Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75725.t1 | XP_003601587.2 | 95.2 | 913 | 39 | 2 | 1 | 912 | 1 | 909 | 0.00E+00 | 1724.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75725.t1 | Q6YSJ5 | 62.2 | 879 | 309 | 10 | 40 | 912 | 22 | 883 | 0.0e+00 | 1090.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75725.t1 | G7J9J9 | 95.2 | 913 | 39 | 2 | 1 | 912 | 1 | 909 | 0.0e+00 | 1724.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75725 | MS.gene99379 | PPI |
| MS.gene75725 | MS.gene37822 | PPI |
| MS.gene75725 | MS.gene39809 | PPI |
| MS.gene75725 | MS.gene022250 | PPI |
| MS.gene75725 | MS.gene25906 | PPI |
| MS.gene75725 | MS.gene39813 | PPI |
| MS.gene75725 | MS.gene074399 | PPI |
| MS.gene75725 | MS.gene016870 | PPI |
| MS.gene75725 | MS.gene016866 | PPI |
| MS.gene75725 | MS.gene70580 | PPI |
| MS.gene75725 | MS.gene99383 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75725.t1 | MTR_3g083300 | 95.181 | 913 | 39 | 2 | 1 | 912 | 1 | 909 | 0.0 | 1720 |
| MS.gene75725.t1 | MTR_5g087870 | 60.158 | 886 | 332 | 7 | 34 | 911 | 75 | 947 | 0.0 | 1076 |
| MS.gene75725.t1 | MTR_3g078647 | 58.248 | 879 | 343 | 7 | 40 | 911 | 61 | 922 | 0.0 | 1048 |
| MS.gene75725.t1 | MTR_5g087870 | 58.239 | 886 | 327 | 7 | 34 | 911 | 75 | 925 | 0.0 | 1031 |
| MS.gene75725.t1 | MTR_5g087890 | 58.314 | 878 | 345 | 9 | 34 | 911 | 35 | 891 | 0.0 | 1021 |
| MS.gene75725.t1 | MTR_6g043180 | 58.068 | 880 | 344 | 8 | 40 | 911 | 40 | 902 | 0.0 | 1019 |
| MS.gene75725.t1 | MTR_3g010650 | 53.295 | 880 | 380 | 13 | 40 | 912 | 21 | 876 | 0.0 | 923 |
| MS.gene75725.t1 | MTR_6g477980 | 36.275 | 918 | 489 | 25 | 42 | 912 | 241 | 1109 | 9.40e-160 | 497 |
| MS.gene75725.t1 | MTR_6g477980 | 36.275 | 918 | 489 | 25 | 42 | 912 | 247 | 1115 | 1.01e-159 | 497 |
| MS.gene75725.t1 | MTR_1g041345 | 36.039 | 924 | 494 | 30 | 31 | 912 | 111 | 979 | 1.36e-156 | 485 |
| MS.gene75725.t1 | MTR_2g059590 | 35.969 | 898 | 500 | 24 | 42 | 912 | 54 | 903 | 2.43e-156 | 482 |
| MS.gene75725.t1 | MTR_1g102630 | 35.281 | 924 | 505 | 27 | 31 | 912 | 106 | 978 | 3.57e-154 | 479 |
| MS.gene75725.t1 | MTR_4g113200 | 35.960 | 901 | 498 | 26 | 41 | 912 | 26 | 876 | 1.24e-152 | 472 |
| MS.gene75725.t1 | MTR_4g056430 | 34.081 | 936 | 542 | 26 | 2 | 912 | 86 | 971 | 2.61e-148 | 463 |
| MS.gene75725.t1 | MTR_4g056470 | 33.520 | 895 | 526 | 21 | 42 | 912 | 159 | 1008 | 1.38e-142 | 449 |
| MS.gene75725.t1 | MTR_5g042590 | 31.636 | 923 | 531 | 28 | 35 | 912 | 149 | 1016 | 2.72e-121 | 393 |
| MS.gene75725.t1 | MTR_2g059790 | 38.409 | 591 | 334 | 12 | 340 | 912 | 16 | 594 | 1.42e-117 | 371 |
| MS.gene75725.t1 | MTR_2g059590 | 33.333 | 663 | 387 | 18 | 42 | 687 | 54 | 678 | 8.09e-95 | 314 |
| MS.gene75725.t1 | MTR_4g083610 | 29.899 | 796 | 461 | 25 | 112 | 874 | 194 | 925 | 1.67e-83 | 289 |
| MS.gene75725.t1 | MTR_2g028910 | 26.958 | 983 | 547 | 38 | 3 | 911 | 143 | 1028 | 3.81e-78 | 275 |
| MS.gene75725.t1 | MTR_3g101730 | 32.402 | 179 | 72 | 5 | 639 | 813 | 39 | 172 | 9.10e-18 | 82.4 |
| MS.gene75725.t1 | MTR_7g107230 | 43.750 | 96 | 40 | 1 | 479 | 574 | 140 | 221 | 5.08e-16 | 79.3 |
