AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99379

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99379.t1 MTR_5g087870 86.980 914 100 3 1 901 41 948 0.0 1628
MS.gene99379.t1 MTR_5g087890 88.790 901 92 4 1 901 1 892 0.0 1601
MS.gene99379.t1 MTR_5g087870 85.230 914 94 3 1 901 41 926 0.0 1583
MS.gene99379.t1 MTR_6g043180 78.475 892 175 4 20 901 19 903 0.0 1447
MS.gene99379.t1 MTR_3g078647 76.045 885 189 6 29 901 50 923 0.0 1414
MS.gene99379.t1 MTR_3g010650 58.931 879 344 7 28 900 8 875 0.0 1068
MS.gene99379.t1 MTR_3g083300 59.567 878 340 8 35 900 34 908 0.0 1024
MS.gene99379.t1 MTR_6g477980 35.333 917 485 23 43 900 241 1108 3.21e-159 495
MS.gene99379.t1 MTR_6g477980 35.333 917 485 23 43 900 247 1114 4.67e-159 495
MS.gene99379.t1 MTR_4g056430 35.367 885 510 26 43 900 121 970 6.56e-159 491
MS.gene99379.t1 MTR_2g059590 34.459 888 515 22 42 900 53 902 2.56e-158 487
MS.gene99379.t1 MTR_1g102630 34.295 901 509 25 43 900 117 977 5.34e-154 478
MS.gene99379.t1 MTR_4g056470 35.553 886 506 22 43 900 159 1007 1.02e-153 478
MS.gene99379.t1 MTR_4g113200 34.417 892 510 24 42 900 26 875 3.41e-152 470
MS.gene99379.t1 MTR_1g041345 33.742 898 514 24 43 900 122 978 9.99e-150 467
MS.gene99379.t1 MTR_2g059790 37.833 600 342 13 322 900 4 593 1.62e-121 381
MS.gene99379.t1 MTR_5g042590 30.032 949 553 33 10 900 120 1015 1.20e-117 383
MS.gene99379.t1 MTR_4g083610 30.346 781 453 22 113 857 194 919 9.16e-94 317
MS.gene99379.t1 MTR_2g059590 31.205 689 412 21 42 709 53 700 1.89e-93 310
MS.gene99379.t1 MTR_2g028910 28.571 784 478 20 164 901 282 1029 5.47e-93 316
MS.gene99379.t1 MTR_7g107230 42.963 270 41 6 302 568 62 221 4.68e-49 174
MS.gene99379.t1 MTR_3g101730 34.637 179 73 4 628 802 34 172 6.68e-24 100
MS.gene99379.t1 MTR_5g099230 63.768 69 25 0 833 901 38 106 8.67e-22 92.8
MS.gene99379.t1 MTR_6g037320 54.930 71 32 0 591 661 4 74 3.55e-17 78.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99379.t1 AT2G27040 69.213 890 253 5 25 900 41 923 0.0 1293
MS.gene99379.t1 AT2G27040 69.213 890 253 5 25 900 41 923 0.0 1293
MS.gene99379.t1 AT5G21150 66.965 893 273 9 16 900 17 895 0.0 1228
MS.gene99379.t1 AT5G21030 59.686 893 307 17 17 900 5 853 0.0 1019
MS.gene99379.t1 AT5G21030 59.686 893 303 18 17 900 5 849 0.0 1013
MS.gene99379.t1 AT2G32940 56.567 868 350 8 42 900 28 877 0.0 972
MS.gene99379.t1 AT2G27880 36.036 888 497 26 43 900 150 996 4.09e-156 484
MS.gene99379.t1 AT5G43810 34.038 899 510 23 43 900 131 987 3.23e-154 479
MS.gene99379.t1 AT5G43810 34.038 899 510 23 43 900 131 987 3.23e-154 479
MS.gene99379.t1 AT5G43810 34.038 899 510 23 43 900 131 987 3.23e-154 479
MS.gene99379.t1 AT5G43810 34.038 899 510 23 43 900 131 987 3.23e-154 479
MS.gene99379.t1 AT1G48410 33.650 948 526 27 12 900 144 1047 1.60e-152 476
MS.gene99379.t1 AT1G48410 33.614 949 527 27 12 900 144 1049 3.16e-152 476
MS.gene99379.t1 AT1G48410 33.614 949 527 27 12 900 144 1049 3.16e-152 476
MS.gene99379.t1 AT1G69440 29.854 891 529 32 47 900 158 989 1.82e-106 352
MS.gene99379.t1 AT1G31280 29.271 878 515 30 20 857 146 957 1.33e-95 323
