 6.4:-57901046 | MS.gene73557:CDS |
| ATTCAATAAATACATAGTGA+AGG | 0.602832 | 6.4:-57900879 | MS.gene73557:CDS |
| TGAACCCATTAATGTCCCTA+GGG | 0.602842 | 6.4:+57897935 | None:intergenic |
| CATACCTGTGAAAATTGGGA+GGG | 0.602874 | 6.4:+57901764 | None:intergenic |
| TCATACCTGTGAAAATTGGG+AGG | 0.603052 | 6.4:+57901763 | None:intergenic |
| GAATTGAACCTTACTATGAG+AGG | 0.607156 | 6.4:-57900824 | MS.gene73557:CDS |
| GAATGGTAAATTGAGGTCCA+CGG | 0.610553 | 6.4:+57899101 | None:intergenic |
| CAAGGTGTTAGGATTCAAGA+AGG | 0.616455 | 6.4:-57900701 | MS.gene73557:CDS |
| TTGAACCTTACTATGAGAGG+TGG | 0.618381 | 6.4:-57900821 | MS.gene73557:CDS |
| GCATGCAATGACTTGTGACA+TGG | 0.626229 | 6.4:-57899143 | MS.gene73557:CDS |
| ATTTGGTTAGGTGAGTGAAG+AGG | 0.632675 | 6.4:-57901904 | MS.gene73557:intron |
| ACATAGTGAAGGAAAGAACT+GGG | 0.634050 | 6.4:-57900868 | MS.gene73557:CDS |
| ATTAAGAATCCAAGCACCAA+GGG | 0.638386 | 6.4:-57901829 | MS.gene73557:CDS |
| CATTAAGAATCCAAGCACCA+AGG | 0.647255 | 6.4:-57901830 | MS.gene73557:CDS |
| TACAAATGGCTAGCAGTGAG+TGG | 0.650899 | 6.4:-57898059 | MS.gene73557:CDS |
| GGGACATTAATGGGTTCACA+AGG | 0.658302 | 6.4:-57897930 | MS.gene73557:CDS |
| ACCACAAAATGATGGCTAAG+GGG | 0.658660 | 6.4:-57899786 | MS.gene73557:CDS |
| AGCAAGATCTATAGGTACCG+TGG | 0.658732 | 6.4:-57899118 | MS.gene73557:CDS |
| GGTGACCTATTGATGGAAGG+TGG | 0.664907 | 6.4:+57901855 | None:intergenic |
| TGATACTCCAAAGCTAAGAG+AGG | 0.665341 | 6.4:-57899725 | MS.gene73557:intron |
| CATGCAATGACTTGTGACAT+GGG | 0.667953 | 6.4:-57899142 | MS.gene73557:CDS |
| GAAGGTGACCTATTGATGGA+AGG | 0.674542 | 6.4:+57901852 | None:intergenic |
| CACAGGGTCACAATCAGATG+GGG | 0.676341 | 6.4:-57897980 | MS.gene73557:CDS |
| TGGGGATGTCTGATAGAATG+TGG | 0.679640 | 6.4:-57899180 | MS.gene73557:CDS |
| TTTGTTGTTAAGGATCATCG+TGG | 0.682651 | 6.4:-57900665 | MS.gene73557:CDS |
| GATTCAAGAAGGCATGACTG+AGG | 0.696401 | 6.4:-57900690 | MS.gene73557:CDS |
| AATTATAGGTGATCAAACTG+TGG | 0.703154 | 6.4:-57898193 | MS.gene73557:intron |
| ATGCAATGACTTGTGACATG+GGG | 0.729736 | 6.4:-57899141 | MS.gene73557:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATTAGCATAAAAAT+AGG | + | chr6.4:57901921-57901940 | None:intergenic | 10.0% |
| !! | AATAATGACAAAAAAAAAAT+TGG | + | chr6.4:57900451-57900470 | None:intergenic | 10.0% |
| !! | AATCTAATATATTTAACTAA+AGG | + | chr6.4:57902293-57902312 | None:intergenic | 10.0% |
| !! | CATCTTATTAATATATTTAA+AGG | + | chr6.4:57901095-57901114 | None:intergenic | 10.0% |
| !! | CTTTAAATATATTAATAAGA+TGG | - | chr6.4:57901093-57901112 | MS.gene73557:intron | 10.0% |
| !! | TTTAATATGAACTTAATTAT+AGG | - | chr6.4:57903356-57903375 | MS.gene73557:CDS | 10.0% |
| !!! | AAATTCATTTTTACTAAAAA+TGG | + | chr6.4:57899077-57899096 | None:intergenic | 10.0% |
| !!! | AATGTTTTTTTTTAACAAAA+AGG | - | chr6.4:57898560-57898579 | MS.gene73557:intron | 10.0% |
| !!! | AGGTATATATTTTTATAATT+AGG | - | chr6.4:57901858-57901877 | MS.gene73557:CDS | 10.0% |
| !!! | ATGTTTTTTTTTAACAAAAA+GGG | - | chr6.4:57898561-57898580 | MS.gene73557:intron | 10.0% |
| !!! | GGTATATATTTTTATAATTA+GGG | - | chr6.4:57901859-57901878 | MS.gene73557:CDS | 10.0% |
| !!! | GTATATATTTTTATAATTAG+GGG | - | chr6.4:57901860-57901879 | MS.gene73557:CDS | 10.0% |
| !! | ACTTTATTATATGATTCATT+TGG | - | chr6.4:57899642-57899661 | MS.gene73557:intron | 15.0% |
| !! | ATACAAAAATATTGTTTGTT+GGG | + | chr6.4:57898344-57898363 | None:intergenic | 15.0% |
| !! | TATACAAAAATATTGTTTGT+TGG | + | chr6.4:57898345-57898364 | None:intergenic | 15.0% |
| !! | TTAATGATTTATACATGTAA+AGG | - | chr6.4:57901242-57901261 | MS.gene73557:intron | 15.0% |
| !! | TTAATTAAAGCTAATATCAA+TGG | - | chr6.4:57902505-57902524 | MS.gene73557:intron | 15.0% |
| !! | TTATATTTAGTATTTACAGA+AGG | - | chr6.4:57901459-57901478 | MS.gene73557:intron | 15.0% |
| !! | TTTACATGTATAAATCATTA+AGG | + | chr6.4:57901243-57901262 | None:intergenic | 15.0% |
| !!! | CATTAAATTCTTGTTTAAAA+AGG | - | chr6.4:57900102-57900121 | MS.gene73557:intron | 15.0% |
| !!! | CTGATTTTTTTAACTAAAAA+TGG | + | chr6.4:57898719-57898738 | None:intergenic | 15.0% |
| !!! | TGTTTTTTTTTAACAAAAAG+GGG | - | chr6.4:57898562-57898581 | MS.gene73557:intron | 15.0% |
| !!! | TTTTGAGATACTTAATAAAA+TGG | + | chr6.4:57903281-57903300 | None:intergenic | 15.0% |
| !! | AACATTTGTCTTTGTATAAT+AGG | - | chr6.4:57901386-57901405 | MS.gene73557:intron | 20.0% |