| MS.gene75725.t1 | MTR_6g037320 | 47.297 | 74 | 39 | 0 | 594 | 667 | 1 | 74 | 5.14e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75725.t1 | AT2G32940 | 62.258 | 877 | 308 | 8 | 37 | 912 | 24 | 878 | 0.0 | 1075 |
| MS.gene75725.t1 | AT2G27040 | 56.517 | 890 | 362 | 8 | 31 | 912 | 52 | 924 | 0.0 | 1017 |
| MS.gene75725.t1 | AT2G27040 | 56.517 | 890 | 362 | 8 | 31 | 912 | 52 | 924 | 0.0 | 1017 |
| MS.gene75725.t1 | AT5G21150 | 56.831 | 871 | 354 | 8 | 46 | 912 | 44 | 896 | 0.0 | 1009 |
| MS.gene75725.t1 | AT5G21030 | 50.714 | 911 | 376 | 17 | 15 | 912 | 4 | 854 | 0.0 | 870 |
| MS.gene75725.t1 | AT5G21030 | 50.714 | 911 | 372 | 18 | 15 | 912 | 4 | 850 | 0.0 | 864 |
| MS.gene75725.t1 | AT1G48410 | 36.491 | 929 | 470 | 27 | 42 | 912 | 182 | 1048 | 2.78e-158 | 492 |
| MS.gene75725.t1 | AT1G48410 | 36.452 | 930 | 471 | 27 | 42 | 912 | 182 | 1050 | 8.06e-158 | 491 |
| MS.gene75725.t1 | AT1G48410 | 36.452 | 930 | 471 | 27 | 42 | 912 | 182 | 1050 | 8.06e-158 | 491 |
| MS.gene75725.t1 | AT5G43810 | 35.147 | 919 | 487 | 28 | 42 | 912 | 131 | 988 | 8.71e-152 | 473 |
| MS.gene75725.t1 | AT5G43810 | 35.147 | 919 | 487 | 28 | 42 | 912 | 131 | 988 | 8.71e-152 | 473 |
| MS.gene75725.t1 | AT5G43810 | 35.147 | 919 | 487 | 28 | 42 | 912 | 131 | 988 | 8.71e-152 | 473 |
| MS.gene75725.t1 | AT5G43810 | 35.147 | 919 | 487 | 28 | 42 | 912 | 131 | 988 | 8.71e-152 | 473 |
| MS.gene75725.t1 | AT2G27880 | 35.580 | 905 | 484 | 29 | 46 | 912 | 154 | 997 | 4.60e-145 | 456 |
| MS.gene75725.t1 | AT1G69440 | 32.004 | 903 | 508 | 26 | 46 | 912 | 158 | 990 | 3.46e-115 | 376 |
| MS.gene75725.t1 | AT1G31290 | 30.823 | 863 | 489 | 28 | 52 | 874 | 275 | 1069 | 7.39e-92 | 315 |
| MS.gene75725.t1 | AT1G31290 | 30.823 | 863 | 489 | 28 | 52 | 874 | 313 | 1107 | 1.16e-91 | 315 |
| MS.gene75725.t1 | AT1G31290 | 30.823 | 863 | 489 | 28 | 52 | 874 | 349 | 1143 | 1.59e-91 | 315 |
| MS.gene75725.t1 | AT1G31280 | 29.366 | 899 | 500 | 33 | 23 | 874 | 153 | 963 | 6.42e-91 | 311 |
Find 207 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCAAGAATTCAAAATTTA+TGG | 0.067326 | 3.3:-70071194 | MS.gene75725:CDS |
| TCCATTGTTCTTTCCCTTAA+AGG | 0.138733 | 3.3:-70071860 | MS.gene75725:CDS |
| CATATGACTCGATCCCTTTA+AGG | 0.150762 | 3.3:+70071846 | None:intergenic |
| TTACAGGCTATTGGAAATTA+TGG | 0.175853 | 3.3:-70070523 | MS.gene75725:intron |
| AATGGACTGCAAGGGTATTT+TGG | 0.214443 | 3.3:+70071877 | None:intergenic |
| TTGCTGTCATCTAAACTTAA+TGG | 0.226920 | 3.3:-70069794 | MS.gene75725:CDS |
| GGGAGGATTGTCTCTTAATA+TGG | 0.249429 | 3.3:-70071527 | MS.gene75725:CDS |
| AGCCATCAGATATTGGTTAT+TGG | 0.253396 | 3.3:-70070081 | MS.gene75725:CDS |
| ACATACATTATACTGGAAAA+AGG | 0.260122 | 3.3:+70072350 | None:intergenic |
| TGCACACAACCTTTATTATC+TGG | 0.271589 | 3.3:+70066330 | None:intergenic |
| AACCTCATCAATATGTTTAT+AGG | 0.277854 | 3.3:+70066179 | None:intergenic |
| CATTAAGATTTACAGGCTAT+TGG | 0.284179 | 3.3:-70070532 | MS.gene75725:intron |
| TTGAACTCAAATTTATTATC+TGG | 0.285094 | 3.3:+70072114 | None:intergenic |
| AAAATTCCACCTTCCATTAC+TGG | 0.289479 | 3.3:+70070232 | None:intergenic |
| TCAGGAGAAAACTGATTAAT+AGG | 0.290755 | 3.3:-70072221 | MS.gene75725:CDS |
| TCCTCCTCTAATAAAGTAAA+TGG | 0.290968 | 3.3:+70069869 | None:intergenic |
