AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene39813

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39813.t1 MTR_5g087870 98.458 908 9 1 1 903 41 948 0.0 1851
MS.gene39813.t1 MTR_5g087870 96.035 908 9 2 1 903 41 926 0.0 1795
MS.gene39813.t1 MTR_5g087890 85.242 908 113 6 1 903 1 892 0.0 1559
MS.gene39813.t1 MTR_3g078647 80.839 882 156 6 28 903 49 923 0.0 1504
MS.gene39813.t1 MTR_6g043180 79.528 889 173 3 20 903 19 903 0.0 1469
MS.gene39813.t1 MTR_3g010650 59.703 876 322 10 39 902 19 875 0.0 1052
MS.gene39813.t1 MTR_3g083300 59.955 884 329 9 35 902 34 908 0.0 1034
MS.gene39813.t1 MTR_6g477980 36.393 915 480 28 43 902 241 1108 7.86e-163 505
MS.gene39813.t1 MTR_6g477980 36.393 915 480 28 43 902 247 1114 9.69e-163 505
MS.gene39813.t1 MTR_2g059590 34.787 894 506 21 42 902 53 902 6.20e-160 491
MS.gene39813.t1 MTR_4g056430 35.610 893 499 25 43 902 121 970 2.56e-159 492
MS.gene39813.t1 MTR_1g102630 34.922 902 504 23 43 902 117 977 3.53e-158 489
MS.gene39813.t1 MTR_1g041345 34.705 899 506 25 43 902 122 978 2.05e-154 479
MS.gene39813.t1 MTR_4g056470 35.043 936 515 25 10 902 122 1007 3.24e-152 474
MS.gene39813.t1 MTR_4g113200 34.298 898 505 24 42 902 26 875 2.74e-150 465
MS.gene39813.t1 MTR_2g059790 38.143 603 334 14 326 902 4 593 4.10e-122 383
MS.gene39813.t1 MTR_5g042590 30.065 918 550 28 31 902 144 1015 7.76e-118 384
MS.gene39813.t1 MTR_2g059590 31.214 692 411 19 42 710 53 702 2.76e-94 312
MS.gene39813.t1 MTR_4g083610 32.000 725 431 21 165 855 223 919 5.20e-94 318
MS.gene39813.t1 MTR_2g028910 30.055 722 443 20 168 855 282 975 5.28e-92 313
MS.gene39813.t1 MTR_7g107230 45.926 270 33 6 306 572 62 221 8.44e-56 193
MS.gene39813.t1 MTR_3g101730 36.416 173 72 4 632 800 34 172 1.04e-24 102
MS.gene39813.t1 MTR_5g099230 60.274 73 25 1 831 903 38 106 1.36e-19 86.7
MS.gene39813.t1 MTR_1g038380 28.378 296 161 10 479 767 171 422 1.63e-19 92.8
MS.gene39813.t1 MTR_6g037320 52.703 74 35 0 592 665 1 74 1.93e-17 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene39813.t1 AT2G27040 71.059 888 242 6 25 902 41 923 0.0 1342
MS.gene39813.t1 AT2G27040 71.059 888 242 6 25 902 41 923 0.0 1342
MS.gene39813.t1 AT5G21150 67.598 895 266 12 16 902 17 895 0.0 1241
MS.gene39813.t1 AT5G21030 59.845 904 297 17 10 902 5 853 0.0 1034
MS.gene39813.t1 AT5G21030 59.845 904 293 18 10 902 5 849 0.0 1029
MS.gene39813.t1 AT2G32940 56.307 872 348 9 42 902 28 877 0.0 959
MS.gene39813.t1 AT2G27880 36.232 897 485 25 43 902 150 996 2.14e-161 498
MS.gene39813.t1 AT5G43810 34.845 904 498 24 43 902 131 987 2.09e-157 488
MS.gene39813.t1 AT5G43810 34.845 904 498 24 43 902 131 987 2.09e-157 488
MS.gene39813.t1 AT5G43810 34.845 904 498 24 43 902 131 987 2.09e-157 488
MS.gene39813.t1 AT5G43810 34.845 904 498 24 43 902 131 987 2.09e-157 488
MS.gene39813.t1 AT1G48410 33.579 950 526 27 12 902 144 1047 4.37e-153 478
MS.gene39813.t1 AT1G48410 33.544 951 527 27 12 902 144 1049 5.61e-153 478
MS.gene39813.t1 AT1G48410 33.544 951 527 27 12 902 144 1049 5.61e-153 478
MS.gene39813.t1 AT1G69440 31.081 888 524 30 47 902 158 989 4.19e-115 376
MS.gene39813.t1 AT1G31290 30.331 877 504 31 27 857 250 1065 9.32e-96 326
MS.gene39813.t1 AT1G31290 30.331 877 504 31 27 857 288 1103 1.81e-95 325
MS.gene39813.t1 AT1G31290 30.331 877 504 31 27 857 324 1139 2.28e-95 326
MS.gene39813.t1 AT1G31280 29.345 886 515 30 15 855 138 957 2.83e-95 322

Find 234 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGCTCCTACTCTCATTT+TGG 0.125101 5.4:+69142867 MS.gene39813:CDS
GAAGTTCCATCTCCCATTTC+TGG 0.140891 5.4:-69142023 None:intergenic
GGCAACAATGACCAGAAATT+TGG 0.175820 5.4:-69143895 None:intergenic
GCAGACATTGTCCATCAATT+TGG 0.191316 5.4:-69144818 None:intergenic
GCCATCGCTAATGCCTTAAA+AGG 0.218227 5.4:+69139590 MS.gene39813:CDS
AAAGTGGAACCCCAAATTTC+TGG 0.256220 5.4:+69143884 MS.gene39813:CDS
TTTGACTTACAGTTGAAGTT+TGG 0.257080 5.4:+69141980 MS.gene39813:intron
ACTTATGGTTCTGAGCTTAA+TGG 0.263665 5.4:+69139248 MS.gene39813:CDS
AACTCATTATCATGTCCTTT+TGG 0.270857 5.4:+69144379 MS.gene39813:CDS
CCAGCACCCTTTCCTTCAAC+AGG 0.279192 5.4:-69139197 None:intergenic
TCATCCTCCTTATCTGATAC+TGG 0.280966 5.4:-69143157 None:intergenic
GATCATTGTGGAAGAAATTC+TGG 0.281342 5.4:-69139790 None:intergenic
AGCATCTAAGTTACCTCAAC+TGG 0.285402 5.4:-69140585 None:intergenic
AGAATTATCAAGAAGCGATT+AGG 0.292990 5.4:+69139624 MS.gene39813:CDS
CCTACATCCGTGAAATTCTT+AGG 0.297424 5.4:-69139812 None:intergenic
AGGAAGAACTCTGATCTTTA+TGG 0.298034 5.4:+69142482 MS.gene39813:CDS
CAGACATTGTCCATCAATTT+GGG 0.298038 5.4:-69144817 None:intergenic
TTTCAGTCTTGACTGGAATA+AGG 0.302768 5.4:+69140064 MS.gene39813:CDS
AACCAAGAGTACAAAATTAC+TGG 0.311607 5.4:+69140254 MS.gene39813:CDS
ATTTGACAACCTCAATGATT+TGG 0.317059 5.4:-69143775 None:intergenic
GGCCCTTGATATCTAAATAT+AGG 0.320167 5.4:+69143080 MS.gene39813:CDS
GACAGAGTTCAAGAAACTTA+TGG 0.329511 5.4:+69139233 MS.gene39813:CDS
TGAAAGGATCTCTCACATTC+TGG 0.330147 5.4:-69140046 None:intergenic
GCAACAATGACCAGAAATTT+GGG 0.334787 5.4:-69143894 None:intergenic
GAGGGCTGCATTCCAGCTTC+AGG 0.336895 5.4:+69139855 MS.gene39813:CDS
CTCTTCCTGTCAGTATCATT+TGG 0.339440 5.4:-69139497 None:intergenic
GCCCTTGATATCTAAATATA+GGG 0.341173 5.4:+69143081 MS.gene39813:CDS
TCCAATCTGCTATGCCCATT+TGG 0.342609 5.4:+69144687 MS.gene39813:CDS
CTTATGGTTCTGAGCTTAAT+GGG 0.348524 5.4:+69139249 MS.gene39813:CDS
GAGGTGGTGCACGCCTAAAC+TGG 0.353469 5.4:-69142376 None:intergenic
CCCACAGTTGCCCAAATTGA+TGG 0.357282 5.4:+69144807 MS.gene39813:CDS
GGGACAAATGTTGGTCGCTT+TGG 0.358126 5.4:-69140564 None:intergenic
GCTGGGACAATGGGAGGTGG+CGG 0.363377 5.4:-69138873 None:intergenic
TTGACTTACAGTTGAAGTTT+GGG 0.363727 5.4:+69141981 MS.gene39813:intron
TCCAATGGCAAGACGTGGAC+TGG 0.366638 5.4:+69138956 MS.gene39813:CDS
AACCTGTTAAAATAGAGAAA+TGG 0.366755 5.4:+69142155 MS.gene39813:CDS
CTCAGTGTATTGCTCCTACC+AGG 0.367615 5.4:+69142635 MS.gene39813:CDS
AAAGCTGATTTCAACTTTGT+AGG 0.368467 5.4:-69139546 None:intergenic
ACTTTGTGTGATGATTCTTC+TGG 0.369516 5.4:-69143917 None:intergenic
CTGGGACAATGGGAGGTGGC+GGG 0.381536 5.4:-69138872 None:intergenic
TGGGACAATGGGAGGTGGCG+GGG 0.382310 5.4:-69138871 None:intergenic
TTGAAGTGTGGACAGGGCTT+TGG 0.383459 5.4:-69141181 None:intergenic
CTGAAAATTATGATATTGTC+TGG 0.384283 5.4:-69143527 None:intergenic
GGGACAATGGGAGGTGGCGG+GGG 0.384708 5.4:-69138870 None:intergenic
GCAAATTTCTTGATGAAAAG+TGG 0.388890 5.4:+69143868 MS.gene39813:CDS
GAGAAGACTCTGTTTACTAT+TGG 0.391306 5.4:+69139293 MS.gene39813:CDS
TGCCCTATATTTAGATATCA+AGG 0.395995 5.4:-69143083 None:intergenic
AAGAAGAGAGGTGCTGTTCC+CGG 0.396470 5.4:+69140438 MS.gene39813:CDS
GAATTATCAAGAAGCGATTA+GGG 0.397722 5.4:+69139625 MS.gene39813:CDS
TTGAAGAAAACGGCCAGTTT+AGG 0.399457 5.4:+69142363 MS.gene39813:CDS
GAAGACTTCAATCCCAGAAA+TGG 0.400873 5.4:+69142010 MS.gene39813:CDS
AAGTTCCATCTCCCATTTCT+GGG 0.401631 5.4:-69142022 None:intergenic
TTGATTGGTTCAAGATCTGC+TGG 0.409933 5.4:-69138891 None:intergenic
ACCTGTTAAAATAGAGAAAT+GGG 0.413540 5.4:+69142156 MS.gene39813:CDS
AGAAGCCACAAGAGCGGATG+AGG 0.415926 5.4:+69141232 MS.gene39813:CDS
ACTTTGTGTGGTCCTGAAGC+TGG 0.418099 5.4:-69139867 None:intergenic
AGGAGGATGAAGGAATAATA+AGG 0.420217 5.4:+69143170 MS.gene39813:CDS
CATGTAGAAATCATAATTCC+GGG 0.422697 5.4:-69144100 None:intergenic
GATGTAGGAGGTGGTGTTCT+TGG 0.424732 5.4:+69139827 MS.gene39813:CDS
TTTGGACTTCCATGTCCATC+AGG 0.425248 5.4:-69139479 None:intergenic
TTTGATTGCTTTGAAGAAAA+CGG 0.426012 5.4:+69142353 MS.gene39813:CDS
AGTGGGCTGTCTTTGAATAT+AGG 0.426346 5.4:+69139887 MS.gene39813:CDS
AAAGGACTCTAAAGAATTTG+AGG 0.426856 5.4:+69140213 MS.gene39813:CDS
TATTATTACCGCAGCAATTG+AGG 0.427660 5.4:-69142932 None:intergenic
GGGAAAGACCTTGCGTATGA+TGG 0.430816 5.4:+69139269 MS.gene39813:CDS
