AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene74246

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74246.t1 MTR_1g116660 97.070 512 9 2 1 510 1 508 0.0 992
MS.gene74246.t1 MTR_7g005910 78.175 504 100 2 1 504 1 494 0.0 782
MS.gene74246.t1 MTR_3g084110 70.140 499 140 2 6 504 1 490 0.0 721
MS.gene74246.t1 MTR_1g116650 73.214 504 112 4 1 504 47 527 0.0 717
MS.gene74246.t1 MTR_5g077580 47.339 545 190 6 28 487 21 553 4.47e-165 479
MS.gene74246.t1 MTR_2g049020 56.284 366 149 2 21 375 6 371 1.67e-137 409
MS.gene74246.t1 MTR_2g049020 55.118 127 57 0 378 504 447 573 2.08e-37 145
MS.gene74246.t1 MTR_2g048720 54.821 363 156 1 21 375 6 368 2.54e-126 380
MS.gene74246.t1 MTR_2g048720 59.813 107 43 0 381 487 447 553 4.15e-29 121
MS.gene74246.t1 MTR_2g026160 56.303 357 150 2 29 379 23 379 2.45e-125 378
MS.gene74246.t1 MTR_2g026160 55.446 101 45 0 381 481 453 553 5.38e-26 112
MS.gene74246.t1 MTR_2g026140 50.708 353 153 3 29 375 23 360 4.97e-105 325
MS.gene74246.t1 MTR_2g026140 53.465 101 47 0 381 481 438 538 2.17e-20 94.7
MS.gene74246.t1 MTR_6g018790 36.175 481 288 7 2 481 77 539 1.86e-84 271
MS.gene74246.t1 MTR_2g013310 35.685 482 287 5 30 505 50 514 3.60e-84 270
MS.gene74246.t1 MTR_7g082270 36.831 467 274 8 18 481 51 499 1.07e-83 268
MS.gene74246.t1 MTR_4g072030 32.573 482 296 8 18 481 14 484 7.31e-78 253
MS.gene74246.t1 MTR_2g013310 35.371 458 273 5 54 505 1 441 1.46e-77 250
MS.gene74246.t1 MTR_7g446340 32.988 482 298 6 18 487 37 505 2.62e-77 252
MS.gene74246.t1 MTR_6g007340 32.988 482 298 6 18 487 37 505 2.62e-77 252
MS.gene74246.t1 MTR_4g069500 31.923 520 311 13 18 509 17 521 3.06e-75 246
MS.gene74246.t1 MTR_8g077890 33.605 491 295 8 30 499 16 496 1.74e-74 244
MS.gene74246.t1 MTR_3g116240 32.558 473 289 7 30 481 25 488 1.80e-72 239
MS.gene74246.t1 MTR_5g075300 33.264 484 297 6 30 494 16 492 4.52e-71 235
MS.gene74246.t1 MTR_7g082270 37.198 414 239 8 18 428 51 446 1.45e-70 233
MS.gene74246.t1 MTR_4g077740 33.478 460 268 9 43 481 55 497 1.50e-69 231
MS.gene74246.t1 MTR_4g069500 31.612 484 290 12 54 509 1 471 8.36e-67 223
MS.gene74246.t1 MTR_6g088450 30.983 468 294 7 22 474 47 500 1.04e-64 219
MS.gene74246.t1 MTR_1g022315 33.551 459 281 11 33 485 49 489 1.67e-64 217
MS.gene74246.t1 MTR_8g077310 32.962 449 278 9 39 482 53 483 1.14e-63 215
MS.gene74246.t1 MTR_5g077590 37.318 343 142 6 188 475 63 387 1.28e-63 213
MS.gene74246.t1 MTR_8g103500 31.447 477 305 6 22 486 7 473 1.35e-63 215
MS.gene74246.t1 MTR_5g020270 32.373 451 284 9 39 485 56 489 3.99e-63 214
MS.gene74246.t1 MTR_3g080240 31.957 460 292 8 31 488 95 535 4.95e-63 214
MS.gene74246.t1 MTR_1g022315 35.500 400 239 10 87 481 1 386 1.05e-62 210
MS.gene74246.t1 MTR_4g118610 34.298 449 266 11 39 481 58 483 1.78e-62 212
MS.gene74246.t1 MTR_7g094450 33.705 448 269 9 39 481 46 470 2.43e-61 209
MS.gene74246.t1 MTR_5g020270 33.417 398 249 7 87 481 1 385 4.39e-61 206
MS.gene74246.t1 MTR_8g077310 33.584 399 247 7 87 481 1 385 8.25e-61 205
MS.gene74246.t1 MTR_7g113960 32.816 451 271 12 36 481 32 455 3.24e-60 206
MS.gene74246.t1 MTR_2g020710 34.634 410 238 9 80 481 4 391 3.80e-60 203
MS.gene74246.t1 MTR_8g077300 31.602 462 279 9 32 481 38 474 4.75e-60 205
MS.gene74246.t1 MTR_2g020710 34.634 410 238 9 80 481 93 480 1.28e-59 204
MS.gene74246.t1 MTR_4g013205 31.011 445 290 6 39 482 42 470 1.00e-58 202
MS.gene74246.t1 MTR_7g113970 33.902 410 242 9 80 482 106 493 5.03e-58 200
MS.gene74246.t1 MTR_6g087910 30.172 464 298 9 21 482 45 484 2.16e-57 198
MS.gene74246.t1 MTR_5g020270 32.080 452 263 11 39 485 56 468 9.30e-57 196
MS.gene74246.t1 MTR_5g006070 28.958 480 310 11 31 487 20 491 6.41e-56 195
MS.gene74246.t1 MTR_7g094110 33.831 402 241 8 85 481 91 472 1.43e-54 191
MS.gene74246.t1 MTR_1g038600 28.145 469 308 8 31 487 21 472 6.76e-52 184
MS.gene74246.t1 MTR_1g038630 27.615 478 317 8 31 487 21 490 1.09e-51 184
MS.gene74246.t1 MTR_4g091370 28.601 479 313 10 31 487 21 492 1.48e-51 183
MS.gene74246.t1 MTR_1g104770 28.753 473 304 12 39 487 29 492 1.82e-51 183
MS.gene74246.t1 MTR_5g006070 31.122 392 257 9 101 487 60 443 4.44e-51 181
MS.gene74246.t1 MTR_0009s0370 28.092 477 310 11 39 490 27 495 6.96e-51 181
MS.gene74246.t1 MTR_5g041550 26.233 507 339 11 6 489 1 495 7.84e-51 181
MS.gene74246.t1 MTR_1g104780 30.099 505 301 16 39 504 28 519 1.49e-50 181
MS.gene74246.t1 MTR_5g082540 27.731 476 319 7 31 487 21 490 3.77e-50 179
MS.gene74246.t1 MTR_4g118610 33.592 387 229 10 39 419 58 422 4.22e-50 177
MS.gene74246.t1 MTR_1g104750 28.800 500 316 15 13 487 7 491 4.53e-50 179
MS.gene74246.t1 MTR_3g023480 26.327 490 331 9 37 503 25 507 9.24e-50 178
MS.gene74246.t1 MTR_4g090600 28.169 497 326 10 30 503 20 508 1.41e-49 178
MS.gene74246.t1 MTR_4g064820 35.277 343 199 6 42 364 105 444 1.74e-49 177
MS.gene74246.t1 MTR_5g019870 28.916 498 319 9 30 507 12 494 4.26e-49 176
MS.gene74246.t1 MTR_6g087040 29.592 490 314 12 32 500 25 504 4.49e-49 176
MS.gene74246.t1 MTR_6g088375 29.592 490 314 12 32 500 25 504 4.49e-49 176
MS.gene74246.t1 MTR_0204s0020 26.866 469 310 9 39 487 27 482 2.57e-48 174
MS.gene74246.t1 MTR_0204s0020 27.484 473 305 11 39 487 27 485 5.00e-48 173
MS.gene74246.t1 MTR_3g093010 25.662 491 333 9 36 502 25 507 1.68e-47 172
MS.gene74246.t1 MTR_2g020710 34.195 348 197 9 80 419 93 416 3.85e-47 169
MS.gene74246.t1 MTR_5g094760 28.008 482 309 12 30 487 24 491 8.38e-47 170