| !! | ACATTTGTCTTTGTATAATA+GGG | - | chr6.4:57901387-57901406 | MS.gene73557:intron | 20.0% |
| !! | ACCAATTAAAATGAAATTAG+AGG | + | chr6.4:57902661-57902680 | None:intergenic | 20.0% |
| !! | AGGATAATATCAAATATTGA+CGG | + | chr6.4:57898505-57898524 | None:intergenic | 20.0% |
| !! | ATAAATTCGGTAATCAAATT+TGG | + | chr6.4:57900420-57900439 | None:intergenic | 20.0% |
| !! | ATGATTAATTGAAAATACCT+TGG | + | chr6.4:57902803-57902822 | None:intergenic | 20.0% |
| !! | ATTATATGATTCATTTGGTT+AGG | - | chr6.4:57899647-57899666 | MS.gene73557:intron | 20.0% |
| !! | ATTCAATAAATACATAGTGA+AGG | - | chr6.4:57900684-57900703 | MS.gene73557:CDS | 20.0% |
| !! | ATTTAACATATTGGTCATAT+CGG | + | chr6.4:57903120-57903139 | None:intergenic | 20.0% |
| !! | GATTAAGTGATTATTCAAAT+TGG | - | chr6.4:57900067-57900086 | MS.gene73557:intron | 20.0% |
| !! | TACATGTAAAGGAATTTAAA+AGG | - | chr6.4:57901253-57901272 | MS.gene73557:intron | 20.0% |
| !! | TACCCTTTATTAAAATAAGA+TGG | - | chr6.4:57899133-57899152 | MS.gene73557:CDS | 20.0% |
| !! | TAGCATGATATATTATTGAT+TGG | - | chr6.4:57901000-57901019 | MS.gene73557:CDS | 20.0% |
| !! | TATATTGTACCTTATTCATT+TGG | + | chr6.4:57902561-57902580 | None:intergenic | 20.0% |
| !! | TATCATCAGAATCAATATTA+TGG | - | chr6.4:57903434-57903453 | MS.gene73557:intron | 20.0% |
| !! | TCGACTTTCATAATAAATAT+AGG | - | chr6.4:57899965-57899984 | MS.gene73557:intron | 20.0% |
| !! | TGATTAATTGAAAATACCTT+GGG | + | chr6.4:57902802-57902821 | None:intergenic | 20.0% |
| !! | TTAAATTTCCATATTTGTGA+TGG | - | chr6.4:57898910-57898929 | MS.gene73557:intron | 20.0% |
| !! | TTAGTTACATAAACAAAAGT+TGG | - | chr6.4:57899862-57899881 | MS.gene73557:CDS | 20.0% |
| !! | TTATTCTATATGCTAGATAT+TGG | - | chr6.4:57902634-57902653 | MS.gene73557:intron | 20.0% |
| !!! | AAAAGTCTTTTAGTTCTATT+AGG | - | chr6.4:57901964-57901983 | MS.gene73557:intron | 20.0% |
| !!! | AAACTACTATCTACATTTTA+TGG | - | chr6.4:57898078-57898097 | MS.gene73557:CDS | 20.0% |
| !!! | AGTCTCTCAAATAAATTTTA+AGG | + | chr6.4:57899191-57899210 | None:intergenic | 20.0% |
| !!! | ATTAAATTTTTCTTACCACT+GGG | - | chr6.4:57900468-57900487 | MS.gene73557:intron | 20.0% |
| !!! | ATTTATCTGAAATCAGATTT+TGG | - | chr6.4:57902357-57902376 | MS.gene73557:intron | 20.0% |
| !!! | ATTTTAAGGGTTGTTTAATA+TGG | + | chr6.4:57899177-57899196 | None:intergenic | 20.0% |
| !!! | GACCATCTTATTTTAATAAA+GGG | + | chr6.4:57899138-57899157 | None:intergenic | 20.0% |
| !!! | GCTTTAATTAATTTGCATAT+TGG | + | chr6.4:57902496-57902515 | None:intergenic | 20.0% |
| !!! | GTCTCTCAAATAAATTTTAA+GGG | + | chr6.4:57899190-57899209 | None:intergenic | 20.0% |
| !!! | GTTCATTAACATTTGTTTTT+AGG | - | chr6.4:57901354-57901373 | MS.gene73557:intron | 20.0% |
| !!! | GTTTTTTTTTAACAAAAAGG+GGG | - | chr6.4:57898563-57898582 | MS.gene73557:intron | 20.0% |
| !!! | TAACTCTGAAAATTTAGAAA+TGG | + | chr6.4:57902690-57902709 | None:intergenic | 20.0% |
| !!! | TAAGTTTAAGTTCATATTTG+CGG | + | chr6.4:57902095-57902114 | None:intergenic | 20.0% |
| !!! | TATTAAATTTTTCTTACCAC+TGG | - | chr6.4:57900467-57900486 | MS.gene73557:intron | 20.0% |
| !!! | TCATGACTATTTTTTTTTTG+TGG | + | chr6.4:57898890-57898909 | None:intergenic | 20.0% |
| !!! | TCCTCTAATTTCATTTTAAT+TGG | - | chr6.4:57902657-57902676 | MS.gene73557:intron | 20.0% |
| !!! | TGACCATCTTATTTTAATAA+AGG | + | chr6.4:57899139-57899158 | None:intergenic | 20.0% |
| !!! | TGTAGTATTATTTTACTTTG+TGG | - | chr6.4:57902610-57902629 | MS.gene73557:intron | 20.0% |
| !!! | TTCTTATTGGTTAAAAACAA+TGG | - | chr6.4:57899394-57899413 | MS.gene73557:intron | 20.0% |
| !!! | TTTATCTGAAATCAGATTTT+GGG | - | chr6.4:57902358-57902377 | MS.gene73557:intron | 20.0% |
| !!! | TTTTTTTTTCCTTTGATTGA+GGG | - | chr6.4:57900270-57900289 | MS.gene73557:intron | 20.0% |
| !!! | TTTTTTTTTTCCTTTGATTG+AGG | - | chr6.4:57900269-57900288 | MS.gene73557:intron | 20.0% |
| ! | AAGTGATTATTCAAATTGGA+TGG | - | chr6.4:57900071-57900090 | MS.gene73557:intron | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr6.4:57899382-57899401 | None:intergenic | 25.0% |
| ! | AGTTATATAGACAAATTGGT+TGG | - | chr6.4:57902705-57902724 | MS.gene73557:intron | 25.0% |
| ! | ATAAATGTATGTTGGATTTG+TGG | - | chr6.4:57900143-57900162 | MS.gene73557:intron | 25.0% |