ACATGTAGAAATCATAATTC+CGG 0.431069 5.4:-69144101 None:intergenic
TCACCAGGAGGCACATTATC+CGG 0.432944 5.4:-69143957 None:intergenic
TGTGGAATTTCAATAACATC+TGG 0.434716 5.4:+69141391 MS.gene39813:CDS
TTGAAGATGTCACTTCAAAC+AGG 0.437609 5.4:+69139354 MS.gene39813:CDS
CAACCTTAGCACCCTGAGTT+CGG 0.437681 5.4:-69143111 None:intergenic
CTCCTCTGTATCATCTTCTC+CGG 0.438923 5.4:-69140457 None:intergenic
CTTTGTGTGATGATTCTTCT+GGG 0.439440 5.4:-69143916 None:intergenic
GCAAAACATTGGTCAGATAC+TGG 0.446295 5.4:-69142666 None:intergenic
AGGCATTAGCGATGGCCTGC+AGG 0.446982 5.4:-69139583 None:intergenic
GTTCTTCCAGCCTGGATCTC+CGG 0.448860 5.4:+69143938 MS.gene39813:CDS
GTTTAGGCGTGCACCACCTC+TGG 0.450520 5.4:+69142379 MS.gene39813:CDS
CCACTTGAGAAGCAGCCAAA+TGG 0.455401 5.4:-69144702 None:intergenic
TCAGTTCAATGTTCAAAACT+TGG 0.460356 5.4:-69143751 None:intergenic
CACTTGAGAAGCAGCCAAAT+GGG 0.461002 5.4:-69144701 None:intergenic
TGCCTCAAAGATTCCCCTGC+AGG 0.463684 5.4:+69139568 MS.gene39813:CDS
ATACGATACTTACACTGTAC+TGG 0.463901 5.4:-69139055 None:intergenic
TCAAGATCTGCTGGGACAAT+GGG 0.464708 5.4:-69138882 None:intergenic
TTCAAGATCTGCTGGGACAA+TGG 0.465092 5.4:-69138883 None:intergenic
GAAGATGGACGCCCTGTTGA+AGG 0.466191 5.4:+69139185 MS.gene39813:intron
GGGCTTTGGTATAGCGTTGA+AGG 0.467408 5.4:-69141167 None:intergenic
TAGGGCATGCGTCCGAACTC+AGG 0.467508 5.4:+69143099 MS.gene39813:CDS
GAGATCCTTTCAGTCTTGAC+TGG 0.474223 5.4:+69140057 MS.gene39813:CDS
CCATTTGGCTGCTTCTCAAG+TGG 0.476182 5.4:+69144702 MS.gene39813:CDS
AAGTCCTCGCACATCACAAC+GGG 0.476378 5.4:-69142197 None:intergenic
GGCATTAGCGATGGCCTGCA+GGG 0.477897 5.4:-69139582 None:intergenic
TTCTACATGTGTGCTCATGC+TGG 0.479915 5.4:+69144114 MS.gene39813:CDS
GGCACATTATCCGGAGATCC+AGG 0.482891 5.4:-69143948 None:intergenic
TTGGGCATGGATGTTTCTCA+TGG 0.483692 5.4:+69142886 MS.gene39813:CDS
AGCAGACAAAGGAGAAACTT+AGG 0.485208 5.4:-69142452 None:intergenic
CACGTTCAGTCTAAACTACC+AGG 0.486546 5.4:+69142425 MS.gene39813:CDS
GGAAAGACCTTGCGTATGAT+GGG 0.488113 5.4:+69139270 MS.gene39813:CDS
ACAACCATGATTGTTCATCC+TGG 0.488945 5.4:+69139996 MS.gene39813:CDS
CCCAGTCCACGTCTTGCCAT+TGG 0.492747 5.4:-69138957 None:intergenic
GCAATCAAGAAATCAACAAC+AGG 0.494682 5.4:-69140020 None:intergenic
AGATCAGAGTTCTTCCTCTC+AGG 0.495404 5.4:-69142476 None:intergenic
CACACAAAGTTCTTCCAGCC+TGG 0.495690 5.4:+69143930 MS.gene39813:CDS
ATCTGCCATGTATTAATGTT+GGG 0.495725 5.4:+69140538 MS.gene39813:CDS
GGCCTGCAGGGGAATCTTTG+AGG 0.495878 5.4:-69139570 None:intergenic
AAGACTTCAATCCCAGAAAT+GGG 0.497285 5.4:+69142011 MS.gene39813:CDS
CATTTGGCTGCTTCTCAAGT+GGG 0.502960 5.4:+69144703 MS.gene39813:CDS
ACGTCTTGCCATTGGAACCT+TGG 0.505019 5.4:-69138949 None:intergenic
GCCAAATGGGCATAGCAGAT+TGG 0.505414 5.4:-69144688 None:intergenic
ATTATTACCGCAGCAATTGA+GGG 0.505728 5.4:-69142931 None:intergenic
ATGATAATGAGTTGGCCTAC+TGG 0.506108 5.4:-69144369 None:intergenic
CCAATGGCAAGACGTGGACT+GGG 0.506992 5.4:+69138957 MS.gene39813:CDS
AAGATCTTTGAAGTGTGGAC+AGG 0.507876 5.4:-69141188 None:intergenic
GAGGGAATTTCAGTTTGTCC+AGG 0.509678 5.4:-69142913 None:intergenic
ATTTGAAATGTGAAGGTCCA+TGG 0.512015 5.4:+69142578 MS.gene39813:intron
AATTCCACAGTTACGTAGCA+TGG 0.513797 5.4:-69141377 None:intergenic
CAATGATCCTAAGAATTTCA+CGG 0.514283 5.4:+69139805 MS.gene39813:CDS
CCTGTTGAAGGAAAGGGTGC+TGG 0.514545 5.4:+69139197 MS.gene39813:CDS
GTGTGCGGCTCAATCTTGAT+TGG 0.516796 5.4:-69138906 None:intergenic
CTTGCCATTGGAACCTTGGT+GGG 0.516809 5.4:-69138945 None:intergenic
CAACTTTGTAGGTCTTTGAT+CGG 0.519218 5.4:-69139535 None:intergenic
ACAAGCTCTTGAAGATCATC+CGG 0.524005 5.4:-69144419 None:intergenic
AAAAGCCAATCTCATCCAAA+AGG 0.525339 5.4:-69144394 None:intergenic
CATTATCCGGAGATCCAGGC+TGG 0.525864 5.4:-69143944 None:intergenic
TCCATCAATTTGGGCAACTG+TGG 0.526082 5.4:-69144808 None:intergenic
AATTTGGGCAACTGTGGGAT+GGG 0.530026 5.4:-69144802 None:intergenic
TCTTGCCATTGGAACCTTGG+TGG 0.530951 5.4:-69138946 None:intergenic
TTTGAAACAATAGGGATGGA+TGG 0.531152 5.4:-69142847 None:intergenic
AAGACCCTCATCCGCTCTTG+TGG 0.532758 5.4:-69141237 None:intergenic
CCTAAGAATTTCACGGATGT+AGG 0.535096 5.4:+69139812 MS.gene39813:CDS
GGGCAACTGTGGGATGGGAG+AGG 0.535595 5.4:-69144797 None:intergenic
CAATTTGGGCAACTGTGGGA+TGG 0.535890 5.4:-69144803 None:intergenic
CAACCATGATTGTTCATCCT+GGG 0.535985 5.4:+69139997 MS.gene39813:CDS
ATAAAATGTGGAGGAATGAA+AGG 0.536134 5.4:+69142232 MS.gene39813:CDS
AACGGGAATGCTAGCCCTGA+TGG 0.537473 5.4:+69139464 MS.gene39813:CDS
CAAATGATACTGACAGGAAG+AGG 0.538365 5.4:+69139498 MS.gene39813:CDS
TCCTCTGTATCATCTTCTCC+GGG 0.538643 5.4:-69140456 None:intergenic
AAGAAATCAACAACAGGCCC+AGG 0.539326 5.4:-69140014 None:intergenic
GATCTGCCATGTATTAATGT+TGG 0.539536 5.4:+69140537 MS.gene39813:CDS
GGCTTCCCAACATTAATACA+TGG 0.539567 5.4:-69140543 None:intergenic
CGTCCGAACTCAGGGTGCTA+AGG 0.540192 5.4:+69143108 MS.gene39813:CDS
GGACGCCCTGTTGAAGGAAA+GGG 0.541901 5.4:+69139191 MS.gene39813:CDS
GTGATGTGCGAGGACTTGTA+AGG 0.542125 5.4:+69142203 MS.gene39813:CDS
GGTGGTGTTCTTGGATGCAG+AGG 0.543916 5.4:+69139836 MS.gene39813:CDS
AGACGTGGACTGGGCTCGAA+GGG 0.544606 5.4:+69138966 MS.gene39813:CDS
GATGTTTCTCATGGTTCACC+TGG 0.546335 5.4:+69142895 MS.gene39813:CDS
GAAGTCCAAATGATACTGAC+AGG 0.546381 5.4:+69139492 MS.gene39813:CDS
CTTCCCTTGTGGAAAAGTCT+AGG 0.546591 5.4:+69141208 MS.gene39813:CDS
ATTGATCTTCAGCAAAACAT+TGG 0.550562 5.4:-69142677 None:intergenic
ACCTCAACTGGGACAAATGT+TGG 0.553100 5.4:-69140573 None:intergenic
TCTGGCTTCACACAAGTTGA+CGG 0.553294 5.4:+69141409 MS.gene39813:CDS
AGGAGAAACTTAGGAGCCCC+TGG 0.553396 5.4:-69142443 None:intergenic
AAGACGTGGACTGGGCTCGA+AGG 0.553897 5.4:+69138965 MS.gene39813:CDS
TTGAAGGAAAGGGTGCTGGC+AGG 0.554011 5.4:+69139201 MS.gene39813:CDS
TGGACGCCCTGTTGAAGGAA+AGG 0.554101 5.4:+69139190 MS.gene39813:CDS
TCATCTAGCCATGGTGGCAG+CGG 0.556067 5.4:+69144760 MS.gene39813:CDS
ACCAACATTTGTCCCAGTTG+AGG 0.559402 5.4:+69140572 MS.gene39813:CDS
TGAACTGAGCCAAATCATTG+AGG 0.559983 5.4:+69143766 MS.gene39813:CDS
TATTACAGGTTGTAAGCTCA+AGG 0.560495 5.4:+69143053 MS.gene39813:intron
CCATCGCTAATGCCTTAAAA+GGG 0.560542 5.4:+69139591 MS.gene39813:CDS
AGTACTACTGCTATCTCTGT+TGG 0.560841 5.4:+69144580 MS.gene39813:CDS
AAAAGGACATGATAATGAGT+TGG 0.562000 5.4:-69144377 None:intergenic
AGATCTTTGAAGTGTGGACA+GGG 0.563749 5.4:-69141187 None:intergenic
TATCACGACCGCTGCCACCA+TGG 0.564045 5.4:-69144768 None:intergenic
TCCTTTGTCTGCTTCCTGAG+AGG 0.565365 5.4:+69142462 MS.gene39813:CDS
AGGGCATGCGTCCGAACTCA+GGG 0.566072 5.4:+69143100 MS.gene39813:CDS
AATTACAGCTGGTCTTTGCA+AGG 0.567257 5.4:-69140290 None:intergenic
AATGCTAGCCCTGATGGACA+TGG 0.567961 5.4:+69139470 MS.gene39813:CDS
GCTTCCCACCAAGGTTCCAA+TGG 0.568344 5.4:+69138941 MS.gene39813:CDS
CAGATACTGGTCGTTCACCC+TGG 0.568760 5.4:-69142653 None:intergenic
TTACAGTTGAAGTTTGGGAA+TGG 0.569594 5.4:+69141986 MS.gene39813:intron
AGAGCGGATGAGGGTCTTGA+CGG 0.569768 5.4:+69141242 MS.gene39813:CDS
AGCTTCAGGACCACACAAAG+TGG 0.572451 5.4:+69139869 MS.gene39813:CDS
TCTGCTGGGACAATGGGAGG+TGG 0.576180 5.4:-69138876 None:intergenic
GGCTTTGGTATAGCGTTGAA+GGG 0.578616 5.4:-69141166 None:intergenic
TTCTTGACCACAGGTATCAG+AGG 0.579041 5.4:+69144557 MS.gene39813:intron
GTTCAAGCCAGTATCAGATA+AGG 0.579234 5.4:+69143150 MS.gene39813:CDS
CAAAGACAGCCCACTTTGTG+TGG 0.579631 5.4:-69139879 None:intergenic
CTGGCTTCACACAAGTTGAC+GGG 0.580131 5.4:+69141410 MS.gene39813:CDS
AAGAATTTCACGGATGTAGG+AGG 0.581022 5.4:+69139815 MS.gene39813:CDS
GTGGTGTTCTTGGATGCAGA+GGG 0.581678 5.4:+69139837 MS.gene39813:CDS
TCAATCCCAGAAATGGGAGA+TGG 0.583790 5.4:+69142017 MS.gene39813:CDS
TTATTCCAGTCAAGACTGAA+AGG 0.584520 5.4:-69140062 None:intergenic