MS.gene74246.t1 MTR_2g020710 34.218 339 194 8 80 410 93 410 1.00e-46 168
MS.gene74246.t1 MTR_0204s0040 27.559 508 320 13 9 487 5 493 1.28e-46 170
MS.gene74246.t1 MTR_3g008160 27.027 481 318 12 30 487 20 490 1.38e-46 170
MS.gene74246.t1 MTR_3g008170 26.547 501 320 13 32 501 22 505 4.74e-46 168
MS.gene74246.t1 MTR_4g116770 28.452 478 294 13 39 487 231 689 1.42e-45 170
MS.gene74246.t1 MTR_8g102860 27.745 501 320 12 18 494 16 498 1.96e-45 167
MS.gene74246.t1 MTR_3g007910 27.371 464 295 11 39 489 28 462 1.09e-44 164
MS.gene74246.t1 MTR_3g074270 27.079 469 299 11 39 489 29 472 1.56e-44 164
MS.gene74246.t1 MTR_7g091690 28.041 485 301 14 32 487 26 491 1.23e-43 161
MS.gene74246.t1 MTR_4g116790 26.819 481 322 10 39 499 33 503 4.59e-43 160
MS.gene74246.t1 MTR_3g008160 27.896 423 290 10 70 487 29 441 5.00e-43 159
MS.gene74246.t1 MTR_3g074390 26.439 469 321 8 39 489 34 496 9.64e-43 159
MS.gene74246.t1 MTR_8g077310 32.143 364 223 9 39 397 53 397 1.09e-42 157
MS.gene74246.t1 MTR_3g093060 24.757 412 298 7 85 491 45 449 6.11e-42 156
MS.gene74246.t1 MTR_7g094110 31.095 402 232 9 85 481 91 452 8.83e-42 155
MS.gene74246.t1 MTR_8g102860 28.434 415 279 8 86 494 44 446 1.08e-41 155
MS.gene74246.t1 MTR_3g074410 26.737 475 309 13 39 487 31 492 1.88e-41 155
MS.gene74246.t1 MTR_7g113960 31.751 337 205 10 36 367 32 348 2.39e-39 147
MS.gene74246.t1 MTR_2g020710 33.562 292 181 6 80 369 93 373 9.56e-39 145
MS.gene74246.t1 MTR_4g069500 29.326 341 205 9 195 509 2 332 1.30e-38 144
MS.gene74246.t1 MTR_7g113970 33.446 296 173 7 80 368 106 384 1.41e-37 143
MS.gene74246.t1 MTR_3g116060 37.850 214 124 4 36 247 7 213 4.67e-35 139
MS.gene74246.t1 MTR_3g116060 31.776 214 130 3 274 478 505 711 6.47e-24 106
MS.gene74246.t1 MTR_3g118530 37.619 210 126 4 43 249 14 221 3.07e-33 134
MS.gene74246.t1 MTR_3g118530 32.127 221 133 4 267 478 509 721 1.54e-24 108
MS.gene74246.t1 MTR_3g118530 37.619 210 126 4 43 249 14 221 4.60e-33 133
MS.gene74246.t1 MTR_5g024740 35.071 211 131 4 36 244 7 213 1.32e-31 129
MS.gene74246.t1 MTR_5g024740 30.698 215 131 4 274 478 497 703 4.73e-18 87.8
MS.gene74246.t1 MTR_5g044910 33.610 241 156 4 36 274 7 245 1.19e-30 126
MS.gene74246.t1 MTR_5g044910 28.384 229 148 3 274 493 495 716 3.28e-16 82.0
MS.gene74246.t1 MTR_4g116790 27.190 331 206 9 39 345 33 352 1.98e-29 119
MS.gene74246.t1 MTR_3g074340 26.524 328 228 8 181 503 20 339 1.02e-25 108
MS.gene74246.t1 MTR_8g073100 31.050 219 148 3 33 249 4 221 1.56e-25 111
MS.gene74246.t1 MTR_8g073100 29.767 215 133 4 274 478 493 699 1.87e-17 85.9
MS.gene74246.t1 MTR_3g074380 25.806 341 229 7 39 361 32 366 1.71e-25 108
MS.gene74246.t1 MTR_3g074320 26.220 328 229 8 181 503 20 339 1.57e-24 104
MS.gene74246.t1 MTR_3g074370 26.220 328 229 8 181 503 20 339 2.20e-24 104
MS.gene74246.t1 MTR_6g006260 39.474 152 81 3 203 352 15 157 1.56e-23 99.8
MS.gene74246.t1 MTR_6g006260 43.200 125 62 2 228 352 43 158 1.78e-22 97.4
MS.gene74246.t1 MTR_6g006260 48.515 101 48 1 252 352 5 101 1.84e-22 95.5
MS.gene74246.t1 MTR_1g074940 23.077 494 299 17 39 474 27 497 2.96e-17 85.1
MS.gene74246.t1 MTR_3g465780 50.000 102 22 4 50 148 5 80 3.46e-17 79.3
MS.gene74246.t1 MTR_3g074400 23.025 443 273 12 62 478 20 420 1.50e-16 82.4
MS.gene74246.t1 MTR_1g069935 22.941 510 300 21 39 480 27 511 1.47e-15 79.7
MS.gene74246.t1 MTR_5g068140 23.004 526 333 23 39 502 26 541 3.75e-15 78.6
MS.gene74246.t1 MTR_1g069930 23.197 513 300 21 38 481 26 513 4.33e-15 78.2
MS.gene74246.t1 MTR_1g074930 23.191 470 275 19 74 480 68 514 5.18e-14 74.7
MS.gene74246.t1 MTR_1g043200 21.542 506 318 18 39 481 26 515 8.14e-13 71.2
MS.gene74246.t1 MTR_5g096000 29.221 154 93 3 39 185 28 172 8.59e-13 69.7
MS.gene74246.t1 MTR_3g082700 23.144 458 263 18 81 474 76 508 1.07e-12 70.9
MS.gene74246.t1 MTR_1g043220 21.584 505 317 18 39 480 26 514 2.55e-12 69.7
MS.gene74246.t1 MTR_7g096880 23.026 456 261 18 81 474 76 503 2.85e-12 69.3
MS.gene74246.t1 MTR_4g005090 31.053 190 126 4 75 262 67 253 3.13e-12 69.3
MS.gene74246.t1 MTR_7g096870 21.957 460 275 16 81 480 76 511 4.17e-12 68.9
MS.gene74246.t1 MTR_1g043290 21.584 505 317 17 39 480 26 514 6.04e-12 68.2
MS.gene74246.t1 MTR_4g083960 20.800 500 319 18 39 481 26 505 1.28e-11 67.4
MS.gene74246.t1 MTR_7g094420 31.169 154 77 5 285 438 1 125 2.15e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene74246.t1 AT2G43330 71.968 503 137 2 4 505 2 501 0.0 709
MS.gene74246.t1 AT1G30220 57.183 355 149 1 28 379 23 377 2.02e-125 378
MS.gene74246.t1 AT1G30220 62.963 108 40 0 381 488 453 560 7.57e-38 147
MS.gene74246.t1 AT2G35740 52.738 347 158 2 31 371 24 370 3.76e-121 367
MS.gene74246.t1 AT2G35740 54.455 101 46 0 381 481 456 556 1.78e-27 116
MS.gene74246.t1 AT4G16480 53.602 347 155 2 28 368 22 368 1.71e-116 355
MS.gene74246.t1 AT4G16480 57.426 101 43 0 381 481 457 557 1.33e-28 120
MS.gene74246.t1 AT4G16480 53.602 347 155 2 28 368 22 368 1.71e-116 355
MS.gene74246.t1 AT4G16480 57.426 101 43 0 381 481 457 557 1.33e-28 120
MS.gene74246.t1 AT4G16480 53.602 347 155 2 28 368 22 368 1.71e-116 355
MS.gene74246.t1 AT4G16480 57.426 101 43 0 381 481 457 557 1.33e-28 120
MS.gene74246.t1 AT5G16150 39.111 450 260 5 33 482 105 540 9.46e-85 272
MS.gene74246.t1 AT5G16150 39.111 450 260 5 33 482 105 540 9.46e-85 272
MS.gene74246.t1 AT5G16150 39.111 450 260 5 33 482 105 540 9.46e-85 272
MS.gene74246.t1 AT2G20780 34.316 475 293 6 30 496 52 515 2.57e-76 249
MS.gene74246.t1 AT4G36670 32.427 478 292 8 30 486 14 481 5.43e-74 243