| ! | ATATTCAAATCCTTTAGATG+AGG | - | chr6.4:57898935-57898954 | MS.gene73557:intron | 25.0% |
| ! | ATCACATAAATATATGCACA+AGG | - | chr6.4:57898842-57898861 | MS.gene73557:CDS | 25.0% |
| ! | ATTGGCAATGAGTATAAATT+CGG | + | chr6.4:57900433-57900452 | None:intergenic | 25.0% |
| ! | CTGAAAATTTAGAAATGGTA+TGG | + | chr6.4:57902685-57902704 | None:intergenic | 25.0% |
| ! | GTTAGTTAAGGAATTTAAGT+AGG | - | chr6.4:57901202-57901221 | MS.gene73557:intron | 25.0% |
| ! | TACTTATTTCCAACTAACTT+TGG | - | chr6.4:57901048-57901067 | MS.gene73557:CDS | 25.0% |
| ! | TCAGAGTTATATAGACAAAT+TGG | - | chr6.4:57902701-57902720 | MS.gene73557:intron | 25.0% |
| ! | TCTAAAGGATAAATGTATGT+TGG | - | chr6.4:57900135-57900154 | MS.gene73557:intron | 25.0% |
| ! | TCTATAGTACAACTAAAAGT+GGG | + | chr6.4:57901121-57901140 | None:intergenic | 25.0% |
| ! | TGTACTATAGACTATGAAAT+AGG | - | chr6.4:57901130-57901149 | MS.gene73557:intron | 25.0% |
| ! | TGTGCACAAATTTAACATAT+TGG | + | chr6.4:57903129-57903148 | None:intergenic | 25.0% |
| ! | TTAAAAAGACCAAAGTTAGT+TGG | + | chr6.4:57901060-57901079 | None:intergenic | 25.0% |
| ! | TTAACTAAAAATGGTGATCT+TGG | + | chr6.4:57898710-57898729 | None:intergenic | 25.0% |
| ! | TTAATGCAAGATTCATAGTT+AGG | + | chr6.4:57899539-57899558 | None:intergenic | 25.0% |
| ! | TTATGTAACTAACTCTCTAA+GGG | + | chr6.4:57899854-57899873 | None:intergenic | 25.0% |
| ! | TTTAATACTTTGATCCATGT+AGG | - | chr6.4:57898055-57898074 | MS.gene73557:CDS | 25.0% |
| ! | TTTATGTAACTAACTCTCTA+AGG | + | chr6.4:57899855-57899874 | None:intergenic | 25.0% |
| !! | ATACATATTTGGGTTTAATG+AGG | - | chr6.4:57898267-57898286 | MS.gene73557:intron | 25.0% |
| !! | ATAGGGTAAATGATTTTTGT+TGG | - | chr6.4:57901404-57901423 | MS.gene73557:intron | 25.0% |
| !! | ATTCTTCATGTTGAGATTTT+GGG | + | chr6.4:57899042-57899061 | None:intergenic | 25.0% |
| !! | CATTTTATAGCTGTTAGTTA+AGG | - | chr6.4:57901190-57901209 | MS.gene73557:intron | 25.0% |
| !! | CTAGCAATATTTTCTATAGA+TGG | + | chr6.4:57903464-57903483 | None:intergenic | 25.0% |
| !! | TACTCTTTTTGTAGTATGAA+TGG | + | chr6.4:57899318-57899337 | None:intergenic | 25.0% |
| !!! | AGGTTAATTTTTTTCTCTCA+TGG | - | chr6.4:57898287-57898306 | MS.gene73557:intron | 25.0% |
| !!! | CTTACCACTCTTTTAAAAAA+AGG | + | chr6.4:57898217-57898236 | None:intergenic | 25.0% |
| !!! | GGTTAATTTTTTTCTCTCAT+GGG | - | chr6.4:57898288-57898307 | MS.gene73557:intron | 25.0% |
| !!! | TATTTTTTTTTTGTGGTGGT+CGG | + | chr6.4:57898883-57898902 | None:intergenic | 25.0% |
| !!! | TGACTATTTTTTTTTTGTGG+TGG | + | chr6.4:57898887-57898906 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr6.4:57899381-57899400 | MS.gene73557:intron | 25.0% |
| !!! | TTTTTTAAGCCCGTATTTTT+TGG | - | chr6.4:57900313-57900332 | MS.gene73557:intron | 25.0% |
| !!! | TTTTTTTTCCTTTGATTGAG+GGG | - | chr6.4:57900271-57900290 | MS.gene73557:intron | 25.0% |
| AAACAAATTCATGTCAAGAG+TGG | - | chr6.4:57903180-57903199 | MS.gene73557:intron | 30.0% | |
| AAAGGAAATCCATTTGCATT+TGG | + | chr6.4:57903557-57903576 | None:intergenic | 30.0% | |
| AAGATGGTCAACTGTTAAAT+CGG | - | chr6.4:57899149-57899168 | MS.gene73557:CDS | 30.0% | |
| AATCAAATTTGGCAACTCTA+CGG | + | chr6.4:57900409-57900428 | None:intergenic | 30.0% | |
| AATCGGAGATTTCATATTGA+CGG | + | chr6.4:57899277-57899296 | None:intergenic | 30.0% | |
| AATTATAGGTGATCAAACTG+TGG | - | chr6.4:57903370-57903389 | MS.gene73557:CDS | 30.0% | |
| ACTAAACTATAATTCCTGAC+AGG | + | chr6.4:57901580-57901599 | None:intergenic | 30.0% | |
| AGTTTATTCAACCCTAGTAT+GGG | + | chr6.4:57898610-57898629 | None:intergenic | 30.0% | |
| AGTTTCATACCTGTGAAAAT+TGG | + | chr6.4:57899807-57899826 | None:intergenic | 30.0% | |
| ATAAATATATGCACAAGGTC+CGG | - | chr6.4:57898847-57898866 | MS.gene73557:CDS | 30.0% | |
| ATAAGATCATATACTCGTAC+TGG | - | chr6.4:57902907-57902926 | MS.gene73557:intron | 30.0% | |
| ATACACAAAATGGAATGAGT+TGG | - | chr6.4:57902734-57902753 | MS.gene73557:intron | 30.0% | |
| ATATATACCTCTCTTAGCTT+TGG | + | chr6.4:57901848-57901867 | None:intergenic | 30.0% | |
| ATGCTAATAGCACATGTTAA+AGG | + | chr6.4:57902267-57902286 | None:intergenic | 30.0% | |
| ATTCTACTACCTGTGAAAAT+TGG | + | chr6.4:57900505-57900524 | None:intergenic | 30.0% | |
| CTATAGTACAACTAAAAGTG+GGG | + | chr6.4:57901120-57901139 | None:intergenic | 30.0% | |
| GAATATGTCCATCACAAATA+TGG | + | chr6.4:57898921-57898940 | None:intergenic | 30.0% | |
