AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene016870

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016870.t1 MTR_5g087870 87.199 914 98 3 1 901 41 948 0.0 1633
MS.gene016870.t1 MTR_5g087890 89.012 901 90 4 1 901 1 892 0.0 1610
MS.gene016870.t1 MTR_5g087870 85.449 914 92 3 1 901 41 926 0.0 1590
MS.gene016870.t1 MTR_6g043180 78.700 892 173 4 20 901 19 903 0.0 1454
MS.gene016870.t1 MTR_3g078647 76.723 885 183 6 29 901 50 923 0.0 1423
MS.gene016870.t1 MTR_3g010650 59.158 879 342 7 28 900 8 875 0.0 1070
MS.gene016870.t1 MTR_3g083300 59.453 878 341 8 35 900 34 908 0.0 1021
MS.gene016870.t1 MTR_4g056430 35.367 885 510 26 43 900 121 970 8.74e-159 490
MS.gene016870.t1 MTR_6g477980 35.224 917 486 23 43 900 241 1108 1.41e-158 494
MS.gene016870.t1 MTR_6g477980 35.224 917 486 23 43 900 247 1114 2.35e-158 493
MS.gene016870.t1 MTR_2g059590 34.347 888 516 22 42 900 53 902 2.66e-157 484
MS.gene016870.t1 MTR_4g056470 35.666 886 505 22 43 900 159 1007 6.44e-154 479
MS.gene016870.t1 MTR_1g102630 34.184 901 510 24 43 900 117 977 2.97e-153 476
MS.gene016870.t1 MTR_4g113200 34.494 890 512 23 42 900 26 875 1.24e-151 469
MS.gene016870.t1 MTR_1g041345 33.853 898 513 24 43 900 122 978 7.05e-150 467
MS.gene016870.t1 MTR_2g059790 37.833 600 342 13 322 900 4 593 6.19e-121 380
MS.gene016870.t1 MTR_5g042590 29.926 949 554 32 10 900 120 1015 2.53e-117 382
MS.gene016870.t1 MTR_2g059590 31.222 679 409 20 42 699 53 694 1.24e-93 311
MS.gene016870.t1 MTR_4g083610 30.346 781 453 22 113 857 194 919 5.05e-93 315
MS.gene016870.t1 MTR_2g028910 29.337 784 472 21 164 901 282 1029 5.47e-93 316
MS.gene016870.t1 MTR_7g107230 42.963 270 41 6 302 568 62 221 4.87e-49 174
MS.gene016870.t1 MTR_3g101730 34.637 179 73 4 628 802 34 172 6.31e-24 100
MS.gene016870.t1 MTR_5g099230 65.217 69 24 0 833 901 38 106 1.65e-22 94.7
MS.gene016870.t1 MTR_6g037320 54.054 74 34 0 588 661 1 74 4.90e-18 81.3
MS.gene016870.t1 MTR_1g038380 26.885 305 160 10 475 769 171 422 9.83e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene016870.t1 AT2G27040 69.438 890 251 5 25 900 41 923 0.0 1299
MS.gene016870.t1 AT2G27040 69.438 890 251 5 25 900 41 923 0.0 1299
MS.gene016870.t1 AT5G21150 67.189 893 271 9 16 900 17 895 0.0 1235
MS.gene016870.t1 AT5G21030 59.686 893 307 17 17 900 5 853 0.0 1023
MS.gene016870.t1 AT5G21030 59.686 893 303 18 17 900 5 849 0.0 1016
MS.gene016870.t1 AT2G32940 56.797 868 348 8 42 900 28 877 0.0 974
MS.gene016870.t1 AT2G27880 36.036 888 497 26 43 900 150 996 1.94e-155 483
MS.gene016870.t1 AT5G43810 34.149 899 509 23 43 900 131 987 1.39e-153 477
MS.gene016870.t1 AT5G43810 34.149 899 509 23 43 900 131 987 1.39e-153 477
MS.gene016870.t1 AT5G43810 34.149 899 509 23 43 900 131 987 1.39e-153 477
MS.gene016870.t1 AT5G43810 34.149 899 509 23 43 900 131 987 1.39e-153 477
MS.gene016870.t1 AT1G48410 33.650 948 526 27 12 900 144 1047 1.35e-151 474
MS.gene016870.t1 AT1G48410 33.614 949 527 27 12 900 144 1049 2.61e-151 473
MS.gene016870.t1 AT1G48410 33.614 949 527 27 12 900 144 1049 2.61e-151 473
MS.gene016870.t1 AT1G69440 29.966 891 528 31 47 900 158 989 9.20e-106 350
MS.gene016870.t1 AT1G31280 29.062 874 522 28 20 857 146 957 1.55e-95 323
MS.gene016870.t1 AT1G31290 29.465 879 503 28 31 859 254 1065 3.38e-92 316
MS.gene016870.t1 AT1G31290 29.465 879 503 28 31 859 292 1103 6.28e-92 315
MS.gene016870.t1 AT1G31290 29.465 879 503 28 31 859 328 1139 8.33e-92 316

Find 218 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAATTCCTACTCTCATTT+TGG 0.109073 5.2:+74534729 MS.gene016870:CDS
CTCAGTTGCATGCCCCTTTA+AGG 0.121508 5.2:-74531885 None:intergenic
CCAACATCATTGAACTTCTT+TGG 0.146276 5.2:-74532089 None:intergenic
ACATATGTTTCTGAGCTTAA+TGG 0.149777 5.2:+74531557 MS.gene016870:CDS
TTTCTTATCCTCTTCTTATC+AGG 0.174962 5.2:-74531788 None:intergenic
GGCCATTGCCGATGCCTTAA+AGG 0.196354 5.2:+74531871 MS.gene016870:CDS
AACTTGGAACCCCAAGTTTA+TGG 0.199752 5.2:+74535721 MS.gene016870:CDS
GGTCGTTGTGAAAGAAATTT+TGG 0.202097 5.2:-74532067 None:intergenic
ATCTTGTACTCTTGGTTAGA+TGG 0.234083 5.2:-74532518 None:intergenic
TTTGATGTCTTTGAAGAAAA+TGG 0.240022 5.2:+74534202 MS.gene016870:CDS
ATGCCCTATATTTAGATATC+AGG 0.258968 5.2:-74534949 None:intergenic
CAGACTCTCTTATGTAAGTT+TGG 0.260770 5.2:-74536845 None:intergenic
CCAGCGCCTTTCCCTTCAAC+AGG 0.272190 5.2:-74531506 None:intergenic
AACACATTATCACGTTCTTT+TGG 0.274464 5.2:+74536425 MS.gene016870:CDS
CAACATCATTGAACTTCTTT+GGG 0.281633 5.2:-74532088 None:intergenic
TTTCCACAAGGGAAGATCTT+TGG 0.296508 5.2:-74533200 None:intergenic
AGGAAGAACTCTGATCTTTA+TGG 0.298034 5.2:+74534331 MS.gene016870:CDS
ATCTTCATTGGTTTAACATT+AGG 0.301189 5.2:-74531214 None:intergenic
ATTTAAGAACCTCGATGATT+TGG 0.301451 5.2:-74535603 None:intergenic
TTTCAGTCTTGACTGGAATA+AGG 0.302768 5.2:+74532345 MS.gene016870:CDS
AGCTTCAAATCTACCTCAAT+TGG 0.309723 5.2:-74532864 None:intergenic
AGCTCCTGTTCTATCTTCAT+TGG 0.317522 5.2:-74531226 None:intergenic
AGAGTTATCAAGAAGCCATT+AGG 0.320188 5.2:+74531906 MS.gene016870:CDS
TGAGTTACACAGTTGATGTT+TGG 0.329487 5.2:+74533839 MS.gene016870:intron
AAGAAGAGAGGTTCTGTTCC+TGG 0.337519 5.2:+74532717 MS.gene016870:CDS
GCCATTGCCGATGCCTTAAA+GGG 0.342873 5.2:+74531872 MS.gene016870:CDS
GGCCCCTGATATCTAAATAT+AGG 0.349322 5.2:+74534945 MS.gene016870:CDS
TTGGAGTGTGGACAGGGCTT+TGG 0.350730 5.2:-74533181 None:intergenic
GCCCCTGATATCTAAATATA+GGG 0.356851 5.2:+74534946 MS.gene016870:CDS
GAGTTACACAGTTGATGTTT+GGG 0.363727 5.2:+74533840 MS.gene016870:intron
TAAAAGATGAAGGAATTATA+AGG 0.366493 5.2:+74535053 MS.gene016870:CDS
CACGCTAAGTCTAAACTTCC+TGG 0.370217 5.2:+74534274 MS.gene016870:CDS
TTGAAGAAAATGGTCAGTTT+AGG 0.370672 5.2:+74534212 MS.gene016870:CDS
TTACCAGGTGGCACATTGTC+TGG 0.370941 5.2:-74535794 None:intergenic
GGAACAATGGGAGGTGGTGG+GGG 0.372497 5.2:-74531190 None:intergenic
GGGATATATGTGGGTCGCTT+TGG 0.372711 5.2:-74532843 None:intergenic
GGTGGAACAATGGGAGGTGG+TGG 0.374637 5.2:-74531193 None:intergenic
GCAAAACATTTGTCAGATAC+TGG 0.376058 5.2:-74534527 None:intergenic
AACCAAGAGTACAAGATAAC+CGG 0.382850 5.2:+74532524 MS.gene016870:CDS
GCCCGGTTATCTTGTACTCT+TGG 0.382965 5.2:-74532526 None:intergenic
GTAAATTTCTTGATGAAACT+TGG 0.385377 5.2:+74535705 MS.gene016870:CDS
GGTGGTGTACTTGGATGTAA+TGG 0.387175 5.2:+74532113 MS.gene016870:CDS
CCAATGGCTAGGCGTGGCTT+AGG 0.388666 5.2:+74531277 MS.gene016870:CDS
TGGAACAATGGGAGGTGGTG+GGG 0.405915 5.2:-74531191 None:intergenic
GAGTTATCAAGAAGCCATTA+GGG 0.407158 5.2:+74531907 MS.gene016870:CDS
TCTGAGTTCACAAAAGTTGA+TGG 0.412334 5.2:+74533409 MS.gene016870:CDS
AAGAAGAATCTTGCGGAAGT+TGG 0.413709 5.2:+74534465 MS.gene016870:CDS
AGAAGCCACAAGAGCGGATG+AGG 0.415926 5.2:+74533232 MS.gene016870:CDS
ACTTTGAGTGGTTCTGAAGC+TGG 0.416494 5.2:-74532144 None:intergenic
GCAAGATTCTTCTTCTTCCA+TGG 0.420877 5.2:-74534456 None:intergenic
GGTGGGATGAATTCGCAGTT+AGG 0.423020 5.2:+74534673 MS.gene016870:CDS
TATCCTCTTCTTATCAGGGC+TGG 0.425563 5.2:-74531783 None:intergenic
GATAATATCAAGAACCCTAA+TGG 0.425665 5.2:-74531921 None:intergenic
TCTTGTACTCTTGGTTAGAT+GGG 0.431925 5.2:-74532517 None:intergenic
GGCAACAATTACCATAAACT+TGG 0.437861 5.2:-74535732 None:intergenic
GTTCAAGCCAGTGTCTGATA+AGG 0.438950 5.2:+74535015 MS.gene016870:CDS
TTGAAGATGTCACTTCAAAC+AGG 0.440092 5.2:+74531663 MS.gene016870:CDS
TCCAATCTGCTATGCACACT+TGG 0.440194 5.2:+74536727 MS.gene016870:CDS
AAAGGACTCTGAAGAATTTG+AGG 0.442534 5.2:+74532483 MS.gene016870:CDS