MS.gene74246.t1 AT2G18480 35.456 471 276 10 30 481 19 480 1.95e-72 239
MS.gene74246.t1 AT3G18830 32.231 484 293 10 29 489 32 503 2.09e-71 237
MS.gene74246.t1 AT5G17010 32.863 496 289 9 13 481 21 499 1.10e-70 234
MS.gene74246.t1 AT5G17010 32.863 496 289 9 13 481 21 499 1.10e-70 234
MS.gene74246.t1 AT5G17010 32.863 496 289 9 13 481 21 499 1.10e-70 234
MS.gene74246.t1 AT2G16120 31.737 501 297 9 29 502 22 504 1.99e-70 234
MS.gene74246.t1 AT5G59250 33.913 460 271 6 42 481 107 553 3.53e-69 231
MS.gene74246.t1 AT2G16130 31.325 498 301 8 29 501 22 503 1.05e-68 229
MS.gene74246.t1 AT2G20780 34.004 447 275 6 58 496 23 457 3.25e-67 224
MS.gene74246.t1 AT1G05030 32.449 490 307 8 4 487 49 520 1.57e-66 224
MS.gene74246.t1 AT3G03090 32.675 456 279 6 42 481 56 499 3.78e-66 222
MS.gene74246.t1 AT1G75220 33.478 460 279 11 33 485 48 487 2.91e-64 217
MS.gene74246.t1 AT2G48020 33.405 464 272 12 30 483 24 460 1.32e-62 212
MS.gene74246.t1 AT2G48020 33.405 464 272 12 30 483 24 460 1.32e-62 212
MS.gene74246.t1 AT1G05030 33.971 418 262 5 71 487 64 468 2.01e-61 209
MS.gene74246.t1 AT1G19450 33.260 457 284 9 33 485 49 488 2.03e-61 209
MS.gene74246.t1 AT5G27360 32.812 448 273 9 39 481 41 465 1.02e-60 207
MS.gene74246.t1 AT5G27360 32.812 448 273 9 39 481 89 513 3.19e-60 207
MS.gene74246.t1 AT5G27350 31.983 469 281 10 39 502 37 472 1.98e-57 198
MS.gene74246.t1 AT1G50310 28.631 482 310 11 32 489 24 495 5.36e-57 198
MS.gene74246.t1 AT1G79820 30.684 453 293 7 31 482 56 488 1.07e-55 194
MS.gene74246.t1 AT1G79820 30.684 453 293 7 31 482 56 488 1.07e-55 194
MS.gene74246.t1 AT3G05150 35.049 408 229 10 85 481 84 466 7.22e-55 191
MS.gene74246.t1 AT3G05150 35.049 408 229 10 85 481 84 466 7.22e-55 191
MS.gene74246.t1 AT5G18840 33.251 406 249 8 80 481 88 475 9.04e-55 191
MS.gene74246.t1 AT5G27360 33.333 378 229 7 108 481 3 361 9.27e-55 188
MS.gene74246.t1 AT5G27360 33.333 378 229 7 108 481 3 361 9.27e-55 188
MS.gene74246.t1 AT5G26340 29.541 501 310 15 30 501 20 506 9.82e-55 192
MS.gene74246.t1 AT3G05150 35.049 408 229 10 85 481 84 466 1.15e-54 191
MS.gene74246.t1 AT3G19940 28.512 477 312 9 32 487 24 492 1.33e-54 192
MS.gene74246.t1 AT1G07340 29.607 483 288 11 37 487 27 489 2.09e-54 191
MS.gene74246.t1 AT5G26250 29.079 478 302 12 32 485 21 485 2.50e-54 191
MS.gene74246.t1 AT1G11260 27.470 506 333 12 30 510 20 516 3.86e-53 188
MS.gene74246.t1 AT1G54730 32.108 408 250 10 80 481 76 462 4.16e-53 186
MS.gene74246.t1 AT3G05155 30.068 439 279 10 47 481 41 455 5.51e-53 186
MS.gene74246.t1 AT3G05165 31.336 434 258 11 65 481 50 460 3.48e-52 184
MS.gene74246.t1 AT3G05165 31.336 434 258 11 65 481 50 460 3.48e-52 184
MS.gene74246.t1 AT3G05165 31.336 434 258 11 65 481 50 460 3.48e-52 184
MS.gene74246.t1 AT3G05400 30.147 408 260 9 80 482 70 457 7.36e-52 183
MS.gene74246.t1 AT1G08930 30.752 452 277 12 39 481 64 488 1.76e-51 183
MS.gene74246.t1 AT1G08930 30.752 452 277 12 39 481 64 488 1.76e-51 183
MS.gene74246.t1 AT3G05960 27.745 501 323 12 32 507 20 506 2.99e-51 182
MS.gene74246.t1 AT4G21480 28.542 480 308 10 32 487 22 490 3.44e-50 179
MS.gene74246.t1 AT5G23270 29.184 490 312 12 32 496 23 502 9.32e-50 179
MS.gene74246.t1 AT4G04750 28.942 463 290 10 30 481 34 468 1.67e-49 177
MS.gene74246.t1 AT4G04750 28.942 463 290 10 30 481 34 468 1.67e-49 177
MS.gene74246.t1 AT3G05160 30.324 432 269 8 63 481 39 451 1.79e-49 176
MS.gene74246.t1 AT4G04750 28.942 463 290 10 30 481 78 512 4.80e-49 177
MS.gene74246.t1 AT3G05160 30.923 401 254 7 85 481 21 402 5.45e-49 174
MS.gene74246.t1 AT3G05160 30.923 401 254 7 85 481 21 402 5.45e-49 174
MS.gene74246.t1 AT1G67300 29.476 458 295 8 31 482 53 488 7.24e-49 176
MS.gene74246.t1 AT1G54730 30.882 408 234 12 80 481 76 441 1.01e-48 174
MS.gene74246.t1 AT1G67300 29.258 458 295 8 31 482 53 487 1.20e-48 175
MS.gene74246.t1 AT1G67300 29.258 458 295 8 31 482 53 487 1.20e-48 175
MS.gene74246.t1 AT1G77210 28.889 495 309 16 18 487 16 492 2.89e-48 174
MS.gene74246.t1 AT1G77210 28.889 495 309 16 18 487 16 492 2.89e-48 174
MS.gene74246.t1 AT4G04760 29.512 410 271 7 80 486 16 410 2.36e-47 170
MS.gene74246.t1 AT4G04760 29.512 410 271 7 80 486 75 469 6.20e-47 170
MS.gene74246.t1 AT1G54730 31.781 365 223 9 80 438 76 420 6.63e-47 169
MS.gene74246.t1 AT1G79820 29.925 401 260 7 31 430 56 436 1.15e-46 169
MS.gene74246.t1 AT3G19930 25.832 511 345 9 7 498 6 501 1.14e-45 167
MS.gene74246.t1 AT3G19930 25.832 511 345 9 7 498 6 501 1.14e-45 167
MS.gene74246.t1 AT3G05400 30.709 381 232 10 114 482 77 437 1.76e-45 165
MS.gene74246.t1 AT1G34580 28.361 476 306 10 39 489 30 495 3.36e-45 166
MS.gene74246.t1 AT5G27360 31.000 400 240 9 39 433 41 409 1.25e-44 163
MS.gene74246.t1 AT4G02050 27.893 484 303 13 32 487 26 491 1.82e-44 164
MS.gene74246.t1 AT4G02050 27.893 484 303 13 32 487 26 491 1.82e-44 164
MS.gene74246.t1 AT4G04760 29.268 410 269 7 80 486 75 466 1.87e-44 163
MS.gene74246.t1 AT1G08890 29.821 446 272 12 54 481 35 457 9.31e-44 161
MS.gene74246.t1 AT3G05165 30.750 400 238 10 70 452 55 432 2.11e-43 161
MS.gene74246.t1 AT1G34580 28.046 435 297 8 62 489 20 445 5.96e-43 159
MS.gene74246.t1 AT1G54730 30.556 360 203 11 85 438 81 399 1.58e-42 157
MS.gene74246.t1 AT1G67300 28.873 426 269 10 21 440 46 443 1.75e-42 157
MS.gene74246.t1 AT1G67300 28.873 426 269 10 21 440 46 443 1.75e-42 157
MS.gene74246.t1 AT3G05165 30.311 386 230 10 70 438 55 418 2.15e-42 157