| GGAAGTTTAGAGATAGAAAA+AGG | - | chr6.4:57899901-57899920 | MS.gene73557:intron | 30.0% | |
| GTACTTGAACCAAATGAATA+AGG | - | chr6.4:57902549-57902568 | MS.gene73557:intron | 30.0% | |
| GTCTATAGTACAACTAAAAG+TGG | + | chr6.4:57901122-57901141 | None:intergenic | 30.0% | |
| GTTGGAAGAAATAAGAAACA+AGG | - | chr6.4:57900239-57900258 | MS.gene73557:intron | 30.0% | |
| GTTTCATACCTGTGAAAATT+GGG | + | chr6.4:57899806-57899825 | None:intergenic | 30.0% | |
| TACAACTCTCATTCAACAAA+AGG | - | chr6.4:57899772-57899791 | MS.gene73557:CDS | 30.0% | |
| TCAACAAGACTTATGCTTAT+AGG | + | chr6.4:57900547-57900566 | None:intergenic | 30.0% | |
| TCTTATTCAACCACTATTGT+TGG | + | chr6.4:57898961-57898980 | None:intergenic | 30.0% | |
| TGACACATGCATACATATTT+GGG | - | chr6.4:57898257-57898276 | MS.gene73557:intron | 30.0% | |
| TGCACATGTTGAATTAGATT+TGG | + | chr6.4:57903158-57903177 | None:intergenic | 30.0% | |
| TTACGACATACTTTATGTGA+GGG | + | chr6.4:57898753-57898772 | None:intergenic | 30.0% | |
| TTAGCATAAAAATAGGCTCT+AGG | + | chr6.4:57901914-57901933 | None:intergenic | 30.0% | |
| TTCAATTCTCCAGAAAGTAA+TGG | + | chr6.4:57900727-57900746 | None:intergenic | 30.0% | |
| TTCAGAAGAATGGTAAATTG+AGG | + | chr6.4:57902472-57902491 | None:intergenic | 30.0% | |
| TTGACACATGCATACATATT+TGG | - | chr6.4:57898256-57898275 | MS.gene73557:intron | 30.0% | |
| TTTACGACATACTTTATGTG+AGG | + | chr6.4:57898754-57898773 | None:intergenic | 30.0% | |
| TTTGTTGAATGAGAGTTGTA+AGG | + | chr6.4:57899772-57899791 | None:intergenic | 30.0% | |
| ! | CATTCTTCATGTTGAGATTT+TGG | + | chr6.4:57899043-57899062 | None:intergenic | 30.0% |
| ! | TGAGCTTATTTCAGTTGATA+TGG | - | chr6.4:57898817-57898836 | MS.gene73557:CDS | 30.0% |
| !! | AATGCAAATGGATTTCCTTT+TGG | - | chr6.4:57903557-57903576 | MS.gene73557:intron | 30.0% |
| !! | GATGACTTAGTTTTTGAACT+CGG | - | chr6.4:57903023-57903042 | MS.gene73557:intron | 30.0% |
| !! | TCAGACACGCTTTAAATTTT+AGG | + | chr6.4:57898525-57898544 | None:intergenic | 30.0% |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr6.4:57899479-57899498 | None:intergenic | 30.0% |
| !!! | AGGTAGAGTTGGTTTTTTTT+AGG | + | chr6.4:57899519-57899538 | None:intergenic | 30.0% |
| !!! | ATTTTTTTCTCTCATGGGTA+AGG | - | chr6.4:57898293-57898312 | MS.gene73557:intron | 30.0% |
| !!! | ATTTTTTTTTTGTGGTGGTC+GGG | + | chr6.4:57898882-57898901 | None:intergenic | 30.0% |
| !!! | GGAACCTTTTTTTAAAAGAG+TGG | - | chr6.4:57898210-57898229 | MS.gene73557:intron | 30.0% |
| !!! | TTTTTTTCCTTTGATTGAGG+GGG | - | chr6.4:57900272-57900291 | MS.gene73557:intron | 30.0% |
| !!! | TTTTTTTCTCTCATGGGTAA+GGG | - | chr6.4:57898294-57898313 | MS.gene73557:intron | 30.0% |
| AAAACAATGGAGAGAGAGAA+AGG | - | chr6.4:57899407-57899426 | MS.gene73557:intron | 35.0% | |
| AAAGGAGAACTAGAGTCTAA+AGG | - | chr6.4:57900120-57900139 | MS.gene73557:intron | 35.0% | |
| AATCCATGTATTCACGTAGT+TGG | - | chr6.4:57902972-57902991 | MS.gene73557:intron | 35.0% | |
| AATGTATGTTGGATTTGTGG+TGG | - | chr6.4:57900146-57900165 | MS.gene73557:intron | 35.0% | |
| ACATAGTGAAGGAAAGAACT+GGG | - | chr6.4:57900695-57900714 | MS.gene73557:CDS | 35.0% | |
| AGCTAAAAAAGACCCATACT+AGG | - | chr6.4:57898595-57898614 | MS.gene73557:intron | 35.0% | |
| AGTAGAATACTCGACATTGA+AGG | - | chr6.4:57900517-57900536 | MS.gene73557:intron | 35.0% | |
| AGTTAAAGTGCAAAACATGC+GGG | - | chr6.4:57898171-57898190 | MS.gene73557:CDS | 35.0% | |
| ATCTCAACATGAAGAATGCA+AGG | - | chr6.4:57899045-57899064 | MS.gene73557:CDS | 35.0% | |
| ATTAAGAATCCAAGCACCAA+GGG | - | chr6.4:57899734-57899753 | MS.gene73557:CDS | 35.0% | |
| CACATGATGAAAATGAGAAC+TGG | - | chr6.4:57900650-57900669 | MS.gene73557:intron | 35.0% | |
| CAGTTAAAGTGCAAAACATG+CGG | - | chr6.4:57898170-57898189 | MS.gene73557:CDS | 35.0% | |
| CGACTAAATTAGAGATCGAT+AGG | + | chr6.4:57900382-57900401 | None:intergenic | 35.0% | |
| GAATTGAACCTTACTATGAG+AGG | - | chr6.4:57900739-57900758 | MS.gene73557:CDS | 35.0% | |
| GAGTTTATTCAACCCTAGTA+TGG | + | chr6.4:57898611-57898630 | None:intergenic | 35.0% | |
| GATTCATAGTTAGGTAGAGT+TGG | + | chr6.4:57899530-57899549 | None:intergenic | 35.0% | |
| GCATATTGGATTCAGAAGAA+TGG | + | chr6.4:57902482-57902501 | None:intergenic | 35.0% | |
| GCCAAGCAATAATGTACAAA+TGG | - | chr6.4:57903490-57903509 | MS.gene73557:intron | 35.0% | |