MS.gene99379.t1 AT1G31290 29.452 876 507 27 31 859 254 1065 1.33e-92 317
MS.gene99379.t1 AT1G31290 29.452 876 507 27 31 859 292 1103 1.73e-92 317
MS.gene99379.t1 AT1G31290 29.452 876 507 27 31 859 328 1139 2.68e-92 317

Find 221 sgRNAs with CRISPR-Local

Find 383 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAGTTGCATGCCCCTTTA+AGG 0.121508 5.1:-69304843 None:intergenic
GAAAGTTCCTACTCTCATTT+TGG 0.127511 5.1:+69307666 MS.gene99379:CDS
CCAACATCATTGAACTTCTT+TGG 0.146276 5.1:-69305047 None:intergenic
ACATATGTTTCTGAGCTTAA+TGG 0.149777 5.1:+69304515 MS.gene99379:CDS
AACTTGGAACCCCAAGTTTA+TGG 0.195760 5.1:+69308660 MS.gene99379:CDS
GGCCATTGCCGATGCCTTAA+AGG 0.196354 5.1:+69304829 MS.gene99379:CDS
GGTCGTTGTGAAAGAAATTT+TGG 0.202097 5.1:-69305025 None:intergenic
ATCTTGTACTCTTGGTTAGA+TGG 0.234083 5.1:-69305476 None:intergenic
TTTGATGTCTTTGAAGAAAA+TGG 0.240022 5.1:+69307139 MS.gene99379:CDS
AACACATTATCATGTTCTTT+TGG 0.251490 5.1:+69309477 MS.gene99379:CDS
ATGCCCTATATTTAGATATC+AGG 0.258968 5.1:-69307886 None:intergenic
CAGACTCTCTTATGTAAGTT+TGG 0.260770 5.1:-69309897 None:intergenic
CCAGCGCCTTTCCCTTCAAC+AGG 0.272190 5.1:-69304464 None:intergenic
CAACATCATTGAACTTCTTT+GGG 0.281633 5.1:-69305046 None:intergenic
TTTCCACAAGGGAAGATCTT+TGG 0.296508 5.1:-69306159 None:intergenic
AGGAAGAACTCTGATCTTTA+TGG 0.298034 5.1:+69307268 MS.gene99379:CDS
TGAGTTATACAGTTGATGTT+TGG 0.300652 5.1:+69306765 MS.gene99379:intron
ATCTTCATTGGTTTAACATT+AGG 0.301189 5.1:-69304172 None:intergenic
ATTTAAGAACCTCGATGATT+TGG 0.301451 5.1:-69308549 None:intergenic
TTTCAGTCTTGACTGGAATA+AGG 0.302768 5.1:+69305303 MS.gene99379:CDS
ATATTGTTTCCAGAAAATTA+TGG 0.306753 5.1:+69306920 MS.gene99379:intron
AGCTTCAAATCTACCTCAAT+TGG 0.309723 5.1:-69305822 None:intergenic
GAAGTTCCACCTCCCATTCC+TGG 0.316069 5.1:-69306808 None:intergenic
AGCTCCTGTTCTATCTTCAT+TGG 0.317522 5.1:-69304184 None:intergenic
AGAGTTATCAAGAAGCCATT+AGG 0.320188 5.1:+69304864 MS.gene99379:CDS
AAGAAGAGAGGTGCTGTTCC+TGG 0.327850 5.1:+69305675 MS.gene99379:CDS
GCCATTGCCGATGCCTTAAA+GGG 0.342873 5.1:+69304830 MS.gene99379:CDS
GGCCCCTGATATCTAAATAT+AGG 0.349322 5.1:+69307882 MS.gene99379:CDS
TTGGAGTGTGGACAGGGCTT+TGG 0.350730 5.1:-69306140 None:intergenic
GCCCCTGATATCTAAATATA+GGG 0.356851 5.1:+69307883 MS.gene99379:CDS
GAGTTATACAGTTGATGTTT+GGG 0.357593 5.1:+69306766 MS.gene99379:intron
TAAAAGATGAAGGAATTATA+AGG 0.366493 5.1:+69307990 MS.gene99379:CDS
CACGCTAAGTCTAAACTTCC+TGG 0.370217 5.1:+69307211 MS.gene99379:CDS
TTGAAGAAAATGGTCAGTTT+AGG 0.370672 5.1:+69307149 MS.gene99379:CDS
TTACCAGGTGGCACATTGTC+TGG 0.370941 5.1:-69308733 None:intergenic
GGAACAATGGGAGGTGGTGG+GGG 0.372497 5.1:-69304148 None:intergenic
GGGATATATGTGGGTCGCTT+TGG 0.372711 5.1:-69305801 None:intergenic
GGTGGAACAATGGGAGGTGG+TGG 0.374637 5.1:-69304151 None:intergenic
GCAAAACATTTGTCAGATAC+TGG 0.376058 5.1:-69307464 None:intergenic
AACCAAGAGTACAAGATAAC+CGG 0.382850 5.1:+69305482 MS.gene99379:CDS
GCCCGGTTATCTTGTACTCT+TGG 0.382965 5.1:-69305484 None:intergenic