TTCTTATCCTCTTCTTATCA+GGG 0.445838 5.2:-74531787 None:intergenic
GATGTTTCTCATGGTTCACC+TGG 0.446031 5.2:+74534757 MS.gene016870:CDS
TTTATTACCGCAGCAATTGA+AGG 0.447881 5.2:-74534793 None:intergenic
TGCTTCGAAAATTCCTCTGC+AGG 0.449230 5.2:+74531850 MS.gene016870:CDS
AAGTTCCACCTCCCATTCCT+AGG 0.450697 5.2:-74533881 None:intergenic
GCGTTGAAAACAAGCGACTA+TGG 0.451046 5.2:+74533346 MS.gene016870:CDS
GTGGTGTACTTGGATGTAAT+GGG 0.455828 5.2:+74532114 MS.gene016870:CDS
CTCAGTGCATAGCTCCTACC+AGG 0.456685 5.2:+74534496 MS.gene016870:CDS
AAGATCTTTGGAGTGTGGAC+AGG 0.461294 5.2:-74533188 None:intergenic
GAGATCCTTTCAGTCTTGAC+TGG 0.466546 5.2:+74532338 MS.gene016870:CDS
CCTGTTGAAGGGAAAGGCGC+TGG 0.466871 5.2:+74531506 MS.gene016870:CDS
GGGCTTTGGTATAGCGTTGA+AGG 0.467408 5.2:-74533167 None:intergenic
TTCATTGGTTTAACATTAGG+TGG 0.470116 5.2:-74531211 None:intergenic
CTAGCCATTGGAGTCTTAGT+AGG 0.475521 5.2:-74531265 None:intergenic
GATGTTGGAGGTGGTGTACT+TGG 0.475773 5.2:+74532104 MS.gene016870:CDS
TGCCCTATATTTAGATATCA+GGG 0.478254 5.2:-74534948 None:intergenic
CAACCTTCGAACCCTGAGTT+CGG 0.479693 5.2:-74534976 None:intergenic
TTGGGCATGGATGTTTCTCA+TGG 0.483692 5.2:+74534748 MS.gene016870:CDS
GAAGATGGACGCCCTGTTGA+AGG 0.484566 5.2:+74531494 MS.gene016870:CDS
ACAAGCTCCTGTAAATCATC+TGG 0.485756 5.2:-74536465 None:intergenic
ATCTGCCATGTATTAATGTC+GGG 0.486469 5.2:+74532817 MS.gene016870:CDS
GAGGTGGAACTTCAATAATA+AGG 0.488802 5.2:+74533892 MS.gene016870:CDS
AATTTACTTGTGAAGGTCCA+TGG 0.491422 5.2:+74534439 MS.gene016870:intron
CCAAAGAAGTTCAATGATGT+TGG 0.492529 5.2:+74532089 MS.gene016870:CDS
GCTTCAAATCTACCTCAATT+GGG 0.494446 5.2:-74532863 None:intergenic
AGATCAGAGTTCTTCCTCTC+AGG 0.495404 5.2:-74534325 None:intergenic
GCAACAATTACCATAAACTT+GGG 0.495904 5.2:-74535731 None:intergenic
GCCAAGTGTGCATAGCAGAT+TGG 0.500157 5.2:-74536728 None:intergenic
TAAACCAATGAAGATAGAAC+AGG 0.501410 5.2:+74531222 MS.gene016870:CDS
AGTAGAAACTCAGGTGGCCC+AGG 0.503206 5.2:-74534292 None:intergenic
TCATGTTCCTTATCAGACAC+TGG 0.503274 5.2:-74535022 None:intergenic
TAGGGCATGTGTCCGAACTC+AGG 0.503580 5.2:+74534964 MS.gene016870:CDS
TACCTCAATTGGGATATATG+TGG 0.504356 5.2:-74532853 None:intergenic
TGCATGCCCCTTTAAGGCAT+CGG 0.509226 5.2:-74531879 None:intergenic
CAATGGCTAGGCGTGGCTTA+GGG 0.510534 5.2:+74531278 MS.gene016870:CDS
CACTTGGCTGCATCTCAAGT+TGG 0.513194 5.2:+74536743 MS.gene016870:CDS
GAAGATTTCAATCCTAGGAA+TGG 0.513396 5.2:+74533869 MS.gene016870:CDS
CCCCTTTAAGGCATCGGCAA+TGG 0.513532 5.2:-74531873 None:intergenic
CCTAAGCCACGCCTAGCCAT+TGG 0.513589 5.2:-74531277 None:intergenic
AGTGGATTGTCTCTGAACAT+AGG 0.513605 5.2:+74532164 MS.gene016870:CDS
CTGAAAATGATGATATTGTC+CGG 0.514879 5.2:-74535436 None:intergenic
GAAGGAATTATAAAAGATGA+AGG 0.515056 5.2:+74535043 MS.gene016870:CDS
ACAACCATGATTGTACGTCC+TGG 0.516929 5.2:+74532277 MS.gene016870:CDS
AAGATTTCAATCCTAGGAAT+GGG 0.519243 5.2:+74533870 MS.gene016870:CDS
CATTGTCTGGAGATCGAGGT+TGG 0.519763 5.2:-74535781 None:intergenic
TTAACATTAGGTGGAACAAT+GGG 0.521386 5.2:-74531202 None:intergenic
CAGAGACAATCCACTTTGAG+TGG 0.522358 5.2:-74532156 None:intergenic
AGCTTCAGAACCACTCAAAG+TGG 0.523148 5.2:+74532146 MS.gene016870:CDS
AGGAAGTCAACCACAGGCCC+AGG 0.524060 5.2:-74532295 None:intergenic
TCCTCAGTATCATCTTCTCC+AGG 0.525003 5.2:-74532735 None:intergenic
TATGTAAGTTTGGCAACTGT+GGG 0.525059 5.2:-74536835 None:intergenic
AAGACCCTCATCCGCTCTTG+TGG 0.527495 5.2:-74533237 None:intergenic
ACAGCAAAATTTGTCATCCT+AGG 0.529186 5.2:+74535916 MS.gene016870:CDS
AGCAGACAAAGTAGAAACTC+AGG 0.530875 5.2:-74534301 None:intergenic
GTGGAACAATGGGAGGTGGT+GGG 0.531726 5.2:-74531192 None:intergenic
ATAAAATGTGGAAGAATGAA+AGG 0.536134 5.2:+74534083 MS.gene016870:CDS
GCACGGAAATTCGCTCAGCC+CGG 0.542397 5.2:-74532543 None:intergenic
TGAGTTCAATGTTCAAAACT+TGG 0.545112 5.2:-74535579 None:intergenic
GTTCACAAAAGTTGATGGAA+GGG 0.546135 5.2:+74533414 MS.gene016870:CDS
CAACCATGATTGTACGTCCT+GGG 0.546323 5.2:+74532278 MS.gene016870:CDS
CTTCCCTTGTGGAAAAGTCT+AGG 0.546591 5.2:+74533208 MS.gene016870:CDS
TAGGCGTGGCTTAGGGACGA+AGG 0.548886 5.2:+74531285 MS.gene016870:CDS
GGACGCCCTGTTGAAGGGAA+AGG 0.552595 5.2:+74531500 MS.gene016870:CDS
ATGGCGAAGATTTCAATCCT+AGG 0.553081 5.2:+74533864 MS.gene016870:CDS
AAGATGGACGCCCTGTTGAA+GGG 0.553402 5.2:+74531495 MS.gene016870:CDS
AGTTCACAAAAGTTGATGGA+AGG 0.555611 5.2:+74533413 MS.gene016870:CDS
ACACAGTTGATGTTTGGGAA+TGG 0.558811 5.2:+74533845 MS.gene016870:intron
AGAGCGGATGAGGGTCTTGT+CGG 0.559054 5.2:+74533242 MS.gene016870:CDS
GAGAAGACTCTGTTCACAAT+CGG 0.560053 5.2:+74531602 MS.gene016870:CDS
ACGCTAAGTCTAAACTTCCT+GGG 0.560741 5.2:+74534275 MS.gene016870:CDS
ACCTCAATTGGGATATATGT+GGG 0.560837 5.2:-74532852 None:intergenic
AGATCTTTGGAGTGTGGACA+GGG 0.562024 5.2:-74533187 None:intergenic
GGAAAAGACCTTGCTTATGA+CGG 0.562480 5.2:+74531578 MS.gene016870:CDS
GGCTTCCCGACATTAATACA+TGG 0.563279 5.2:-74532822 None:intergenic
CTGTTGAAGGGAAAGGCGCT+GGG 0.563656 5.2:+74531507 MS.gene016870:CDS
TTATGTAAGTTTGGCAACTG+TGG 0.564381 5.2:-74536836 None:intergenic
AGGGCATGTGTCCGAACTCA+GGG 0.564985 5.2:+74534965 MS.gene016870:CDS
TGAATGTTGCTAACACAGAT+GGG 0.567590 5.2:+74531344 MS.gene016870:CDS
AATTACAGCTGGTCTTTGCA+CGG 0.569959 5.2:-74532560 None:intergenic
TCAAAGTGATTTGTTAACAA+AGG 0.572097 5.2:-74531319 None:intergenic
TTTAACATTAGGTGGAACAA+TGG 0.572957 5.2:-74531203 None:intergenic
GATCTGCCATGTATTAATGT+CGG 0.578286 5.2:+74532816 MS.gene016870:CDS
GGCTTTGGTATAGCGTTGAA+GGG 0.578616 5.2:-74533166 None:intergenic
GTTTAGGCGTGCACCGCCTG+TGG 0.579359 5.2:+74534228 MS.gene016870:CDS
AGGCCCAGGACGTACAATCA+TGG 0.579593 5.2:-74532281 None:intergenic
TCTCCAGACAATGTGCCACC+TGG 0.581107 5.2:+74535791 MS.gene016870:CDS
TTCTCAACTCTGACCACAGG+CGG 0.583005 5.2:-74534241 None:intergenic
AAGAAGTTCAATGATGTTGG+AGG 0.583327 5.2:+74532092 MS.gene016870:CDS
TTATTCCAGTCAAGACTGAA+AGG 0.584520 5.2:-74532343 None:intergenic
AGTTTGGCAACTGTGGGATG+AGG 0.584759 5.2:-74536829 None:intergenic
TCTGTTCTCAGGGTACAAGC+AGG 0.585537 5.2:+74536400 MS.gene016870:intron
CTACTAAGACTCCAATGGCT+AGG 0.585767 5.2:+74531266 MS.gene016870:CDS
TTTGCTGAAGATCAATGCTA+AGG 0.585973 5.2:+74534545 MS.gene016870:CDS
TACTTTGTCTGCTTCCTGAG+AGG 0.586786 5.2:+74534311 MS.gene016870:CDS
AAAAGAACGTGATAATGTGT+TGG 0.587237 5.2:-74536423 None:intergenic
TCCATGCCCAAAATGAGAGT+AGG 0.588727 5.2:-74534736 None:intergenic
ACCCACATATATCCCAATTG+AGG 0.591113 5.2:+74532851 MS.gene016870:CDS
CAGCGCCTTTCCCTTCAACA+GGG 0.591713 5.2:-74531505 None:intergenic
TGGTATTGCAGGAACTGTTG+TGG 0.591832 5.2:+74535893 MS.gene016870:intron
ATATTGTTTCCAGAAAATTG+TGG 0.594790 5.2:+74533983 MS.gene016870:intron
AGCACCACTGCTATTTCTGT+CGG 0.595497 5.2:+74536618 MS.gene016870:CDS
TGTCCGAACTCAGGGTTCGA+AGG 0.595831 5.2:+74534973 MS.gene016870:CDS
GTGAATGTTGCTAACACAGA+TGG 0.596476 5.2:+74531343 MS.gene016870:CDS
GTTTGGCAACTGTGGGATGA+GGG 0.597169 5.2:-74536828 None:intergenic
TCTGAAGAATTTGAGGATCA+CGG 0.600179 5.2:+74532490 MS.gene016870:CDS
CAGATACTGGTCATTAACCC+TGG 0.602238 5.2:-74534514 None:intergenic
TTAGGTGGAACAATGGGAGG+TGG 0.602555 5.2:-74531196 None:intergenic
GAAGGAATGTCAGATTGCCC+AGG 0.602653 5.2:-74534775 None:intergenic
TCTGAAACTTCCTCGAGCCA+AGG 0.603304 5.2:+74536791 MS.gene016870:CDS
TCAATCCTAGGAATGGGAGG+TGG 0.604675 5.2:+74533876 MS.gene016870:CDS
ACACCAGCCCTGATAAGAAG+AGG 0.605422 5.2:+74531780 MS.gene016870:CDS