| GCCATTTGTACATTATTGCT+TGG | + | chr6.4:57903494-57903513 | None:intergenic | 35.0% | |
| GCTAAAAAAGACCCATACTA+GGG | - | chr6.4:57898596-57898615 | MS.gene73557:intron | 35.0% | |
| GTAGATAGTAGTTTCCTACA+TGG | + | chr6.4:57898072-57898091 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr6.4:57899474-57899493 | MS.gene73557:intron | 35.0% | |
| TAAATATATGCACAAGGTCC+GGG | - | chr6.4:57898848-57898867 | MS.gene73557:CDS | 35.0% | |
| TAATGAAGGTGACCTATTGA+TGG | + | chr6.4:57899718-57899737 | None:intergenic | 35.0% | |
| TACATAGTGAAGGAAAGAAC+TGG | - | chr6.4:57900694-57900713 | MS.gene73557:CDS | 35.0% | |
| TAGCCATAACATCTGTTAAG+AGG | - | chr6.4:57898633-57898652 | MS.gene73557:intron | 35.0% | |
| TGTCCTCTTAACAGATGTTA+TGG | + | chr6.4:57898639-57898658 | None:intergenic | 35.0% | |
| TTGAATGAGAGTTGTAAGGT+TGG | + | chr6.4:57899768-57899787 | None:intergenic | 35.0% | |
| TTGTAGTATGAATGGCTATG+CGG | + | chr6.4:57899310-57899329 | None:intergenic | 35.0% | |
| ! | AACATTGCTTTGTTAACCCA+AGG | - | chr6.4:57902783-57902802 | MS.gene73557:intron | 35.0% |
| ! | AATGAGTTGGAGGAAATTGA+TGG | - | chr6.4:57902747-57902766 | MS.gene73557:intron | 35.0% |
| ! | ATCAAATATTGACGGACATC+TGG | + | chr6.4:57898497-57898516 | None:intergenic | 35.0% |
| ! | ATGGAAGTAATCAAGGTGTT+AGG | - | chr6.4:57900851-57900870 | MS.gene73557:CDS | 35.0% |
| ! | CAGTTCTCATTTTCATCATG+TGG | + | chr6.4:57900652-57900671 | None:intergenic | 35.0% |
| ! | CATATTGGTCATATCGGTTA+AGG | + | chr6.4:57903114-57903133 | None:intergenic | 35.0% |
| ! | GTTGGAATTTGAAATAGCGA+CGG | - | chr6.4:57899880-57899899 | MS.gene73557:intron | 35.0% |
| ! | TATAAGCATTTTTGCCTGTC+AGG | - | chr6.4:57901563-57901582 | MS.gene73557:intron | 35.0% |
| ! | TGAAATCAGATTTTGGGCAT+GGG | - | chr6.4:57902364-57902383 | MS.gene73557:intron | 35.0% |
| ! | TTGGAGAAGCATACACAAAA+TGG | - | chr6.4:57902724-57902743 | MS.gene73557:intron | 35.0% |
| ! | TTGTTGCGACACATTTTTGT+AGG | + | chr6.4:57901496-57901515 | None:intergenic | 35.0% |
| !! | AAAATAGGCTCTAGGAAATG+TGG | + | chr6.4:57901906-57901925 | None:intergenic | 35.0% |
| !! | ACCACAATCTCTAGCTTTAT+AGG | + | chr6.4:57900613-57900632 | None:intergenic | 35.0% |
| !! | ATCTCTAGCTTTATAGGGTA+AGG | + | chr6.4:57900607-57900626 | None:intergenic | 35.0% |
| !! | CCACAATCTCTAGCTTTATA+GGG | + | chr6.4:57900612-57900631 | None:intergenic | 35.0% |
| !! | GAAGACTTGTTGGAACAATT+TGG | + | chr6.4:57900585-57900604 | None:intergenic | 35.0% |
| !! | TTTGTTGTTAAGGATCATCG+TGG | - | chr6.4:57900898-57900917 | MS.gene73557:CDS | 35.0% |
| !!! | GAGATTTTGGGTTTATATCG+TGG | + | chr6.4:57899030-57899049 | None:intergenic | 35.0% |
| !!! | TTTAAGCCCGTATTTTTTGG+TGG | - | chr6.4:57900316-57900335 | MS.gene73557:intron | 35.0% |
| !!! | TTTTTTTTTTGTGGTGGTCG+GGG | + | chr6.4:57898881-57898900 | None:intergenic | 35.0% |
| AAACATCATCCACCAATGCT+TGG | - | chr6.4:57901707-57901726 | MS.gene73557:intron | 40.0% | |
| AAATATATGCACAAGGTCCG+GGG | - | chr6.4:57898849-57898868 | MS.gene73557:CDS | 40.0% | |
| AACATCTGTTAAGAGGACAG+AGG | - | chr6.4:57898640-57898659 | MS.gene73557:intron | 40.0% | |
| AAGGCAAAAAATCGATCTCC+AGG | - | chr6.4:57899920-57899939 | MS.gene73557:intron | 40.0% | |
| ACACACCACATGCTTAAATC+CGG | - | chr6.4:57898984-57899003 | MS.gene73557:intron | 40.0% | |
| ACACCTTCTTCGTAGAGATT+AGG | + | chr6.4:57898784-57898803 | None:intergenic | 40.0% | |
| ACCACAAAATGATGGCTAAG+GGG | - | chr6.4:57901777-57901796 | MS.gene73557:CDS | 40.0% | |
| ACCACAACACCAAATGCAAA+TGG | - | chr6.4:57903545-57903564 | MS.gene73557:intron | 40.0% | |
| ACTGTTGCTGGATGATTGTT+TGG | + | chr6.4:57903404-57903423 | None:intergenic | 40.0% | |
| AGCCTACAATTTCATAGGGA+CGG | + | chr6.4:57899946-57899965 | None:intergenic | 40.0% | |
| AGCTGAGCCACCAAAAAATA+CGG | + | chr6.4:57900326-57900345 | None:intergenic | 40.0% | |
| AGCTTTCCACCACAAAATGA+TGG | - | chr6.4:57901769-57901788 | MS.gene73557:CDS | 40.0% | |
| AGTCGAGCCTACAATTTCAT+AGG | + | chr6.4:57899951-57899970 | None:intergenic | 40.0% | |
| AGTGCATACGAAGCTAATGA+AGG | + | chr6.4:57897996-57898015 | None:intergenic | 40.0% | |
| AGTTCACAGATAACTCTAGC+TGG | - | chr6.4:57900788-57900807 | MS.gene73557:CDS | 40.0% | |
| ATAGGGTAAGGAAGACTTGT+TGG | + | chr6.4:57900595-57900614 | None:intergenic | 40.0% | |