GTAAATTTCTTGATGAAACT+TGG 0.385377 5.1:+69308644 MS.gene99379:CDS
GGTGGTGTACTTGGATGTAA+TGG 0.387175 5.1:+69305071 MS.gene99379:CDS
CCAATGGCTAGGCGTGGCTT+AGG 0.388666 5.1:+69304235 MS.gene99379:CDS
TGGAACAATGGGAGGTGGTG+GGG 0.405915 5.1:-69304149 None:intergenic
GAGTTATCAAGAAGCCATTA+GGG 0.407158 5.1:+69304865 MS.gene99379:CDS
TATCCTCTTCTTATCAGGGC+TGG 0.412082 5.1:-69304741 None:intergenic
AAGAAGAATCTTGCGGAAGT+TGG 0.413709 5.1:+69307402 MS.gene99379:CDS
TGAGTTCAACGTTCAAAACT+TGG 0.415160 5.1:-69308525 None:intergenic
AGAAGCCACAAGAGCGGATG+AGG 0.415926 5.1:+69306191 MS.gene99379:CDS
ACTTTGAGTGGTTCTGAAGC+TGG 0.416494 5.1:-69305102 None:intergenic
GCAAGATTCTTCTTCTTCCA+TGG 0.420877 5.1:-69307393 None:intergenic
GTAGGAACTTTCGACACAAT+AGG 0.422461 5.1:-69307655 None:intergenic
GATAATATCAAGAACCCTAA+TGG 0.425665 5.1:-69304879 None:intergenic
TCTTGTACTCTTGGTTAGAT+GGG 0.431925 5.1:-69305475 None:intergenic
AGCAACAATCACCATAAACT+TGG 0.436409 5.1:-69308671 None:intergenic
GTTCAAGCCAGTGTCTGATA+AGG 0.438950 5.1:+69307952 MS.gene99379:CDS
TTGAAGATGTCACTTCAAAC+AGG 0.440092 5.1:+69304621 MS.gene99379:CDS
TCCAATCTGCTATGCACACT+TGG 0.440194 5.1:+69309779 MS.gene99379:CDS
AAAGGACTCTGAAGAATTTG+AGG 0.442534 5.1:+69305441 MS.gene99379:CDS
GATGTTTCTCATGGTTCACC+TGG 0.446031 5.1:+69307694 MS.gene99379:CDS
TTTATTACCGCAGCAATTGA+AGG 0.447881 5.1:-69307730 None:intergenic
CACTTGGCTGCTTCTCAAGT+TGG 0.448504 5.1:+69309795 MS.gene99379:CDS
TGCTTCGAAAATTCCTCTGC+AGG 0.449230 5.1:+69304808 MS.gene99379:CDS
GCGTTGAAAACAAGCGACTA+TGG 0.451046 5.1:+69306305 MS.gene99379:CDS
GTGGTGTACTTGGATGTAAT+GGG 0.455828 5.1:+69305072 MS.gene99379:CDS
CTCAGTGCATAGCTCCTACC+AGG 0.456685 5.1:+69307433 MS.gene99379:CDS
AAGATCTTTGGAGTGTGGAC+AGG 0.461294 5.1:-69306147 None:intergenic
CAACTTTCGAACCCTGAGTT+CGG 0.461811 5.1:-69307913 None:intergenic
GAGATCCTTTCAGTCTTGAC+TGG 0.466546 5.1:+69305296 MS.gene99379:CDS
CCTGTTGAAGGGAAAGGCGC+TGG 0.466871 5.1:+69304464 MS.gene99379:CDS
GGGCTTTGGTATAGCGTTGA+AGG 0.467408 5.1:-69306126 None:intergenic
TGGACAGTTCATGAAATTTG+AGG 0.469187 5.1:+69309815 MS.gene99379:CDS
TTCATTGGTTTAACATTAGG+TGG 0.470116 5.1:-69304169 None:intergenic
TCTGAGTTCACAAAAGTTGA+TGG 0.472133 5.1:+69306368 MS.gene99379:CDS
TAGGAACTTTCGACACAATA+GGG 0.474487 5.1:-69307654 None:intergenic
CTAGCCATTGGAGTCTTAGT+AGG 0.475521 5.1:-69304223 None:intergenic
GATGTTGGAGGTGGTGTACT+TGG 0.475773 5.1:+69305062 MS.gene99379:CDS
TGCCCTATATTTAGATATCA+GGG 0.478254 5.1:-69307885 None:intergenic
GCCAAGTGTGCATAGCAGAT+TGG 0.480898 5.1:-69309780 None:intergenic
TTGGGCATGGATGTTTCTCA+TGG 0.483692 5.1:+69307685 MS.gene99379:CDS
ACAAGCTCCTGTAAATCATC+TGG 0.485756 5.1:-69309517 None:intergenic
ATCTGCCATGTATTAATGTC+GGG 0.486469 5.1:+69305775 MS.gene99379:CDS
GAGGTGGAACTTCAATAATA+AGG 0.488802 5.1:+69306818 MS.gene99379:CDS
AATTTACTTGTGAAGGTCCA+TGG 0.491422 5.1:+69307376 MS.gene99379:intron
CCAAAGAAGTTCAATGATGT+TGG 0.492529 5.1:+69305047 MS.gene99379:CDS
GCTTCAAATCTACCTCAATT+GGG 0.494446 5.1:-69305821 None:intergenic