AGGTTGTTAGCTCGAGGCAA+TGG 0.606988 5.2:+74534924 MS.gene016870:intron
TCTTCTCGCCGTCATAAGCA+AGG 0.608245 5.2:-74531586 None:intergenic
AGGTTTACTCTGAAGAAGAG+AGG 0.609371 5.2:+74532705 MS.gene016870:intron
TGACATTCCTTCAATTGCTG+CGG 0.612470 5.2:+74534786 MS.gene016870:CDS
TAGTTCTGAGGAAAGACGAC+CGG 0.615391 5.2:+74535417 MS.gene016870:CDS
ATTCAGAATATGAGTTCACA+AGG 0.617684 5.2:+74531151 None:intergenic
GGCACATTGTCTGGAGATCG+AGG 0.617706 5.2:-74535785 None:intergenic
ACATTAGGTGGAACAATGGG+AGG 0.620734 5.2:-74531199 None:intergenic
TCTTCAAAGACATCAAAAGG+TGG 0.623654 5.2:-74534196 None:intergenic
GATTGTACGTCCTGGGCCTG+TGG 0.625876 5.2:+74532285 MS.gene016870:CDS
TCTGCACGCTGTGATGTGCG+AGG 0.626472 5.2:+74534044 MS.gene016870:CDS
GCTTCCTACTAAGACTCCAA+TGG 0.626834 5.2:+74531261 MS.gene016870:CDS
GCAATTAGGAAGTCAACCAC+AGG 0.628616 5.2:-74532301 None:intergenic
ACTCCAAAGATCTTCCCTTG+TGG 0.628844 5.2:+74533197 MS.gene016870:CDS
AAGGGAAGATCTTTGGAGTG+TGG 0.631222 5.2:-74533193 None:intergenic
GTGTCTGATAAGGAACATGA+AGG 0.631854 5.2:+74535025 MS.gene016870:CDS
ATATGTAGGTTGTTAGCTCG+AGG 0.632028 5.2:+74534918 MS.gene016870:intron
AAGTTCAATGATGTTGGAGG+TGG 0.633799 5.2:+74532095 MS.gene016870:CDS
GCATCGGCAATGGCCTGCAG+AGG 0.634030 5.2:-74531863 None:intergenic
CAACAATTACCATAAACTTG+GGG 0.635830 5.2:-74535730 None:intergenic
CAACTTTATAAGTCTTCGAG+CGG 0.636751 5.2:-74531817 None:intergenic
ACCAAGAGTACAAGATAACC+GGG 0.637792 5.2:+74532525 MS.gene016870:CDS
TATGAGTTCACAAGGACACA+AGG 0.637843 5.2:+74531159 None:intergenic
ATTGACACCACCTTGGCTCG+AGG 0.637884 5.2:-74536801 None:intergenic
GGGAGGCATTGACACCACCT+TGG 0.642435 5.2:-74536808 None:intergenic
TCCTGGAGAAGATGATACTG+AGG 0.643602 5.2:+74532734 MS.gene016870:CDS
CTAGGCAGAAGCCACAAGAG+CGG 0.652116 5.2:+74533226 MS.gene016870:CDS
ATTTCAATCCTAGGAATGGG+AGG 0.654959 5.2:+74533873 MS.gene016870:CDS
GAGCGAATGCTACGTAACTG+TGG 0.659030 5.2:+74533373 MS.gene016870:CDS
GAAACTTCCTCGAGCCAAGG+TGG 0.662364 5.2:+74536794 MS.gene016870:CDS
ATGGAAGAAGAAGAATCTTG+CGG 0.662730 5.2:+74534458 MS.gene016870:CDS
ATGTTTCTCATGGTTCACCT+GGG 0.664179 5.2:+74534758 MS.gene016870:CDS
GAAGCCACAAGAGCGGATGA+GGG 0.664428 5.2:+74533233 MS.gene016870:CDS
TGGCAACTGTGGGATGAGGG+AGG 0.664690 5.2:-74536825 None:intergenic
TGATGTGCGAGGACTTGTGA+GGG 0.666371 5.2:+74534055 MS.gene016870:CDS
AGGCGTGGCTTAGGGACGAA+GGG 0.667402 5.2:+74531286 MS.gene016870:CDS
CCATTGCCGATGCCTTAAAG+GGG 0.668294 5.2:+74531873 MS.gene016870:CDS
AAGACTCCAATGGCTAGGCG+TGG 0.674690 5.2:+74531271 MS.gene016870:CDS
GTGATGTGCGAGGACTTGTG+AGG 0.675054 5.2:+74534054 MS.gene016870:CDS
GTGAGGGATCTGATAAAATG+TGG 0.676503 5.2:+74534071 MS.gene016870:CDS
GCCCTATATTTAGATATCAG+GGG 0.682408 5.2:-74534947 None:intergenic
TTGAAGGGAAAGGCGCTGGG+AGG 0.682795 5.2:+74531510 MS.gene016870:CDS
TACTGGTCATTAACCCTGGT+AGG 0.692148 5.2:-74534510 None:intergenic
AGACAAAGTAGAAACTCAGG+TGG 0.699917 5.2:-74534298 None:intergenic
TGTATGACAACAGTTATCAG+CGG 0.706525 5.2:+74536595 MS.gene016870:intron
TCAGTGCATAGCTCCTACCA+GGG 0.714408 5.2:+74534497 MS.gene016870:CDS
TGAACTCAGCCAAATCATCG+AGG 0.745228 5.2:+74535594 MS.gene016870:CDS
CTTACCGACAGAAATAGCAG+TGG 0.760890 5.2:-74536622 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATATATAAAAAAA+TGG - chr5.2:74535848-74535867 None:intergenic 0.0%
!! ATAAAAAAACATTTAGATAA+TGG - chr5.2:74534877-74534896 None:intergenic 10.0%
!! CTTTCTTAATAAAAATTAAT+TGG + chr5.2:74534415-74534434 MS.gene016870:intron 10.0%
!! TTATAATTAATGTTATTGTA+GGG + chr5.2:74535531-74535550 MS.gene016870:intron 10.0%
!!! TATTGTTTTTTTTTTTTTTG+GGG + chr5.2:74535649-74535668 MS.gene016870:intron 10.0%
!! ATAATATTAAAAGAAACCAA+AGG - chr5.2:74534584-74534603 None:intergenic 15.0%
!! ATATAAAAATCATAATTCCT+AGG - chr5.2:74535936-74535955 None:intergenic 15.0%
!! ATTACAGATTATTATCATAA+TGG - chr5.2:74536320-74536339 None:intergenic 15.0%
!! CTTATAATTAATGTTATTGT+AGG + chr5.2:74535530-74535549 MS.gene016870:intron 15.0%
!! TAACAAATGCATTAAAAAAA+AGG - chr5.2:74534390-74534409 None:intergenic 15.0%
!!! ATTGTTTTTTTTTTTTTTGG+GGG + chr5.2:74535650-74535669 MS.gene016870:intron 15.0%
!!! TTAATTTTTTGATGTAGATT+AGG + chr5.2:74532986-74533005 MS.gene016870:intron 15.0%
!!! TTTTTAATGCATTTGTTAAA+TGG + chr5.2:74534392-74534411 MS.gene016870:intron 15.0%
!! AAAAAAAGGTAAATAGAACA+TGG - chr5.2:74534376-74534395 None:intergenic 20.0%
!! AACCTGTTAAAATAAAAAAC+TGG + chr5.2:74534006-74534025 MS.gene016870:CDS 20.0%
!! AATAATTTCAAGGAAAAACT+TGG - chr5.2:74535097-74535116 None:intergenic 20.0%
!! AATAGATAATACACATTATG+AGG - chr5.2:74532910-74532929 None:intergenic 20.0%
!! AATTTCTTCCAAAAGTAATT+TGG - chr5.2:74533703-74533722 None:intergenic 20.0%
!! ACCTGTTAAAATAAAAAACT+GGG + chr5.2:74534007-74534026 MS.gene016870:CDS 20.0%
!! ATGAGTATAACAAAAAGTTA+AGG - chr5.2:74532409-74532428 None:intergenic 20.0%
!! ATTACACAATCAACTTAAAA+TGG - chr5.2:74532594-74532613 None:intergenic 20.0%
!! CTACACAATAAAATATACAA+GGG - chr5.2:74532459-74532478 None:intergenic 20.0%
!! CTTATGTGTAAGTTTATATT+TGG + chr5.2:74536499-74536518 MS.gene016870:intron 20.0%
!! TAAAAGATGAAGGAATTATA+AGG + chr5.2:74535053-74535072 MS.gene016870:CDS 20.0%
!! TAATTATAACCATGTAAATC+AGG - chr5.2:74536229-74536248 None:intergenic 20.0%
!! TCATAATGTGTATTATCTAT+TGG + chr5.2:74532909-74532928 MS.gene016870:intron 20.0%
!! TCATTTAGAGATCTATAAAT+TGG + chr5.2:74532955-74532974 MS.gene016870:intron 20.0%
!! TTACACAATCAACTTAAAAT+GGG - chr5.2:74532593-74532612 None:intergenic 20.0%
!!! AATATTATTTGCTGATTTAC+AGG + chr5.2:74533324-74533343 MS.gene016870:intron 20.0%
!!! AGTTGATGGTTTATTTATTT+TGG + chr5.2:74535348-74535367 MS.gene016870:intron 20.0%
!!! ATCTAAATCTTTCAAGTTTT+AGG + chr5.2:74535679-74535698 MS.gene016870:intron 20.0%
!!! ATGTTTTGTATTTCATGATT+CGG + chr5.2:74531387-74531406 MS.gene016870:intron 20.0%
!!! GATTTTGATAAATAAGTACA+AGG - chr5.2:74536382-74536401 None:intergenic 20.0%
!!! GTTGATGGTTTATTTATTTT+GGG + chr5.2:74535349-74535368 MS.gene016870:intron 20.0%
!!! TATTTAACTTTGCCTTTTAT+AGG + chr5.2:74531747-74531766 MS.gene016870:intron 20.0%
!!! TTCATTTTAGTTATATGTCT+GGG + chr5.2:74536101-74536120 MS.gene016870:intron 20.0%
!!! TTGTTTTTTTTTTTTTTGGG+GGG + chr5.2:74535651-74535670 MS.gene016870:intron 20.0%
!!! TTTTTCCTTGAAATTATTTC+AGG + chr5.2:74535099-74535118 MS.gene016870:intron 20.0%
!!! TTTTTCTAGCAATATTTTGA+AGG - chr5.2:74533559-74533578 None:intergenic 20.0%
! AATAAAATATACAAGGGATC+AGG - chr5.2:74532453-74532472 None:intergenic 25.0%
! AATTAATGTTATTGTAGGGA+TGG + chr5.2:74535535-74535554 MS.gene016870:intron 25.0%
! AATTGGAAATTTACTTGTGA+AGG + chr5.2:74534432-74534451 MS.gene016870:intron 25.0%
! ACAAGGAAACAAAACAAATA+AGG - chr5.2:74533490-74533509 None:intergenic 25.0%
! ATAAAATGTGGAAGAATGAA+AGG + chr5.2:74534083-74534102 MS.gene016870:CDS 25.0%
! ATATAATTTACCTAGTCTCT+CGG + chr5.2:74532932-74532951 MS.gene016870:intron 25.0%
! ATATTGTTTCCAGAAAATTG+TGG + chr5.2:74533983-74534002 MS.gene016870:intron 25.0%
! ATCTTTGTAATATCAATCAC+AGG + chr5.2:74532027-74532046 MS.gene016870:intron 25.0%
! ATGTAAATGTCTACATATGT+AGG + chr5.2:74534904-74534923 MS.gene016870:intron 25.0%
! ATTTACTGACATGCATAAAA+AGG + chr5.2:74534129-74534148 MS.gene016870:intron 25.0%
! ATTTATCAAAATCTGTTCTC+AGG + chr5.2:74536389-74536408 MS.gene016870:intron 25.0%
! CAACAATATAACTATCAAAC+AGG - chr5.2:74533734-74533753 None:intergenic 25.0%