CATAACTCAAACAAAGAACA+TGG 0.585795 5.4:-69144845 None:intergenic
AGGCCCAGGATGAACAATCA+TGG 0.587236 5.4:-69140000 None:intergenic
GTATCAGATAAGGAGGATGA+AGG 0.587451 5.4:+69143160 MS.gene39813:CDS
CTTCACACAAGTTGACGGGA+GGG 0.588682 5.4:+69141414 MS.gene39813:CDS
AGGTTGTAAGCTCAAGGCAA+TGG 0.590895 5.4:+69143059 MS.gene39813:intron
TCCTCTCAGGAAGCAGACAA+AGG 0.594522 5.4:-69142463 None:intergenic
ATTCCACAGTTACGTAGCAT+GGG 0.595866 5.4:-69141376 None:intergenic
CAGCACCCTTTCCTTCAACA+GGG 0.596872 5.4:-69139196 None:intergenic
TGAAATTCTTAGGATCATTG+TGG 0.598281 5.4:-69139802 None:intergenic
TTGGACTTCCATGTCCATCA+GGG 0.598571 5.4:-69139478 None:intergenic
TCTCCGGATAATGTGCCTCC+TGG 0.601087 5.4:+69143954 MS.gene39813:CDS
GTAAGGGATCTGATAAAATG+TGG 0.602054 5.4:+69142220 MS.gene39813:CDS
TTGAAGTGATTTGTAAGCAG+AGG 0.603076 5.4:-69138999 None:intergenic
AATTTCACGGATGTAGGAGG+TGG 0.603434 5.4:+69139818 MS.gene39813:CDS
AGATCTGCTGGGACAATGGG+AGG 0.605354 5.4:-69138879 None:intergenic
GTGAATGTTACTAACACTGA+TGG 0.607814 5.4:+69139023 MS.gene39813:CDS
GCCCTATATTTAGATATCAA+GGG 0.609362 5.4:-69143082 None:intergenic
ACAACAAAATCTGTCATCCC+CGG 0.609557 5.4:+69144082 MS.gene39813:CDS
CCATCAATTTGGGCAACTGT+GGG 0.610368 5.4:-69144807 None:intergenic
CAAGCCAGTATCAGATAAGG+AGG 0.610634 5.4:+69143153 MS.gene39813:CDS
TCCATGCCCAAAATGAGAGT+AGG 0.612941 5.4:-69142874 None:intergenic
ACTTCAAAGATCTTCCCTTG+TGG 0.614391 5.4:+69141197 MS.gene39813:CDS
TGATTGGTTCAAGATCTGCT+GGG 0.616640 5.4:-69138890 None:intergenic
TTTGCTGAAGATCAATGCAA+AGG 0.619675 5.4:+69142684 MS.gene39813:CDS
TCAGTGTATTGCTCCTACCA+GGG 0.624276 5.4:+69142636 MS.gene39813:CDS
TCTTCTCCCCATCATACGCA+AGG 0.627331 5.4:-69139277 None:intergenic
TCTGAAACTTCATCTAGCCA+TGG 0.629684 5.4:+69144751 MS.gene39813:CDS
GCTTCACACAAGTTGACGGG+AGG 0.630138 5.4:+69141413 MS.gene39813:CDS
AAGGGAAGATCTTTGAAGTG+TGG 0.633197 5.4:-69141193 None:intergenic
GAGCCCATGCTACGTAACTG+TGG 0.634775 5.4:+69141373 MS.gene39813:CDS
TAAAATAGAGAAATGGGCTG+TGG 0.646383 5.4:+69142162 MS.gene39813:CDS
TCTGCCCGTTGTGATGTGCG+AGG 0.647167 5.4:+69142193 MS.gene39813:CDS
GCATCTAAGTTACCTCAACT+GGG 0.647864 5.4:-69140584 None:intergenic
CTAGGCAGAAGCCACAAGAG+CGG 0.652116 5.4:+69141226 MS.gene39813:CDS
GCATTAGCGATGGCCTGCAG+GGG 0.658024 5.4:-69139581 None:intergenic
GCTTCAGGACCACACAAAGT+GGG 0.658254 5.4:+69139870 MS.gene39813:CDS
AGGGATCTGATAAAATGTGG+AGG 0.659465 5.4:+69142223 MS.gene39813:CDS
TGAAATTCCCTCAATTGCTG+CGG 0.660780 5.4:+69142924 MS.gene39813:CDS
ACGTTCAGTCTAAACTACCA+GGG 0.661828 5.4:+69142426 MS.gene39813:CDS
AAGGTTCCAATGGCAAGACG+TGG 0.662015 5.4:+69138951 MS.gene39813:CDS
TCTGTTCTCAGGGTACCAGT+AGG 0.664166 5.4:+69144354 MS.gene39813:intron
GAAGCCACAAGAGCGGATGA+GGG 0.664428 5.4:+69141233 MS.gene39813:CDS
CAACAATGACCAGAAATTTG+GGG 0.665264 5.4:-69143893 None:intergenic
GAAAGACCTTGCGTATGATG+GGG 0.671091 5.4:+69139271 MS.gene39813:CDS
CAAGTCCTCGCACATCACAA+CGG 0.675833 5.4:-69142198 None:intergenic
AGGTTCACTCTGAAGAAGAG+AGG 0.677143 5.4:+69140426 MS.gene39813:intron
CGTTCAGTCTAAACTACCAG+GGG 0.678350 5.4:+69142427 MS.gene39813:CDS
TACTGGTCGTTCACCCTGGT+AGG 0.679221 5.4:-69142649 None:intergenic
GAAACTTCATCTAGCCATGG+TGG 0.683294 5.4:+69144754 MS.gene39813:CDS
TGATGTGCGAGGACTTGTAA+GGG 0.687534 5.4:+69142204 MS.gene39813:CDS
ATGTAGAAATCATAATTCCG+GGG 0.690302 5.4:-69144099 None:intergenic
TCCCGGAGAAGATGATACAG+AGG 0.691539 5.4:+69140455 MS.gene39813:CDS
GAGATGGAACTTCAATAACA+AGG 0.719372 5.4:+69142033 MS.gene39813:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACATTTATAATAATGAA+AGG - chr5.4:69139695-69139714 None:intergenic 10.0%
!! CAACTTTATATATAAAATAA+TGG - chr5.4:69144010-69144029 None:intergenic 10.0%
!! TTTCAAATAAAATTTCATTA+AGG - chr5.4:69142566-69142585 None:intergenic 10.0%
!!! CATTATTTTATATATAAAGT+TGG + chr5.4:69144008-69144027 MS.gene39813:intron 10.0%
!! ACATAAATTTCATCAAATAA+TGG - chr5.4:69141677-69141696 None:intergenic 15.0%
!! ATATGGAAAATAATATTTCA+AGG - chr5.4:69143218-69143237 None:intergenic 15.0%
!! TACACAAATAAAATATACAA+AGG - chr5.4:69140188-69140207 None:intergenic 15.0%
!!! AAATTTTATTTGAAATGTGA+AGG + chr5.4:69142571-69142590 MS.gene39813:intron 15.0%
!!! AGTAAGTATTTTTCTTAAAT+AGG - chr5.4:69140801-69140820 None:intergenic 15.0%
!!! ATCTTATTCTTTTAAATTCT+AGG + chr5.4:69143842-69143861 MS.gene39813:intron 15.0%
!!! ATTGATTTTTATAATAGTTC+TGG + chr5.4:69143494-69143513 MS.gene39813:CDS 15.0%
!!! TATTATTTTCCATATCTATT+TGG + chr5.4:69143223-69143242 MS.gene39813:intron 15.0%
!!! TTGATTTTTATAATAGTTCT+GGG + chr5.4:69143495-69143514 MS.gene39813:CDS 15.0%
!!! TTTGTATATTTTATTTGTGT+AGG + chr5.4:69140187-69140206 MS.gene39813:intron 15.0%
!! AAGTAGGTTAATTAATTCAT+TGG - chr5.4:69141040-69141059 None:intergenic 20.0%
!! AATAAAATATACAAAGGATC+AGG - chr5.4:69140182-69140201 None:intergenic 20.0%
!! ACAATTCCAAACATTAAAAA+TGG - chr5.4:69140347-69140366 None:intergenic 20.0%
!! ATTACATATGTATAATCTTG+CGG + chr5.4:69143343-69143362 MS.gene39813:intron 20.0%
!! CATATTTGAAAAGAATTGAA+GGG + chr5.4:69140755-69140774 MS.gene39813:intron 20.0%
!! GAAAATAATATTTCAAGGAA+AGG - chr5.4:69143213-69143232 None:intergenic 20.0%
!! GATAATATAAAAGAAACCAA+AGG - chr5.4:69142723-69142742 None:intergenic 20.0%
!! GTAATACAACAATCTAAAAA+TGG - chr5.4:69143328-69143347 None:intergenic 20.0%
!! TAAATATATGATTGCTTACT+TGG + chr5.4:69143811-69143830 MS.gene39813:intron 20.0%
!! TCAGCTATTATGTATAATTT+AGG + chr5.4:69140675-69140694 MS.gene39813:intron 20.0%
!! TCATTACTTTGTATTTGTTT+AGG + chr5.4:69139148-69139167 MS.gene39813:intron 20.0%
!!! AATGTTGTATTTTATGGTTT+CGG + chr5.4:69142976-69142995 MS.gene39813:intron 20.0%
!!! ATAAGCTAATACACAATTTT+AGG - chr5.4:69140631-69140650 None:intergenic 20.0%
!!! ATGGATCTTTTTTCTTAAAA+AGG - chr5.4:69143309-69143328 None:intergenic 20.0%
!!! CTGCTTTTATTATTGTTTTT+TGG + chr5.4:69141459-69141478 MS.gene39813:intron 20.0%
!!! GATCTACATTTTTAATTTTC+TGG + chr5.4:69142072-69142091 MS.gene39813:intron 20.0%
!!! GCTATTAATGTTGTATTTTA+TGG + chr5.4:69142970-69142989 MS.gene39813:intron 20.0%
!!! TTGATGGCTTAATTTATTTT+TGG + chr5.4:69143440-69143459 MS.gene39813:intron 20.0%
! AAAAAGCAAACAAAACAGAA+TGG - chr5.4:69142314-69142333 None:intergenic 25.0%
! AAATAATGGTGAATAGCAAT+GGG - chr5.4:69141663-69141682 None:intergenic 25.0%
! AACCTGTTAAAATAGAGAAA+TGG + chr5.4:69142155-69142174 MS.gene39813:CDS 25.0%
! AAGAAAAGAAAACAGAAAGT+AGG - chr5.4:69141056-69141075 None:intergenic 25.0%
! AATAAGTCGAAGAAATAGAA+TGG - chr5.4:69143576-69143595 None:intergenic 25.0%
! AATATCTTTGAATACAGATG+TGG - chr5.4:69143250-69143269 None:intergenic 25.0%
! ACAACCAGGAAAAAAAAATA+AGG - chr5.4:69141490-69141509 None:intergenic 25.0%
! ACATCTGTATTCAAAGATAT+TGG + chr5.4:69143249-69143268 MS.gene39813:intron 25.0%
! ACATGTAGAAATCATAATTC+CGG - chr5.4:69144104-69144123 None:intergenic 25.0%
! ACCTGTTAAAATAGAGAAAT+GGG + chr5.4:69142156-69142175 MS.gene39813:CDS 25.0%
! ACTCATACATAATTGAGAAA+AGG + chr5.4:69140853-69140872 MS.gene39813:intron 25.0%
! CACAACTAAAATAAGTATCA+TGG - chr5.4:69144330-69144349 None:intergenic 25.0%
! CACCTTATCTACATTAAATA+CGG - chr5.4:69140993-69141012 None:intergenic 25.0%
! CATGATAATTGCAAACAAAA+AGG - chr5.4:69144291-69144310 None:intergenic 25.0%
! CATTAAGGAAATCAAACAAA+TGG - chr5.4:69142551-69142570 None:intergenic 25.0%
! CCATATTTGAAAAGAATTGA+AGG + chr5.4:69140754-69140773 MS.gene39813:intron 25.0%
! CTGAAAATTATGATATTGTC+TGG - chr5.4:69143530-69143549 None:intergenic 25.0%
! CTGCAAAACCAAAAAAAATA+TGG - chr5.4:69144050-69144069 None:intergenic 25.0%
! GAAATAGAATGGTAGAAAAT+TGG - chr5.4:69143565-69143584 None:intergenic 25.0%
! GTAAGCAATCATATATTTAC+AGG - chr5.4:69143810-69143829 None:intergenic 25.0%