MS.gene74246.t1 AT3G05165 30.311 386 230 10 70 438 55 418 2.15e-42 157
MS.gene74246.t1 AT5G17010 28.486 502 243 13 13 481 18 436 2.85e-42 156
MS.gene74246.t1 AT3G20460 29.167 408 252 8 85 481 102 483 3.50e-42 157
MS.gene74246.t1 AT1G08920 29.561 433 267 9 65 481 52 462 3.64e-42 157
MS.gene74246.t1 AT1G67300 28.856 402 254 9 21 416 46 421 3.06e-41 153
MS.gene74246.t1 AT1G67300 28.856 402 254 9 21 416 46 421 3.06e-41 153
MS.gene74246.t1 AT1G08900 28.412 447 279 11 53 481 32 455 5.00e-40 150
MS.gene74246.t1 AT1G08900 28.412 447 279 11 53 481 32 455 5.00e-40 150
MS.gene74246.t1 AT1G08900 28.506 435 271 10 64 481 2 413 7.49e-40 149
MS.gene74246.t1 AT1G08920 29.091 440 267 10 65 481 52 469 1.01e-39 150
MS.gene74246.t1 AT1G54730 31.157 337 206 9 80 410 76 392 1.91e-39 148
MS.gene74246.t1 AT1G54730 31.157 337 206 9 80 410 76 392 1.91e-39 148
MS.gene74246.t1 AT1G08900 29.024 410 260 9 80 481 61 447 3.79e-39 148
MS.gene74246.t1 AT1G50310 27.299 348 238 8 146 487 12 350 6.17e-39 146
MS.gene74246.t1 AT1G79820 28.035 453 257 7 31 482 56 440 4.30e-38 145
MS.gene74246.t1 AT2G48020 31.014 345 206 10 30 364 24 346 3.13e-37 141
MS.gene74246.t1 AT5G61520 26.305 498 322 13 32 499 23 505 4.06e-37 144
MS.gene74246.t1 AT2G48020 31.402 328 193 10 30 347 24 329 5.04e-36 137
MS.gene74246.t1 AT3G51490 36.406 217 133 4 36 249 7 221 9.95e-36 142
MS.gene74246.t1 AT3G51490 32.075 212 134 3 269 478 503 706 1.33e-22 102
MS.gene74246.t1 AT3G51490 36.406 217 133 4 36 249 7 221 1.00e-35 142
MS.gene74246.t1 AT3G51490 32.420 219 132 3 269 478 503 714 7.69e-25 108
MS.gene74246.t1 AT1G54730 29.819 332 186 11 85 410 81 371 2.47e-35 136
MS.gene74246.t1 AT1G08920 28.941 387 238 8 65 435 52 417 8.16e-35 136
MS.gene74246.t1 AT5G61520 27.064 436 296 11 71 499 37 457 8.05e-34 133
MS.gene74246.t1 AT1G20840 34.348 230 144 4 36 262 7 232 3.28e-33 134
MS.gene74246.t1 AT1G20840 31.776 214 130 2 274 478 507 713 8.14e-22 99.8
MS.gene74246.t1 AT1G20840 34.348 230 144 4 36 262 7 232 3.28e-33 134
MS.gene74246.t1 AT1G20840 31.776 214 130 2 274 478 507 713 8.14e-22 99.8
MS.gene74246.t1 AT1G08900 28.218 404 250 10 53 438 32 413 9.14e-33 130
MS.gene74246.t1 AT3G05155 29.508 305 191 8 47 347 41 325 5.07e-32 125
MS.gene74246.t1 AT1G77210 28.818 347 228 11 148 487 9 343 1.61e-31 125
MS.gene74246.t1 AT1G54730 31.022 274 167 8 80 347 76 333 9.70e-30 119
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.24e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 514 720 1.03e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.37e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 504 710 1.06e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.37e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 504 710 1.06e-23 105
MS.gene74246.t1 AT4G35300 36.667 210 128 4 43 249 14 221 2.37e-29 122
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 504 710 1.06e-23 105
MS.gene74246.t1 AT1G54730 31.381 239 146 7 80 312 76 302 3.07e-27 112
MS.gene74246.t1 AT1G54730 31.381 239 146 7 80 312 76 302 3.07e-27 112
MS.gene74246.t1 AT3G51490 35.465 172 107 3 81 249 1 171 4.38e-26 112
MS.gene74246.t1 AT3G51490 32.420 219 132 3 269 478 453 664 8.73e-25 108
MS.gene74246.t1 AT4G35300 30.698 215 131 4 274 478 317 523 5.96e-24 105
MS.gene74246.t1 AT5G43340 23.767 446 275 15 81 481 77 502 6.75e-18 87.0
MS.gene74246.t1 AT2G32830 24.157 534 298 21 39 495 27 530 1.46e-15 79.7
MS.gene74246.t1 AT3G54700 23.288 511 296 20 39 480 27 510 2.00e-15 79.3
MS.gene74246.t1 AT3G54700 23.288 511 296 20 39 480 27 510 2.00e-15 79.3
MS.gene74246.t1 AT1G79820 33.766 154 95 1 329 482 232 378 1.74e-14 75.5
MS.gene74246.t1 AT1G79820 28.070 171 116 3 129 293 87 256 1.64e-12 69.7
MS.gene74246.t1 AT2G38940 22.330 515 300 21 39 480 27 514 1.04e-13 73.9
MS.gene74246.t1 AT1G76430 21.627 504 317 16 39 481 25 511 5.68e-13 71.6
MS.gene74246.t1 AT5G43350 21.739 506 313 19 39 480 27 513 9.16e-12 67.8
MS.gene74246.t1 AT3G13050 28.315 279 187 6 58 332 44 313 5.06e-11 65.5
MS.gene74246.t1 AT3G13050 28.315 279 187 6 58 332 44 313 5.06e-11 65.5
MS.gene74246.t1 AT3G13050 28.315 279 187 6 58 332 44 313 5.06e-11 65.5
MS.gene74246.t1 AT3G13050 28.315 279 187 6 58 332 44 313 5.06e-11 65.5

Find 125 sgRNAs with CRISPR-Local

Find 151 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACTGGATGGCTTGCAGTTT+TGG 0.155738 1.1:-82166348 MS.gene74246:CDS
CTTTCCATTGCTGAAGCTTT+AGG 0.162742 1.1:-82166170 MS.gene74246:CDS
CCCAGGTAGCTCAGGGTATT+TGG 0.168005 1.1:-82167676 MS.gene74246:CDS
GCAGATGTCATCTTCATTAT+TGG 0.174490 1.1:-82167160 MS.gene74246:CDS
CAAATTCCTCTATATTCTTT+AGG 0.213701 1.1:+82166251 None:intergenic
TTGAAGAGGTTGAACTAATA+TGG 0.216314 1.1:-82166055 MS.gene74246:CDS
AGGAGGAGTGTTTACATCTT+TGG 0.252466 1.1:-82166435 MS.gene74246:CDS
AAAAGCCATCTAGGTGATTC+AGG 0.259414 1.1:+82166845 None:intergenic
TTTCCATTGCTGAAGCTTTA+GGG 0.266602 1.1:-82166169 MS.gene74246:CDS
GGACGCCTTCTTGTTGGTTT+AGG 0.288105 1.1:-82167091 MS.gene74246:CDS
TCTGACTCGCGAAACCTTCT+TGG 0.304088 1.1:-82165993 MS.gene74246:CDS
ATCTTCATTATTGGAGCAAT+TGG 0.305046 1.1:-82167151 MS.gene74246:CDS
ATGGTGTTCCAACAGTTTAC+TGG 0.313840 1.1:-82166632 MS.gene74246:CDS
TTTAAGAATCCTTATATTCT+CGG 0.321169 1.1:-82167624 MS.gene74246:CDS
CTCGCTGCTGTCGCTGGTAT+TGG 0.357359 1.1:-82167600 MS.gene74246:CDS
ATAAAGAAGCACAAACAAAA+AGG 0.363326 1.1:+82166103 None:intergenic
GCAGCGAGACCGAGAATATA+AGG 0.369665 1.1:+82167615 None:intergenic