! CCTACACAATAAAATATACA+AGG - chr5.2:74532460-74532479 None:intergenic 25.0%
! CGAAAATAGTTATCAAGTAT+TGG - chr5.2:74533108-74533127 None:intergenic 25.0%
! GAAGGAATTATAAAAGATGA+AGG + chr5.2:74535043-74535062 MS.gene016870:CDS 25.0%
! GACATATAACTAAAATGAAG+AGG - chr5.2:74536100-74536119 None:intergenic 25.0%
! GTAAATTTCTTGATGAAACT+TGG + chr5.2:74535705-74535724 MS.gene016870:CDS 25.0%
! TAATCATCAAGAGAAGTTAA+GGG - chr5.2:74533680-74533699 None:intergenic 25.0%
! TAGAACATGGAAATATATCA+AGG - chr5.2:74534363-74534382 None:intergenic 25.0%
! TCTAATATTCAAAGATCGAT+TGG + chr5.2:74535163-74535182 MS.gene016870:intron 25.0%
! TCTTTGTAATATCAATCACA+GGG + chr5.2:74532028-74532047 MS.gene016870:intron 25.0%
! TTTATCAAAATCTGTTCTCA+GGG + chr5.2:74536390-74536409 MS.gene016870:intron 25.0%
! TTTATGACTTTCTTAATGTC+TGG + chr5.2:74532617-74532636 MS.gene016870:intron 25.0%
!! AAAATTCCTACTCTCATTTT+GGG + chr5.2:74534730-74534749 MS.gene016870:CDS 25.0%
!! AAGATAATTTGAAGTCTTCA+AGG - chr5.2:74536291-74536310 None:intergenic 25.0%
!! ATTTTATTGTGTAGGCTAAA+AGG + chr5.2:74532465-74532484 MS.gene016870:intron 25.0%
!! ATTTTGTATGATGATTCTTC+TGG - chr5.2:74535757-74535776 None:intergenic 25.0%
!! CCTTGTATATTTTATTGTGT+AGG + chr5.2:74532457-74532476 MS.gene016870:intron 25.0%
!! CTTTAGAAAATATGTCTCTA+AGG + chr5.2:74534833-74534852 MS.gene016870:intron 25.0%
!! GAATATATGACCTTTTCATT+CGG + chr5.2:74536072-74536091 MS.gene016870:intron 25.0%
!! GATGATTACCAAATTACTTT+TGG + chr5.2:74533692-74533711 MS.gene016870:intron 25.0%
!! GATTTTATTCTTTTGTAGCT+TGG + chr5.2:74534652-74534671 MS.gene016870:intron 25.0%
!! TATTCTATTTCGTTTGCTTT+TGG + chr5.2:74534161-74534180 MS.gene016870:intron 25.0%
!! TTTGATGTCTTTGAAGAAAA+TGG + chr5.2:74534202-74534221 MS.gene016870:CDS 25.0%
!! TTTTCTTCAAAGACATCAAA+AGG - chr5.2:74534202-74534221 None:intergenic 25.0%
!! TTTTGTATGATGATTCTTCT+GGG - chr5.2:74535756-74535775 None:intergenic 25.0%
!!! ATCTTCATTGGTTTAACATT+AGG - chr5.2:74531217-74531236 None:intergenic 25.0%
!!! CTTCATTTTAGTTATATGTC+TGG + chr5.2:74536100-74536119 MS.gene016870:intron 25.0%
!!! GGTTTATTTATTTTGGGAAT+TGG + chr5.2:74535355-74535374 MS.gene016870:intron 25.0%
!!! TCAAAGTGATTTGTTAACAA+AGG - chr5.2:74531322-74531341 None:intergenic 25.0%
!!! TCATTTTAGTTATATGTCTG+GGG + chr5.2:74536102-74536121 MS.gene016870:intron 25.0%
!!! TGATTTTTTTCATAGTTCTG+AGG + chr5.2:74535405-74535424 MS.gene016870:CDS 25.0%
!!! TGTTTTTTTTTTTTTTGGGG+GGG + chr5.2:74535652-74535671 MS.gene016870:intron 25.0%
!!! TTGCTTTGAAATTATGTTTC+TGG + chr5.2:74536528-74536547 MS.gene016870:intron 25.0%
AAGATTTCAATCCTAGGAAT+GGG + chr5.2:74533870-74533889 MS.gene016870:CDS 30.0%
AATAACAGCGAATGAATTGA+GGG - chr5.2:74533516-74533535 None:intergenic 30.0%
AGGAACAATTAGCAAAACAA+AGG - chr5.2:74532389-74532408 None:intergenic 30.0%
AGGTATATTCATTCTTCCTT+TGG + chr5.2:74534565-74534584 MS.gene016870:intron 30.0%
AGTCAGTCGTTGAAAAAATT+AGG - chr5.2:74535199-74535218 None:intergenic 30.0%
ATGATAGAATGCAAGCAAAA+AGG - chr5.2:74536343-74536362 None:intergenic 30.0%
ATGCCCTATATTTAGATATC+AGG - chr5.2:74534952-74534971 None:intergenic 30.0%
ATGTCAAGCATTCAAAGAAA+TGG - chr5.2:74533634-74533653 None:intergenic 30.0%
ATTTAAGAACCTCGATGATT+TGG - chr5.2:74535606-74535625 None:intergenic 30.0%
CAACAATTACCATAAACTTG+GGG - chr5.2:74535733-74535752 None:intergenic 30.0%
CAACATCATTGAACTTCTTT+GGG - chr5.2:74532091-74532110 None:intergenic 30.0%
CTGAAAATGATGATATTGTC+CGG - chr5.2:74535439-74535458 None:intergenic 30.0%
CTTTGTAATATCAATCACAG+GGG + chr5.2:74532029-74532048 MS.gene016870:intron 30.0%
GATAATATCAAGAACCCTAA+TGG - chr5.2:74531924-74531943 None:intergenic 30.0%
GATGAGAATATAGACAACAA+AGG - chr5.2:74532203-74532222 None:intergenic 30.0%
GCAACAATTACCATAAACTT+GGG - chr5.2:74535734-74535753 None:intergenic 30.0%
GTAATCATCAAGAGAAGTTA+AGG - chr5.2:74533681-74533700 None:intergenic 30.0%
TAAAATAAAAAACTGGGCTG+TGG + chr5.2:74534013-74534032 MS.gene016870:CDS 30.0%
TAAACCAATGAAGATAGAAC+AGG + chr5.2:74531222-74531241 MS.gene016870:CDS 30.0%
TGAGTTCAATGTTCAAAACT+TGG - chr5.2:74535582-74535601 None:intergenic 30.0%
TGCCCTATATTTAGATATCA+GGG - chr5.2:74534951-74534970 None:intergenic 30.0%
TTAACATTAGGTGGAACAAT+GGG - chr5.2:74531205-74531224 None:intergenic 30.0%
TTCTTATCCTCTTCTTATCA+GGG - chr5.2:74531790-74531809 None:intergenic 30.0%
TTGAAGAAAATGGTCAGTTT+AGG + chr5.2:74534212-74534231 MS.gene016870:CDS 30.0%
TTTAACATTAGGTGGAACAA+TGG - chr5.2:74531206-74531225 None:intergenic 30.0%
TTTCTTATCCTCTTCTTATC+AGG - chr5.2:74531791-74531810 None:intergenic 30.0%
! AAAAGAACGTGATAATGTGT+TGG - chr5.2:74536426-74536445 None:intergenic 30.0%
! AACACATTATCACGTTCTTT+TGG + chr5.2:74536425-74536444 MS.gene016870:CDS 30.0%
! ACATATGTTTCTGAGCTTAA+TGG + chr5.2:74531557-74531576 MS.gene016870:CDS 30.0%
! GAAAATTCCTACTCTCATTT+TGG + chr5.2:74534729-74534748 MS.gene016870:CDS 30.0%
! GTTGTTATTAATGAAGATGC+CGG + chr5.2:74532676-74532695 MS.gene016870:intron 30.0%
! TAGAAAATATGTCTCTAAGG+TGG + chr5.2:74534836-74534855 MS.gene016870:intron 30.0%
! TAGGAATTTTCGACACAATA+GGG - chr5.2:74534720-74534739 None:intergenic 30.0%
! TGACTTTTCTGTGTGAAAAA+AGG + chr5.2:74535214-74535233 MS.gene016870:intron 30.0%
! TTATAGCAGTTTTCAGTTGA+TGG + chr5.2:74535334-74535353 MS.gene016870:intron 30.0%
! TTATTCTTTTGTAGCTTGGT+GGG + chr5.2:74534656-74534675 MS.gene016870:intron 30.0%
! TTTATTCTTTTGTAGCTTGG+TGG + chr5.2:74534655-74534674 MS.gene016870:intron 30.0%
!! TTCATTGGTTTAACATTAGG+TGG - chr5.2:74531214-74531233 None:intergenic 30.0%
!! TTTGAAATTGGTGTTGTTCA+TGG + chr5.2:74531708-74531727 MS.gene016870:intron 30.0%
!!! CATTACTCCAATCCTTTTTT+CGG + chr5.2:74536203-74536222 MS.gene016870:intron 30.0%
!!! CATTTTAGTTATATGTCTGG+GGG + chr5.2:74536103-74536122 MS.gene016870:intron 30.0%
!!! GCCCAGTTTTTTATTTTAAC+AGG - chr5.2:74534011-74534030 None:intergenic 30.0%
!!! GTTGCTTTGTTTTATGAAGA+TGG + chr5.2:74531479-74531498 MS.gene016870:CDS 30.0%
!!! TCTCTAAGGTGGTATTTTAT+GGG + chr5.2:74534847-74534866 MS.gene016870:intron 30.0%
!!! TGGATGTTGGTTTTTGAAAT+TGG + chr5.2:74531696-74531715 MS.gene016870:intron 30.0%
!!! TTTTACTTAGCTTTGCTCTT+TGG + chr5.2:74533140-74533159 MS.gene016870:intron 30.0%
AAGAAGTTCAATGATGTTGG+AGG + chr5.2:74532092-74532111 MS.gene016870:CDS 35.0%
AATTTACTTGTGAAGGTCCA+TGG + chr5.2:74534439-74534458 MS.gene016870:intron 35.0%
ACAGCAAAATTTGTCATCCT+AGG + chr5.2:74535916-74535935 MS.gene016870:CDS 35.0%
ACCTCAATTGGGATATATGT+GGG - chr5.2:74532855-74532874 None:intergenic 35.0%
AGAAAACGATGGCAGAAAAT+TGG - chr5.2:74535476-74535495 None:intergenic 35.0%
AGAGTTATCAAGAAGCCATT+AGG + chr5.2:74531906-74531925 MS.gene016870:CDS 35.0%
AGCAAAATTTCCCTGCATAT+CGG - chr5.2:74535385-74535404 None:intergenic 35.0%
AGCTTCAAATCTACCTCAAT+TGG - chr5.2:74532867-74532886 None:intergenic 35.0%
AGGAAGAACTCTGATCTTTA+TGG + chr5.2:74534331-74534350 MS.gene016870:CDS 35.0%
ATCGACGTGCAATAAAACAT+CGG - chr5.2:74535139-74535158 None:intergenic 35.0%
ATCTGCCATGTATTAATGTC+GGG + chr5.2:74532817-74532836 MS.gene016870:CDS 35.0%
ATCTTGTACTCTTGGTTAGA+TGG - chr5.2:74532521-74532540 None:intergenic 35.0%
ATGGAAGAAGAAGAATCTTG+CGG + chr5.2:74534458-74534477 MS.gene016870:CDS 35.0%
ATGTAAATCAGGCCGAAAAA+AGG - chr5.2:74536218-74536237 None:intergenic 35.0%
CAACAAGTAGAAGAAAACGA+TGG - chr5.2:74535487-74535506 None:intergenic 35.0%
CAACTTTATAAGTCTTCGAG+CGG - chr5.2:74531820-74531839 None:intergenic 35.0%