| CAACTCAAATTATTCTCTTC+AGG | 0.295576 | 3.3:-70067123 | MS.gene75725:intron |
| AAGAGCTTCCAAAGTTGAAT+TGG | 0.314384 | 3.3:-70065346 | MS.gene75725:CDS |
| CTTTGTAAATTTCAGGGCCT+TGG | 0.317902 | 3.3:-70069641 | MS.gene75725:intron |
| TTGCTGGCAATAGAGCATTC+TGG | 0.317928 | 3.3:-70069377 | MS.gene75725:CDS |
| GCCATCAGATATTGGTTATT+GGG | 0.320162 | 3.3:-70070080 | MS.gene75725:CDS |
| CCATTGTTCTTTCCCTTAAA+GGG | 0.323956 | 3.3:-70071859 | MS.gene75725:CDS |
| ACTTCTTAAAATCAATTCTA+AGG | 0.326188 | 3.3:-70069535 | MS.gene75725:intron |
| CTTCTACAGCCATCAGATAT+TGG | 0.328425 | 3.3:-70070088 | MS.gene75725:CDS |
| TCCCTGTGTAAGACGAAAAC+TGG | 0.331692 | 3.3:+70071546 | None:intergenic |
| TTTAGCAAAATATTCATATA+CGG | 0.341239 | 3.3:+70070960 | None:intergenic |
| CACGTGTTGCTTGATGAAAT+TGG | 0.343499 | 3.3:-70065728 | MS.gene75725:CDS |
| TGCTGGCAATAGAGCATTCT+GGG | 0.347508 | 3.3:-70069376 | MS.gene75725:CDS |
| GAATAGGTTGGGAGAGCTAT+TGG | 0.351022 | 3.3:+70072465 | None:intergenic |
| TCCTGATGTGCTGTCTAGTA+TGG | 0.352618 | 3.3:-70072496 | MS.gene75725:CDS |
| ATGTAGAAATCGTAATTTCT+TGG | 0.356720 | 3.3:+70065960 | None:intergenic |
| CAAAGTTGAATTGGAATGTC+AGG | 0.363699 | 3.3:-70065337 | MS.gene75725:CDS |
| AAAAGGATGATGGTATTATC+AGG | 0.373300 | 3.3:-70068988 | MS.gene75725:intron |
| CAACTTTGGAAGCTCTTGAA+TGG | 0.375153 | 3.3:+70065352 | None:intergenic |
| ACTTTCCATGTCTTGATGTT+GGG | 0.375386 | 3.3:-70070906 | MS.gene75725:CDS |
| GCTCTATATCTCGAAATTAG+AGG | 0.379869 | 3.3:+70069100 | None:intergenic |
| GCCCTCGCGAGGAAAATAAA+AGG | 0.383421 | 3.3:-70071952 | MS.gene75725:CDS |
| GATAGGAGAAAATCAATTAC+AGG | 0.385642 | 3.3:+70071384 | None:intergenic |
| AACTTTGGAAGCTCTTGAAT+GGG | 0.386107 | 3.3:+70065353 | None:intergenic |
| AGCCTTACAGCAGCTGTTGA+TGG | 0.387959 | 3.3:+70069272 | None:intergenic |
| TGGAGGAATAAATTCTTTGC+TGG | 0.397191 | 3.3:-70069393 | MS.gene75725:CDS |
| TCACTTGACATACATTATAC+TGG | 0.400607 | 3.3:+70072343 | None:intergenic |
| GCGGCCATTTACTTTATTAG+AGG | 0.401735 | 3.3:-70069873 | MS.gene75725:CDS |
| AGGTTGCAGCTGTGCTCCTC+TGG | 0.405009 | 3.3:+70065571 | None:intergenic |
| TACTTTCCATGTCTTGATGT+TGG | 0.405546 | 3.3:-70070907 | MS.gene75725:CDS |
| GGGATGTTTCCCTCTGAATC+AGG | 0.405805 | 3.3:+70065374 | None:intergenic |
| TCAAGAACTCTTCCTTCAAC+TGG | 0.410088 | 3.3:+70070442 | None:intergenic |
| CCATCCCTAAAATCATCGTT+GGG | 0.410555 | 3.3:+70069330 | None:intergenic |
| ATATGACTCGATCCCTTTAA+GGG | 0.411344 | 3.3:+70071847 | None:intergenic |
| AGCAGCAGTACTGAGAGTTT+TGG | 0.411522 | 3.3:-70071986 | MS.gene75725:intron |
| CTGACATTCCAATTCAACTT+TGG | 0.412092 | 3.3:+70065338 | None:intergenic |
| CACTTACAGTTGTTGAATGC+AGG | 0.412851 | 3.3:+70071157 | None:intergenic |
| CTGTTGAAAGCAAGGGCATC+AGG | 0.419930 | 3.3:-70072239 | MS.gene75725:CDS |
| AGGCGGAGTAGAAGGAGTTC+GGG | 0.420984 | 3.3:-70071578 | MS.gene75725:CDS |
| TGGTGAATCTCAATTTCAAC+AGG | 0.422456 | 3.3:-70066372 | MS.gene75725:CDS |
| TGCCACAATTACAGTGAACT+TGG | 0.423102 | 3.3:+70066140 | None:intergenic |
| TTATGTTGGATTTAGGTTGT+TGG | 0.423726 | 3.3:-70069136 | MS.gene75725:intron |
| CAAGTTCAGAAGAGTATGTT+TGG | 0.425625 | 3.3:+70072193 | None:intergenic |