TCCTCCCTGAATCACCTAGA+TGG 0.374803 1.1:-82166850 MS.gene74246:CDS
AGAAATCAGACTAGCATTCA+TGG 0.377045 1.1:-82166669 MS.gene74246:CDS
GACTAATGAACCTCTGATTT+CGG 0.379135 1.1:+82167015 None:intergenic
GTTTGTGCTTCTTTATGTTC+CGG 0.382218 1.1:-82166096 MS.gene74246:CDS
ATATTAGCTCTTTGTAGCTT+AGG 0.384901 1.1:-82166455 MS.gene74246:CDS
TTACGCGTGTCCCTGGTACT+TGG 0.405259 1.1:-82166931 MS.gene74246:CDS
CACGGCACCGGTCCCATCCC+GGG 0.408219 1.1:+82166296 None:intergenic
AATGCTGTCGGAACTGTTCT+TGG 0.410771 1.1:-82166509 MS.gene74246:CDS
CCACGGCACCGGTCCCATCC+CGG 0.414970 1.1:+82166295 None:intergenic
TCCAAATACCCTGAGCTACC+TGG 0.415613 1.1:+82167675 None:intergenic
CAATCTACCCCAGGTAGCTC+AGG 0.419324 1.1:-82167684 MS.gene74246:CDS
CTTCTTGTTGGTTTAGGTGT+CGG 0.422396 1.1:-82167085 MS.gene74246:CDS
CTTTATGTTCCGGAGACTAA+AGG 0.423728 1.1:-82166086 MS.gene74246:CDS
CCAACCATTGTTCAAATGGC+TGG 0.426739 1.1:-82166584 MS.gene74246:CDS
GGTACTTGGCGTTGGATGTT+GGG 0.427778 1.1:-82166917 MS.gene74246:CDS
ATAATCGGACGCCTTCTTGT+TGG 0.435228 1.1:-82167097 MS.gene74246:CDS
CATGGTTGGAGCAGGATTGA+TGG 0.435314 1.1:-82166651 MS.gene74246:CDS
GATCCTTACATTCTCATAAT+CGG 0.437163 1.1:-82167112 MS.gene74246:CDS
TGAGATGACCAATACTACTA+TGG 0.438616 1.1:-82167709 None:intergenic
CTCGGTCTCGCTGCTGTCGC+TGG 0.438703 1.1:-82167606 MS.gene74246:CDS
CAGTCCAACCATTGTTCAAA+TGG 0.439282 1.1:-82166588 MS.gene74246:CDS
CCGGGATGGGACCGGTGCCG+TGG 0.444050 1.1:-82166295 MS.gene74246:CDS
CTGACTCGCGAAACCTTCTT+GGG 0.446823 1.1:-82165992 MS.gene74246:CDS
TTGCATGCAGGTGTGATATC+AGG 0.457665 1.1:-82167340 MS.gene74246:intron
TGTCTGAGACACAATGAGAT+TGG 0.458085 1.1:+82166196 None:intergenic
TGGTACTTGGCGTTGGATGT+TGG 0.458349 1.1:-82166918 MS.gene74246:CDS
GCAATAGCTGGTGCAATAGT+TGG 0.459155 1.1:-82167241 MS.gene74246:CDS
CGTCCGATTATGAGAATGTA+AGG 0.459282 1.1:+82167109 None:intergenic
GTCAGAGTTGTTGTTAATGT+TGG 0.461967 1.1:+82166010 None:intergenic
TATGTCAGCTACTGTGTGTT+GGG 0.465114 1.1:-82166222 MS.gene74246:CDS
TAATATGGAAAGAGAGAGCT+TGG 0.467876 1.1:-82166040 MS.gene74246:CDS
GAGTTCATTGCCCACGGCAC+CGG 0.468452 1.1:+82166284 None:intergenic
GCAATAGTTGGAGCAGCAAC+AGG 0.468489 1.1:-82167229 MS.gene74246:CDS
ATTGCTGAAGCTTTAGGGAC+TGG 0.468861 1.1:-82166164 MS.gene74246:CDS
CTCGCCTTTACGCGTGTCCC+TGG 0.469426 1.1:-82166938 MS.gene74246:CDS
AACATCCAACGCCAAGTACC+AGG 0.473948 1.1:+82166920 None:intergenic
AAAGAATATAGAGGAATTTG+TGG 0.476125 1.1:-82166248 MS.gene74246:CDS
GATTTCGGAAGGTGATGCTT+CGG 0.484240 1.1:+82167030 None:intergenic
GTATGTCAGCTACTGTGTGT+TGG 0.484682 1.1:-82166223 MS.gene74246:CDS
CTAGCATTCATGGTTGGAGC+AGG 0.485561 1.1:-82166659 MS.gene74246:CDS
ATTATGAGAATGTAAGGATC+AGG 0.486112 1.1:+82167115 None:intergenic
CCAAATACCCTGAGCTACCT+GGG 0.488927 1.1:+82167676 None:intergenic
CGGGATGGGACCGGTGCCGT+GGG 0.490056 1.1:-82166294 MS.gene74246:CDS
CATTATTGGAGCAATTGGTA+TGG 0.496139 1.1:-82167146 MS.gene74246:CDS
AGAATGAATTGAACAAGTGC+AGG 0.497138 1.1:+82166881 None:intergenic
CATTTCCAACATCTATGACT+TGG 0.497219 1.1:-82166789 MS.gene74246:CDS
ATCTTTGGTTCTCTTGTCTG+TGG 0.500034 1.1:-82166420 MS.gene74246:CDS
AAGGTCAATCCTTTAGTCTC+CGG 0.503552 1.1:+82166077 None:intergenic
GCATCAGGATCAAATACTAC+TGG 0.508025 1.1:-82166365 MS.gene74246:CDS
CCAGCCATTTGAACAATGGT+TGG 0.509483 1.1:+82166584 None:intergenic
TGGATTTCAATCTAATGAGT+TGG 0.514048 1.1:-82166564 MS.gene74246:CDS
TGATGCTTACGGACGAAAGA+AGG 0.514170 1.1:-82167194 MS.gene74246:CDS
GGTTGGATTAATGATGCTTA+CGG 0.515955 1.1:-82167205 MS.gene74246:CDS
TTAGCTCTTTGTAGCTTAGG+AGG 0.517120 1.1:-82166452 MS.gene74246:CDS
ATTTACCTCATTGATCATGC+AGG 0.519303 1.1:-82166485 MS.gene74246:CDS
GTAGGAAAGGAGTTGTCCAC+TGG 0.527919 1.1:+82166970 None:intergenic
AAAGGCGAGGTTAACTATGT+AGG 0.528535 1.1:+82166952 None:intergenic
ATAGTCAGCATGGCAATAGC+TGG 0.528818 1.1:-82167253 MS.gene74246:CDS
TGATGCTTCGGCAATGTAGA+CGG 0.530489 1.1:+82167042 None:intergenic
TAGAGAAAGTAACATTCTGC+AGG 0.532653 1.1:-82167281 MS.gene74246:CDS
GATCAATGTTCGTCCCAAGA+AGG 0.533647 1.1:+82165979 None:intergenic
TTGGAGCAGCAACAGGTGGT+TGG 0.534544 1.1:-82167222 MS.gene74246:CDS
TATTAGTTCAACCTCTTCAA+AGG 0.536400 1.1:+82166058 None:intergenic
AAAGCCATCTAGGTGATTCA+GGG 0.537542 1.1:+82166846 None:intergenic
GCTGCTGTCGCTGGTATTGG+TGG 0.540291 1.1:-82167597 MS.gene74246:CDS
AGATTGTACCATAGTAGTAT+TGG 0.543800 1.1:+82167701 None:intergenic
AATATGGAAAGAGAGAGCTT+GGG 0.544570 1.1:-82166039 MS.gene74246:CDS
GATGCTTCGGCAATGTAGAC+GGG 0.544695 1.1:+82167043 None:intergenic
ACGAGCCAAGTCATAGATGT+TGG 0.547587 1.1:+82166784 None:intergenic
ACGGCACCGGTCCCATCCCG+GGG 0.549708 1.1:+82166297 None:intergenic
AAATCCAGCCATTTGAACAA+TGG 0.550810 1.1:+82166580 None:intergenic
ACAGCAAGAATCAAGAAAGT+AGG 0.550957 1.1:+82166140 None:intergenic
ATATATCCTAAAGAATATAG+AGG 0.551417 1.1:-82166257 MS.gene74246:CDS
ATCTCTGAGTTCATTGCCCA+CGG 0.572690 1.1:+82166278 None:intergenic
ATCAGACTAGCATTCATGGT+TGG 0.577728 1.1:-82166665 MS.gene74246:CDS
TAAAGGATTGACCTTTGAAG+AGG 0.583202 1.1:-82166069 MS.gene74246:CDS
CGAGGTTAACTATGTAGGAA+AGG 0.590030 1.1:+82166957 None:intergenic
AGTACCAGGGACACGCGTAA+AGG 0.594924 1.1:+82166934 None:intergenic
GTTGTCCACTGGTGATCATG+AGG 0.595280 1.1:+82166981 None:intergenic
TTTACCTCATTGATCATGCA+GGG 0.595957 1.1:-82166484 MS.gene74246:CDS
TTCGGCAATGTAGACGGGAG+CGG 0.596993 1.1:+82167048 None:intergenic
TGTTAATGCCAGTAAACTGT+TGG 0.608971 1.1:+82166624 None:intergenic