| ATGCCAACTACGTGAATACA+TGG | + | chr6.4:57902978-57902997 | None:intergenic | 40.0% | |
| ATTTGGTTAGGTGAGTGAAG+AGG | - | chr6.4:57899659-57899678 | MS.gene73557:intron | 40.0% | |
| CAAAGAAGTAGCGTTGTTGT+TGG | - | chr6.4:57900221-57900240 | MS.gene73557:intron | 40.0% | |
| CAATTCCACCTCTCATAGTA+AGG | + | chr6.4:57900750-57900769 | None:intergenic | 40.0% | |
| CACCACAAAATGATGGCTAA+GGG | - | chr6.4:57901776-57901795 | MS.gene73557:CDS | 40.0% | |
| CATACCTGTGAAAATTGGGA+GGG | + | chr6.4:57899802-57899821 | None:intergenic | 40.0% | |
| CATCTTTCCCTATCTTCTCT+AGG | + | chr6.4:57901748-57901767 | None:intergenic | 40.0% | |
| CATTAAGAATCCAAGCACCA+AGG | - | chr6.4:57899733-57899752 | MS.gene73557:CDS | 40.0% | |
| CATTCTTGGGGATGTGTAAA+CGG | + | chr6.4:57900357-57900376 | None:intergenic | 40.0% | |
| CATTGCAGCTAGCTAACTAA+AGG | + | chr6.4:57899241-57899260 | None:intergenic | 40.0% | |
| CCAATACAACATGTCTTGTG+TGG | + | chr6.4:57902947-57902966 | None:intergenic | 40.0% | |
| CCACACAAGACATGTTGTAT+TGG | - | chr6.4:57902944-57902963 | MS.gene73557:intron | 40.0% | |
| CCCTATAAAGCTAGAGATTG+TGG | - | chr6.4:57900609-57900628 | MS.gene73557:intron | 40.0% | |
| CTAGAGAAGATAGGGAAAGA+TGG | - | chr6.4:57901746-57901765 | MS.gene73557:intron | 40.0% | |
| CTAGAGATTGTGGTACTTGA+TGG | - | chr6.4:57900619-57900638 | MS.gene73557:intron | 40.0% | |
| GAATGGTAAATTGAGGTCCA+CGG | + | chr6.4:57902465-57902484 | None:intergenic | 40.0% | |
| GATAAAGTGCAGGAAGTTCA+GGG | - | chr6.4:57900810-57900829 | MS.gene73557:CDS | 40.0% | |
| GATCTCATTCGTTTGTCGTT+TGG | + | chr6.4:57897966-57897985 | None:intergenic | 40.0% | |
| GGGCTTCACTCAAAATAACA+AGG | - | chr6.4:57898675-57898694 | MS.gene73557:intron | 40.0% | |
| GGTGCTTGGATTCTTAATGA+AGG | + | chr6.4:57899732-57899751 | None:intergenic | 40.0% | |
| GTCGAGCCTACAATTTCATA+GGG | + | chr6.4:57899950-57899969 | None:intergenic | 40.0% | |
| GTGAGTCATGGAAGTAATCA+AGG | - | chr6.4:57900844-57900863 | MS.gene73557:CDS | 40.0% | |
| GTTTACACATCCCCAAGAAT+GGG | - | chr6.4:57900356-57900375 | MS.gene73557:intron | 40.0% | |
| TATGTTGTTGCTACTGTTGC+TGG | + | chr6.4:57903416-57903435 | None:intergenic | 40.0% | |
| TCAACTGAAATAAGCTCACG+AGG | + | chr6.4:57898815-57898834 | None:intergenic | 40.0% | |
| TCATACCTGTGAAAATTGGG+AGG | + | chr6.4:57899803-57899822 | None:intergenic | 40.0% | |
| TGAACCCATTAATGTCCCTA+GGG | + | chr6.4:57903631-57903650 | None:intergenic | 40.0% | |
| TGATACTCCAAAGCTAAGAG+AGG | - | chr6.4:57901838-57901857 | MS.gene73557:CDS | 40.0% | |
| TGTGTGTCTTGAGTAGTAGA+TGG | + | chr6.4:57902588-57902607 | None:intergenic | 40.0% | |
| TTAGATGAGGCCAACAATAG+TGG | - | chr6.4:57898948-57898967 | MS.gene73557:intron | 40.0% | |
| TTGAACCTTACTATGAGAGG+TGG | - | chr6.4:57900742-57900761 | MS.gene73557:CDS | 40.0% | |
| TTGAAGTTGTGTTGGGATAC+CGG | + | chr6.4:57899006-57899025 | None:intergenic | 40.0% | |
| ! | AACTTCGCTCCAATTTTCAC+AGG | - | chr6.4:57900493-57900512 | MS.gene73557:intron | 40.0% |
| ! | ATCGTGGTTTGAAGTTGTGT+TGG | + | chr6.4:57899014-57899033 | None:intergenic | 40.0% |
| ! | ATGCAATGACTTGTGACATG+GGG | - | chr6.4:57902422-57902441 | MS.gene73557:intron | 40.0% |
| ! | CAAAACATGCGGGACTTTTT+AGG | - | chr6.4:57898181-57898200 | MS.gene73557:CDS | 40.0% |
| ! | CAAGGTGTTAGGATTCAAGA+AGG | - | chr6.4:57900862-57900881 | MS.gene73557:CDS | 40.0% |
| ! | CACAAAATGGAATGAGTTGG+AGG | - | chr6.4:57902737-57902756 | MS.gene73557:intron | 40.0% |
| ! | CATGCAATGACTTGTGACAT+GGG | - | chr6.4:57902421-57902440 | MS.gene73557:intron | 40.0% |
| ! | CTATTGTTGGCCTCATCTAA+AGG | + | chr6.4:57898948-57898967 | None:intergenic | 40.0% |
| ! | CTGAAATCAGATTTTGGGCA+TGG | - | chr6.4:57902363-57902382 | MS.gene73557:intron | 40.0% |
| ! | GAAATCAGATTTTGGGCATG+GGG | - | chr6.4:57902365-57902384 | MS.gene73557:intron | 40.0% |
| ! | GATCATATACTCGTACTGGT+TGG | - | chr6.4:57902911-57902930 | MS.gene73557:intron | 40.0% |
| ! | GTAACTAACTCTCTAAGGGT+TGG | + | chr6.4:57899850-57899869 | None:intergenic | 40.0% |
| ! | TCGTGGTTTGAAGTTGTGTT+GGG | + | chr6.4:57899013-57899032 | None:intergenic | 40.0% |
| !! | GACTGAGGCATTTGTTGTTA+AGG | - | chr6.4:57900888-57900907 | MS.gene73557:CDS | 40.0% |
| !! | TCCATTTGCATTTGGTGTTG+TGG | + | chr6.4:57903549-57903568 | None:intergenic | 40.0% |
| !! | TGCATTTGGTGTTGTGGTAT+AGG | + | chr6.4:57903543-57903562 | None:intergenic | 40.0% |