| CGTTGGGGTATCTTTAATCA+AGG | 0.429944 | 3.3:+70069346 | None:intergenic |
| TAGCTTGAAACAGCTTTGTA+TGG | 0.436156 | 3.3:+70066106 | None:intergenic |
| AGCACAGCTGCAACCTCAAT+TGG | 0.437891 | 3.3:-70065564 | MS.gene75725:intron |
| CAGCCTACTGATAATAGAAT+AGG | 0.438878 | 3.3:+70072449 | None:intergenic |
| CAAACATACTCTTCTGAACT+TGG | 0.446873 | 3.3:-70072192 | MS.gene75725:CDS |
| AGGAAGTGTCTGAGTGATGT+TGG | 0.447585 | 3.3:-70069615 | MS.gene75725:CDS |
| AGAGCTTAACCAGATAATAA+AGG | 0.448697 | 3.3:-70066339 | MS.gene75725:intron |
| GCATGGTGGGCATAGTATAT+AGG | 0.450067 | 3.3:+70065455 | None:intergenic |
| TGAGGCAGCGAGCAGCTAAC+AGG | 0.452726 | 3.3:-70071784 | MS.gene75725:intron |
| AGAAAATCAATTACAGGTCC+AGG | 0.458109 | 3.3:+70071390 | None:intergenic |
| GGAAGTGTCTGAGTGATGTT+GGG | 0.461376 | 3.3:-70069614 | MS.gene75725:CDS |
| TACTGATAATAGAATAGGTT+GGG | 0.462123 | 3.3:+70072454 | None:intergenic |
| AGGTTGTTGGATCTCGATGC+TGG | 0.463185 | 3.3:-70069123 | MS.gene75725:CDS |
| GAGGCGGAGTAGAAGGAGTT+CGG | 0.465739 | 3.3:-70071579 | MS.gene75725:CDS |
| TTCTGATGGCGTACCAATTG+AGG | 0.467308 | 3.3:+70065551 | None:intergenic |
| GAATAATTTGAGTTGGTTTG+CGG | 0.468297 | 3.3:+70067131 | None:intergenic |
| TCGAGGAATTTCATCGATGT+TGG | 0.470697 | 3.3:-70071601 | MS.gene75725:CDS |
| GAATCAATCATCTCCACCTT+AGG | 0.471437 | 3.3:+70069058 | None:intergenic |
| AAATTCCACCTTCCATTACT+GGG | 0.473459 | 3.3:+70070233 | None:intergenic |
| GGGAACCTCGTTATATTGAC+TGG | 0.475105 | 3.3:-70071347 | MS.gene75725:CDS |
| AGGAATTTCATCGATGTTGG+AGG | 0.476725 | 3.3:-70071598 | MS.gene75725:CDS |
| TAATTCTCAGGATGCATTGA+GGG | 0.477606 | 3.3:-70071822 | MS.gene75725:CDS |
| TTTCCCTCTGAATCAGGACT+TGG | 0.478734 | 3.3:+70065380 | None:intergenic |
| TTGATGTTGGGAAGCCAAAT+CGG | 0.480224 | 3.3:-70070894 | MS.gene75725:CDS |
| CATTTGAGCTGCAGCATGGT+GGG | 0.481186 | 3.3:+70065442 | None:intergenic |
| TTCTACATGTGTGCTCATGC+TGG | 0.485331 | 3.3:-70065945 | MS.gene75725:CDS |
| AGGCTGAGTGTCGGGACCAC+AGG | 0.487528 | 3.3:-70072432 | MS.gene75725:CDS |
| GATGTTGGAGGCGGAGTAGA+AGG | 0.490244 | 3.3:-70071586 | MS.gene75725:CDS |
| TCCACAGCTTCTTCAAAGTC+AGG | 0.492479 | 3.3:+70072543 | None:intergenic |
| AAATTTCAGGGCCTTGGAAA+AGG | 0.493150 | 3.3:-70069635 | MS.gene75725:intron |
| TTAGGGATGGATGTCTCTCA+TGG | 0.493402 | 3.3:-70069317 | MS.gene75725:CDS |
| CGAGTCATATGCTAATTCTC+AGG | 0.493752 | 3.3:-70071834 | MS.gene75725:CDS |
| GATGTCTCTCATGGTTCCCC+TGG | 0.494710 | 3.3:-70069308 | MS.gene75725:CDS |
| TCCATACTAGACAGCACATC+AGG | 0.495360 | 3.3:+70072495 | None:intergenic |
| AAGCAATTCACTCCAGTTGA+AGG | 0.497118 | 3.3:-70070454 | MS.gene75725:CDS |
| CTAGATTTCTATAGTTCAAG+TGG | 0.497260 | 3.3:-70067157 | MS.gene75725:CDS |
| GAAGACTGCTTCCCCAGTAA+TGG | 0.502847 | 3.3:-70070245 | MS.gene75725:CDS |
| CTGAAGAGAATAATTTGAGT+TGG | 0.507739 | 3.3:+70067124 | None:intergenic |
| TCAAATTTATTATCTGGAAG+AGG | 0.508444 | 3.3:+70072120 | None:intergenic |
| GCTGTTTCAAGCTAATGCTC+TGG | 0.511577 | 3.3:-70066097 | MS.gene75725:CDS |
| TCCATCCCTAAAATCATCGT+TGG | 0.515662 | 3.3:+70069329 | None:intergenic |
| ACTAAAGATGCTCTTTGCAC+AGG | 0.518323 | 3.3:+70070667 | None:intergenic |