! TGTGAATGCTTAAATATTAC+AGG + chr5.4:69143039-69143058 MS.gene39813:intron 25.0%
! TTTGTTTGAATTATGTTTCC+TGG + chr5.4:69144483-69144502 MS.gene39813:intron 25.0%
!! CAAAAAAAATATGGTTAGCT+AGG - chr5.4:69144041-69144060 None:intergenic 25.0%
!! CAGACAATATCATAATTTTC+AGG + chr5.4:69143528-69143547 MS.gene39813:CDS 25.0%
!! CCTTCAATTCTTTTCAAATA+TGG - chr5.4:69140757-69140776 None:intergenic 25.0%
!! GATTTTATTCTTTTGTAGCT+TGG + chr5.4:69142790-69142809 MS.gene39813:intron 25.0%
!! GTTGTTATTAATGAAGATGT+TGG + chr5.4:69140397-69140416 MS.gene39813:intron 25.0%
!! TTACAAAAAGGTATATAGCA+TGG - chr5.4:69142527-69142546 None:intergenic 25.0%
!! TTTTCTTCAAAGCAATCAAA+AGG - chr5.4:69142353-69142372 None:intergenic 25.0%
!!! AATATTATTTGCTGTTTTGC+AGG + chr5.4:69141324-69141343 MS.gene39813:intron 25.0%
!!! ATTTAACTTGACCTTTTTTC+AGG + chr5.4:69139438-69139457 MS.gene39813:intron 25.0%
!!! CAAACAAATGGATTACAAAA+AGG - chr5.4:69142539-69142558 None:intergenic 25.0%
!!! CATATTTTTTTTGGTTTTGC+AGG + chr5.4:69144048-69144067 MS.gene39813:intron 25.0%
!!! CATTCCTTATTTTTTTTTCC+TGG + chr5.4:69141483-69141502 MS.gene39813:intron 25.0%
!!! CTAGCTAACCATATTTTTTT+TGG + chr5.4:69144039-69144058 MS.gene39813:intron 25.0%
!!! CTTTTTGTTTGCAATTATCA+TGG + chr5.4:69144289-69144308 MS.gene39813:intron 25.0%
!!! GATGTATGCTTTTGAAATTT+GGG + chr5.4:69139389-69139408 MS.gene39813:intron 25.0%
!!! GCTTAATTTATTTTTGGAGT+TGG + chr5.4:69143446-69143465 MS.gene39813:intron 25.0%
!!! GTTAACCATTGATTTTCATT+TGG + chr5.4:69144262-69144281 MS.gene39813:intron 25.0%
!!! TCTTTTGTTGAGTTATTTTC+AGG + chr5.4:69141540-69141559 MS.gene39813:intron 25.0%
!!! TTTGATTGCTTTGAAGAAAA+CGG + chr5.4:69142353-69142372 MS.gene39813:CDS 25.0%
!!! TTTTATTTGTGTAGGCTAAA+AGG + chr5.4:69140195-69140214 MS.gene39813:intron 25.0%
AAAAAGAATCTTGCAGAGTT+TGG + chr5.4:69142604-69142623 MS.gene39813:CDS 30.0%
AATGAAGATGTTGGTATTGT+AGG + chr5.4:69140406-69140425 MS.gene39813:intron 30.0%
ACTAACAGCTTCTCAATAAA+GGG - chr5.4:69141519-69141538 None:intergenic 30.0%
AGAATTATCAAGAAGCGATT+AGG + chr5.4:69139624-69139643 MS.gene39813:CDS 30.0%
ATAAAATGTGGAGGAATGAA+AGG + chr5.4:69142232-69142251 MS.gene39813:CDS 30.0%
ATATATGATTGCTTACTTGG+TGG + chr5.4:69143814-69143833 MS.gene39813:intron 30.0%
ATCTGCCATGTATTAATGTT+GGG + chr5.4:69140538-69140557 MS.gene39813:CDS 30.0%
ATGTAGAAATCATAATTCCG+GGG - chr5.4:69144102-69144121 None:intergenic 30.0%
ATTGATCTTCAGCAAAACAT+TGG - chr5.4:69142680-69142699 None:intergenic 30.0%
ATTTACTGACAAGCATAGAA+AGG + chr5.4:69142280-69142299 MS.gene39813:intron 30.0%
ATTTGACAACCTCAATGATT+TGG - chr5.4:69143778-69143797 None:intergenic 30.0%
CAAATAATGGTGAATAGCAA+TGG - chr5.4:69141664-69141683 None:intergenic 30.0%
CAATGATCCTAAGAATTTCA+CGG + chr5.4:69139805-69139824 MS.gene39813:CDS 30.0%
CAGCAAAAAGGAATAAAGTT+CGG - chr5.4:69143694-69143713 None:intergenic 30.0%
CATGTAGAAATCATAATTCC+GGG - chr5.4:69144103-69144122 None:intergenic 30.0%
CTCCGTATTTAATGTAGATA+AGG + chr5.4:69140988-69141007 MS.gene39813:intron 30.0%
CTTTGTAATAATCTACTGCA+GGG + chr5.4:69139751-69139770 MS.gene39813:intron 30.0%
GAATTATCAAGAAGCGATTA+GGG + chr5.4:69139625-69139644 MS.gene39813:CDS 30.0%
GCAAATTTCTTGATGAAAAG+TGG + chr5.4:69143868-69143887 MS.gene39813:CDS 30.0%
GCCCTATATTTAGATATCAA+GGG - chr5.4:69143085-69143104 None:intergenic 30.0%
GCCCTTGATATCTAAATATA+GGG + chr5.4:69143081-69143100 MS.gene39813:CDS 30.0%
GGATTCCAAATGAAAATCAA+TGG - chr5.4:69144270-69144289 None:intergenic 30.0%
TAATAAAAGCAGAATACCCT+AGG - chr5.4:69141451-69141470 None:intergenic 30.0%
TACTAACAGCTTCTCAATAA+AGG - chr5.4:69141520-69141539 None:intergenic 30.0%
TATATGATTGCTTACTTGGT+GGG + chr5.4:69143815-69143834 MS.gene39813:intron 30.0%
TCAGTTCAATGTTCAAAACT+TGG - chr5.4:69143754-69143773 None:intergenic 30.0%
TCCTTTCGTACTAAAATTGA+AGG + chr5.4:69142768-69142787 MS.gene39813:intron 30.0%
TCTTTGTAATAATCTACTGC+AGG + chr5.4:69139750-69139769 MS.gene39813:intron 30.0%
TGAAATTCTTAGGATCATTG+TGG - chr5.4:69139805-69139824 None:intergenic 30.0%
TGCCCTATATTTAGATATCA+AGG - chr5.4:69143086-69143105 None:intergenic 30.0%
TGTGGAATTTCAATAACATC+TGG + chr5.4:69141391-69141410 MS.gene39813:CDS 30.0%
TTAGTACGAAAGGAAATTTC+TGG - chr5.4:69142762-69142781 None:intergenic 30.0%
TTGACTTACAGTTGAAGTTT+GGG + chr5.4:69141981-69142000 MS.gene39813:intron 30.0%
TTTGTAATAATCTACTGCAG+GGG + chr5.4:69139752-69139771 MS.gene39813:intron 30.0%
! AAAAGGACATGATAATGAGT+TGG - chr5.4:69144380-69144399 None:intergenic 30.0%
! AAAGCTGATTTCAACTTTGT+AGG - chr5.4:69139549-69139568 None:intergenic 30.0%
! AAAGGACTCTAAAGAATTTG+AGG + chr5.4:69140213-69140232 MS.gene39813:CDS 30.0%
! AACCAAGAGTACAAAATTAC+TGG + chr5.4:69140254-69140273 MS.gene39813:CDS 30.0%
! AACCAGTAATTTTGTACTCT+TGG - chr5.4:69140259-69140278 None:intergenic 30.0%
! AACTCATTATCATGTCCTTT+TGG + chr5.4:69144379-69144398 MS.gene39813:CDS 30.0%
! AGTAATTTTGTACTCTTGGT+TGG - chr5.4:69140255-69140274 None:intergenic 30.0%
! CTTTTCATCAAGAAATTTGC+AGG - chr5.4:69143868-69143887 None:intergenic 30.0%
! GCTTGACAATTCATTTTCTA+TGG + chr5.4:69141012-69141031 MS.gene39813:intron 30.0%
! TTTATTCTTTTGTAGCTTGG+CGG + chr5.4:69142793-69142812 MS.gene39813:intron 30.0%
! TTTGACTTACAGTTGAAGTT+TGG + chr5.4:69141980-69141999 MS.gene39813:intron 30.0%
!! AGCAAACTTTGAAACAGTAT+AGG - chr5.4:69143397-69143416 None:intergenic 30.0%
!! GCAAACTTTGAAACAGTATA+GGG - chr5.4:69143396-69143415 None:intergenic 30.0%
!! GCGTATCCATTTTTAATGTT+TGG + chr5.4:69140338-69140357 MS.gene39813:intron 30.0%
!! TCCTTCAATTTTAGTACGAA+AGG - chr5.4:69142772-69142791 None:intergenic 30.0%
!! TGTTCTGTTTTGTTAAGTGT+TGG + chr5.4:69139124-69139143 MS.gene39813:intron 30.0%
!!! AGTTGGTTTTATGATATGCA+GGG + chr5.4:69143463-69143482 MS.gene39813:intron 30.0%
!!! ATTTTTTGTTTCTTGACCAC+AGG + chr5.4:69144548-69144567 MS.gene39813:intron 30.0%
!!! GGATGTATGCTTTTGAAATT+TGG + chr5.4:69139388-69139407 MS.gene39813:intron 30.0%
!!! GTTGCTCTTTTTTATGAAGA+TGG + chr5.4:69139170-69139189 MS.gene39813:intron 30.0%
!!! TAGGAGCTTTTGAAACAATA+GGG - chr5.4:69142858-69142877 None:intergenic 30.0%
!!! TTTTACTTAGCTTTGCTCAT+TGG + chr5.4:69141140-69141159 MS.gene39813:intron 30.0%
AAAAGCCAATCTCATCCAAA+AGG - chr5.4:69144397-69144416 None:intergenic 35.0%
AAGACTTCAATCCCAGAAAT+GGG + chr5.4:69142011-69142030 MS.gene39813:CDS 35.0%
ACTTTGTGTGATGATTCTTC+TGG - chr5.4:69143920-69143939 None:intergenic 35.0%
AGATGTGGACCAAATAGATA+TGG - chr5.4:69143235-69143254 None:intergenic 35.0%
AGGAAGAACTCTGATCTTTA+TGG + chr5.4:69142482-69142501 MS.gene39813:CDS 35.0%
AGGAGGATGAAGGAATAATA+AGG + chr5.4:69143170-69143189 MS.gene39813:CDS 35.0%
AGTTGTGAAAATCTGTTCTC+AGG + chr5.4:69144343-69144362 MS.gene39813:intron 35.0%
ATACGATACTTACACTGTAC+TGG - chr5.4:69139058-69139077 None:intergenic 35.0%
ATACGCATCAACAGAAATGT+GGG - chr5.4:69140324-69140343 None:intergenic 35.0%
ATATACAAAGGATCAGGTCT+AGG - chr5.4:69140176-69140195 None:intergenic 35.0%
ATTATTACCGCAGCAATTGA+GGG - chr5.4:69142934-69142953 None:intergenic 35.0%
CAACAATGACCAGAAATTTG+GGG - chr5.4:69143896-69143915 None:intergenic 35.0%
CAACTTTGTAGGTCTTTGAT+CGG - chr5.4:69139538-69139557 None:intergenic 35.0%
CAGACATTGTCCATCAATTT+GGG - chr5.4:69144820-69144839 None:intergenic 35.0%
CTTTGTGTGATGATTCTTCT+GGG - chr5.4:69143919-69143938 None:intergenic 35.0%
GACAGAGTTCAAGAAACTTA+TGG + chr5.4:69139233-69139252 MS.gene39813:CDS 35.0%
GAGAAGACTCTGTTTACTAT+TGG + chr5.4:69139293-69139312 MS.gene39813:CDS 35.0%
GAGATGGAACTTCAATAACA+AGG + chr5.4:69142033-69142052 MS.gene39813:CDS 35.0%
GAGCAATTGAGCATAACAAA+TGG - chr5.4:69140137-69140156 None:intergenic 35.0%
GAGCTAACTAACTATCAAAC+AGG - chr5.4:69141629-69141648 None:intergenic 35.0%
GATCATTGTGGAAGAAATTC+TGG - chr5.4:69139793-69139812 None:intergenic 35.0%