CAATAACAGCGAATGAATTG+AGG - chr5.2:74533517-74533536 None:intergenic 35.0%
CAGACTCTCTTATGTAAGTT+TGG - chr5.2:74536848-74536867 None:intergenic 35.0%
CCAAAGAAGTTCAATGATGT+TGG + chr5.2:74532089-74532108 MS.gene016870:CDS 35.0%
CCAACATCATTGAACTTCTT+TGG - chr5.2:74532092-74532111 None:intergenic 35.0%
CTCATACAATGTATTTGTGC+AGG + chr5.2:74531457-74531476 MS.gene016870:intron 35.0%
GAAAACGATGGCAGAAAATT+GGG - chr5.2:74535475-74535494 None:intergenic 35.0%
GAAGATTTCAATCCTAGGAA+TGG + chr5.2:74533869-74533888 MS.gene016870:CDS 35.0%
GAATTTAACACAGACTGCAT+TGG - chr5.2:74536143-74536162 None:intergenic 35.0%
GAGGTGGAACTTCAATAATA+AGG + chr5.2:74533892-74533911 MS.gene016870:CDS 35.0%
GAGTTATCAAGAAGCCATTA+GGG + chr5.2:74531907-74531926 MS.gene016870:CDS 35.0%
GATCTGCCATGTATTAATGT+CGG + chr5.2:74532816-74532835 MS.gene016870:CDS 35.0%
GCAAAACATTTGTCAGATAC+TGG - chr5.2:74534530-74534549 None:intergenic 35.0%
GCCCCTGATATCTAAATATA+GGG + chr5.2:74534946-74534965 MS.gene016870:CDS 35.0%
GCCCTATATTTAGATATCAG+GGG - chr5.2:74534950-74534969 None:intergenic 35.0%
GCTTCAAATCTACCTCAATT+GGG - chr5.2:74532866-74532885 None:intergenic 35.0%
GGCAACAATTACCATAAACT+TGG - chr5.2:74535735-74535754 None:intergenic 35.0%
GTCGTCCTGAAATAATTTCA+AGG - chr5.2:74535107-74535126 None:intergenic 35.0%
GTTCGCATTGTTCCTATAAA+AGG - chr5.2:74531762-74531781 None:intergenic 35.0%
TACCTCAATTGGGATATATG+TGG - chr5.2:74532856-74532875 None:intergenic 35.0%
TATGTAAGTTTGGCAACTGT+GGG - chr5.2:74536838-74536857 None:intergenic 35.0%
TCAGAGTAAACCTACAATAC+CGG - chr5.2:74532698-74532717 None:intergenic 35.0%
TCTGAAGAATTTGAGGATCA+CGG + chr5.2:74532490-74532509 MS.gene016870:CDS 35.0%
TCTGAGTTCACAAAAGTTGA+TGG + chr5.2:74533409-74533428 MS.gene016870:CDS 35.0%
TCTTCAAAGACATCAAAAGG+TGG - chr5.2:74534199-74534218 None:intergenic 35.0%
TCTTGTACTCTTGGTTAGAT+GGG - chr5.2:74532520-74532539 None:intergenic 35.0%
TGAATGTTGCTAACACAGAT+GGG + chr5.2:74531344-74531363 MS.gene016870:CDS 35.0%
TGAGTACGAAAGGAAAATAC+TGG - chr5.2:74534624-74534643 None:intergenic 35.0%
TGATAAAAGAGCAATACCCT+TGG - chr5.2:74533451-74533470 None:intergenic 35.0%
TGGGATAGAAAAATTACAGC+TGG - chr5.2:74532574-74532593 None:intergenic 35.0%
TGTATGACAACAGTTATCAG+CGG + chr5.2:74536595-74536614 MS.gene016870:intron 35.0%
TTATGTAAGTTTGGCAACTG+TGG - chr5.2:74536839-74536858 None:intergenic 35.0%
TTATTCCAGTCAAGACTGAA+AGG - chr5.2:74532346-74532365 None:intergenic 35.0%
TTCAAAACAAGCTGATTACC+AGG - chr5.2:74535812-74535831 None:intergenic 35.0%
TTTATTACCGCAGCAATTGA+AGG - chr5.2:74534796-74534815 None:intergenic 35.0%
TTTCAGTCTTGACTGGAATA+AGG + chr5.2:74532345-74532364 MS.gene016870:CDS 35.0%
TTTGCTGAAGATCAATGCTA+AGG + chr5.2:74534545-74534564 MS.gene016870:CDS 35.0%
! AAAGGACTCTGAAGAATTTG+AGG + chr5.2:74532483-74532502 MS.gene016870:CDS 35.0%
! AACCAAGAGTACAAGATAAC+CGG + chr5.2:74532524-74532543 MS.gene016870:CDS 35.0%
! AATTTTCGACACAATAGGGA+TGG - chr5.2:74534716-74534735 None:intergenic 35.0%
! ATGTCTAGCTAACCTCTTTT+TGG + chr5.2:74535873-74535892 MS.gene016870:intron 35.0%
! CATCGTTTTCTTCTACTTGT+TGG + chr5.2:74535485-74535504 MS.gene016870:intron 35.0%
! CTGAGCAATACTTTTGTTGA+TGG + chr5.2:74533929-74533948 MS.gene016870:intron 35.0%
! CTTTTCTCCAGATGATTTAC+AGG + chr5.2:74536458-74536477 MS.gene016870:CDS 35.0%
! GAGTTACACAGTTGATGTTT+GGG + chr5.2:74533840-74533859 MS.gene016870:intron 35.0%
! GGTCGTTGTGAAAGAAATTT+TGG - chr5.2:74532070-74532089 None:intergenic 35.0%
! GTAGGAATTTTCGACACAAT+AGG - chr5.2:74534721-74534740 None:intergenic 35.0%
! TAACAGGTTCCACAATTTTC+TGG - chr5.2:74533995-74534014 None:intergenic 35.0%
! TGAGTTACACAGTTGATGTT+TGG + chr5.2:74533839-74533858 MS.gene016870:intron 35.0%
! TTGAAGATGTCACTTCAAAC+AGG + chr5.2:74531663-74531682 MS.gene016870:CDS 35.0%
! TTTCCTATACTTGCTACTGA+TGG + chr5.2:74533792-74533811 MS.gene016870:intron 35.0%
! TTTTATATGTGTGCTCATGC+TGG + chr5.2:74535948-74535967 MS.gene016870:CDS 35.0%
! TTTTCCTTTCGTACTCACAT+TGG + chr5.2:74534627-74534646 MS.gene016870:intron 35.0%
! TTTTCTCAAGAAGCAGTGAA+TGG + chr5.2:74533022-74533041 MS.gene016870:intron 35.0%
!! AACAAAGGCATCAGAAAATC+TGG - chr5.2:74532374-74532393 None:intergenic 35.0%
!! AGTTCACAAAAGTTGATGGA+AGG + chr5.2:74533413-74533432 MS.gene016870:CDS 35.0%
!! GCATAGTAAGAGCTTTATTG+TGG - chr5.2:74533583-74533602 None:intergenic 35.0%
!! GTTCACAAAAGTTGATGGAA+GGG + chr5.2:74533414-74533433 MS.gene016870:CDS 35.0%
!! TAACCTCTTTTTGGTATTGC+AGG + chr5.2:74535882-74535901 MS.gene016870:intron 35.0%
!! TGTTTTATTGCACGTCGATA+AGG + chr5.2:74535140-74535159 MS.gene016870:intron 35.0%
!!! AATTGGTTTTCCGATATGCA+GGG + chr5.2:74535372-74535391 MS.gene016870:intron 35.0%
!!! GTCTCTAAGGTGGTATTTTA+TGG + chr5.2:74534846-74534865 MS.gene016870:intron 35.0%
!!! TCGCATTTTGATTGGCAATT+AGG - chr5.2:74532318-74532337 None:intergenic 35.0%
!!! TTTTTTCGGCCTGATTTACA+TGG + chr5.2:74536217-74536236 MS.gene016870:intron 35.0%
AAAACAAGCTGATTACCAGG+TGG - chr5.2:74535809-74535828 None:intergenic 40.0%
AACTTGGAACCCCAAGTTTA+TGG + chr5.2:74535721-74535740 MS.gene016870:CDS 40.0%
AAGAAGAATCTTGCGGAAGT+TGG + chr5.2:74534465-74534484 MS.gene016870:CDS 40.0%
AAGTTCAATGATGTTGGAGG+TGG + chr5.2:74532095-74532114 MS.gene016870:CDS 40.0%
AATCAGGCCGAAAAAAGGAT+TGG - chr5.2:74536213-74536232 None:intergenic 40.0%
AATGAAGATGCCGGTATTGT+AGG + chr5.2:74532685-74532704 MS.gene016870:intron 40.0%
ACAAGCTCCTGTAAATCATC+TGG - chr5.2:74536468-74536487 None:intergenic 40.0%
ACCCACATATATCCCAATTG+AGG + chr5.2:74532851-74532870 MS.gene016870:CDS 40.0%
ACGCTAAGTCTAAACTTCCT+GGG + chr5.2:74534275-74534294 MS.gene016870:CDS 40.0%
AGACAAAGTAGAAACTCAGG+TGG - chr5.2:74534301-74534320 None:intergenic 40.0%
AGCAGACAAAGTAGAAACTC+AGG - chr5.2:74534304-74534323 None:intergenic 40.0%
AGCTCCTGTTCTATCTTCAT+TGG - chr5.2:74531229-74531248 None:intergenic 40.0%
ATATACAAGGGATCAGGTCT+TGG - chr5.2:74532447-74532466 None:intergenic 40.0%
ATATGTAGGTTGTTAGCTCG+AGG + chr5.2:74534918-74534937 MS.gene016870:intron 40.0%
ATGCCATCAGTAGCAAGTAT+AGG - chr5.2:74533798-74533817 None:intergenic 40.0%
ATGGCGAAGATTTCAATCCT+AGG + chr5.2:74533864-74533883 MS.gene016870:CDS 40.0%
ATGTTTCTCATGGTTCACCT+GGG + chr5.2:74534758-74534777 MS.gene016870:CDS 40.0%
ATTTCAATCCTAGGAATGGG+AGG + chr5.2:74533873-74533892 MS.gene016870:CDS 40.0%
CATGCAGAAATCATGAGAAG+AGG - chr5.2:74535270-74535289 None:intergenic 40.0%
CTTCAAAAAGCAAGCTCAAC+TGG - chr5.2:74536018-74536037 None:intergenic 40.0%
GAATGAATTGAGGGAAGACA+AGG - chr5.2:74533507-74533526 None:intergenic 40.0%
GAGAAGACTCTGTTCACAAT+CGG + chr5.2:74531602-74531621 MS.gene016870:CDS 40.0%
GCAAGATTCTTCTTCTTCCA+TGG - chr5.2:74534459-74534478 None:intergenic 40.0%
GGAAAAGACCTTGCTTATGA+CGG + chr5.2:74531578-74531597 MS.gene016870:CDS 40.0%
GGCCCCTGATATCTAAATAT+AGG + chr5.2:74534945-74534964 MS.gene016870:CDS 40.0%
GTGAATGTTGCTAACACAGA+TGG + chr5.2:74531343-74531362 MS.gene016870:CDS 40.0%
GTGAGGGATCTGATAAAATG+TGG + chr5.2:74534071-74534090 MS.gene016870:CDS 40.0%
GTGGTGTACTTGGATGTAAT+GGG + chr5.2:74532114-74532133 MS.gene016870:CDS 40.0%
GTGTCTGATAAGGAACATGA+AGG + chr5.2:74535025-74535044 MS.gene016870:CDS 40.0%
GTTCCTGCAATACCAAAAAG+AGG - chr5.2:74535888-74535907 None:intergenic 40.0%
TCATGTTCCTTATCAGACAC+TGG - chr5.2:74535025-74535044 None:intergenic 40.0%
TCGACGTGCAATAAAACATC+GGG - chr5.2:74535138-74535157 None:intergenic 40.0%