AGATCAGAGTTCTTCCTCTC+AGG 0.495404 5.1:-69307262 None:intergenic
TAAACCAATGAAGATAGAAC+AGG 0.501410 5.1:+69304180 MS.gene99379:CDS
AGTAGAAACTCAGGTGGCCC+AGG 0.503206 5.1:-69307229 None:intergenic
TCATGTTCCTTATCAGACAC+TGG 0.503274 5.1:-69307959 None:intergenic
TAGGGCATGTGTCCGAACTC+AGG 0.503580 5.1:+69307901 MS.gene99379:CDS
GAAGACGGACGCCCTGTTGA+AGG 0.504080 5.1:+69304452 MS.gene99379:CDS
TACCTCAATTGGGATATATG+TGG 0.504356 5.1:-69305811 None:intergenic
AAGTTCCACCTCCCATTCCT+GGG 0.505789 5.1:-69306807 None:intergenic
TGCATGCCCCTTTAAGGCAT+CGG 0.509226 5.1:-69304837 None:intergenic
CAATGGCTAGGCGTGGCTTA+GGG 0.510534 5.1:+69304236 MS.gene99379:CDS
CCCCTTTAAGGCATCGGCAA+TGG 0.513532 5.1:-69304831 None:intergenic
CCTAAGCCACGCCTAGCCAT+TGG 0.513589 5.1:-69304235 None:intergenic
AGTGGATTGTCTCTGAACAT+AGG 0.513605 5.1:+69305122 MS.gene99379:CDS
AAGATTTCAATCCCAGGAAT+GGG 0.514505 5.1:+69306796 MS.gene99379:CDS
CTGAAAATGATGATATTGTC+CGG 0.514879 5.1:-69308373 None:intergenic
GAAGGAATTATAAAAGATGA+AGG 0.515056 5.1:+69307980 MS.gene99379:CDS
ACAACCATGATTGTACGTCC+TGG 0.516929 5.1:+69305235 MS.gene99379:CDS
CATTGTCTGGAGATCGAGGT+TGG 0.519763 5.1:-69308720 None:intergenic
TTAACATTAGGTGGAACAAT+GGG 0.521386 5.1:-69304160 None:intergenic
CAGAGACAATCCACTTTGAG+TGG 0.522358 5.1:-69305114 None:intergenic
AGCTTCAGAACCACTCAAAG+TGG 0.523148 5.1:+69305104 MS.gene99379:CDS
AGGAAGTCAACCACAGGCCC+AGG 0.524060 5.1:-69305253 None:intergenic
TCCTCAGTATCATCTTCTCC+AGG 0.525003 5.1:-69305693 None:intergenic
TATGTAAGTTTGGCAACTGT+GGG 0.525059 5.1:-69309887 None:intergenic
AAGACCCTCATCCGCTCTTG+TGG 0.527495 5.1:-69306196 None:intergenic
GAAGATTTCAATCCCAGGAA+TGG 0.528974 5.1:+69306795 MS.gene99379:CDS
ACAGCAAAATTTGTCATCCT+AGG 0.529186 5.1:+69308855 MS.gene99379:CDS
AGCAGACAAAGTAGAAACTC+AGG 0.530875 5.1:-69307238 None:intergenic
GTGGAACAATGGGAGGTGGT+GGG 0.531726 5.1:-69304150 None:intergenic
ATAAAATGTGGAAGAATGAA+AGG 0.536134 5.1:+69307020 MS.gene99379:CDS
GCACGGAAATTCGCTCAGCC+CGG 0.542397 5.1:-69305501 None:intergenic
GGACGCCCTGTTGAAGGGAA+AGG 0.544084 5.1:+69304458 MS.gene99379:CDS
TCAATCCCAGGAATGGGAGG+TGG 0.546294 5.1:+69306802 MS.gene99379:CDS
CAACCATGATTGTACGTCCT+GGG 0.546323 5.1:+69305236 MS.gene99379:CDS
CTTCCCTTGTGGAAAAGTCT+AGG 0.546591 5.1:+69306167 MS.gene99379:CDS
TAGGCGTGGCTTAGGGACGA+AGG 0.548886 5.1:+69304243 MS.gene99379:CDS
CAACTTTATAAGTCTTCGAA+CGG 0.549728 5.1:-69304775 None:intergenic
GCAACAATCACCATAAACTT+GGG 0.557213 5.1:-69308670 None:intergenic
GGCGCTGGGAGGAAGATACT+TGG 0.558664 5.1:+69304479 MS.gene99379:CDS
AGAGCGGATGAGGGTCTTGT+CGG 0.559054 5.1:+69306201 MS.gene99379:CDS
GAGAAGACTCTGTTCACAAT+CGG 0.560053 5.1:+69304560 MS.gene99379:CDS
ACGCTAAGTCTAAACTTCCT+GGG 0.560741 5.1:+69307212 MS.gene99379:CDS
ACCTCAATTGGGATATATGT+GGG 0.560837 5.1:-69305810 None:intergenic
AGATCTTTGGAGTGTGGACA+GGG 0.562024 5.1:-69306146 None:intergenic
GGAAAAGACCTTGCTTATGA+CGG 0.562480 5.1:+69304536 MS.gene99379:CDS
ATACAGTTGATGTTTGGGAA+TGG 0.562563 5.1:+69306771 MS.gene99379:intron
AAAAGAACATGATAATGTGT+TGG 0.562841 5.1:-69309475 None:intergenic