GTGTCCCTGGTACTTGGCGT+TGG 0.611774 1.1:-82166925 MS.gene74246:CDS
AGTCCCTAAAGCTTCAGCAA+TGG 0.612759 1.1:+82166166 None:intergenic
GCAGGAAACAATAGTCAGCA+TGG 0.613583 1.1:-82167263 MS.gene74246:CDS
GTTGCAGCAATGAATGCTGT+CGG 0.618106 1.1:-82166521 MS.gene74246:CDS
AATGAACCTCTGATTTCGGA+AGG 0.623858 1.1:+82167019 None:intergenic
CAGGATCAAATACTACTGGA+TGG 0.630353 1.1:-82166361 MS.gene74246:CDS
AATCTACCCCAGGTAGCTCA+GGG 0.633868 1.1:-82167683 MS.gene74246:CDS
CGACACCTAAACCAACAAGA+AGG 0.637320 1.1:+82167086 None:intergenic
ATATGGAAAGAGAGAGCTTG+GGG 0.649125 1.1:-82166038 MS.gene74246:CDS
GAATATAGAGGAATTTGTGG+TGG 0.649292 1.1:-82166245 MS.gene74246:CDS
TCCTCCCTGCATGATCAATG+AGG 0.649697 1.1:+82166480 None:intergenic
TTGTCCACTGGTGATCATGA+GGG 0.650445 1.1:+82166982 None:intergenic
GTAGACGGGAGCGGTGACAG+AGG 0.660839 1.1:+82167057 None:intergenic
GAATGAATTGAACAAGTGCA+GGG 0.660884 1.1:+82166882 None:intergenic
GCATCACCTTCCGAAATCAG+AGG 0.664977 1.1:-82167025 MS.gene74246:CDS
ACTATGGTACAATCTACCCC+AGG 0.665561 1.1:-82167693 MS.gene74246:CDS
AATTCCCTCATGATCACCAG+TGG 0.677840 1.1:-82166986 MS.gene74246:CDS
CAGGGACACGCGTAAAGGCG+AGG 0.680053 1.1:+82166939 None:intergenic
ATAGTTGGAGCAGCAACAGG+TGG 0.680933 1.1:-82167226 MS.gene74246:CDS
TGGAAAGAGAGAGCTTGGGG+CGG 0.701863 1.1:-82166035 MS.gene74246:CDS
GCCATCTAGGTGATTCAGGG+AGG 0.705330 1.1:+82166849 None:intergenic
ACCTCATTGATCATGCAGGG+AGG 0.706793 1.1:-82166481 MS.gene74246:CDS
ACATCCAACGCCAAGTACCA+GGG 0.710428 1.1:+82166921 None:intergenic
CAAATACCCTGAGCTACCTG+GGG 0.713648 1.1:+82167677 None:intergenic
GAGAATGTAAGGATCAGGTG+CGG 0.719435 1.1:+82167120 None:intergenic
CGGCACCGGTCCCATCCCGG+GGG 0.744260 1.1:+82166298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATGAATGTCAAATT+TGG - chr1.1:82166969-82166988 MS.gene74246:CDS 15.0%
!! ATATATCCTAAAGAATATAG+AGG - chr1.1:82167422-82167441 MS.gene74246:intron 20.0%
!! ATTAAATAAAAATTGGCACT+TGG - chr1.1:82166312-82166331 MS.gene74246:CDS 20.0%
!! TTTAAGAATCCTTATATTCT+CGG - chr1.1:82166055-82166074 MS.gene74246:CDS 20.0%
!!! CATAAAAGATGATTTTGAAT+CGG - chr1.1:82166374-82166393 MS.gene74246:CDS 20.0%
! AAAGAATATAGAGGAATTTG+TGG - chr1.1:82167431-82167450 MS.gene74246:intron 25.0%
! AGTAATAGTATTTCAGTAGA+TGG + chr1.1:82166209-82166228 None:intergenic 25.0%
! AGTCTTGGAAATAAAATAGT+AGG + chr1.1:82166138-82166157 None:intergenic 25.0%
! CAAATTCCTCTATATTCTTT+AGG + chr1.1:82167431-82167450 None:intergenic 25.0%
!! ATAAAGAAGCACAAACAAAA+AGG + chr1.1:82167579-82167598 None:intergenic 25.0%
AAGTAAATTTGTGTGAGTCT+TGG + chr1.1:82166153-82166172 None:intergenic 30.0%
AGATTGTACCATAGTAGTAT+TGG + chr1.1:82165981-82166000 None:intergenic 30.0%
ATAGTATTTCAGTAGATGGA+TGG + chr1.1:82166205-82166224 None:intergenic 30.0%
ATCTTCATTATTGGAGCAAT+TGG - chr1.1:82166528-82166547 MS.gene74246:CDS 30.0%
ATTATGAGAATGTAAGGATC+AGG + chr1.1:82166567-82166586 None:intergenic 30.0%
GATCCTTACATTCTCATAAT+CGG - chr1.1:82166567-82166586 MS.gene74246:CDS 30.0%
GTATCATATGTTAACTAACG+TGG - chr1.1:82166249-82166268 MS.gene74246:CDS 30.0%
TATTAGTTCAACCTCTTCAA+AGG + chr1.1:82167624-82167643 None:intergenic 30.0%
TGGATTTCAATCTAATGAGT+TGG - chr1.1:82167115-82167134 MS.gene74246:CDS 30.0%
TTCTTCATAAAAAGCCATCT+AGG + chr1.1:82166846-82166865 None:intergenic 30.0%
TTGAAGAGGTTGAACTAATA+TGG - chr1.1:82167624-82167643 MS.gene74246:CDS 30.0%
! AAAAAAGACATTTTGCGTTC+AGG + chr1.1:82166037-82166056 None:intergenic 30.0%
! AAAAAGACATTTTGCGTTCA+GGG + chr1.1:82166036-82166055 None:intergenic 30.0%
! ATATTAGCTCTTTGTAGCTT+AGG - chr1.1:82167224-82167243 MS.gene74246:CDS 30.0%
AAATCCAGCCATTTGAACAA+TGG + chr1.1:82167102-82167121 None:intergenic 35.0%
AATATGGAAAGAGAGAGCTT+GGG - chr1.1:82167640-82167659 MS.gene74246:CDS 35.0%
ACAGCAAGAATCAAGAAAGT+AGG + chr1.1:82167542-82167561 None:intergenic 35.0%
AGAAATCAGACTAGCATTCA+TGG - chr1.1:82167010-82167029 MS.gene74246:CDS 35.0%
AGAATGAATTGAACAAGTGC+AGG + chr1.1:82166801-82166820 None:intergenic 35.0%
ATTTACCTCATTGATCATGC+AGG - chr1.1:82167194-82167213 MS.gene74246:CDS 35.0%
CATTATTGGAGCAATTGGTA+TGG - chr1.1:82166533-82166552 MS.gene74246:CDS 35.0%
CATTTCCAACATCTATGACT+TGG - chr1.1:82166890-82166909 MS.gene74246:CDS 35.0%
GAATATAGAGGAATTTGTGG+TGG - chr1.1:82167434-82167453 MS.gene74246:intron 35.0%
GAATGAATTGAACAAGTGCA+GGG + chr1.1:82166800-82166819 None:intergenic 35.0%
GACTAATGAACCTCTGATTT+CGG + chr1.1:82166667-82166686 None:intergenic 35.0%
GCAGATGTCATCTTCATTAT+TGG - chr1.1:82166519-82166538 MS.gene74246:CDS 35.0%
GGATCAAACATAGAACATGA+TGG + chr1.1:82166184-82166203 None:intergenic 35.0%
GGTTGGATTAATGATGCTTA+CGG - chr1.1:82166474-82166493 MS.gene74246:CDS 35.0%
GTTTGTGCTTCTTTATGTTC+CGG - chr1.1:82167583-82167602 MS.gene74246:CDS 35.0%
TAATATGGAAAGAGAGAGCT+TGG - chr1.1:82167639-82167658 MS.gene74246:CDS 35.0%
TAGAGAAAGTAACATTCTGC+AGG - chr1.1:82166398-82166417 MS.gene74246:CDS 35.0%
TGTTAATGCCAGTAAACTGT+TGG + chr1.1:82167058-82167077 None:intergenic 35.0%
TTTACCTCATTGATCATGCA+GGG - chr1.1:82167195-82167214 MS.gene74246:CDS 35.0%
TTTCCATTGCTGAAGCTTTA+GGG - chr1.1:82167510-82167529 MS.gene74246:intron 35.0%
! GTCAGAGTTGTTGTTAATGT+TGG + chr1.1:82167672-82167691 None:intergenic 35.0%
! TAAAGGATTGACCTTTGAAG+AGG - chr1.1:82167610-82167629 MS.gene74246:CDS 35.0%
!! AGTTGATTTTCTAACAGCTG+AGG - chr1.1:82166929-82166948 MS.gene74246:CDS 35.0%
!!! TATATTGCTTTTTTCTCCCC+CGG - chr1.1:82167365-82167384 MS.gene74246:intron 35.0%