TGACATTCCTTCAATTGCTG+CGG + chr5.2:74534786-74534805 MS.gene016870:CDS 40.0%
TTTCCACAAGGGAAGATCTT+TGG - chr5.2:74533203-74533222 None:intergenic 40.0%
! ACACAGTTGATGTTTGGGAA+TGG + chr5.2:74533845-74533864 MS.gene016870:intron 40.0%
! ACCAAGAGTACAAGATAACC+GGG + chr5.2:74532525-74532544 MS.gene016870:CDS 40.0%
! ACTATCCTGAAGCAGTGTTT+TGG + chr5.2:74535306-74535325 MS.gene016870:intron 40.0%
! AGGTTTACTCTGAAGAAGAG+AGG + chr5.2:74532705-74532724 MS.gene016870:intron 40.0%
! ATTTTCTCAACTCTGACCAC+AGG - chr5.2:74534247-74534266 None:intergenic 40.0%
! CACGTTCTTTTGGATGAGAT+TGG + chr5.2:74536435-74536454 MS.gene016870:CDS 40.0%
! CTATCCTGAAGCAGTGTTTT+GGG + chr5.2:74535307-74535326 MS.gene016870:intron 40.0%
! TTCAAACAGGTTGAAACGTG+TGG + chr5.2:74531676-74531695 MS.gene016870:intron 40.0%
!! AATTACAGCTGGTCTTTGCA+CGG - chr5.2:74532563-74532582 None:intergenic 40.0%
!! AGGATCTCTCGCATTTTGAT+TGG - chr5.2:74532326-74532345 None:intergenic 40.0%
!! AGTGGATTGTCTCTGAACAT+AGG + chr5.2:74532164-74532183 MS.gene016870:CDS 40.0%
!!! GAATTGGTTTTCCGATATGC+AGG + chr5.2:74535371-74535390 MS.gene016870:intron 40.0%
AAGAAGAGAGGTTCTGTTCC+TGG + chr5.2:74532717-74532736 MS.gene016870:CDS 45.0%
ACAACCATGATTGTACGTCC+TGG + chr5.2:74532277-74532296 MS.gene016870:CDS 45.0%
ACATTAGGTGGAACAATGGG+AGG - chr5.2:74531202-74531221 None:intergenic 45.0%
ACTCCAAAGATCTTCCCTTG+TGG + chr5.2:74533197-74533216 MS.gene016870:CDS 45.0%
AGATCAGAGTTCTTCCTCTC+AGG - chr5.2:74534328-74534347 None:intergenic 45.0%
AGCGCAGAAAAATTGCTCTG+CGG + chr5.2:74532784-74532803 MS.gene016870:CDS 45.0%
AGCTTCAGAACCACTCAAAG+TGG + chr5.2:74532146-74532165 MS.gene016870:CDS 45.0%
AGGTTGAAACGTGTGGATGT+TGG + chr5.2:74531683-74531702 MS.gene016870:intron 45.0%
CAACCATGATTGTACGTCCT+GGG + chr5.2:74532278-74532297 MS.gene016870:CDS 45.0%
CACGCTAAGTCTAAACTTCC+TGG + chr5.2:74534274-74534293 MS.gene016870:CDS 45.0%
CAGAGACAATCCACTTTGAG+TGG - chr5.2:74532159-74532178 None:intergenic 45.0%
CAGATACTGGTCATTAACCC+TGG - chr5.2:74534517-74534536 None:intergenic 45.0%
CTACTAAGACTCCAATGGCT+AGG + chr5.2:74531266-74531285 MS.gene016870:CDS 45.0%
CTAGCCATTGGAGTCTTAGT+AGG - chr5.2:74531268-74531287 None:intergenic 45.0%
CTCTAAATGACCGAGAGACT+AGG - chr5.2:74532945-74532964 None:intergenic 45.0%
CTTACCGACAGAAATAGCAG+TGG - chr5.2:74536625-74536644 None:intergenic 45.0%
CTTCCCTTGTGGAAAAGTCT+AGG + chr5.2:74533208-74533227 MS.gene016870:CDS 45.0%
GAAGTTGCTTGTCTTCGCAA+TGG + chr5.2:74532651-74532670 MS.gene016870:intron 45.0%
GAGATCCTTTCAGTCTTGAC+TGG + chr5.2:74532338-74532357 MS.gene016870:CDS 45.0%
GATGTTTCTCATGGTTCACC+TGG + chr5.2:74534757-74534776 MS.gene016870:CDS 45.0%
GCAATTAGGAAGTCAACCAC+AGG - chr5.2:74532304-74532323 None:intergenic 45.0%
GCGTTGAAAACAAGCGACTA+TGG + chr5.2:74533346-74533365 MS.gene016870:CDS 45.0%
GCTTCCTACTAAGACTCCAA+TGG + chr5.2:74531261-74531280 MS.gene016870:CDS 45.0%
GGCTTCCCGACATTAATACA+TGG - chr5.2:74532825-74532844 None:intergenic 45.0%
GGTGGTGTACTTGGATGTAA+TGG + chr5.2:74532113-74532132 MS.gene016870:CDS 45.0%
GTTCAAGCCAGTGTCTGATA+AGG + chr5.2:74535015-74535034 MS.gene016870:CDS 45.0%
TACTGGTCATTAACCCTGGT+AGG - chr5.2:74534513-74534532 None:intergenic 45.0%
TACTTTGTCTGCTTCCTGAG+AGG + chr5.2:74534311-74534330 MS.gene016870:CDS 45.0%
TATCCTCTTCTTATCAGGGC+TGG - chr5.2:74531786-74531805 None:intergenic 45.0%
TCCAATCTGCTATGCACACT+TGG + chr5.2:74536727-74536746 MS.gene016870:CDS 45.0%
TCCATGCCCAAAATGAGAGT+AGG - chr5.2:74534739-74534758 None:intergenic 45.0%
TCCTCAGTATCATCTTCTCC+AGG - chr5.2:74532738-74532757 None:intergenic 45.0%
TCCTCCAATGTGAGTACGAA+AGG - chr5.2:74534634-74534653 None:intergenic 45.0%
TCCTGGAGAAGATGATACTG+AGG + chr5.2:74532734-74532753 MS.gene016870:CDS 45.0%
TCCTTTCGTACTCACATTGG+AGG + chr5.2:74534630-74534649 MS.gene016870:intron 45.0%
TGAACTCAGCCAAATCATCG+AGG + chr5.2:74535594-74535613 MS.gene016870:CDS 45.0%
TGCTTCGAAAATTCCTCTGC+AGG + chr5.2:74531850-74531869 MS.gene016870:CDS 45.0%
TGGTATTGCAGGAACTGTTG+TGG + chr5.2:74535893-74535912 MS.gene016870:intron 45.0%
TTGGGCATGGATGTTTCTCA+TGG + chr5.2:74534748-74534767 MS.gene016870:CDS 45.0%
! AAGGGTTTTGCAAGCTCCAA+GGG + chr5.2:74533432-74533451 MS.gene016870:CDS 45.0%
! CTGCCTAGACTTTTCCACAA+GGG - chr5.2:74533214-74533233 None:intergenic 45.0%
! GCAGAGGAATTTTCGAAGCA+AGG - chr5.2:74531850-74531869 None:intergenic 45.0%
! GGCTTTGGTATAGCGTTGAA+GGG - chr5.2:74533169-74533188 None:intergenic 45.0%
! TACTTGCTACTGATGGCATC+TGG + chr5.2:74533799-74533818 MS.gene016870:intron 45.0%
! TCCTACTCTCATTTTGGGCA+TGG + chr5.2:74534735-74534754 MS.gene016870:CDS 45.0%
! TCTGCCTAGACTTTTCCACA+AGG - chr5.2:74533215-74533234 None:intergenic 45.0%
!! AAGATCTTTGGAGTGTGGAC+AGG - chr5.2:74533191-74533210 None:intergenic 45.0%
!! AAGGGAAGATCTTTGGAGTG+TGG - chr5.2:74533196-74533215 None:intergenic 45.0%
!! ACTTTGAGTGGTTCTGAAGC+TGG - chr5.2:74532147-74532166 None:intergenic 45.0%
!! AGATCTTTGGAGTGTGGACA+GGG - chr5.2:74533190-74533209 None:intergenic 45.0%
!! AGCACCACTGCTATTTCTGT+CGG + chr5.2:74536618-74536637 MS.gene016870:CDS 45.0%
!! TAGTTCTGAGGAAAGACGAC+CGG + chr5.2:74535417-74535436 MS.gene016870:CDS 45.0%
!! TGAAGAGGCACCGAATGAAA+AGG - chr5.2:74536085-74536104 None:intergenic 45.0%
!!! ATATTGTTTTTTTTTTTTTT+GGG + chr5.2:74535648-74535667 MS.gene016870:intron 5.0%
!!! ATATTTATATTTTGATTAAT+AGG + chr5.2:74536673-74536692 MS.gene016870:intron 5.0%
!!! TATATTGTTTTTTTTTTTTT+TGG + chr5.2:74535647-74535666 MS.gene016870:intron 5.0%
AAGATGGACGCCCTGTTGAA+GGG + chr5.2:74531495-74531514 MS.gene016870:CDS 50.0%
AAGTTCCACCTCCCATTCCT+AGG - chr5.2:74533884-74533903 None:intergenic 50.0%
ACACCAGCCCTGATAAGAAG+AGG + chr5.2:74531780-74531799 MS.gene016870:CDS 50.0%
AGGTTGTTAGCTCGAGGCAA+TGG + chr5.2:74534924-74534943 MS.gene016870:intron 50.0%
AGTTTGGCAACTGTGGGATG+AGG - chr5.2:74536832-74536851 None:intergenic 50.0%
CAACCTTCGAACCCTGAGTT+CGG - chr5.2:74534979-74534998 None:intergenic 50.0%
CACTTGGCTGCATCTCAAGT+TGG + chr5.2:74536743-74536762 MS.gene016870:CDS 50.0%
CATTGTCTGGAGATCGAGGT+TGG - chr5.2:74535784-74535803 None:intergenic 50.0%
CCATTGCCGATGCCTTAAAG+GGG + chr5.2:74531873-74531892 MS.gene016870:CDS 50.0%
CTCACCCAAAACACTGCTTC+AGG - chr5.2:74535314-74535333 None:intergenic 50.0%
CTCAGTTGCATGCCCCTTTA+AGG - chr5.2:74531888-74531907 None:intergenic 50.0%
GAAGGAATGTCAGATTGCCC+AGG - chr5.2:74534778-74534797 None:intergenic 50.0%
GAGCGAATGCTACGTAACTG+TGG + chr5.2:74533373-74533392 MS.gene016870:CDS 50.0%
GATGTTGGAGGTGGTGTACT+TGG + chr5.2:74532104-74532123 MS.gene016870:CDS 50.0%
GCCAAGTGTGCATAGCAGAT+TGG - chr5.2:74536731-74536750 None:intergenic 50.0%
GCCATTGCCGATGCCTTAAA+GGG + chr5.2:74531872-74531891 MS.gene016870:CDS 50.0%
GCCCGGTTATCTTGTACTCT+TGG - chr5.2:74532529-74532548 None:intergenic 50.0%
GGGATATATGTGGGTCGCTT+TGG - chr5.2:74532846-74532865 None:intergenic 50.0%
GGTGGGATGAATTCGCAGTT+AGG + chr5.2:74534673-74534692 MS.gene016870:CDS 50.0%
GTTTGGCAACTGTGGGATGA+GGG - chr5.2:74536831-74536850 None:intergenic 50.0%
TCAATCCTAGGAATGGGAGG+TGG + chr5.2:74533876-74533895 MS.gene016870:CDS 50.0%
TCAGTGCATAGCTCCTACCA+GGG + chr5.2:74534497-74534516 MS.gene016870:CDS 50.0%
TCTGTTCTCAGGGTACAAGC+AGG + chr5.2:74536400-74536419 MS.gene016870:intron 50.0%
TCTTCTCGCCGTCATAAGCA+AGG - chr5.2:74531589-74531608 None:intergenic 50.0%
TGATGTGCGAGGACTTGTGA+GGG + chr5.2:74534055-74534074 MS.gene016870:CDS 50.0%