GGCTTCCCGACATTAATACA+TGG 0.563279 5.1:-69305780 None:intergenic
CTGTTGAAGGGAAAGGCGCT+GGG 0.563656 5.1:+69304465 MS.gene99379:CDS
AACTTTCGACACAATAGGGA+TGG 0.563776 5.1:-69307650 None:intergenic
TTATGTAAGTTTGGCAACTG+TGG 0.564381 5.1:-69309888 None:intergenic
AGGGCATGTGTCCGAACTCA+GGG 0.564985 5.1:+69307902 MS.gene99379:CDS
TGAATGTTGCTAACACAGAT+GGG 0.567590 5.1:+69304302 MS.gene99379:CDS
GTTCACAAAAGTTGATGGGA+GGG 0.568673 5.1:+69306373 MS.gene99379:CDS
AATTACAGCTGGTCTTTGCA+CGG 0.569959 5.1:-69305518 None:intergenic
TCAAAGTGATTTGTTAACAA+AGG 0.572097 5.1:-69304277 None:intergenic
TTTAACATTAGGTGGAACAA+TGG 0.572957 5.1:-69304161 None:intergenic
AAGACGGACGCCCTGTTGAA+GGG 0.576702 5.1:+69304453 MS.gene99379:CDS
GATCTGCCATGTATTAATGT+CGG 0.578286 5.1:+69305774 MS.gene99379:CDS
GGCTTTGGTATAGCGTTGAA+GGG 0.578616 5.1:-69306125 None:intergenic
GTTTAGGCGTGCACCGCCTG+TGG 0.579359 5.1:+69307165 MS.gene99379:CDS
AGGCCCAGGACGTACAATCA+TGG 0.579593 5.1:-69305239 None:intergenic
TCTCCAGACAATGTGCCACC+TGG 0.581107 5.1:+69308730 MS.gene99379:CDS
TTCTCAACTCTGACCACAGG+CGG 0.583005 5.1:-69307178 None:intergenic
AAGAAGTTCAATGATGTTGG+AGG 0.583327 5.1:+69305050 MS.gene99379:CDS
TTATTCCAGTCAAGACTGAA+AGG 0.584520 5.1:-69305301 None:intergenic
AGTTTGGCAACTGTGGGATG+AGG 0.584759 5.1:-69309881 None:intergenic
CTGAGTTCACAAAAGTTGAT+GGG 0.585192 5.1:+69306369 MS.gene99379:CDS
CTACTAAGACTCCAATGGCT+AGG 0.585767 5.1:+69304224 MS.gene99379:CDS
TACTTTGTCTGCTTCCTGAG+AGG 0.586786 5.1:+69307248 MS.gene99379:CDS
ACCCACATATATCCCAATTG+AGG 0.591113 5.1:+69305809 MS.gene99379:CDS
CAGCGCCTTTCCCTTCAACA+GGG 0.591713 5.1:-69304463 None:intergenic
TGGTATTGCAGGAACTGTTG+TGG 0.591832 5.1:+69308832 MS.gene99379:intron
TATGTTCTCAGGGTACAAGC+AGG 0.592354 5.1:+69309452 MS.gene99379:intron
AGCACCACTGCTATTTCTGT+CGG 0.595497 5.1:+69309670 MS.gene99379:CDS
GTGAATGTTGCTAACACAGA+TGG 0.596476 5.1:+69304301 MS.gene99379:CDS
ATGGCGAAGATTTCAATCCC+AGG 0.596896 5.1:+69306790 MS.gene99379:CDS
GTTTGGCAACTGTGGGATGA+GGG 0.597169 5.1:-69309880 None:intergenic
TCTGAAGAATTTGAGGATCA+CGG 0.600179 5.1:+69305448 MS.gene99379:CDS
CAGATACTGGTCATTAACCC+TGG 0.602238 5.1:-69307451 None:intergenic
TTAGGTGGAACAATGGGAGG+TGG 0.602555 5.1:-69304154 None:intergenic
GAAGGAATGTCAGATTGCCC+AGG 0.602653 5.1:-69307712 None:intergenic
TCTGAAGCTTCCTCGAGCCA+AGG 0.603304 5.1:+69309843 MS.gene99379:CDS
ACACCAGCCCTGATAAGAAG+AGG 0.605422 5.1:+69304738 MS.gene99379:CDS
AGGTTGTTAGCTCGAGGCAA+TGG 0.606988 5.1:+69307861 MS.gene99379:intron
TCTTCTCGCCGTCATAAGCA+AGG 0.608245 5.1:-69304544 None:intergenic
TCCATGCCCAAAATGAGAGT+AGG 0.610630 5.1:-69307673 None:intergenic
TGACATTCCTTCAATTGCTG+CGG 0.612470 5.1:+69307723 MS.gene99379:CDS
AGTTCACAAAAGTTGATGGG+AGG 0.613338 5.1:+69306372 MS.gene99379:CDS
ATTCAGAATATGAGTTCACA+AGG 0.617684 5.1:+69304109 None:intergenic
GGCACATTGTCTGGAGATCG+AGG 0.617706 5.1:-69308724 None:intergenic
TTTGCTGAAGATCAATGCAA+AGG 0.619675 5.1:+69307482 MS.gene99379:CDS
ACATTAGGTGGAACAATGGG+AGG 0.620734 5.1:-69304157 None:intergenic