| ATATTCTTATTACAGCTTGG+AGG | 0.519143 | 3.3:-70069410 | MS.gene75725:intron |
| TAAAAGAACTGTTGAAAGCA+AGG | 0.519488 | 3.3:-70072247 | MS.gene75725:CDS |
| AACGAGGTTCCCTCACACTC+TGG | 0.519744 | 3.3:+70071358 | None:intergenic |
| GGAGGATTGTCTCTTAATAT+GGG | 0.521120 | 3.3:-70071526 | MS.gene75725:intron |
| TTATCAGTAGGCTGAGTGTC+GGG | 0.522170 | 3.3:-70072440 | MS.gene75725:CDS |
| GCCATTTACTTTATTAGAGG+AGG | 0.522401 | 3.3:-70069870 | MS.gene75725:CDS |
| GAAAATTTAACCCTGTTGCA+AGG | 0.523968 | 3.3:-70069835 | MS.gene75725:CDS |
| GGAGGTGATGGAGGTAAAGC+TGG | 0.527652 | 3.3:+70072516 | None:intergenic |
| CGTGGAAAGAGGGTGTCTCT+TGG | 0.527878 | 3.3:-70071650 | MS.gene75725:intron |
| ACACAAAGAATCAACTTTGG+TGG | 0.530353 | 3.3:+70069770 | None:intergenic |
| ATGTGGAATGAGCAAGGGAA+TGG | 0.530588 | 3.3:-70069999 | MS.gene75725:intron |
| CCCTCACACTCTGGTTGGAT+AGG | 0.531323 | 3.3:+70071367 | None:intergenic |
| AAAATTTAACCCTGTTGCAA+GGG | 0.534798 | 3.3:-70069834 | MS.gene75725:CDS |
| TTCTTGTTCAGGGATGGAGT+TGG | 0.535856 | 3.3:-70066392 | MS.gene75725:intron |
| ATGGAATATCTGATCGGCCA+GGG | 0.537320 | 3.3:+70069291 | None:intergenic |
| TGTAAGATCACAGTCTCCTA+AGG | 0.538809 | 3.3:-70069074 | MS.gene75725:CDS |
| GCATCATTCATCTTATCCAC+AGG | 0.540020 | 3.3:+70069025 | None:intergenic |
| AATTTCATCGATGTTGGAGG+CGG | 0.540242 | 3.3:-70071595 | MS.gene75725:CDS |
| TCCCAAGTTCACTGTAATTG+TGG | 0.549617 | 3.3:-70066142 | MS.gene75725:CDS |
| GGAAAGAACAATGGACTGCA+AGG | 0.550385 | 3.3:+70071868 | None:intergenic |
| ATAATGCCTTTGTATACCGC+TGG | 0.550641 | 3.3:+70070692 | None:intergenic |
| ACTTACAGTTGTTGAATGCA+GGG | 0.551345 | 3.3:+70071158 | None:intergenic |
| ACATGGAAAGTAAGCAGAAG+AGG | 0.552059 | 3.3:+70070918 | None:intergenic |
| GATGGAATATCTGATCGGCC+AGG | 0.555026 | 3.3:+70069290 | None:intergenic |
| AAAGAGGGTGTCTCTTGGTA+AGG | 0.555122 | 3.3:-70071645 | MS.gene75725:intron |
| GACAGCACATCAGGAGGTGA+TGG | 0.564571 | 3.3:+70072504 | None:intergenic |
| TCCTATCCAACCAGAGTGTG+AGG | 0.566604 | 3.3:-70071368 | MS.gene75725:CDS |
| ATCTCCAAGTCCTGATTCAG+AGG | 0.568425 | 3.3:-70065384 | MS.gene75725:CDS |
| CTAATTCTCAGGATGCATTG+AGG | 0.568737 | 3.3:-70071823 | MS.gene75725:CDS |
| AAGACACAAAGAATCAACTT+TGG | 0.569909 | 3.3:+70069767 | None:intergenic |
| TCATTTGAGCTGCAGCATGG+TGG | 0.570376 | 3.3:+70065441 | None:intergenic |
| GGCAAAAGCTTTGCGTACGA+TGG | 0.570982 | 3.3:-70072168 | MS.gene75725:CDS |
| CAACCTATTCTATTATCAGT+AGG | 0.570991 | 3.3:-70072452 | MS.gene75725:CDS |
| GAAATTGGATTCTCACCAGA+TGG | 0.572088 | 3.3:-70065713 | MS.gene75725:CDS |
| TCGTTATATTGACTGGGCAA+AGG | 0.573639 | 3.3:-70071340 | MS.gene75725:intron |
| GCCTTTGTATACCGCTGGAG+GGG | 0.575742 | 3.3:+70070697 | None:intergenic |
| TGCCTTTGTATACCGCTGGA+GGG | 0.578738 | 3.3:+70070696 | None:intergenic |
| AAAGGTTGCATCTGTAGCAT+CGG | 0.579610 | 3.3:+70072368 | None:intergenic |
| TTCTTTGTGTCTTGCCAGAG+AGG | 0.579962 | 3.3:-70069757 | MS.gene75725:CDS |
| GATTAGATGTGGAATGAGCA+AGG | 0.580659 | 3.3:-70070005 | MS.gene75725:CDS |
| TGATTCTCTATTCAAGCCTG+TGG | 0.582586 | 3.3:-70069041 | MS.gene75725:CDS |
| AGCTGCTCGCTGCCTCAGTA+CGG | 0.583868 | 3.3:+70071790 | None:intergenic |