TTACCAGGTGGCACATTGTC+TGG - chr5.2:74535797-74535816 None:intergenic 50.0%
TTAGGTGGAACAATGGGAGG+TGG - chr5.2:74531199-74531218 None:intergenic 50.0%
TTCTCAACTCTGACCACAGG+CGG - chr5.2:74534244-74534263 None:intergenic 50.0%
! GAAGGGTTTTGCAAGCTCCA+AGG + chr5.2:74533431-74533450 MS.gene016870:CDS 50.0%
! GGGCTTTGGTATAGCGTTGA+AGG - chr5.2:74533170-74533189 None:intergenic 50.0%
! TCTGAAACTTCCTCGAGCCA+AGG + chr5.2:74536791-74536810 MS.gene016870:CDS 50.0%
!! TGCATGCCCCTTTAAGGCAT+CGG - chr5.2:74531882-74531901 None:intergenic 50.0%
AAGACCCTCATCCGCTCTTG+TGG - chr5.2:74533240-74533259 None:intergenic 55.0%
AAGACTCCAATGGCTAGGCG+TGG + chr5.2:74531271-74531290 MS.gene016870:CDS 55.0%
AGAAGCCACAAGAGCGGATG+AGG + chr5.2:74533232-74533251 MS.gene016870:CDS 55.0%
AGGCCCAGGACGTACAATCA+TGG - chr5.2:74532284-74532303 None:intergenic 55.0%
AGGGCATGTGTCCGAACTCA+GGG + chr5.2:74534965-74534984 MS.gene016870:CDS 55.0%
AGTAGAAACTCAGGTGGCCC+AGG - chr5.2:74534295-74534314 None:intergenic 55.0%
CAATGGCTAGGCGTGGCTTA+GGG + chr5.2:74531278-74531297 MS.gene016870:CDS 55.0%
CAGCGCCTTTCCCTTCAACA+GGG - chr5.2:74531508-74531527 None:intergenic 55.0%
CTAGGCAGAAGCCACAAGAG+CGG + chr5.2:74533226-74533245 MS.gene016870:CDS 55.0%
CTCAGTGCATAGCTCCTACC+AGG + chr5.2:74534496-74534515 MS.gene016870:CDS 55.0%
GAAACTTCCTCGAGCCAAGG+TGG + chr5.2:74536794-74536813 MS.gene016870:CDS 55.0%
GAAGATGGACGCCCTGTTGA+AGG + chr5.2:74531494-74531513 MS.gene016870:CDS 55.0%
GAAGCCACAAGAGCGGATGA+GGG + chr5.2:74533233-74533252 MS.gene016870:CDS 55.0%
GGCACATTGTCTGGAGATCG+AGG - chr5.2:74535788-74535807 None:intergenic 55.0%
GGCCATTGCCGATGCCTTAA+AGG + chr5.2:74531871-74531890 MS.gene016870:CDS 55.0%
GTGATGTGCGAGGACTTGTG+AGG + chr5.2:74534054-74534073 MS.gene016870:CDS 55.0%
GTGGAACAATGGGAGGTGGT+GGG - chr5.2:74531195-74531214 None:intergenic 55.0%
TAGGGCATGTGTCCGAACTC+AGG + chr5.2:74534964-74534983 MS.gene016870:CDS 55.0%
TCTCCAGACAATGTGCCACC+TGG + chr5.2:74535791-74535810 MS.gene016870:CDS 55.0%
TGGAACAATGGGAGGTGGTG+GGG - chr5.2:74531194-74531213 None:intergenic 55.0%
TGTCCGAACTCAGGGTTCGA+AGG + chr5.2:74534973-74534992 MS.gene016870:CDS 55.0%
TTGGAGTGTGGACAGGGCTT+TGG - chr5.2:74533184-74533203 None:intergenic 55.0%
! AGAGCGGATGAGGGTCTTGT+CGG + chr5.2:74533242-74533261 MS.gene016870:CDS 55.0%
! ATTGACACCACCTTGGCTCG+AGG - chr5.2:74536804-74536823 None:intergenic 55.0%
!! CCCCTTTAAGGCATCGGCAA+TGG - chr5.2:74531876-74531895 None:intergenic 55.0%
!! CTGTTGAAGGGAAAGGCGCT+GGG + chr5.2:74531507-74531526 MS.gene016870:CDS 55.0%
AGGAAGTCAACCACAGGCCC+AGG - chr5.2:74532298-74532317 None:intergenic 60.0%
AGGCGTGGCTTAGGGACGAA+GGG + chr5.2:74531286-74531305 MS.gene016870:CDS 60.0%
CCAATGGCTAGGCGTGGCTT+AGG + chr5.2:74531277-74531296 MS.gene016870:CDS 60.0%
CCAGCGCCTTTCCCTTCAAC+AGG - chr5.2:74531509-74531528 None:intergenic 60.0%
CCTAAGCCACGCCTAGCCAT+TGG - chr5.2:74531280-74531299 None:intergenic 60.0%
GATTGTACGTCCTGGGCCTG+TGG + chr5.2:74532285-74532304 MS.gene016870:CDS 60.0%
GCACGGAAATTCGCTCAGCC+CGG - chr5.2:74532546-74532565 None:intergenic 60.0%
GGACGCCCTGTTGAAGGGAA+AGG + chr5.2:74531500-74531519 MS.gene016870:CDS 60.0%
GGTGGAACAATGGGAGGTGG+TGG - chr5.2:74531196-74531215 None:intergenic 60.0%
TAGGCGTGGCTTAGGGACGA+AGG + chr5.2:74531285-74531304 MS.gene016870:CDS 60.0%
TCTGCACGCTGTGATGTGCG+AGG + chr5.2:74534044-74534063 MS.gene016870:CDS 60.0%
TGGCAACTGTGGGATGAGGG+AGG - chr5.2:74536828-74536847 None:intergenic 60.0%
! CCTGTTGAAGGGAAAGGCGC+TGG + chr5.2:74531506-74531525 MS.gene016870:CDS 60.0%
! GGAACAATGGGAGGTGGTGG+GGG - chr5.2:74531193-74531212 None:intergenic 60.0%
!! GGGAGGCATTGACACCACCT+TGG - chr5.2:74536811-74536830 None:intergenic 60.0%
!! TTGAAGGGAAAGGCGCTGGG+AGG + chr5.2:74531510-74531529 MS.gene016870:CDS 60.0%
GTTTAGGCGTGCACCGCCTG+TGG + chr5.2:74534228-74534247 MS.gene016870:CDS 65.0%
! GCATCGGCAATGGCCTGCAG+AGG - chr5.2:74531866-74531885 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 74531160 74536889 74531160 ID=MS.gene016870
chr5.2 mRNA 74531160 74536889 74531160 ID=MS.gene016870.t1;Parent=MS.gene016870
chr5.2 exon 74531160 74531384 74531160 ID=MS.gene016870.t1.exon1;Parent=MS.gene016870.t1
chr5.2 CDS 74531160 74531384 74531160 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74531479 74531684 74531479 ID=MS.gene016870.t1.exon2;Parent=MS.gene016870.t1
chr5.2 CDS 74531479 74531684 74531479 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74531769 74531966 74531769 ID=MS.gene016870.t1.exon3;Parent=MS.gene016870.t1
chr5.2 CDS 74531769 74531966 74531769 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74532049 74532185 74532049 ID=MS.gene016870.t1.exon4;Parent=MS.gene016870.t1
chr5.2 CDS 74532049 74532185 74532049 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74532269 74532366 74532269 ID=MS.gene016870.t1.exon5;Parent=MS.gene016870.t1
chr5.2 CDS 74532269 74532366 74532269 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74532479 74532576 74532479 ID=MS.gene016870.t1.exon6;Parent=MS.gene016870.t1
chr5.2 CDS 74532479 74532576 74532479 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74532707 74532872 74532707 ID=MS.gene016870.t1.exon7;Parent=MS.gene016870.t1
chr5.2 CDS 74532707 74532872 74532707 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74533150 74533266 74533150 ID=MS.gene016870.t1.exon8;Parent=MS.gene016870.t1
chr5.2 CDS 74533150 74533266 74533150 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74533346 74533453 74533346 ID=MS.gene016870.t1.exon9;Parent=MS.gene016870.t1
chr5.2 CDS 74533346 74533453 74533346 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74533851 74533913 74533851 ID=MS.gene016870.t1.exon10;Parent=MS.gene016870.t1
chr5.2 CDS 74533851 74533913 74533851 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74533996 74534109 74533996 ID=MS.gene016870.t1.exon11;Parent=MS.gene016870.t1
chr5.2 CDS 74533996 74534109 74533996 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74534187 74534352 74534187 ID=MS.gene016870.t1.exon12;Parent=MS.gene016870.t1
chr5.2 CDS 74534187 74534352 74534187 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74534454 74534566 74534454 ID=MS.gene016870.t1.exon13;Parent=MS.gene016870.t1
chr5.2 CDS 74534454 74534566 74534454 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74534670 74534807 74534670 ID=MS.gene016870.t1.exon14;Parent=MS.gene016870.t1
chr5.2 CDS 74534670 74534807 74534670 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74534926 74535074 74534926 ID=MS.gene016870.t1.exon15;Parent=MS.gene016870.t1
chr5.2 CDS 74534926 74535074 74534926 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74535393 74535458 74535393 ID=MS.gene016870.t1.exon16;Parent=MS.gene016870.t1
chr5.2 CDS 74535393 74535458 74535393 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74535552 74535615 74535552 ID=MS.gene016870.t1.exon17;Parent=MS.gene016870.t1
chr5.2 CDS 74535552 74535615 74535552 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74535701 74535812 74535701 ID=MS.gene016870.t1.exon18;Parent=MS.gene016870.t1
chr5.2 CDS 74535701 74535812 74535701 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74535904 74535977 74535904 ID=MS.gene016870.t1.exon19;Parent=MS.gene016870.t1
chr5.2 CDS 74535904 74535977 74535904 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74536411 74536505 74536411 ID=MS.gene016870.t1.exon20;Parent=MS.gene016870.t1