| !!! | GATTTCCTTTTGGCTTCACA+GGG | - | chr6.4:57903567-57903586 | MS.gene73557:intron | 40.0% |
| !!! | TATTTTTTGGTGGCTCAGCT+CGG | - | chr6.4:57900326-57900345 | MS.gene73557:intron | 40.0% |
| ACATGGGGAGCAAGATCTAT+AGG | - | chr6.4:57902437-57902456 | MS.gene73557:intron | 45.0% | |
| ACTCTAGCTGGATAAAGTGC+AGG | - | chr6.4:57900800-57900819 | MS.gene73557:CDS | 45.0% | |
| AGAGGTGGAATTGCACCAAT+TGG | - | chr6.4:57900757-57900776 | MS.gene73557:CDS | 45.0% | |
| AGATCGATAGGCCCATTCTT+GGG | + | chr6.4:57900370-57900389 | None:intergenic | 45.0% | |
| AGGTGGAATTGCACCAATTG+GGG | - | chr6.4:57900759-57900778 | MS.gene73557:CDS | 45.0% | |
| CAGCTAGCTAACTAAAGGTG+GGG | + | chr6.4:57899236-57899255 | None:intergenic | 45.0% | |
| CCACCACAAAATGATGGCTA+AGG | - | chr6.4:57901775-57901794 | MS.gene73557:CDS | 45.0% | |
| CCACCTAATCTCTACGAAGA+AGG | - | chr6.4:57898778-57898797 | MS.gene73557:intron | 45.0% | |
| CCTTCTTCGTAGAGATTAGG+TGG | + | chr6.4:57898781-57898800 | None:intergenic | 45.0% | |
| CGTTTACACATCCCCAAGAA+TGG | - | chr6.4:57900355-57900374 | MS.gene73557:intron | 45.0% | |
| CTGTCCCTAGGGACATTAAT+GGG | - | chr6.4:57903624-57903643 | MS.gene73557:CDS | 45.0% | |
| GAAGAGGTGGATAGAGCAAT+TGG | - | chr6.4:57899675-57899694 | MS.gene73557:intron | 45.0% | |
| GAAGGTGACCTATTGATGGA+AGG | + | chr6.4:57899714-57899733 | None:intergenic | 45.0% | |
| GAAGTTCAGGGTTGCAGTTA+AGG | - | chr6.4:57900822-57900841 | MS.gene73557:CDS | 45.0% | |
| GAGGTGGAATTGCACCAATT+GGG | - | chr6.4:57900758-57900777 | MS.gene73557:CDS | 45.0% | |
| GCAGCTAGCTAACTAAAGGT+GGG | + | chr6.4:57899237-57899256 | None:intergenic | 45.0% | |
| GCTGAGCCACCAAAAAATAC+GGG | + | chr6.4:57900325-57900344 | None:intergenic | 45.0% | |
| GCTTTCCACCTTCCATCAAT+AGG | - | chr6.4:57899703-57899722 | MS.gene73557:intron | 45.0% | |
| GGATAAAGTGCAGGAAGTTC+AGG | - | chr6.4:57900809-57900828 | MS.gene73557:CDS | 45.0% | |
| GGATACCGGATTTAAGCATG+TGG | + | chr6.4:57898992-57899011 | None:intergenic | 45.0% | |
| GGGAAGAGACCATTACTTTC+TGG | - | chr6.4:57900715-57900734 | MS.gene73557:CDS | 45.0% | |
| GTGAACCCATTAATGTCCCT+AGG | + | chr6.4:57903632-57903651 | None:intergenic | 45.0% | |
| GTGAACTCTATGTCCCCAAT+TGG | + | chr6.4:57900775-57900794 | None:intergenic | 45.0% | |
| GTTGCAGTTAAGGTGAGTCA+TGG | - | chr6.4:57900832-57900851 | MS.gene73557:CDS | 45.0% | |
| TACAAATGGCTAGCAGTGAG+TGG | - | chr6.4:57903504-57903523 | MS.gene73557:intron | 45.0% | |
| TATGCGGAGACTTCTGCAAT+CGG | + | chr6.4:57899294-57899313 | None:intergenic | 45.0% | |
| TCACAGGGTCACAATCAGAT+GGG | - | chr6.4:57903582-57903601 | MS.gene73557:CDS | 45.0% | |
| TCTGTCCCTAGGGACATTAA+TGG | - | chr6.4:57903623-57903642 | MS.gene73557:CDS | 45.0% | |
| TGCAGCTAGCTAACTAAAGG+TGG | + | chr6.4:57899238-57899257 | None:intergenic | 45.0% | |
| TGGGGATGTCTGATAGAATG+TGG | - | chr6.4:57902383-57902402 | MS.gene73557:intron | 45.0% | |
| TTCACAGGGTCACAATCAGA+TGG | - | chr6.4:57903581-57903600 | MS.gene73557:CDS | 45.0% | |
| TTTCCTTTGATTGAGGGGGT+GGG | - | chr6.4:57900276-57900295 | MS.gene73557:intron | 45.0% | |
| ! | AAGGTTGGTTGTTGATCCCT+TGG | + | chr6.4:57899753-57899772 | None:intergenic | 45.0% |
| ! | ACCTTCAAGTTCTGTCCCTA+GGG | - | chr6.4:57903613-57903632 | MS.gene73557:CDS | 45.0% |
| ! | AGCAAGATCTATAGGTACCG+TGG | - | chr6.4:57902445-57902464 | MS.gene73557:intron | 45.0% |
| ! | CCTTAGCCATCATTTTGTGG+TGG | + | chr6.4:57901778-57901797 | None:intergenic | 45.0% |
| ! | CTTTCCCTCCCAATTTTCAC+AGG | - | chr6.4:57899795-57899814 | MS.gene73557:CDS | 45.0% |
| ! | GATTCAAGAAGGCATGACTG+AGG | - | chr6.4:57900873-57900892 | MS.gene73557:CDS | 45.0% |
| ! | GCATGCAATGACTTGTGACA+TGG | - | chr6.4:57902420-57902439 | MS.gene73557:intron | 45.0% |
| ! | TCCCCTTAGCCATCATTTTG+TGG | + | chr6.4:57901781-57901800 | None:intergenic | 45.0% |
| ! | TTTTCCTTTGATTGAGGGGG+TGG | - | chr6.4:57900275-57900294 | MS.gene73557:intron | 45.0% |
| !! | GGGACATTAATGGGTTCACA+AGG | - | chr6.4:57903633-57903652 | MS.gene73557:CDS | 45.0% |
| !!! | GGATTTCCTTTTGGCTTCAC+AGG | - | chr6.4:57903566-57903585 | MS.gene73557:intron | 45.0% |
| ACAATTTCATAGGGACGGCC+TGG | + | chr6.4:57899941-57899960 | None:intergenic | 50.0% | |
| AGGACAGAGGCCATATCAAG+AGG | - | chr6.4:57898653-57898672 | MS.gene73557:intron | 50.0% | |