| AAAAGAACTGTTGAAAGCAA+GGG | 0.585910 | 3.3:-70072246 | MS.gene75725:CDS |
| ACATACTCTTCTGAACTTGG+TGG | 0.585999 | 3.3:-70072189 | MS.gene75725:CDS |
| AAAGTTGAATTGGAATGTCA+GGG | 0.586502 | 3.3:-70065336 | MS.gene75725:CDS |
| GCTCTGGAAAACGTTCCTCC+TGG | 0.588624 | 3.3:-70066081 | MS.gene75725:intron |
| TTCTCATTTGAGCTGCAGCA+TGG | 0.590822 | 3.3:+70065438 | None:intergenic |
| TATTGATCAGTGATCTTGAG+AGG | 0.590847 | 3.3:+70069570 | None:intergenic |
| TTTGAGACACAGTTGAAGGT+AGG | 0.591550 | 3.3:-70070275 | MS.gene75725:intron |
| ACCTGACTTTGAAGAAGCTG+TGG | 0.593647 | 3.3:-70072544 | MS.gene75725:CDS |
| CCCTTTAAGGGAAAGAACAA+TGG | 0.596031 | 3.3:+70071859 | None:intergenic |
| GTTCACTTGTTCCCCTCCAG+CGG | 0.598429 | 3.3:-70070708 | MS.gene75725:CDS |
| GCCCAATAACCAATATCTGA+TGG | 0.600894 | 3.3:+70070079 | None:intergenic |
| CTACTGATAATAGAATAGGT+TGG | 0.603547 | 3.3:+70072453 | None:intergenic |
| AGCAACACGTGATAATGCAC+AGG | 0.603754 | 3.3:+70065740 | None:intergenic |
| ATTGATCAGTGATCTTGAGA+GGG | 0.604848 | 3.3:+70069571 | None:intergenic |
| ACAAGGGAGCTGATTAGATG+TGG | 0.605031 | 3.3:-70070016 | MS.gene75725:CDS |
| ATTATCAGTAGGCTGAGTGT+CGG | 0.606927 | 3.3:-70072441 | MS.gene75725:CDS |
| GTTGGGGTATCTTTAATCAA+GGG | 0.607083 | 3.3:+70069347 | None:intergenic |
| ACTTTGGAAGCTCTTGAATG+GGG | 0.607139 | 3.3:+70065354 | None:intergenic |
| TTCATATACGGTAATATCCA+CGG | 0.608023 | 3.3:+70070972 | None:intergenic |
| AGGTTCCCTCACACTCTGGT+TGG | 0.610864 | 3.3:+70071362 | None:intergenic |
| ACAACGACGATCATAAAACC+TGG | 0.611593 | 3.3:-70071408 | MS.gene75725:CDS |
| AGCACATCAGGAGGTGATGG+AGG | 0.613682 | 3.3:+70072507 | None:intergenic |
| ATTAAGTTTAGATGACAGCA+AGG | 0.615537 | 3.3:+70069796 | None:intergenic |
| ATATATAATAGGGAACGTCT+AGG | 0.616244 | 3.3:-70065763 | MS.gene75725:intron |
| AAGATCACAGTCTCCTAAGG+TGG | 0.617635 | 3.3:-70069071 | MS.gene75725:CDS |
| ATGCCTTTGTATACCGCTGG+AGG | 0.619085 | 3.3:+70070695 | None:intergenic |
| GGAACCTCGTTATATTGACT+GGG | 0.619345 | 3.3:-70071346 | MS.gene75725:CDS |
| GTGGATAAGATGAATGATGC+TGG | 0.619986 | 3.3:-70069022 | MS.gene75725:CDS |
| GTGATACTAGTTACATAACA+AGG | 0.620176 | 3.3:-70070033 | MS.gene75725:CDS |
| TTCTTGAAGAAACATTTGCA+AGG | 0.623575 | 3.3:-70072086 | MS.gene75725:intron |
| GGCCTATAAACATATTGATG+AGG | 0.628880 | 3.3:-70066181 | MS.gene75725:CDS |
| GAAAGAACTTTGTACACAGT+GGG | 0.633260 | 3.3:-70072144 | MS.gene75725:CDS |
| GCCACAATTACAGTGAACTT+GGG | 0.633960 | 3.3:+70066141 | None:intergenic |
| GCTTCCCCAGTAATGGAAGG+TGG | 0.637271 | 3.3:-70070238 | MS.gene75725:CDS |
| AGAAAGAACTTTGTACACAG+TGG | 0.637549 | 3.3:-70072145 | MS.gene75725:CDS |
| TGTGCTGTCTAGTATGGAAG+CGG | 0.638258 | 3.3:-70072490 | MS.gene75725:CDS |
| GGCTTCCCAACATCAAGACA+TGG | 0.639701 | 3.3:+70070901 | None:intergenic |
| AATTCCACCTTCCATTACTG+GGG | 0.639980 | 3.3:+70070234 | None:intergenic |
| CCTATCCAACCAGAGTGTGA+GGG | 0.641143 | 3.3:-70071367 | MS.gene75725:CDS |
| AAGAGGTCAGCTCAATGCCA+CGG | 0.643931 | 3.3:+70070935 | None:intergenic |
| GTCAATAGAAATACCACATG+CGG | 0.644333 | 3.3:+70070477 | None:intergenic |
| TCCCCTCCAGCGGTATACAA+AGG | 0.644422 | 3.3:-70070698 | MS.gene75725:CDS |