TCTTCAAAGACATCAAAAGG+TGG 0.623654 5.1:-69307133 None:intergenic
GATTGTACGTCCTGGGCCTG+TGG 0.625876 5.1:+69305243 MS.gene99379:CDS
TCTGCACGCTGTGATGTGCG+AGG 0.626472 5.1:+69306981 MS.gene99379:CDS
GCTTCCTACTAAGACTCCAA+TGG 0.626834 5.1:+69304219 MS.gene99379:CDS
ATTTCAATCCCAGGAATGGG+AGG 0.627870 5.1:+69306799 MS.gene99379:CDS
GCAATTAGGAAGTCAACCAC+AGG 0.628616 5.1:-69305259 None:intergenic
TAGTTCTGAGGAAAGACGAC+CGG 0.628720 5.1:+69308354 MS.gene99379:CDS
ACTCCAAAGATCTTCCCTTG+TGG 0.628844 5.1:+69306156 MS.gene99379:CDS
AAGGGAAGATCTTTGGAGTG+TGG 0.631222 5.1:-69306152 None:intergenic
GTGTCTGATAAGGAACATGA+AGG 0.631854 5.1:+69307962 MS.gene99379:CDS
ATATGTAGGTTGTTAGCTCG+AGG 0.632028 5.1:+69307855 MS.gene99379:intron
AAGTTCAATGATGTTGGAGG+TGG 0.633799 5.1:+69305053 MS.gene99379:CDS
ATTGATACCACCTTGGCTCG+AGG 0.633939 5.1:-69309853 None:intergenic
GCATCGGCAATGGCCTGCAG+AGG 0.634030 5.1:-69304821 None:intergenic
AGGTTTACTCTGAAGAAGAG+AGG 0.635949 5.1:+69305663 MS.gene99379:intron
ACCAAGAGTACAAGATAACC+GGG 0.637792 5.1:+69305483 MS.gene99379:CDS
TATGAGTTCACAAGGACACA+AGG 0.637843 5.1:+69304117 None:intergenic
TCCTGGAGAAGATGATACTG+AGG 0.643602 5.1:+69305692 MS.gene99379:CDS
CTAGGCAGAAGCCACAAGAG+CGG 0.652116 5.1:+69306185 MS.gene99379:CDS
GGGAGGCATTGATACCACCT+TGG 0.656005 5.1:-69309860 None:intergenic
GAGCGAATGCTACGTAACTG+TGG 0.659030 5.1:+69306332 MS.gene99379:CDS
ATGGAAGAAGAAGAATCTTG+CGG 0.662730 5.1:+69307395 MS.gene99379:CDS
CAACAATCACCATAAACTTG+GGG 0.663843 5.1:-69308669 None:intergenic
ATGTTTCTCATGGTTCACCT+GGG 0.664179 5.1:+69307695 MS.gene99379:CDS
GAAGCCACAAGAGCGGATGA+GGG 0.664428 5.1:+69306192 MS.gene99379:CDS
TGGCAACTGTGGGATGAGGG+AGG 0.664690 5.1:-69309877 None:intergenic
TGATGTGCGAGGACTTGTGA+GGG 0.666371 5.1:+69306992 MS.gene99379:CDS
AGGCGTGGCTTAGGGACGAA+GGG 0.667402 5.1:+69304244 MS.gene99379:CDS
CCATTGCCGATGCCTTAAAG+GGG 0.668294 5.1:+69304831 MS.gene99379:CDS
AAGACTCCAATGGCTAGGCG+TGG 0.674690 5.1:+69304229 MS.gene99379:CDS
GTGATGTGCGAGGACTTGTG+AGG 0.675054 5.1:+69306991 MS.gene99379:CDS
GTGAGGGATCTGATAAAATG+TGG 0.676503 5.1:+69307008 MS.gene99379:CDS
GCCCTATATTTAGATATCAG+GGG 0.682408 5.1:-69307884 None:intergenic
TTGAAGGGAAAGGCGCTGGG+AGG 0.682795 5.1:+69304468 MS.gene99379:CDS
GAAGCTTCCTCGAGCCAAGG+TGG 0.691119 5.1:+69309846 MS.gene99379:CDS
TACTGGTCATTAACCCTGGT+AGG 0.692148 5.1:-69307447 None:intergenic
AGACAAAGTAGAAACTCAGG+TGG 0.699917 5.1:-69307235 None:intergenic
TGTATGACAACAGTTATCAG+CGG 0.706525 5.1:+69309647 MS.gene99379:intron
TCAGTGCATAGCTCCTACCA+GGG 0.714408 5.1:+69307434 MS.gene99379:CDS
TGAACTCAGCCAAATCATCG+AGG 0.745228 5.1:+69308540 MS.gene99379:CDS
CTTACCGACAGAAATAGCAG+TGG 0.760890 5.1:-69309674 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTATATATAAAAAAA+TGG - chr5.1:69308787-69308806 None:intergenic 0.0%
!! AATATAATTAATGTTATTGT+AGG + chr5.1:69308476-69308495 MS.gene99379:intron 10.0%
!! ATATAATTAATGTTATTGTA+GGG + chr5.1:69308477-69308496 MS.gene99379:intron 10.0%
!!! ATATATATTGTTTTTTTTTG+GGG + chr5.1:69308590-69308609 MS.gene99379:intron 10.0%