| ATACCCACCCCCTCAATCAA+AGG | + | chr6.4:57900282-57900301 | None:intergenic | 50.0% | |
| CAATGCTTGGCGATGATGTG+TGG | - | chr6.4:57901720-57901739 | MS.gene73557:intron | 50.0% | |
| CACACATCATCGCCAAGCAT+TGG | + | chr6.4:57901722-57901741 | None:intergenic | 50.0% | |
| CACAGGGTCACAATCAGATG+GGG | - | chr6.4:57903583-57903602 | MS.gene73557:CDS | 50.0% | |
| GACAGAGGCCATATCAAGAG+GGG | - | chr6.4:57898655-57898674 | MS.gene73557:intron | 50.0% | |
| GAGATCGATAGGCCCATTCT+TGG | + | chr6.4:57900371-57900390 | None:intergenic | 50.0% | |
| GAGTGAAGCCCCTCTTGATA+TGG | + | chr6.4:57898666-57898685 | None:intergenic | 50.0% | |
| GATCGATAGGCCCATTCTTG+GGG | + | chr6.4:57900369-57900388 | None:intergenic | 50.0% | |
| GGACAGAGGCCATATCAAGA+GGG | - | chr6.4:57898654-57898673 | MS.gene73557:intron | 50.0% | |
| GGCCGTCCCTATGAAATTGT+AGG | - | chr6.4:57899941-57899960 | MS.gene73557:intron | 50.0% | |
| GGTGACCTATTGATGGAAGG+TGG | + | chr6.4:57899711-57899730 | None:intergenic | 50.0% | |
| TCCCTAGGGACAGAACTTGA+AGG | + | chr6.4:57903617-57903636 | None:intergenic | 50.0% | |
| TCTCTCATGGGTAAGGGTTG+TGG | - | chr6.4:57898300-57898319 | MS.gene73557:intron | 50.0% | |
| TGGTTAGGTGAGTGAAGAGG+TGG | - | chr6.4:57899662-57899681 | MS.gene73557:intron | 50.0% | |
| TGTGACCCTGTGAAGCCAAA+AGG | + | chr6.4:57903575-57903594 | None:intergenic | 50.0% | |
| TGTGGCGCCTAGAGAAGATA+GGG | - | chr6.4:57901738-57901757 | MS.gene73557:intron | 50.0% | |
| TTGGAGCGAAGTTAACCCAG+TGG | + | chr6.4:57900486-57900505 | None:intergenic | 50.0% | |
| ! | CACCTTCAAGTTCTGTCCCT+AGG | - | chr6.4:57903612-57903631 | MS.gene73557:CDS | 50.0% |
| !! | ACATCATCGCCAAGCATTGG+TGG | + | chr6.4:57901719-57901738 | None:intergenic | 50.0% |
| !! | GCGGGACTTTTTAGGAGCTT+TGG | - | chr6.4:57898189-57898208 | MS.gene73557:intron | 50.0% |
| !! | GTTGTTGATCCCTTGGTGCT+TGG | + | chr6.4:57899746-57899765 | None:intergenic | 50.0% |
| CTCATGGGTAAGGGTTGTGG+TGG | - | chr6.4:57898303-57898322 | MS.gene73557:intron | 55.0% | |
| GTGTGGCGCCTAGAGAAGAT+AGG | - | chr6.4:57901737-57901756 | MS.gene73557:intron | 55.0% | |
| TGGTGGTTACCAGTGTGCAG+CGG | - | chr6.4:57900163-57900182 | MS.gene73557:intron | 55.0% | |
| GGTGGTCGGGGTTTGAACCC+CGG | + | chr6.4:57898869-57898888 | None:intergenic | 65.0% | |
| TACCAGTGTGCAGCGGCACG+CGG | - | chr6.4:57900170-57900189 | MS.gene73557:intron | 65.0% | |
| CGCGGCTGAGAGAACGCGAG+AGG | - | chr6.4:57900188-57900207 | MS.gene73557:intron | 70.0% | |
| ! | AGCCGCGTGCCGCTGCACAC+TGG | + | chr6.4:57900175-57900194 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 57897921 | 57903664 | 57897921 | ID=MS.gene73557 |
| chr6.4 | mRNA | 57897921 | 57903664 | 57897921 | ID=MS.gene73557.t1;Parent=MS.gene73557 |
| chr6.4 | exon | 57903579 | 57903664 | 57903579 | ID=MS.gene73557.t1.exon1;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57903579 | 57903664 | 57903579 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57903354 | 57903429 | 57903354 | ID=MS.gene73557.t1.exon2;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57903354 | 57903429 | 57903354 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57901769 | 57901916 | 57901769 | ID=MS.gene73557.t1.exon3;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57901769 | 57901916 | 57901769 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57900660 | 57901070 | 57900660 | ID=MS.gene73557.t1.exon4;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57900660 | 57901070 | 57900660 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57899726 | 57899886 | 57899726 | ID=MS.gene73557.t1.exon5;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57899726 | 57899886 | 57899726 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57899015 | 57899212 | 57899015 | ID=MS.gene73557.t1.exon6;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57899015 | 57899212 | 57899015 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57898781 | 57898880 | 57898781 | ID=MS.gene73557.t1.exon7;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57898781 | 57898880 | 57898781 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| chr6.4 | exon | 57897921 | 57898207 | 57897921 | ID=MS.gene73557.t1.exon8;Parent=MS.gene73557.t1 |
| chr6.4 | CDS | 57897921 | 57898207 | 57897921 | ID=cds.MS.gene73557.t1;Parent=MS.gene73557.t1 |
| Gene Sequence |
| Protein sequence |