AAAAGCCATCTAGGTGATTC+AGG + chr1.1:82166837-82166856 None:intergenic 40.0%
AAAGCCATCTAGGTGATTCA+GGG + chr1.1:82166836-82166855 None:intergenic 40.0%
AAAGGCGAGGTTAACTATGT+AGG + chr1.1:82166730-82166749 None:intergenic 40.0%
AAGGTCAATCCTTTAGTCTC+CGG + chr1.1:82167605-82167624 None:intergenic 40.0%
AATGAACCTCTGATTTCGGA+AGG + chr1.1:82166663-82166682 None:intergenic 40.0%
ATATGGAAAGAGAGAGCTTG+GGG - chr1.1:82167641-82167660 MS.gene74246:CDS 40.0%
ATCAGACTAGCATTCATGGT+TGG - chr1.1:82167014-82167033 MS.gene74246:CDS 40.0%
ATGGTGTTCCAACAGTTTAC+TGG - chr1.1:82167047-82167066 MS.gene74246:CDS 40.0%
CACAAACAAAAAGGCAAGCA+CGG + chr1.1:82167570-82167589 None:intergenic 40.0%
CAGGATCAAATACTACTGGA+TGG - chr1.1:82167318-82167337 MS.gene74246:CDS 40.0%
CAGTCCAACCATTGTTCAAA+TGG - chr1.1:82167091-82167110 MS.gene74246:CDS 40.0%
CGAGGTTAACTATGTAGGAA+AGG + chr1.1:82166725-82166744 None:intergenic 40.0%
CGTCCGATTATGAGAATGTA+AGG + chr1.1:82166573-82166592 None:intergenic 40.0%
CTTTATGTTCCGGAGACTAA+AGG - chr1.1:82167593-82167612 MS.gene74246:CDS 40.0%
CTTTCCATTGCTGAAGCTTT+AGG - chr1.1:82167509-82167528 MS.gene74246:intron 40.0%
GCATCAGGATCAAATACTAC+TGG - chr1.1:82167314-82167333 MS.gene74246:CDS 40.0%
TATGTCAGCTACTGTGTGTT+GGG - chr1.1:82167457-82167476 MS.gene74246:intron 40.0%
! TGTCTGAGACACAATGAGAT+TGG + chr1.1:82167486-82167505 None:intergenic 40.0%
! TTAGCTCTTTGTAGCTTAGG+AGG - chr1.1:82167227-82167246 MS.gene74246:CDS 40.0%
!! AGGAGGAGTGTTTACATCTT+TGG - chr1.1:82167244-82167263 MS.gene74246:CDS 40.0%
!! ATCTTTGGTTCTCTTGTCTG+TGG - chr1.1:82167259-82167278 MS.gene74246:CDS 40.0%
!! CTTCTTGTTGGTTTAGGTGT+CGG - chr1.1:82166594-82166613 MS.gene74246:CDS 40.0%
!!! ATATTGCTTTTTTCTCCCCC+GGG - chr1.1:82167366-82167385 MS.gene74246:intron 40.0%
AATGCTGTCGGAACTGTTCT+TGG - chr1.1:82167170-82167189 MS.gene74246:CDS 45.0%
AATTCCCTCATGATCACCAG+TGG - chr1.1:82166693-82166712 MS.gene74246:CDS 45.0%
ACGAGCCAAGTCATAGATGT+TGG + chr1.1:82166898-82166917 None:intergenic 45.0%
ACTATGGTACAATCTACCCC+AGG - chr1.1:82165986-82166005 MS.gene74246:CDS 45.0%
AGTCCCTAAAGCTTCAGCAA+TGG + chr1.1:82167516-82167535 None:intergenic 45.0%
ATAATCGGACGCCTTCTTGT+TGG - chr1.1:82166582-82166601 MS.gene74246:CDS 45.0%
ATAGTCAGCATGGCAATAGC+TGG - chr1.1:82166426-82166445 MS.gene74246:CDS 45.0%
ATCTCTGAGTTCATTGCCCA+CGG + chr1.1:82167404-82167423 None:intergenic 45.0%
CCAACCATTGTTCAAATGGC+TGG - chr1.1:82167095-82167114 MS.gene74246:CDS 45.0%
CCAGCCATTTGAACAATGGT+TGG + chr1.1:82167098-82167117 None:intergenic 45.0%
CGACACCTAAACCAACAAGA+AGG + chr1.1:82166596-82166615 None:intergenic 45.0%
GAGAATGTAAGGATCAGGTG+CGG + chr1.1:82166562-82166581 None:intergenic 45.0%
GATCAATGTTCGTCCCAAGA+AGG + chr1.1:82167703-82167722 None:intergenic 45.0%
GATTTCGGAAGGTGATGCTT+CGG + chr1.1:82166652-82166671 None:intergenic 45.0%
GCAATAGCTGGTGCAATAGT+TGG - chr1.1:82166438-82166457 MS.gene74246:CDS 45.0%
GCAGGAAACAATAGTCAGCA+TGG - chr1.1:82166416-82166435 MS.gene74246:CDS 45.0%
GTATGTCAGCTACTGTGTGT+TGG - chr1.1:82167456-82167475 MS.gene74246:intron 45.0%
GTTGCAGCAATGAATGCTGT+CGG - chr1.1:82167158-82167177 MS.gene74246:CDS 45.0%
TGATGCTTACGGACGAAAGA+AGG - chr1.1:82166485-82166504 MS.gene74246:CDS 45.0%
TGATGCTTCGGCAATGTAGA+CGG + chr1.1:82166640-82166659 None:intergenic 45.0%
TTGCATGCAGGTGTGATATC+AGG - chr1.1:82166339-82166358 MS.gene74246:CDS 45.0%
TTGTCCACTGGTGATCATGA+GGG + chr1.1:82166700-82166719 None:intergenic 45.0%
!! ACTGGATGGCTTGCAGTTTT+GGG - chr1.1:82167332-82167351 MS.gene74246:CDS 45.0%
!! ATTGCTGAAGCTTTAGGGAC+TGG - chr1.1:82167515-82167534 MS.gene74246:intron 45.0%
!! TACTGGATGGCTTGCAGTTT+TGG - chr1.1:82167331-82167350 MS.gene74246:CDS 45.0%
!! TTTTGGCTACGACACAGGTA+CGG - chr1.1:82166111-82166130 MS.gene74246:CDS 45.0%
!!! GGTATTGGTGGCTTGCTTTT+TGG - chr1.1:82166094-82166113 MS.gene74246:CDS 45.0%
!!! TTGCTTTTTGGCTACGACAC+AGG - chr1.1:82166106-82166125 MS.gene74246:CDS 45.0%
!! ACTAATAATTAAATAAAAAT+TGG - chr1.1:82166305-82166324 MS.gene74246:CDS 5.0%
AACATCCAACGCCAAGTACC+AGG + chr1.1:82166762-82166781 None:intergenic 50.0%
AATCTACCCCAGGTAGCTCA+GGG - chr1.1:82165996-82166015 MS.gene74246:CDS 50.0%
ACATCCAACGCCAAGTACCA+GGG + chr1.1:82166761-82166780 None:intergenic 50.0%
ACCTCATTGATCATGCAGGG+AGG - chr1.1:82167198-82167217 MS.gene74246:CDS 50.0%
ATAGTTGGAGCAGCAACAGG+TGG - chr1.1:82166453-82166472 MS.gene74246:CDS 50.0%
CAAATACCCTGAGCTACCTG+GGG + chr1.1:82166005-82166024 None:intergenic 50.0%
CATGGTTGGAGCAGGATTGA+TGG - chr1.1:82167028-82167047 MS.gene74246:CDS 50.0%
CCAAATACCCTGAGCTACCT+GGG + chr1.1:82166006-82166025 None:intergenic 50.0%
CTAGCATTCATGGTTGGAGC+AGG - chr1.1:82167020-82167039 MS.gene74246:CDS 50.0%
GATGCTTCGGCAATGTAGAC+GGG + chr1.1:82166639-82166658 None:intergenic 50.0%
GCAATAGTTGGAGCAGCAAC+AGG - chr1.1:82166450-82166469 MS.gene74246:CDS 50.0%
GCAGCGAGACCGAGAATATA+AGG + chr1.1:82166067-82166086 None:intergenic 50.0%
GCATCACCTTCCGAAATCAG+AGG - chr1.1:82166654-82166673 MS.gene74246:CDS 50.0%
GTAGGAAAGGAGTTGTCCAC+TGG + chr1.1:82166712-82166731 None:intergenic 50.0%
GTTGTCCACTGGTGATCATG+AGG + chr1.1:82166701-82166720 None:intergenic 50.0%
TCCAAATACCCTGAGCTACC+TGG + chr1.1:82166007-82166026 None:intergenic 50.0%
TCCTCCCTGAATCACCTAGA+TGG - chr1.1:82166829-82166848 MS.gene74246:CDS 50.0%
TCCTCCCTGCATGATCAATG+AGG + chr1.1:82167202-82167221 None:intergenic 50.0%