!! ATAATATTAAAAGAAACCAA+AGG - chr5.1:69307521-69307540 None:intergenic 15.0%
!! ATATAAAAATCATAATTCCT+AGG - chr5.1:69308875-69308894 None:intergenic 15.0%
!! CATTTACAAAATCTATAAAT+TGG + chr5.1:69305914-69305933 MS.gene99379:intron 15.0%
!! CCTTCTTAATAAAAATTAAT+TGG + chr5.1:69307352-69307371 MS.gene99379:intron 15.0%
!! TAACAAATGCATTAAAAAAA+AGG - chr5.1:69307327-69307346 None:intergenic 15.0%
!!! CCAATTAATTTTTATTAAGA+AGG - chr5.1:69307355-69307374 None:intergenic 15.0%
!!! TATATATTGTTTTTTTTTGG+GGG + chr5.1:69308591-69308610 MS.gene99379:intron 15.0%
!!! TCAATATATGTATTTTCATT+GGG + chr5.1:69309053-69309072 MS.gene99379:intron 15.0%
!!! TTCAATATATGTATTTTCAT+TGG + chr5.1:69309052-69309071 MS.gene99379:intron 15.0%
!!! TTTTTAATGCATTTGTTAAA+TGG + chr5.1:69307329-69307348 MS.gene99379:intron 15.0%
!! AAAAAAAGGTAAATAGAACA+TGG - chr5.1:69307313-69307332 None:intergenic 20.0%
!! AAAATTTCTTCCAAAAGTAA+TGG - chr5.1:69306631-69306650 None:intergenic 20.0%
!! AACCTGTTAAAATAAAAAAC+TGG + chr5.1:69306943-69306962 MS.gene99379:CDS 20.0%
!! AATAATTTCAAGGAAAAACT+TGG - chr5.1:69308034-69308053 None:intergenic 20.0%
!! AATATTATTTCCTGATTTAC+AGG + chr5.1:69306283-69306302 MS.gene99379:intron 20.0%
!! ACCTGTTAAAATAAAAAACT+GGG + chr5.1:69306944-69306963 MS.gene99379:CDS 20.0%
!! ATATTGTTTCCAGAAAATTA+TGG + chr5.1:69306920-69306939 MS.gene99379:intron 20.0%
!! ATGAGTATAACAAAAAGTTA+AGG - chr5.1:69305367-69305386 None:intergenic 20.0%
!! ATTACACAATCAACTTAAAA+TGG - chr5.1:69305552-69305571 None:intergenic 20.0%
!! ATTACAGATTATTATCAGAA+TGG - chr5.1:69309372-69309391 None:intergenic 20.0%
!! CTACACAATAAAATATACAA+GGG - chr5.1:69305417-69305436 None:intergenic 20.0%
!! GAAAATACATATATTGAACT+CGG - chr5.1:69309050-69309069 None:intergenic 20.0%
!! TAAAAGATGAAGGAATTATA+AGG + chr5.1:69307990-69308009 MS.gene99379:CDS 20.0%
!! TAATTATAACCATGTAAATC+AGG - chr5.1:69309283-69309302 None:intergenic 20.0%
!! TAGTTTGATAAATAAGTACA+AGG - chr5.1:69309434-69309453 None:intergenic 20.0%
!! TTACACAATCAACTTAAAAT+GGG - chr5.1:69305551-69305570 None:intergenic 20.0%
!!! AAAATAATCACCATTACTTT+TGG + chr5.1:69306618-69306637 MS.gene99379:intron 20.0%
!!! AGTTGATGGTTTATTTATTT+TGG + chr5.1:69308285-69308304 MS.gene99379:intron 20.0%
!!! ATCTAAATCTTTCAAGTTTT+AGG + chr5.1:69308618-69308637 MS.gene99379:intron 20.0%
!!! ATGTGTATATATGTTCTTTT+AGG + chr5.1:69309003-69309022 MS.gene99379:intron 20.0%
!!! GTTGATGGTTTATTTATTTT+GGG + chr5.1:69308286-69308305 MS.gene99379:intron 20.0%
!!! TATTTAACTTTGCCTTTTAT+AGG + chr5.1:69304705-69304724 MS.gene99379:intron 20.0%
!!! TTTTATGTATGTTTTGTTGA+TGG + chr5.1:69306866-69306885 MS.gene99379:intron 20.0%
!!! TTTTTCCTTGAAATTATTTC+AGG + chr5.1:69308036-69308055 MS.gene99379:intron 20.0%
! AATAAAATATACAAGGGATC+AGG - chr5.1:69305411-69305430 None:intergenic 25.0%
! AATAACAGCGAATGAATTAA+GGG - chr5.1:69306475-69306494 None:intergenic 25.0%
! AATAGCTAATACACATTATG+AGG - chr5.1:69305868-69305887 None:intergenic 25.0%
! AATTAATGTTATTGTAGGGA+TGG + chr5.1:69308481-69308500 MS.gene99379:intron 25.0%