GATCTGCCATGTATTAATGT+TGG + chr5.4:69140537-69140556 MS.gene39813:CDS 35.0%
GATGAGAATACAGACAGAAA+AGG - chr5.4:69139925-69139944 None:intergenic 35.0%
GCAACAATGACCAGAAATTT+GGG - chr5.4:69143897-69143916 None:intergenic 35.0%
GCAATCAAGAAATCAACAAC+AGG - chr5.4:69140023-69140042 None:intergenic 35.0%
GCCTTAAAAACAAGTGACTA+TGG + chr5.4:69141346-69141365 MS.gene39813:CDS 35.0%
GGCCCTTGATATCTAAATAT+AGG + chr5.4:69143080-69143099 MS.gene39813:CDS 35.0%
GGGATAGAAAAAATTACAGC+TGG - chr5.4:69140304-69140323 None:intergenic 35.0%
GTAAGGGATCTGATAAAATG+TGG + chr5.4:69142220-69142239 MS.gene39813:CDS 35.0%
GTGAATGTTACTAACACTGA+TGG + chr5.4:69139023-69139042 MS.gene39813:CDS 35.0%
GTTGTGAAAATCTGTTCTCA+GGG + chr5.4:69144344-69144363 MS.gene39813:intron 35.0%
TATTACAGGTTGTAAGCTCA+AGG + chr5.4:69143053-69143072 MS.gene39813:intron 35.0%
TATTATTACCGCAGCAATTG+AGG - chr5.4:69142935-69142954 None:intergenic 35.0%
TGATAGTTAGTTAGCTCACA+TGG + chr5.4:69141632-69141651 MS.gene39813:intron 35.0%
TTACAACAGTTCTCACTTGA+TGG + chr5.4:69143424-69143443 MS.gene39813:intron 35.0%
TTACAGTTGAAGTTTGGGAA+TGG + chr5.4:69141986-69142005 MS.gene39813:intron 35.0%
TTATTCCAGTCAAGACTGAA+AGG - chr5.4:69140065-69140084 None:intergenic 35.0%
TTTCAGTCTTGACTGGAATA+AGG + chr5.4:69140064-69140083 MS.gene39813:CDS 35.0%
TTTGCTGAAGATCAATGCAA+AGG + chr5.4:69142684-69142703 MS.gene39813:CDS 35.0%
! AAAAGCTCCTACTCTCATTT+TGG + chr5.4:69142867-69142886 MS.gene39813:CDS 35.0%
! AAAGCTCCTACTCTCATTTT+GGG + chr5.4:69142868-69142887 MS.gene39813:CDS 35.0%
! AATGAAAGGCACATACTGTT+TGG - chr5.4:69139681-69139700 None:intergenic 35.0%
! ACTGCAGAGAAATTTTTCTG+CGG - chr5.4:69140509-69140528 None:intergenic 35.0%
! AGGTATTTTCACTCTTCCTT+TGG + chr5.4:69142704-69142723 MS.gene39813:intron 35.0%
! AGTACAGTGTAAGTATCGTA+TGG + chr5.4:69139057-69139076 MS.gene39813:intron 35.0%
! ATTTGAAATGTGAAGGTCCA+TGG + chr5.4:69142578-69142597 MS.gene39813:intron 35.0%
! ATTTTGTACTCTTGGTTGGT+TGG - chr5.4:69140251-69140270 None:intergenic 35.0%
! GCAAGATTCTTTTTCTTCCA+TGG - chr5.4:69142598-69142617 None:intergenic 35.0%
! TAACAGGTTGCACAATTTTC+TGG - chr5.4:69142144-69142163 None:intergenic 35.0%
! TGCAAAATACTTGCTACTGA+TGG + chr5.4:69141935-69141954 MS.gene39813:intron 35.0%
! TTCAAACAGGTTGAAATGTG+TGG + chr5.4:69139367-69139386 MS.gene39813:intron 35.0%
! TTGAAGATGTCACTTCAAAC+AGG + chr5.4:69139354-69139373 MS.gene39813:CDS 35.0%
! TTGAAGTGATTTGTAAGCAG+AGG - chr5.4:69139002-69139021 None:intergenic 35.0%
! TTTGAAACAATAGGGATGGA+TGG - chr5.4:69142850-69142869 None:intergenic 35.0%
!! ACTTATGGTTCTGAGCTTAA+TGG + chr5.4:69139248-69139267 MS.gene39813:CDS 35.0%
!! AGCTTTTTCTTAACTGTGTG+CGG - chr5.4:69138924-69138943 None:intergenic 35.0%
!! CCTTTTTGCTGATTGATGTA+GGG + chr5.4:69143703-69143722 MS.gene39813:intron 35.0%
!! CTTATGGTTCTGAGCTTAAT+GGG + chr5.4:69139249-69139268 MS.gene39813:CDS 35.0%
!! TAAAATAGAGAAATGGGCTG+TGG + chr5.4:69142162-69142181 MS.gene39813:CDS 35.0%
!! TCCTTTTTGCTGATTGATGT+AGG + chr5.4:69143702-69143721 MS.gene39813:intron 35.0%
!! TTTTGTACTCTTGGTTGGTT+GGG - chr5.4:69140250-69140269 None:intergenic 35.0%
!!! AGCTTTTGAAACAATAGGGA+TGG - chr5.4:69142854-69142873 None:intergenic 35.0%
!!! ATTTTTTCAACTCTGACCAG+AGG - chr5.4:69142398-69142417 None:intergenic 35.0%
!!! GAGTTGGTTTTATGATATGC+AGG + chr5.4:69143462-69143481 MS.gene39813:intron 35.0%
!!! GCCATAGTCACTTGTTTTTA+AGG - chr5.4:69141350-69141369 None:intergenic 35.0%
!!! GCCCATTTCTCTATTTTAAC+AGG - chr5.4:69142160-69142179 None:intergenic 35.0%
!!! GTAGGAGCTTTTGAAACAAT+AGG - chr5.4:69142859-69142878 None:intergenic 35.0%
!!! TGACCTTTTTTCAGGAACAA+CGG + chr5.4:69139446-69139465 MS.gene39813:intron 35.0%
AAAGTGGAACCCCAAATTTC+TGG + chr5.4:69143884-69143903 MS.gene39813:CDS 40.0%
AAGAATTTCACGGATGTAGG+AGG + chr5.4:69139815-69139834 MS.gene39813:CDS 40.0%
AAGTTCCATCTCCCATTTCT+GGG - chr5.4:69142025-69142044 None:intergenic 40.0%
AATTCCACAGTTACGTAGCA+TGG - chr5.4:69141380-69141399 None:intergenic 40.0%
ACAACAAAATCTGTCATCCC+CGG + chr5.4:69144082-69144101 MS.gene39813:CDS 40.0%
ACAACCATGATTGTTCATCC+TGG + chr5.4:69139996-69140015 MS.gene39813:CDS 40.0%
ACAAGCTCTTGAAGATCATC+CGG - chr5.4:69144422-69144441 None:intergenic 40.0%
ACATGCATTCAGCTTACAGA+TGG - chr5.4:69141865-69141884 None:intergenic 40.0%
ACGTTCAGTCTAAACTACCA+GGG + chr5.4:69142426-69142445 MS.gene39813:CDS 40.0%
ACTTCAAAGATCTTCCCTTG+TGG + chr5.4:69141197-69141216 MS.gene39813:CDS 40.0%
AGCAGACAAAGGAGAAACTT+AGG - chr5.4:69142455-69142474 None:intergenic 40.0%
AGCATCTAAGTTACCTCAAC+TGG - chr5.4:69140588-69140607 None:intergenic 40.0%
AGGGATCTGATAAAATGTGG+AGG + chr5.4:69142223-69142242 MS.gene39813:CDS 40.0%
AGTACTACTGCTATCTCTGT+TGG + chr5.4:69144580-69144599 MS.gene39813:CDS 40.0%
ATAAAGGGTGAATGACAACC+AGG - chr5.4:69141504-69141523 None:intergenic 40.0%
ATTCCACAGTTACGTAGCAT+GGG - chr5.4:69141379-69141398 None:intergenic 40.0%
CAAATGATACTGACAGGAAG+AGG + chr5.4:69139498-69139517 MS.gene39813:CDS 40.0%
CAACCATGATTGTTCATCCT+GGG + chr5.4:69139997-69140016 MS.gene39813:CDS 40.0%
CCATCGCTAATGCCTTAAAA+GGG + chr5.4:69139591-69139610 MS.gene39813:CDS 40.0%
CCCTACATCAATCAGCAAAA+AGG - chr5.4:69143706-69143725 None:intergenic 40.0%
CCTAAGAATTTCACGGATGT+AGG + chr5.4:69139812-69139831 MS.gene39813:CDS 40.0%
CCTACATCCGTGAAATTCTT+AGG - chr5.4:69139815-69139834 None:intergenic 40.0%
CTCTCTCTCATATGTGTAAG+TGG + chr5.4:69144445-69144464 MS.gene39813:intron 40.0%
CTCTTCCTGTCAGTATCATT+TGG - chr5.4:69139500-69139519 None:intergenic 40.0%
GAAGACTTCAATCCCAGAAA+TGG + chr5.4:69142010-69142029 MS.gene39813:CDS 40.0%
GAAGTCCAAATGATACTGAC+AGG + chr5.4:69139492-69139511 MS.gene39813:CDS 40.0%
GATACGCATCAACAGAAATG+TGG - chr5.4:69140325-69140344 None:intergenic 40.0%
GCAAAACATTGGTCAGATAC+TGG - chr5.4:69142669-69142688 None:intergenic 40.0%
GCAGACATTGTCCATCAATT+TGG - chr5.4:69144821-69144840 None:intergenic 40.0%
GCATCTAAGTTACCTCAACT+GGG - chr5.4:69140587-69140606 None:intergenic 40.0%
GGCAACAATGACCAGAAATT+TGG - chr5.4:69143898-69143917 None:intergenic 40.0%
GGCTTCCCAACATTAATACA+TGG - chr5.4:69140546-69140565 None:intergenic 40.0%
GTATCAGATAAGGAGGATGA+AGG + chr5.4:69143160-69143179 MS.gene39813:CDS 40.0%
GTTCAAGCCAGTATCAGATA+AGG + chr5.4:69143150-69143169 MS.gene39813:CDS 40.0%
TAAGAAAAAGCTTCCCACCA+AGG + chr5.4:69138932-69138951 MS.gene39813:CDS 40.0%
TCATCCTCCTTATCTGATAC+TGG - chr5.4:69143160-69143179 None:intergenic 40.0%
TCATTGAGCATCTGAATACC+AGG - chr5.4:69144504-69144523 None:intergenic 40.0%
TGAAAGGATCTCTCACATTC+TGG - chr5.4:69140049-69140068 None:intergenic 40.0%
TGAAATTCCCTCAATTGCTG+CGG + chr5.4:69142924-69142943 MS.gene39813:CDS 40.0%
TGAACTGAGCCAAATCATTG+AGG + chr5.4:69143766-69143785 MS.gene39813:CDS 40.0%
TTCCCGTTGTTCCTGAAAAA+AGG - chr5.4:69139452-69139471 None:intergenic 40.0%
TTCGGTAAAGCACAACAGAA+GGG - chr5.4:69143676-69143695 None:intergenic 40.0%
TTGAAGAAAACGGCCAGTTT+AGG + chr5.4:69142363-69142382 MS.gene39813:CDS 40.0%
! AAAGGATCAGGTCTAGGTTT+TGG - chr5.4:69140170-69140189 None:intergenic 40.0%
! ATACGGAGAAAGACTTGCTT+AGG - chr5.4:69140976-69140995 None:intergenic 40.0%
! ATGATAATGAGTTGGCCTAC+TGG - chr5.4:69144372-69144391 None:intergenic 40.0%
! CATGTCCTTTTGGATGAGAT+TGG + chr5.4:69144389-69144408 MS.gene39813:CDS 40.0%
! CTCAGTTTCATGCCCTTTTA+AGG - chr5.4:69139606-69139625 None:intergenic 40.0%
! GTAGTTGCTGTTCTTCATGA+TGG + chr5.4:69140372-69140391 MS.gene39813:intron 40.0%
! TAAGTATCGTATGGTGCAGT+TGG + chr5.4:69139066-69139085 MS.gene39813:intron 40.0%
! TCTGAAACTTCATCTAGCCA+TGG + chr5.4:69144751-69144770 MS.gene39813:CDS 40.0%
! TGATTGGTTCAAGATCTGCT+GGG - chr5.4:69138893-69138912 None:intergenic 40.0%