! CTGACTCGCGAAACCTTCTT+GGG - chr1.1:82167687-82167706 MS.gene74246:CDS 50.0%
! GGTACTTGGCGTTGGATGTT+GGG - chr1.1:82166762-82166781 MS.gene74246:CDS 50.0%
! TCTGACTCGCGAAACCTTCT+TGG - chr1.1:82167686-82167705 MS.gene74246:CDS 50.0%
! TGGTACTTGGCGTTGGATGT+TGG - chr1.1:82166761-82166780 MS.gene74246:CDS 50.0%
!! GGACGCCTTCTTGTTGGTTT+AGG - chr1.1:82166588-82166607 MS.gene74246:CDS 50.0%
AGTACCAGGGACACGCGTAA+AGG + chr1.1:82166748-82166767 None:intergenic 55.0%
CAATCTACCCCAGGTAGCTC+AGG - chr1.1:82165995-82166014 MS.gene74246:CDS 55.0%
GCACTTGGATGCTTGCATGC+AGG - chr1.1:82166327-82166346 MS.gene74246:CDS 55.0%
GCCATCTAGGTGATTCAGGG+AGG + chr1.1:82166833-82166852 None:intergenic 55.0%
TGGAAAGAGAGAGCTTGGGG+CGG - chr1.1:82167644-82167663 MS.gene74246:CDS 55.0%
TTACGCGTGTCCCTGGTACT+TGG - chr1.1:82166748-82166767 MS.gene74246:CDS 55.0%
TTCGGCAATGTAGACGGGAG+CGG + chr1.1:82166634-82166653 None:intergenic 55.0%
TTGGAGCAGCAACAGGTGGT+TGG - chr1.1:82166457-82166476 MS.gene74246:CDS 55.0%
! CCCAGGTAGCTCAGGGTATT+TGG - chr1.1:82166003-82166022 MS.gene74246:CDS 55.0%
!!! GCTTTTTTCTCCCCCGGGAT+GGG - chr1.1:82167371-82167390 MS.gene74246:intron 55.0%
!!! TGCTTTTTTCTCCCCCGGGA+TGG - chr1.1:82167370-82167389 MS.gene74246:intron 55.0%
CTCGCTGCTGTCGCTGGTAT+TGG - chr1.1:82166079-82166098 MS.gene74246:CDS 60.0%
GAGTTCATTGCCCACGGCAC+CGG + chr1.1:82167398-82167417 None:intergenic 60.0%
GTGTCCCTGGTACTTGGCGT+TGG - chr1.1:82166754-82166773 MS.gene74246:CDS 60.0%
TCAGCAGCAGCAGCAGCATC+AGG - chr1.1:82167299-82167318 MS.gene74246:CDS 60.0%
TGATGCTGCTGCTGCTGCTG+AGG + chr1.1:82167300-82167319 None:intergenic 60.0%
! GCTGCTGTCGCTGGTATTGG+TGG - chr1.1:82166082-82166101 MS.gene74246:CDS 60.0%
CAGGGACACGCGTAAAGGCG+AGG + chr1.1:82166743-82166762 None:intergenic 65.0%
CTCGCCTTTACGCGTGTCCC+TGG - chr1.1:82166741-82166760 MS.gene74246:CDS 65.0%
GTAGACGGGAGCGGTGACAG+AGG + chr1.1:82166625-82166644 None:intergenic 65.0%
TTTCTCCCCCGGGATGGGAC+CGG - chr1.1:82167376-82167395 MS.gene74246:intron 65.0%
CTCGGTCTCGCTGCTGTCGC+TGG - chr1.1:82166073-82166092 MS.gene74246:CDS 70.0%
!! ACGGCACCGGTCCCATCCCG+GGG + chr1.1:82167385-82167404 None:intergenic 75.0%
!! CACGGCACCGGTCCCATCCC+GGG + chr1.1:82167386-82167405 None:intergenic 75.0%
!! CCACGGCACCGGTCCCATCC+CGG + chr1.1:82167387-82167406 None:intergenic 75.0%
!! CGGGATGGGACCGGTGCCGT+GGG - chr1.1:82167385-82167404 MS.gene74246:intron 75.0%
!! CCGGGATGGGACCGGTGCCG+TGG - chr1.1:82167384-82167403 MS.gene74246:intron 80.0%
!!! CGGCACCGGTCCCATCCCGG+GGG + chr1.1:82167384-82167403 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 82165974 82167727 82165974 ID=MS.gene74246
chr1.1 mRNA 82165974 82167727 82165974 ID=MS.gene74246.t1;Parent=MS.gene74246
chr1.1 exon 82167574 82167727 82167574 ID=MS.gene74246.t1.exon1;Parent=MS.gene74246.t1
chr1.1 CDS 82167574 82167727 82167574 ID=cds.MS.gene74246.t1;Parent=MS.gene74246.t1
chr1.1 exon 82165974 82167352 82165974 ID=MS.gene74246.t1.exon2;Parent=MS.gene74246.t1
chr1.1 CDS 82165974 82167352 82165974 ID=cds.MS.gene74246.t1;Parent=MS.gene74246.t1
Gene Sequence

>MS.gene74246

ATGACCAATACTACTATGGTACAATCTACCCCAGGTAGCTCAGGGTATTTGGATTTGTACCCTGAACGCAAAATGTCTTTTTTTAAGAATCCTTATATTCTCGGTCTCGCTGCTGTCGCTGGTATTGGTGGCTTGCTTTTTGGCTACGACACAGGTACGGTCCTACTATTTTATTTCCAAGACTCACACAAATTTACTTCATACATGCCATCATGTTCTATGTTTGATCCATCCATCTACTGAAATACTATTACTAATTAAGATCTTGTTGTCTTGTATCATATGTTAACTAACGTGGTTATATATAATTATTAACAGTGAATGACACAGTACTAATAATTAAATAAAAATTGGCACTTGGATGCTTGCATGCAGGTGTGATATCAGGAGCTCTTCTATACATAAAAGATGATTTTGAATCGGTTAGAGAAAGTAACATTCTGCAGGAAACAATAGTCAGCATGGCAATAGCTGGTGCAATAGTTGGAGCAGCAACAGGTGGTTGGATTAATGATGCTTACGGACGAAAGAAGGCAACTCTGATCGCAGATGTCATCTTCATTATTGGAGCAATTGGTATGGCTGCCGCACCTGATCCTTACATTCTCATAATCGGACGCCTTCTTGTTGGTTTAGGTGTCGGCATTGCCTCTGTCACCGCTCCCGTCTACATTGCCGAAGCATCACCTTCCGAAATCAGAGGTTCATTAGTCAGTACTAATTCCCTCATGATCACCAGTGGACAACTCCTTTCCTACATAGTTAACCTCGCCTTTACGCGTGTCCCTGGTACTTGGCGTTGGATGTTGGGTGTTTCAGCTGTCCCTGCACTTGTTCAATTCATTCTCATGCTTTTCCTCCCTGAATCACCTAGATGGCTTTTTATGAAGAATAGAAAGAATGAAGCTGTTGATGTCATTTCCAACATCTATGACTTGGCTCGTCTTGAAGACGAAGTTGATTTTCTAACAGCTGAGGCAGAACAAGACAGACAGAAAAATATGAATGTCAAATTTGGAGATGTTTTTAAATCTAAAGAAATCAGACTAGCATTCATGGTTGGAGCAGGATTGATGGTGTTCCAACAGTTTACTGGCATTAACACAGTGATGTACTACAGTCCAACCATTGTTCAAATGGCTGGATTTCAATCTAATGAGTTGGCTCTTCAAATCTCACTCTTCGTTGCAGCAATGAATGCTGTCGGAACTGTTCTTGGTATTTACCTCATTGATCATGCAGGGAGGAAGATATTAGCTCTTTGTAGCTTAGGAGGAGTGTTTACATCTTTGGTTCTCTTGTCTGTGGCATTCTCAAATCAATCCTCAGCAGCAGCAGCAGCATCAGGATCAAATACTACTGGATGGCTTGCAGTTTTGGGTTTGATACTGTATATTGCTTTTTTCTCCCCCGGGATGGGACCGGTGCCGTGGGCAATGAACTCAGAGATATATCCTAAAGAATATAGAGGAATTTGTGGTGGTATGTCAGCTACTGTGTGTTGGGTTTCCAATCTCATTGTGTCTCAGACATTTCTTTCCATTGCTGAAGCTTTAGGGACTGGTCCTACTTTCTTGATTCTTGCTGTCATAACCGTGCTTGCCTTTTTGTTTGTGCTTCTTTATGTTCCGGAGACTAAAGGATTGACCTTTGAAGAGGTTGAACTAATATGGAAAGAGAGAGCTTGGGGCGGCACCAACATTAACAACAACTCTGACTCGCGAAACCTTCTTGGGACGAACATTGATCAATAA
Protein sequence

>MS.gene74246.t1

MTNTTMVQSTPGSSGYLDLYPERKMSFFKNPYILGLAAVAGIGGLLFGYDTGVISGALLYIKDDFESVRESNILQETIVSMAIAGAIVGAATGGWINDAYGRKKATLIADVIFIIGAIGMAAAPDPYILIIGRLLVGLGVGIASVTAPVYIAEASPSEIRGSLVSTNSLMITSGQLLSYIVNLAFTRVPGTWRWMLGVSAVPALVQFILMLFLPESPRWLFMKNRKNEAVDVISNIYDLARLEDEVDFLTAEAEQDRQKNMNVKFGDVFKSKEIRLAFMVGAGLMVFQQFTGINTVMYYSPTIVQMAGFQSNELALQISLFVAAMNAVGTVLGIYLIDHAGRKILALCSLGGVFTSLVLLSVAFSNQSSAAAAASGSNTTGWLAVLGLILYIAFFSPGMGPVPWAMNSEIYPKEYRGICGGMSATVCWVSNLIVSQTFLSIAEALGTGPTFLILAVITVLAFLFVLLYVPETKGLTFEEVELIWKERAWGGTNINNNSDSRNLLGTNIDQ