chr5.2 CDS 74536411 74536505 74536411 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74536608 74536639 74536608 ID=MS.gene016870.t1.exon21;Parent=MS.gene016870.t1
chr5.2 CDS 74536608 74536639 74536608 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
chr5.2 exon 74536723 74536889 74536723 ID=MS.gene016870.t1.exon22;Parent=MS.gene016870.t1
chr5.2 CDS 74536723 74536889 74536723 ID=cds.MS.gene016870.t1;Parent=MS.gene016870.t1
Gene Sequence

>MS.gene016870

ATGAGTTCACAAGGACACAAGGACTATTTGCCCCCACCACCTCCCATTGTTCCACCTAATGTTAAACCAATGAAGATAGAACAGGAGCTTGCAAAGAAGAAGCTTCCTACTAAGACTCCAATGGCTAGGCGTGGCTTAGGGACGAAGGGAACTAAACTGCCTTTGTTAACAAATCACTTTGAAGTGAATGTTGCTAACACAGATGGGTTTTTCTTTCAGTATAGTGTATGTTTTGTATTTCATGATTCGGTTGTTTTCTTGCTAACATTTGTGTATTAATTTTTTGTTAAATGTTGACTCATACAATGTATTTGTGCAGGTTGCTTTGTTTTATGAAGATGGACGCCCTGTTGAAGGGAAAGGCGCTGGGAGGAAGATACTTGACAATGTTCAAAAAACATATGTTTCTGAGCTTAATGGAAAAGACCTTGCTTATGACGGCGAGAAGACTCTGTTCACAATCGGCTCTCTAGCTCATAAGAAGCTCGAGTTCACTGTTGTTGTTGAAGATGTCACTTCAAACAGGTTGAAACGTGTGGATGTTGGTTTTTGAAATTGGTGTTGTTCATGGTTTTTTATGTTTCTGATATTTAACTTTGCCTTTTATAGGAACAATGCGAACACCAGCCCTGATAAGAAGAGGATAAGAAAATCATACCGCTCGAAGACTTATAAAGTTGAAATCAGCCTTGCTTCGAAAATTCCTCTGCAGGCCATTGCCGATGCCTTAAAGGGGCATGCAACTGAGAGTTATCAAGAAGCCATTAGGGTTCTTGATATTATCTTGAGACAACATGCTGCTAAACAGTACGAACTTTAATAACTACATGTATTTTTTATGTAATATAGAATAACAACAGTAATAATATCTTTGTAATATCAATCACAGGGGCTGTCTGCTAGTGCGCCAAAATTTCTTTCACAACGACCCAAAGAAGTTCAATGATGTTGGAGGTGGTGTACTTGGATGTAATGGGCTGCATTCCAGCTTCAGAACCACTCAAAGTGGATTGTCTCTGAACATAGGTTTGATCTTGATTCCTTTGTTGTCTATATTCTCATCTGAATAATAATTTGTCACATTTCTTTACTTCTTTCAATTTGTTTAGATGTGTCGACAACCATGATTGTACGTCCTGGGCCTGTGGTTGACTTCCTAATTGCCAATCAAAATGCGAGAGATCCTTTCAGTCTTGACTGGAATAAGGTAACCAGATTTTCTGATGCCTTTGTTTTGCTAATTGTTCCTTAACTTTTTGTTATACTCATTGTTCTTCGTTTAAACCAAGACCTGATCCCTTGTATATTTTATTGTGTAGGCTAAAAGGACTCTGAAGAATTTGAGGATCACGGCTAGCCCATCTAACCAAGAGTACAAGATAACCGGGCTGAGCGAATTTCCGTGCAAAGACCAGCTGTAATTTTTCTATCCCATTTTAAGTTGATTGTGTAATCTATTTATGACTTTCTTAATGTCTGGAATTGTTACTTGAAGTTGCTTGTCTTCGCAATGGATGTTGTTATTAATGAAGATGCCGGTATTGTAGGTTTACTCTGAAGAAGAGAGGTTCTGTTCCTGGAGAAGATGATACTGAGGAGATCACTGTTTATGATTATTTTGTCAAGCGCAGAAAAATTGCTCTGCGGTACTCAGCTGATCTGCCATGTATTAATGTCGGGAAGCCAAAGCGACCCACATATATCCCAATTGAGGTAGATTTGAAGCTTTATATTAGTTTAGTACTAACCTCATAATGTGTATTATCTATTGGATATAATTTACCTAGTCTCTCGGTCATTTAGAGATCTATAAATTGGTCGCAGCTTTAATTTTTTGATGTAGATTAGGTGTTGACGATTCATTTTCTCAAGAAGCAGTGAATGGATTAATAAACTTTCAATTTTCTTTTCTTTCTGAAACTCTAATGATGTGTAGATTTATCTTCCAATACTTGATAACTATTTTCGAACATTTATGTGTTTTACTTAGCTTTGCTCTTTGGTATCCCTTCAACGCTATACCAAAGCCCTGTCCACACTCCAAAGATCTTCCCTTGTGGAAAAGTCTAGGCAGAAGCCACAAGAGCGGATGAGGGTCTTGTCGGATGTAAGTCTCTTTGATATATATTGACTAATGAATTGTCATATGAATGTCACTTCACTGAATATTATTTGCTGATTTACAGGCGTTGAAAACAAGCGACTATGGCTCTGAGCGAATGCTACGTAACTGTGGCATTTCAATAACGTCTGAGTTCACAAAAGTTGATGGAAGGGTTTTGCAAGCTCCAAGGGTATTGCTCTTTTATCATTGTTTTCATGAAAATCCTTATTTGTTTTGTTTCCTTGTCTTCCCTCAATTCATTCGCTGTTATTGAGTGTCTTTTATTGATTTTCCTTCAAAATATTGCTAGAAAAAGCCACAATAAAGCTCTTACTATGCGAAGTTATTTTCAGCAATTGAATAATCACCATTTCTTTGAATGCTTGACATCATTTTTAAAATTTACTTGTGTTCCCTTAACTTCTCTTGATGATTACCAAATTACTTTTGGAAGAAATTTTTCTGTTCCTGTTTGATAGTTATATTGTTGTGCATGTTCTTTAGTGAGATGATCTTAATTGCGAAATGTTTCCTATACTTGCTACTGATGGCATCTGGCATGTAATTATCTCTATTGAGTTACACAGTTGATGTTTGGGAATGGCGAAGATTTCAATCCTAGGAATGGGAGGTGGAACTTCAATAATAAGGTATTCATGACAAATCTGAGCAATACTTTTGTTGATGGCTTTCATCAACATTCTTTTTCTAATGATTTAATATTGTTTCCAGAAAATTGTGGAACCTGTTAAAATAAAAAACTGGGCTGTGGTGAACTTTTCTGCACGCTGTGATGTGCGAGGACTTGTGAGGGATCTGATAAAATGTGGAAGAATGAAAGGAATTGTAAGTTCTGTTGCAGCATATTTACTGACATGCATAAAAAGGTGCTAACTCTATTCTATTTCGTTTGCTTTTGGCAGATTCTTGAACCACCTTTTGATGTCTTTGAAGAAAATGGTCAGTTTAGGCGTGCACCGCCTGTGGTCAGAGTTGAGAAAATGTTCGAACACGCTAAGTCTAAACTTCCTGGGCCACCTGAGTTTCTACTTTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTTTATGGTTAGTTCCTTGATATATTTCCATGTTCTATTTACCTTTTTTTTAATGCATTTGTTAAATGGCTTTCTTAATAAAAATTAATTGGAAATTTACTTGTGAAGGTCCATGGAAGAAGAAGAATCTTGCGGAAGTTGGAATCGTTACTCAGTGCATAGCTCCTACCAGGGTTAATGACCAGTATCTGACAAATGTTTTGCTGAAGATCAATGCTAAGGTATATTCATTCTTCCTTTGGTTTCTTTTAATATTATTATTTTCTAGTTTGTAACCAGTATTTTCCTTTCGTACTCACATTGGAGGATTTTATTCTTTTGTAGCTTGGTGGGATGAATTCGCAGTTAGGCGTTGAATACTCTCGATCCATCCCTATTGTGTCGAAAATTCCTACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGGCAATCTGACATTCCTTCAATTGCTGCGGTAATAAAAGTTCTTATTGTGTGTTCTTTAGAAAATATGTCTCTAAGGTGGTATTTTATGGGTACACCATTATCTAAATGTTTTTTTATTTTTCTGATGTAAATGTCTACATATGTAGGTTGTTAGCTCGAGGCAATGGCCCCTGATATCTAAATATAGGGCATGTGTCCGAACTCAGGGTTCGAAGGTTGAGATGATTGACAATTTGTTCAAGCCAGTGTCTGATAAGGAACATGAAGGAATTATAAAAGATGAAGGAATTATAAGGTATATTTATTTTTGATAACCAAGTTTTTCCTTGAAATTATTTCAGGACGACTAATAGCTCCCGATGTTTTATTGCACGTCGATAAGGTCTAATATTCAAAGATCGATTGGAAGCAAGAATCCTAATTTTTTCAACGACTGACTTTTCTGTGTGAAAAAAGGATCAAAGTTTTTATAGTTGTATAGCACACTCCTCTTCTCATGATTTCTGCATGATCATAAGATCATTGAACTATCCTGAAGCAGTGTTTTGGGTGAGTTATAGCAGTTTTCAGTTGATGGTTTATTTATTTTGGGAATTGGTTTTCCGATATGCAGGGAAATTTTGCTTGATTTTTTTCATAGTTCTGAGGAAAGACGACCGGACAATATCATCATTTTCAGGTTAACTTACTTTCCCAATTTTCTGCCATCGTTTTCTTCTACTTGTTGGTTTATTGCTACTAGTATGTACGCTTATAATTAATGTTATTGTAGGGATGGTGTTAGTGAGTCTCAGTTCAACCAAGTTTTGAACATTGAACTCAGCCAAATCATCGAGGTTCTTAAATTGATCAAATTTGCATTAAATATATATTGTTTTTTTTTTTTTTGGGGGGGTTTAATCTAAATCTTTCAAGTTTTAGGCTTGTAAATTTCTTGATGAAACTTGGAACCCCAAGTTTATGGTAATTGTTGCCCAGAAGAATCATCATACAAAATTCTTCCAACCTCGATCTCCAGACAATGTGCCACCTGGTAATCAGCTTGTTTTGAAGTCTGTCATAGTTCCATTTTTTTATATATAAAATTTGTTTCATGTCTAGCTAACCTCTTTTTGGTATTGCAGGAACTGTTGTGGACAGCAAAATTTGTCATCCTAGGAATTATGATTTTTATATGTGTGCTCATGCTGGAATGATTGTGAGTATCTTCTACTCTTTTTCTGATGATGTTCATTCCAGTTGAGCTTGCTTTTTGAAGTTGCATCACTCTTTTTCTCTGATCAAATGTGCGTGAATATATGACCTTTTCATTCGGTGCCTCTTCATTTTAGTTATATGTCTGGGGGTATTCATTTGAGTTCCAATGCAGTCTGTGTTAAATTCAATTTATATCGTATGTCTGTGATTTTGTGTTATGTCTGCTCATTACTCCAATCCTTTTTTCGGCCTGATTTACATGGTTATAATTATGATTGTTTTTTTTTAACACGATATAATTATGATTGTTACCTTGAAGACTTCAAATTATCTTTGTCAACCATTATGATAATAATCTGTAATCCTTTTTGCTTGCATTCTATCATGAAATTCAATAGCAAACCTTGTACTTATTTATCAAAATCTGTTCTCAGGGTACAAGCAGGCCAACACATTATCACGTTCTTTTGGATGAGATTGGCTTTTCTCCAGATGATTTACAGGAGCTTGTGCACTCTCTGTCTTATGTGTAAGTTTATATTTGGATTTGATTGCTTTGAAATTATGTTTCTGGTATTCTGATATTCAATTAATGTAGTAGCTTATAAAAATATTTGTTGTATGACAACAGTTATCAGCGGAGCACCACTGCTATTTCTGTCGGTAAGTTCTATCAAGAATTATATTTATTTGTTCATATTTATATTTTGATTAATAGGTGATAATTAGTAAAAACTTATATGCAGTTGCTCCAATCTGCTATGCACACTTGGCTGCATCTCAAGTTGGACAGTTCATGAAGTTTGAAGATAAGTCTGAAACTTCCTCGAGCCAAGGTGGTGTCAATGCCTCCCTCATCCCACAGTTGCCAAACTTACATAAGAGAGTCTGCAATTCCATGTTTTTTGTCTGA
Protein sequence

>MS.gene016870.t1

MSSQGHKDYLPPPPPIVPPNVKPMKIEQELAKKKLPTKTPMARRGLGTKGTKLPLLTNHFEVNVANTDGFFFQYSVALFYEDGRPVEGKGAGRKILDNVQKTYVSELNGKDLAYDGEKTLFTIGSLAHKKLEFTVVVEDVTSNRNNANTSPDKKRIRKSYRSKTYKVEISLASKIPLQAIADALKGHATESYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKKFNDVGGGVLGCNGLHSSFRTTQSGLSLNIDVSTTMIVRPGPVVDFLIANQNARDPFSLDWNKAKRTLKNLRITASPSNQEYKITGLSEFPCKDQLFTLKKRGSVPGEDDTEEITVYDYFVKRRKIALRYSADLPCINVGKPKRPTYIPIELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLSDALKTSDYGSERMLRNCGISITSEFTKVDGRVLQAPRLMFGNGEDFNPRNGRWNFNNKKIVEPVKIKNWAVVNFSARCDVRGLVRDLIKCGRMKGIILEPPFDVFEENGQFRRAPPVVRVEKMFEHAKSKLPGPPEFLLCLLPERKNSDLYGPWKKKNLAEVGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSQLGVEYSRSIPIVSKIPTLILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQGSKVEMIDNLFKPVSDKEHEGIIKDEGIIREILLDFFHSSEERRPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDETWNPKFMVIVAQKNHHTKFFQPRSPDNVPPGTVVDSKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSQGGVNASLIPQLPNLHKRVCNSMFFV