! TTGATTGGTTCAAGATCTGC+TGG - chr5.4:69138894-69138913 None:intergenic 40.0%
! TTGCTTAGGCACAAGCTTTT+GGG - chr5.4:69140962-69140981 None:intergenic 40.0%
! TTTGCTGATTGATGTAGGGA+TGG + chr5.4:69143707-69143726 MS.gene39813:intron 40.0%
!! AAGATCTTTGAAGTGTGGAC+AGG - chr5.4:69141191-69141210 None:intergenic 40.0%
!! AAGGGAAGATCTTTGAAGTG+TGG - chr5.4:69141196-69141215 None:intergenic 40.0%
!! AATTACAGCTGGTCTTTGCA+AGG - chr5.4:69140293-69140312 None:intergenic 40.0%
!! AGATCTTTGAAGTGTGGACA+GGG - chr5.4:69141190-69141209 None:intergenic 40.0%
!! AGTGGGCTGTCTTTGAATAT+AGG + chr5.4:69139887-69139906 MS.gene39813:CDS 40.0%
!!! GACCTTTTTTCAGGAACAAC+GGG + chr5.4:69139447-69139466 MS.gene39813:intron 40.0%
AAGAAATCAACAACAGGCCC+AGG - chr5.4:69140017-69140036 None:intergenic 45.0%
AATTTCACGGATGTAGGAGG+TGG + chr5.4:69139818-69139837 MS.gene39813:CDS 45.0%
AATTTGGGCAACTGTGGGAT+GGG - chr5.4:69144805-69144824 None:intergenic 45.0%
ACCAACATTTGTCCCAGTTG+AGG + chr5.4:69140572-69140591 MS.gene39813:CDS 45.0%
ACCTCAACTGGGACAAATGT+TGG - chr5.4:69140576-69140595 None:intergenic 45.0%
AGATCAGAGTTCTTCCTCTC+AGG - chr5.4:69142479-69142498 None:intergenic 45.0%
AGGTTGTAAGCTCAAGGCAA+TGG + chr5.4:69143059-69143078 MS.gene39813:intron 45.0%
CAAGCCAGTATCAGATAAGG+AGG + chr5.4:69143153-69143172 MS.gene39813:CDS 45.0%
CACGTTCAGTCTAAACTACC+AGG + chr5.4:69142425-69142444 MS.gene39813:CDS 45.0%
CACTTGAGAAGCAGCCAAAT+GGG - chr5.4:69144704-69144723 None:intergenic 45.0%
CATTTGGCTGCTTCTCAAGT+GGG + chr5.4:69144703-69144722 MS.gene39813:CDS 45.0%
CCATCAATTTGGGCAACTGT+GGG - chr5.4:69144810-69144829 None:intergenic 45.0%
CGTTCAGTCTAAACTACCAG+GGG + chr5.4:69142427-69142446 MS.gene39813:CDS 45.0%
CTCCTCTGTATCATCTTCTC+CGG - chr5.4:69140460-69140479 None:intergenic 45.0%
CTTCCCTTGTGGAAAAGTCT+AGG + chr5.4:69141208-69141227 MS.gene39813:CDS 45.0%
GAAACTTCATCTAGCCATGG+TGG + chr5.4:69144754-69144773 MS.gene39813:CDS 45.0%
GAAAGACCTTGCGTATGATG+GGG + chr5.4:69139271-69139290 MS.gene39813:CDS 45.0%
GAAGTTCCATCTCCCATTTC+TGG - chr5.4:69142026-69142045 None:intergenic 45.0%
GAGATCCTTTCAGTCTTGAC+TGG + chr5.4:69140057-69140076 MS.gene39813:CDS 45.0%
GAGGGAATTTCAGTTTGTCC+AGG - chr5.4:69142916-69142935 None:intergenic 45.0%
GATGTTTCTCATGGTTCACC+TGG + chr5.4:69142895-69142914 MS.gene39813:CDS 45.0%
GCCATCGCTAATGCCTTAAA+AGG + chr5.4:69139590-69139609 MS.gene39813:CDS 45.0%
GGAAAGACCTTGCGTATGAT+GGG + chr5.4:69139270-69139289 MS.gene39813:CDS 45.0%
GTTCGGTAAAGCACAACAGA+AGG - chr5.4:69143677-69143696 None:intergenic 45.0%
TAGTACTCCTCTGATACCTG+TGG - chr5.4:69144567-69144586 None:intergenic 45.0%
TCAAGATCTGCTGGGACAAT+GGG - chr5.4:69138885-69138904 None:intergenic 45.0%
TCAATCCCAGAAATGGGAGA+TGG + chr5.4:69142017-69142036 MS.gene39813:CDS 45.0%
TCAGTGTATTGCTCCTACCA+GGG + chr5.4:69142636-69142655 MS.gene39813:CDS 45.0%
TCCAATCTGCTATGCCCATT+TGG + chr5.4:69144687-69144706 MS.gene39813:CDS 45.0%
TCCATCAATTTGGGCAACTG+TGG - chr5.4:69144811-69144830 None:intergenic 45.0%
TCCATGCCCAAAATGAGAGT+AGG - chr5.4:69142877-69142896 None:intergenic 45.0%
TCCTCTGTATCATCTTCTCC+GGG - chr5.4:69140459-69140478 None:intergenic 45.0%
TGATGTGCGAGGACTTGTAA+GGG + chr5.4:69142204-69142223 MS.gene39813:CDS 45.0%
TTCAAGATCTGCTGGGACAA+TGG - chr5.4:69138886-69138905 None:intergenic 45.0%
TTCTACATGTGTGCTCATGC+TGG + chr5.4:69144114-69144133 MS.gene39813:CDS 45.0%
TTCTTGACCACAGGTATCAG+AGG + chr5.4:69144557-69144576 MS.gene39813:intron 45.0%
TTGGACTTCCATGTCCATCA+GGG - chr5.4:69139481-69139500 None:intergenic 45.0%
TTGGGCATGGATGTTTCTCA+TGG + chr5.4:69142886-69142905 MS.gene39813:CDS 45.0%
TTTGGACTTCCATGTCCATC+AGG - chr5.4:69139482-69139501 None:intergenic 45.0%
! AGCTTTTGGGCACATGACTT+AGG - chr5.4:69140949-69140968 None:intergenic 45.0%
! AGGTTCACTCTGAAGAAGAG+AGG + chr5.4:69140426-69140445 MS.gene39813:intron 45.0%
! CTGCCTAGACTTTTCCACAA+GGG - chr5.4:69141214-69141233 None:intergenic 45.0%
! CTTGCTTAGGCACAAGCTTT+TGG - chr5.4:69140963-69140982 None:intergenic 45.0%
! GGCGGCATGAATTCTCTTTT+AGG + chr5.4:69142811-69142830 MS.gene39813:CDS 45.0%
! GGCTTTGGTATAGCGTTGAA+GGG - chr5.4:69141169-69141188 None:intergenic 45.0%
! TCCTACTCTCATTTTGGGCA+TGG + chr5.4:69142873-69142892 MS.gene39813:CDS 45.0%
! TCTGCCTAGACTTTTCCACA+AGG - chr5.4:69141215-69141234 None:intergenic 45.0%
! TCTGGCTTCACACAAGTTGA+CGG + chr5.4:69141409-69141428 MS.gene39813:CDS 45.0%
! TTTTCAACTCTGACCAGAGG+TGG - chr5.4:69142395-69142414 None:intergenic 45.0%
!! TGGTTTTGCAGGTACTGTTG+TGG + chr5.4:69144059-69144078 MS.gene39813:intron 45.0%
!!! CCCTTTTAAGGCATTAGCGA+TGG - chr5.4:69139594-69139613 None:intergenic 45.0%
!!! GGATGAGATTGGCTTTTCTC+CGG + chr5.4:69144400-69144419 MS.gene39813:CDS 45.0%
!! TATTTAATATAAAATAACAA+GGG + chr5.4:69139719-69139738 MS.gene39813:intron 5.0%
!! TTATTTAATATAAAATAACA+AGG + chr5.4:69139718-69139737 MS.gene39813:intron 5.0%
AAGGTTCCAATGGCAAGACG+TGG + chr5.4:69138951-69138970 MS.gene39813:CDS 50.0%
AAGTCCTCGCACATCACAAC+GGG - chr5.4:69142200-69142219 None:intergenic 50.0%
ACGTCTTGCCATTGGAACCT+TGG - chr5.4:69138952-69138971 None:intergenic 50.0%
ACTTTGTGTGGTCCTGAAGC+TGG - chr5.4:69139870-69139889 None:intergenic 50.0%
AGCTTCAGGACCACACAAAG+TGG + chr5.4:69139869-69139888 MS.gene39813:CDS 50.0%
AGGCCCAGGATGAACAATCA+TGG - chr5.4:69140003-69140022 None:intergenic 50.0%
CAAAGACAGCCCACTTTGTG+TGG - chr5.4:69139882-69139901 None:intergenic 50.0%
CAACCTTAGCACCCTGAGTT+CGG - chr5.4:69143114-69143133 None:intergenic 50.0%
CAAGTCCTCGCACATCACAA+CGG - chr5.4:69142201-69142220 None:intergenic 50.0%
CAATTTGGGCAACTGTGGGA+TGG - chr5.4:69144806-69144825 None:intergenic 50.0%
CACACAAAGTTCTTCCAGCC+TGG + chr5.4:69143930-69143949 MS.gene39813:CDS 50.0%
CAGCACCCTTTCCTTCAACA+GGG - chr5.4:69139199-69139218 None:intergenic 50.0%
CCACTTGAGAAGCAGCCAAA+TGG - chr5.4:69144705-69144724 None:intergenic 50.0%
CCATTTGGCTGCTTCTCAAG+TGG + chr5.4:69144702-69144721 MS.gene39813:CDS 50.0%
CCCACAGTTGCCCAAATTGA+TGG + chr5.4:69144807-69144826 MS.gene39813:CDS 50.0%
CTCAGTGTATTGCTCCTACC+AGG + chr5.4:69142635-69142654 MS.gene39813:CDS 50.0%
CTTGCCATTGGAACCTTGGT+GGG - chr5.4:69138948-69138967 None:intergenic 50.0%
GATGTAGGAGGTGGTGTTCT+TGG + chr5.4:69139827-69139846 MS.gene39813:CDS 50.0%
GCCAAATGGGCATAGCAGAT+TGG - chr5.4:69144691-69144710 None:intergenic 50.0%
GCTTCAGGACCACACAAAGT+GGG + chr5.4:69139870-69139889 MS.gene39813:CDS 50.0%
GGGAAAGACCTTGCGTATGA+TGG + chr5.4:69139269-69139288 MS.gene39813:CDS 50.0%
GGGACAAATGTTGGTCGCTT+TGG - chr5.4:69140567-69140586 None:intergenic 50.0%
GTGATGTGCGAGGACTTGTA+AGG + chr5.4:69142203-69142222 MS.gene39813:CDS 50.0%
GTGGTGTTCTTGGATGCAGA+GGG + chr5.4:69139837-69139856 MS.gene39813:CDS 50.0%
GTGTGCGGCTCAATCTTGAT+TGG - chr5.4:69138909-69138928 None:intergenic 50.0%
TCCCGGAGAAGATGATACAG+AGG + chr5.4:69140455-69140474 MS.gene39813:CDS 50.0%
TCCTCTCAGGAAGCAGACAA+AGG - chr5.4:69142466-69142485 None:intergenic 50.0%
TCCTTTGTCTGCTTCCTGAG+AGG + chr5.4:69142462-69142481 MS.gene39813:CDS 50.0%
TCTTCTCCCCATCATACGCA+AGG - chr5.4:69139280-69139299 None:intergenic 50.0%
TCTTGCCATTGGAACCTTGG+TGG - chr5.4:69138949-69138968 None:intergenic 50.0%
TTGAAGTGTGGACAGGGCTT+TGG - chr5.4:69141184-69141203 None:intergenic 50.0%
! AATGCTAGCCCTGATGGACA+TGG + chr5.4:69139470-69139489 MS.gene39813:CDS 50.0%
! AGTCTGCTGAATGTGCTGCT+TGG + chr5.4:69141777-69141796 MS.gene39813:intron 50.0%
! CTGGCTTCACACAAGTTGAC+GGG + chr5.4:69141410-69141429 MS.gene39813:CDS 50.0%
! CTTCACACAAGTTGACGGGA+GGG + chr5.4:69141414-69141433 MS.gene39813:CDS 50.0%
! GGGCTTTGGTATAGCGTTGA+AGG - chr5.4:69141170-69141189 None:intergenic 50.0%
! TCACCAGGAGGCACATTATC+CGG - chr5.4:69143960-69143979 None:intergenic 50.0%