| GAAAGAACAATGGACTGCAA+GGG | 0.645951 | 3.3:+70071869 | None:intergenic |
| ACTGCTTCCCCAGTAATGGA+AGG | 0.646246 | 3.3:-70070241 | MS.gene75725:CDS |
| TGGAATATCTGATCGGCCAG+GGG | 0.648815 | 3.3:+70069292 | None:intergenic |
| TGCTAATGGAAGCCCTCGCG+AGG | 0.649571 | 3.3:-70071963 | MS.gene75725:CDS |
| CAATAACTCGGAGCAGACCG+TGG | 0.649994 | 3.3:-70070989 | MS.gene75725:CDS |
| ATTAGATGTGGAATGAGCAA+GGG | 0.654490 | 3.3:-70070004 | MS.gene75725:CDS |
| CTGTTGATGGAATATCTGAT+CGG | 0.655109 | 3.3:+70069285 | None:intergenic |
| GATGCTGTTCTTGCCGCATG+TGG | 0.655400 | 3.3:-70070490 | MS.gene75725:CDS |
| TCTCCAAGTCCTGATTCAGA+GGG | 0.656047 | 3.3:-70065383 | MS.gene75725:CDS |
| AGAATTCAACAAACCTCCAG+AGG | 0.657878 | 3.3:+70070859 | None:intergenic |
| GGTGATGGAGGTAAAGCTGG+TGG | 0.663403 | 3.3:+70072519 | None:intergenic |
| CATCCCTAAAATCATCGTTG+GGG | 0.665242 | 3.3:+70069331 | None:intergenic |
| AAATGGAGAAGACAATAACT+CGG | 0.665330 | 3.3:-70071001 | MS.gene75725:CDS |
| AAGAGTTCTTGAGACACCAA+AGG | 0.666572 | 3.3:-70070431 | MS.gene75725:intron |
| TTGATCAGTGATCTTGAGAG+GGG | 0.679194 | 3.3:+70069572 | None:intergenic |
| AGTATTTACAGAATATTGAG+CGG | 0.680400 | 3.3:-70069892 | MS.gene75725:intron |
| TGATACTAGTTACATAACAA+GGG | 0.689799 | 3.3:-70070032 | MS.gene75725:CDS |
| ATACTAGACAGCACATCAGG+AGG | 0.702332 | 3.3:+70072498 | None:intergenic |
| GAAGTGTCTGAGTGATGTTG+GGG | 0.703380 | 3.3:-70069613 | MS.gene75725:CDS |
| GGGTTCTTGATACCGTACTG+AGG | 0.710755 | 3.3:-70071802 | MS.gene75725:CDS |
| TCAGTCAAAGACATTCACAG+TGG | 0.721924 | 3.3:-70071915 | MS.gene75725:CDS |
| GGCGGAGTAGAAGGAGTTCG+GGG | 0.726067 | 3.3:-70071577 | MS.gene75725:CDS |
| TTTGCCCAGTCAATATAACG+AGG | 0.751855 | 3.3:+70071342 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 70065316 | 70072577 | 70065316 | ID=MS.gene75725 |
| chr3.3 | mRNA | 70065316 | 70072577 | 70065316 | ID=MS.gene75725.t1;Parent=MS.gene75725 |
| chr3.3 | exon | 70072356 | 70072577 | 70072356 | ID=MS.gene75725.t1.exon1;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70072356 | 70072577 | 70072356 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70072087 | 70072289 | 70072087 | ID=MS.gene75725.t1.exon2;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70072087 | 70072289 | 70072087 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70071785 | 70072003 | 70071785 | ID=MS.gene75725.t1.exon3;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70071785 | 70072003 | 70071785 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70071527 | 70071663 | 70071527 | ID=MS.gene75725.t1.exon4;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70071527 | 70071663 | 70071527 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70071341 | 70071438 | 70071341 | ID=MS.gene75725.t1.exon5;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70071341 | 70071438 | 70071341 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70071164 | 70071261 | 70071164 | ID=MS.gene75725.t1.exon6;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70071164 | 70071261 | 70071164 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70070873 | 70071041 | 70070873 | ID=MS.gene75725.t1.exon7;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70070873 | 70071041 | 70070873 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70070618 | 70070734 | 70070618 | ID=MS.gene75725.t1.exon8;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70070618 | 70070734 | 70070618 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70070432 | 70070539 | 70070432 | ID=MS.gene75725.t1.exon9;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70070432 | 70070539 | 70070432 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70070223 | 70070285 | 70070223 | ID=MS.gene75725.t1.exon10;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70070223 | 70070285 | 70070223 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70070000 | 70070113 | 70070000 | ID=MS.gene75725.t1.exon11;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70070000 | 70070113 | 70070000 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70069738 | 70069903 | 70069738 | ID=MS.gene75725.t1.exon12;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70069738 | 70069903 | 70069738 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70069536 | 70069648 | 70069536 | ID=MS.gene75725.t1.exon13;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70069536 | 70069648 | 70069536 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70069280 | 70069417 | 70069280 | ID=MS.gene75725.t1.exon14;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70069280 | 70069417 | 70069280 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70068989 | 70069143 | 70068989 | ID=MS.gene75725.t1.exon15;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70068989 | 70069143 | 70068989 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70067124 | 70067189 | 70067124 | ID=MS.gene75725.t1.exon16;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70067124 | 70067189 | 70067124 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70066340 | 70066403 | 70066340 | ID=MS.gene75725.t1.exon17;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70066340 | 70066403 | 70066340 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70066082 | 70066202 | 70066082 | ID=MS.gene75725.t1.exon18;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70066082 | 70066202 | 70066082 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70065938 | 70066011 | 70065938 | ID=MS.gene75725.t1.exon19;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70065938 | 70066011 | 70065938 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70065680 | 70065774 | 70065680 | ID=MS.gene75725.t1.exon20;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70065680 | 70065774 | 70065680 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70065565 | 70065596 | 70065565 | ID=MS.gene75725.t1.exon21;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70065565 | 70065596 | 70065565 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| chr3.3 | exon | 70065316 | 70065482 | 70065316 | ID=MS.gene75725.t1.exon22;Parent=MS.gene75725.t1 |
| chr3.3 | CDS | 70065316 | 70065482 | 70065316 | ID=cds.MS.gene75725.t1;Parent=MS.gene75725.t1 |
| Gene Sequence |
| Protein sequence |