! TCTGTTCTCAGGGTACCAGT+AGG + chr5.4:69144354-69144373 MS.gene39813:intron 50.0%
!! AAGAAGAGAGGTGCTGTTCC+CGG + chr5.4:69140438-69140457 MS.gene39813:CDS 50.0%
AACGGGAATGCTAGCCCTGA+TGG + chr5.4:69139464-69139483 MS.gene39813:CDS 55.0%
AAGACCCTCATCCGCTCTTG+TGG - chr5.4:69141240-69141259 None:intergenic 55.0%
AGAAGCCACAAGAGCGGATG+AGG + chr5.4:69141232-69141251 MS.gene39813:CDS 55.0%
AGAGCGGATGAGGGTCTTGA+CGG + chr5.4:69141242-69141261 MS.gene39813:CDS 55.0%
AGATCTGCTGGGACAATGGG+AGG - chr5.4:69138882-69138901 None:intergenic 55.0%
AGGAGAAACTTAGGAGCCCC+TGG - chr5.4:69142446-69142465 None:intergenic 55.0%
CAGATACTGGTCGTTCACCC+TGG - chr5.4:69142656-69142675 None:intergenic 55.0%
CATTATCCGGAGATCCAGGC+TGG - chr5.4:69143947-69143966 None:intergenic 55.0%
CCAATGGCAAGACGTGGACT+GGG + chr5.4:69138957-69138976 MS.gene39813:CDS 55.0%
CCAGCACCCTTTCCTTCAAC+AGG - chr5.4:69139200-69139219 None:intergenic 55.0%
CTAGGCAGAAGCCACAAGAG+CGG + chr5.4:69141226-69141245 MS.gene39813:CDS 55.0%
GAAGATGGACGCCCTGTTGA+AGG + chr5.4:69139185-69139204 MS.gene39813:intron 55.0%
GAAGCCACAAGAGCGGATGA+GGG + chr5.4:69141233-69141252 MS.gene39813:CDS 55.0%
GAGCCCATGCTACGTAACTG+TGG + chr5.4:69141373-69141392 MS.gene39813:CDS 55.0%
GCTTCCCACCAAGGTTCCAA+TGG + chr5.4:69138941-69138960 MS.gene39813:CDS 55.0%
GGACGCCCTGTTGAAGGAAA+GGG + chr5.4:69139191-69139210 MS.gene39813:CDS 55.0%
GGCACATTATCCGGAGATCC+AGG - chr5.4:69143951-69143970 None:intergenic 55.0%
GGTGGTGTTCTTGGATGCAG+AGG + chr5.4:69139836-69139855 MS.gene39813:CDS 55.0%
GTTCTTCCAGCCTGGATCTC+CGG + chr5.4:69143938-69143957 MS.gene39813:CDS 55.0%
TACTGGTCGTTCACCCTGGT+AGG - chr5.4:69142652-69142671 None:intergenic 55.0%
TCATCTAGCCATGGTGGCAG+CGG + chr5.4:69144760-69144779 MS.gene39813:CDS 55.0%
TCCAATGGCAAGACGTGGAC+TGG + chr5.4:69138956-69138975 MS.gene39813:CDS 55.0%
TCTCCGGATAATGTGCCTCC+TGG + chr5.4:69143954-69143973 MS.gene39813:CDS 55.0%
TGCCTCAAAGATTCCCCTGC+AGG + chr5.4:69139568-69139587 MS.gene39813:CDS 55.0%
TGGACGCCCTGTTGAAGGAA+AGG + chr5.4:69139190-69139209 MS.gene39813:CDS 55.0%
! AGTTGACGGGAGGGTTTTGC+AGG + chr5.4:69141423-69141442 MS.gene39813:CDS 55.0%
! CCTGTTGAAGGAAAGGGTGC+TGG + chr5.4:69139197-69139216 MS.gene39813:CDS 55.0%
! GAGGGTTTTGCAGGCTCCTA+GGG + chr5.4:69141432-69141451 MS.gene39813:CDS 55.0%
! GCTTCACACAAGTTGACGGG+AGG + chr5.4:69141413-69141432 MS.gene39813:CDS 55.0%
!! TTCTGAAGCAGCAGCTCACC+AGG - chr5.4:69143975-69143994 None:intergenic 55.0%
!! TTGAAGGAAAGGGTGCTGGC+AGG + chr5.4:69139201-69139220 MS.gene39813:CDS 55.0%
AGGCATTAGCGATGGCCTGC+AGG - chr5.4:69139586-69139605 None:intergenic 60.0%
AGGGCATGCGTCCGAACTCA+GGG + chr5.4:69143100-69143119 MS.gene39813:CDS 60.0%
CCCAGTCCACGTCTTGCCAT+TGG - chr5.4:69138960-69138979 None:intergenic 60.0%
GAGGGCTGCATTCCAGCTTC+AGG + chr5.4:69139855-69139874 MS.gene39813:CDS 60.0%
GAGGTGGTGCACGCCTAAAC+TGG - chr5.4:69142379-69142398 None:intergenic 60.0%
GCATTAGCGATGGCCTGCAG+GGG - chr5.4:69139584-69139603 None:intergenic 60.0%
GGCATTAGCGATGGCCTGCA+GGG - chr5.4:69139585-69139604 None:intergenic 60.0%
GGCCTGCAGGGGAATCTTTG+AGG - chr5.4:69139573-69139592 None:intergenic 60.0%
GTTTAGGCGTGCACCACCTC+TGG + chr5.4:69142379-69142398 MS.gene39813:CDS 60.0%
TAGGGCATGCGTCCGAACTC+AGG + chr5.4:69143099-69143118 MS.gene39813:CDS 60.0%
TATCACGACCGCTGCCACCA+TGG - chr5.4:69144771-69144790 None:intergenic 60.0%
TCTGCCCGTTGTGATGTGCG+AGG + chr5.4:69142193-69142212 MS.gene39813:CDS 60.0%
TCTGCTGGGACAATGGGAGG+TGG - chr5.4:69138879-69138898 None:intergenic 60.0%
TGAAGCAGCAGCTCACCAGG+AGG - chr5.4:69143972-69143991 None:intergenic 60.0%
! CGTCCGAACTCAGGGTGCTA+AGG + chr5.4:69143108-69143127 MS.gene39813:CDS 60.0%
! GGAGGGTTTTGCAGGCTCCT+AGG + chr5.4:69141431-69141450 MS.gene39813:CDS 60.0%
!! AAGACGTGGACTGGGCTCGA+AGG + chr5.4:69138965-69138984 MS.gene39813:CDS 60.0%
!! AGACGTGGACTGGGCTCGAA+GGG + chr5.4:69138966-69138985 MS.gene39813:CDS 60.0%
CTGGGACAATGGGAGGTGGC+GGG - chr5.4:69138875-69138894 None:intergenic 65.0%
GCTGGGACAATGGGAGGTGG+CGG - chr5.4:69138876-69138895 None:intergenic 65.0%
GGGCAACTGTGGGATGGGAG+AGG - chr5.4:69144800-69144819 None:intergenic 65.0%
TGGGACAATGGGAGGTGGCG+GGG - chr5.4:69138874-69138893 None:intergenic 65.0%
! GGGACAATGGGAGGTGGCGG+GGG - chr5.4:69138873-69138892 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 69138840 69144861 69138840 ID=MS.gene39813
chr5.4 mRNA 69138840 69144861 69138840 ID=MS.gene39813.t1;Parent=MS.gene39813
chr5.4 exon 69138840 69139068 69138840 ID=MS.gene39813.t1.exon1;Parent=MS.gene39813.t1
chr5.4 CDS 69138840 69139068 69138840 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69139189 69139375 69139189 ID=MS.gene39813.t1.exon2;Parent=MS.gene39813.t1
chr5.4 CDS 69139189 69139375 69139189 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69139460 69139684 69139460 ID=MS.gene39813.t1.exon3;Parent=MS.gene39813.t1
chr5.4 CDS 69139460 69139684 69139460 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69139772 69139908 69139772 ID=MS.gene39813.t1.exon4;Parent=MS.gene39813.t1
chr5.4 CDS 69139772 69139908 69139772 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69139988 69140085 69139988 ID=MS.gene39813.t1.exon5;Parent=MS.gene39813.t1
chr5.4 CDS 69139988 69140085 69139988 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69140209 69140306 69140209 ID=MS.gene39813.t1.exon6;Parent=MS.gene39813.t1
chr5.4 CDS 69140209 69140306 69140209 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69140428 69140593 69140428 ID=MS.gene39813.t1.exon7;Parent=MS.gene39813.t1
chr5.4 CDS 69140428 69140593 69140428 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69141150 69141266 69141150 ID=MS.gene39813.t1.exon8;Parent=MS.gene39813.t1
chr5.4 CDS 69141150 69141266 69141150 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69141346 69141453 69141346 ID=MS.gene39813.t1.exon9;Parent=MS.gene39813.t1
chr5.4 CDS 69141346 69141453 69141346 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69141992 69142054 69141992 ID=MS.gene39813.t1.exon10;Parent=MS.gene39813.t1
chr5.4 CDS 69141992 69142054 69141992 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69142145 69142258 69142145 ID=MS.gene39813.t1.exon11;Parent=MS.gene39813.t1
chr5.4 CDS 69142145 69142258 69142145 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69142338 69142503 69142338 ID=MS.gene39813.t1.exon12;Parent=MS.gene39813.t1
chr5.4 CDS 69142338 69142503 69142338 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69142593 69142705 69142593 ID=MS.gene39813.t1.exon13;Parent=MS.gene39813.t1
chr5.4 CDS 69142593 69142705 69142593 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69142808 69142945 69142808 ID=MS.gene39813.t1.exon14;Parent=MS.gene39813.t1
chr5.4 CDS 69142808 69142945 69142808 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69143061 69143191 69143061 ID=MS.gene39813.t1.exon15;Parent=MS.gene39813.t1
chr5.4 CDS 69143061 69143191 69143061 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69143484 69143549 69143484 ID=MS.gene39813.t1.exon16;Parent=MS.gene39813.t1
chr5.4 CDS 69143484 69143549 69143484 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69143724 69143787 69143724 ID=MS.gene39813.t1.exon17;Parent=MS.gene39813.t1
chr5.4 CDS 69143724 69143787 69143724 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69143864 69143975 69143864 ID=MS.gene39813.t1.exon18;Parent=MS.gene39813.t1
chr5.4 CDS 69143864 69143975 69143864 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69144070 69144143 69144070 ID=MS.gene39813.t1.exon19;Parent=MS.gene39813.t1
chr5.4 CDS 69144070 69144143 69144070 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69144365 69144459 69144365 ID=MS.gene39813.t1.exon20;Parent=MS.gene39813.t1
chr5.4 CDS 69144365 69144459 69144365 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69144570 69144601 69144570 ID=MS.gene39813.t1.exon21;Parent=MS.gene39813.t1
chr5.4 CDS 69144570 69144601 69144570 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
chr5.4 exon 69144683 69144861 69144683 ID=MS.gene39813.t1.exon22;Parent=MS.gene39813.t1
chr5.4 CDS 69144683 69144861 69144683 ID=cds.MS.gene39813.t1;Parent=MS.gene39813.t1
Gene Sequence

>MS.gene39813

ATGGGTTCTCAAGAGAATGAAGAATGTTTACCCCCGCCACCTCCCATTGTCCCAGCAGATCTTGAACCAATCAAGATTGAGCCGCACACAGTTAAGAAAAAGCTTCCCACCAAGGTTCCAATGGCAAGACGTGGACTGGGCTCGAAGGGAGCTAAACTGCCTCTGCTTACAAATCACTTCAAAGTGAATGTTACTAACACTGATGGTTATTTCTTCCAGTACAGTGTAAGTATCGTATGGTGCAGTTGGTTTGTTGATTTTTTTTTTTTTTTTGTGATGTTTATTGTTCTGTTTTGTTAAGTGTTGGCTCATTACTTTGTATTTGTTTAGGTTGCTCTTTTTTATGAAGATGGACGCCCTGTTGAAGGAAAGGGTGCTGGCAGGAAGATACTTGACAGAGTTCAAGAAACTTATGGTTCTGAGCTTAATGGGAAAGACCTTGCGTATGATGGGGAGAAGACTCTGTTTACTATTGGCTCACTTGCTCAGAACAAGCTCGAGTTTACTGTTGTTCTTGAAGATGTCACTTCAAACAGGTTGAAATGTGTGGATGTATGCTTTTGAAATTTGGGTTTCATTGTTTTTATATGTTTCTGATATTTAACTTGACCTTTTTTCAGGAACAACGGGAATGCTAGCCCTGATGGACATGGAAGTCCAAATGATACTGACAGGAAGAGGTTGAAAAAATCATACCGATCAAAGACCTACAAAGTTGAAATCAGCTTTGCCTCAAAGATTCCCCTGCAGGCCATCGCTAATGCCTTAAAAGGGCATGAAACTGAGAATTATCAAGAAGCGATTAGGGTTCTTGACATTATCTTGAGACAACATGCTGCCAAACAGTATGTGCCTTTCATTATTATAAATGTATTTTTTTATTTAATATAAAATAACAAGGGTACTAATGTCTTTGTAATAATCTACTGCAGGGGCTGTCTGCTCGTTCGCCAGAATTTCTTCCACAATGATCCTAAGAATTTCACGGATGTAGGAGGTGGTGTTCTTGGATGCAGAGGGCTGCATTCCAGCTTCAGGACCACACAAAGTGGGCTGTCTTTGAATATAGGTATATCTTGTTGCCTTTTCTGTCTGTATTCTCATCTGACTAATTTGTCACTATTGCTTATTTCATTCAATTTGTTTAGACGTGTCAACAACCATGATTGTTCATCCTGGGCCTGTTGTTGATTTCTTGATTGCAAACCAGAATGTGAGAGATCCTTTCAGTCTTGACTGGAATAAGGTAACGAAATTTTCTGAAGAGTTGTTTGTTTTGCTAATTGTTTCTGAACCATTTGTTATGCTCAATTGCTCTTAAACTATTCCAAAACCTAGACCTGATCCTTTGTATATTTTATTTGTGTAGGCTAAAAGGACTCTAAAGAATTTGAGGATCACTACTAGCCCAACCAACCAAGAGTACAAAATTACTGGTTTAAGTGAAATGCCTTGCAAAGACCAGCTGTAATTTTTTCTATCCCACATTTCTGTTGATGCGTATCCATTTTTAATGTTTGGAATTGTTATTTGTAGTTGCTGTTCTTCATGATGGATGTTGTTATTAATGAAGATGTTGGTATTGTAGGTTCACTCTGAAGAAGAGAGGTGCTGTTCCCGGAGAAGATGATACAGAGGAGATCACTGTTTATGATTATTTTGTCAACCGCAGAAAAATTTCTCTGCAGTACTCAGCTGATCTGCCATGTATTAATGTTGGGAAGCCAAAGCGACCAACATTTGTCCCAGTTGAGGTAACTTAGATGCTTTATATTAATTTAGTACTAACCTAAAATTGTGTATTAGCTTATAATTTAGTTTCTCAAGCACTCAGCTCAGCTATTATGTATAATTTAGGTAGTAGAGATTTATAAATAGCTCAAAGCTTTACTGTTAATACTTAAGATAAACAATCCATATTTGAAAAGAATTGAAGGGTGAATTCACAAACTGATGTTCCTATTTAAGAAAAATACTTACTTGAGCACAAGTGTTTAGACACTAAATTTAAACACTCATACATAATTGAGAAAAGGTAGAGAGAGAAAATAATTAAATAAAATTTATTTTTCTAAATAGTGAAATAAAATGTATTTTGTGTGTGTGCCTAAGTCATGTGCCCAAAAGCTTGTGCCTAAGCAAGTCTTTCTCCGTATTTAATGTAGATAAGGTGCTTGACAATTCATTTTCTATGGAACCAATGAATTAATTAACCTACTTTCTGTTTTCTTTTCTTTCTGTAACTCTCATGATGTGCAGATTGATATTCTGTTTGATAACTAATTTTTAACATTTATGTGTTTTACTTAGCTTTGCTCATTGGTATCCCTTCAACGCTATACCAAAGCCCTGTCCACACTTCAAAGATCTTCCCTTGTGGAAAAGTCTAGGCAGAAGCCACAAGAGCGGATGAGGGTCTTGACGGATGTAAGTCTCTTTGATTTATATTAAGTAATGAAATGTCATATGATTGTCACTTCACTGAATATTATTTGCTGTTTTGCAGGCCTTAAAAACAAGTGACTATGGCTCTGAGCCCATGCTACGTAACTGTGGAATTTCAATAACATCTGGCTTCACACAAGTTGACGGGAGGGTTTTGCAGGCTCCTAGGGTATTCTGCTTTTATTATTGTTTTTTGGACATTCCTTATTTTTTTTTCCTGGTTGTCATTCACCCTTTATTGAGAAGCTGTTAGTATCTTTTGTTGAGTTATTTTCAGGAATTGAATAATAAAACAACATCTTTTTGACTGATTAACATCAATTTAAAAATTTACTTCTATTCCTGTTTGATAGTTAGTTAGCTCACATGGCTGTGCCCATTGCTATTCACCATTATTTGATGAAATTTATGTTATCTAACAAAACATTAAACTTTCTTTCAAAAAAACAAAACATTAAACTGTCATGATTCGCTTGAATTTTGCTCAATATCAGTCTGCTGAATGTGCTGCTTGGTTTGATTGTTTGTCAGCTTGAAAATGTGTAGCAACTAATTAATTATTTTCTTTGTAGTAAAACCATCTGTAAGCTGAATGCATGTTGTTTAGTGAGCTGATGTTTTACTTTCTGACTAATTATAGTACAATTAGTTGCAAAATACTTGCTACTGATGGCATCTGACATGTAATTATCTATTTTGACTTACAGTTGAAGTTTGGGAATGGCGAAGACTTCAATCCCAGAAATGGGAGATGGAACTTCAATAACAAGGTATTTGTTTCAAATCTGATCTACATTTTTAATTTTCTGGTATTTGTAATGTATAATATTTATTTTCTAATGTTTTAAATACTGTTCCAGAAAATTGTGCAACCTGTTAAAATAGAGAAATGGGCTGTGGTGAACTTTTCTGCCCGTTGTGATGTGCGAGGACTTGTAAGGGATCTGATAAAATGTGGAGGAATGAAAGGAATTGTAAGTGTTCTTCTACAGCTTATTTACTGACAAGCATAGAAAGGAGCTAATTCCATTCTGTTTTGTTTGCTTTTTGCAGCAAGTTGAGCAGCCTTTTGATTGCTTTGAAGAAAACGGCCAGTTTAGGCGTGCACCACCTCTGGTCAGAGTTGAAAAAATGTTCGAACACGTTCAGTCTAAACTACCAGGGGCTCCTAAGTTTCTCCTTTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTTTATGGTTCGTTCGTTGATATATTTCCATGCTATATACCTTTTTGTAATCCATTTGTTTGATTTCCTTAATGAAATTTTATTTGAAATGTGAAGGTCCATGGAAGAAAAAGAATCTTGCAGAGTTTGGAATTGTTACTCAGTGTATTGCTCCTACCAGGGTGAACGACCAGTATCTGACCAATGTTTTGCTGAAGATCAATGCAAAGGTATTTTCACTCTTCCTTTGGTTTCTTTTATATTATCGTCTTGCAATTTGTCTCCAGAAATTTCCTTTCGTACTAAAATTGAAGGATTTTATTCTTTTGTAGCTTGGCGGCATGAATTCTCTTTTAGGTGTTGAACACTCTCCATCCATCCCTATTGTTTCAAAAGCTCCTACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGACAAACTGAAATTCCCTCAATTGCTGCGGTAATAATAGTTTTTATTGTTTGTGCTATTAATGTTGTATTTTATGGTTTCGGTCTAAATTTACAGTTATCTAATTGTTTTTCTATTTTTCTATGTGAATGCTTAAATATTACAGGTTGTAAGCTCAAGGCAATGGCCCTTGATATCTAAATATAGGGCATGCGTCCGAACTCAGGGTGCTAAGGTTGAAATGATTGACAATCTGTTCAAGCCAGTATCAGATAAGGAGGATGAAGGAATAATAAGGTTGATTATTTTTTGATTCCTTTCCTTGAAATATTATTTTCCATATCTATTTGGTCCACATCTGTATTCAAAGATATTGGAGCAATAATGAAATTGTAATTTTTTCAACTTACTCCTTTTTAAGAAAAAAGATCCATTTTTAGATTGTTGTATTACATATGTATAATCTTGCGGATTCTGCGTGTTCATAAAGATCGTTGACCCTATACTGTTTCAAAGTTTGCTAAATGAATTACAACAGTTCTCACTTGATGGCTTAATTTATTTTTGGAGTTGGTTTTATGATATGCAGGGAACTTTTGATTGATTTTTATAATAGTTCTGGGAACAGAAAACCAGACAATATCATAATTTTCAGGTAATCTCGTTTCCAATTTTCTACCATTCTATTTCTTCGACTTATTACAACAATATTTATGATACAATTTTAGTCTGTTTATTTCTAGTAGTATGCTTTATTTTATTTGATAGTTTTCTGTGACCCTTCTGTTGTGCTTTACCGAACTTTATTCCTTTTTGCTGATTGATGTAGGGATGGTGTCAGCGAGTCTCAGTTCAACCAAGTTTTGAACATTGAACTGAGCCAAATCATTGAGGTTGTCAAATTGATCAATTCCTGTAAATATATGATTGCTTACTTGGTGGGATTAATCTTATTCTTTTAAATTCTAGGCCTGCAAATTTCTTGATGAAAAGTGGAACCCCAAATTTCTGGTCATTGTTGCCCAGAAGAATCATCACACAAAGTTCTTCCAGCCTGGATCTCCGGATAATGTGCCTCCTGGTGAGCTGCTGCTTCAGAACTTTGAGCTAGTCCATTATTTTATATATAAAGTTGGTTTCATGCCTAGCTAACCATATTTTTTTTGGTTTTGCAGGTACTGTTGTGGACAACAAAATCTGTCATCCCCGGAATTATGATTTCTACATGTGTGCTCATGCTGGAATGATTGTGAGTATCTTCTACTCTTTTTTCTATGATATTTATTCGAGTTAGATTCTCATGTATACTGATTTTTTTCATGCAAGTTATGACGATTTTTACATTGAAGAGAAAATTTTCAATCTTTGTTAACCATTGATTTTCATTTGGAATCCTTTTTGTTTGCAATTATCATGGATTTCTTTAGTAAAACCATGATACTTATTTTAGTTGTGAAAATCTGTTCTCAGGGTACCAGTAGGCCAACTCATTATCATGTCCTTTTGGATGAGATTGGCTTTTCTCCGGATGATCTTCAAGAGCTTGTGCACTCTCTCTCATATGTGTAAGTGGACATTCTAATTTGATTTTGTTTGAATTATGTTTCCTGGTATTCAGATGCTCAATGAATTCTATTGAAGTATATCTTACAAATTTTTTGTTTCTTGACCACAGGTATCAGAGGAGTACTACTGCTATCTCTGTTGGTAAGTTCTATCAGAGTTTACTTATTTGTTCTTGTGTATATTTTGAATAATAGATTCTAATTAGTTAACACATATATGCAGTTGCTCCAATCTGCTATGCCCATTTGGCTGCTTCTCAAGTGGGACAGTTCATGAAGTTTGAAGACAAGTCTGAAACTTCATCTAGCCATGGTGGCAGCGGTCGTGATATCAATGCCTCTCCCATCCCACAGTTGCCCAAATTGATGGACAATGTCTGCAACTCCATGTTCTTTGTTTGA
Protein sequence

>MS.gene39813.t1

MGSQENEECLPPPPPIVPADLEPIKIEPHTVKKKLPTKVPMARRGLGSKGAKLPLLTNHFKVNVTNTDGYFFQYSVNGRPVEGKGAGRKILDRVQETYGSELNGKDLAYDGEKTLFTIGSLAQNKLEFTVVLEDVTSNRNNGNASPDGHGSPNDTDRKRLKKSYRSKTYKVEISFASKIPLQAIANALKGHETENYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFTDVGGGVLGCRGLHSSFRTTQSGLSLNIDVSTTMIVHPGPVVDFLIANQNVRDPFSLDWNKAKRTLKNLRITTSPTNQEYKITGLSEMPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVNRRKISLQYSADLPCINVGKPKRPTFVPVELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLTDALKTSDYGSEPMLRNCGISITSGFTQVDGRVLQAPRLKFGNGEDFNPRNGRWNFNNKKIVQPVKIEKWAVVNFSARCDVRGLVRDLIKCGGMKGIQVEQPFDCFEENGQFRRAPPLVRVEKMFEHVQSKLPGAPKFLLCLLPERKNSDLYGPWKKKNLAEFGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSLLGVEHSPSIPIVSKAPTLILGMDVSHGSPGQTEIPSIAAVVSSRQWPLISKYRACVRTQGAKVEMIDNLFKPVSDKEDEGIIRELLIDFYNSSGNRKPDNIIIFRDGVSESQFNQVLNIELSQIIEACKFLDEKWNPKFLVIVAQKNHHTKFFQPGSPDNVPPGTVVDNKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSETSSSHGGSGRDINASPIPQLPKLMDNVCNSMFFV