! AATTGGAAATTTACTTGTGA+AGG + chr5.1:69307369-69307388 MS.gene99379:intron 25.0%
! ACATATGTAGACATTTACAT+GGG - chr5.1:69307841-69307860 None:intergenic 25.0%
! AGGTATATTAATTCTTCCTT+TGG + chr5.1:69307502-69307521 MS.gene99379:intron 25.0%
! ATAAAATGTGGAAGAATGAA+AGG + chr5.1:69307020-69307039 MS.gene99379:CDS 25.0%
! ATACACAAAATCTTGATTAC+TGG + chr5.1:69309092-69309111 MS.gene99379:intron 25.0%
! ATATAATTTACCTAGTCTCT+CGG + chr5.1:69305890-69305909 MS.gene99379:intron 25.0%
! ATCGACATGCAATAAAATAT+AGG - chr5.1:69308076-69308095 None:intergenic 25.0%
! ATCTTTGTAATATCTATCAC+AGG + chr5.1:69304985-69305004 MS.gene99379:intron 25.0%
! ATGTAAATGTCTACATATGT+AGG + chr5.1:69307841-69307860 MS.gene99379:intron 25.0%
! ATTTACGGACAAACATAAAA+AGG + chr5.1:69307066-69307085 MS.gene99379:intron 25.0%
! ATTTATCAAACTATGTTCTC+AGG + chr5.1:69309441-69309460 MS.gene99379:intron 25.0%
! CAACAATATAACTATCAAAC+AGG - chr5.1:69306660-69306679 None:intergenic 25.0%
! CCTACACAATAAAATATACA+AGG - chr5.1:69305418-69305437 None:intergenic 25.0%
! CGAAAATAGTTATCAAGTAT+TGG - chr5.1:69306067-69306086 None:intergenic 25.0%
! CTTATGTGTAAGTTTACATT+TGG + chr5.1:69309551-69309570 MS.gene99379:intron 25.0%
! GAAGGAATTATAAAAGATGA+AGG + chr5.1:69307980-69307999 MS.gene99379:CDS 25.0%
! GTAAATTTCTTGATGAAACT+TGG + chr5.1:69308644-69308663 MS.gene99379:CDS 25.0%
! GTTTCAGAAAGAAAAGAAAA+TGG - chr5.1:69306020-69306039 None:intergenic 25.0%
! TACATATGTAGACATTTACA+TGG - chr5.1:69307842-69307861 None:intergenic 25.0%
! TAGAACATGGAAATATATCA+AGG - chr5.1:69307300-69307319 None:intergenic 25.0%
! TCATAATGTGTATTAGCTAT+TGG + chr5.1:69305867-69305886 MS.gene99379:intron 25.0%
! TCGACATGCAATAAAATATA+GGG - chr5.1:69308075-69308094 None:intergenic 25.0%
! TCTAATATTCAAAGATCGAT+TGG + chr5.1:69308100-69308119 MS.gene99379:intron 25.0%
! TCTTTGTAATATCTATCACA+GGG + chr5.1:69304986-69305005 MS.gene99379:intron 25.0%
! TTTACGGACAAACATAAAAA+GGG + chr5.1:69307067-69307086 MS.gene99379:intron 25.0%
! TTTATCAAACTATGTTCTCA+GGG + chr5.1:69309442-69309461 MS.gene99379:intron 25.0%
! TTTATGACTTTCTTAATGTC+TGG + chr5.1:69305575-69305594 MS.gene99379:intron 25.0%
!! AAAAGAACATGATAATGTGT+TGG - chr5.1:69309478-69309497 None:intergenic 25.0%
!! AACACATTATCATGTTCTTT+TGG + chr5.1:69309477-69309496 MS.gene99379:CDS 25.0%
!! ATTTTATTGTGTAGGCTAAA+AGG + chr5.1:69305423-69305442 MS.gene99379:intron 25.0%
!! CCTTGTATATTTTATTGTGT+AGG + chr5.1:69305415-69305434 MS.gene99379:intron 25.0%
!! GATTTTATTCTTTTGTAGCT+TGG + chr5.1:69307589-69307608 MS.gene99379:intron 25.0%
!! TATTCTATTTCGTTTGCTTT+TGG + chr5.1:69307098-69307117 MS.gene99379:intron 25.0%
!! TATTTTATTGCATGTCGATA+AGG + chr5.1:69308077-69308096 MS.gene99379:intron 25.0%
!! TTTGATGTCTTTGAAGAAAA+TGG + chr5.1:69307139-69307158 MS.gene99379:CDS 25.0%
!! TTTTCTTCAAAGACATCAAA+AGG - chr5.1:69307139-69307158 None:intergenic 25.0%
!! TTTTTATCCTCTTCTTATCA+GGG - chr5.1:69304748-69304767 None:intergenic 25.0%
!!! ATCTTCATTGGTTTAACATT+AGG - chr5.1:69304175-69304194 None:intergenic 25.0%
!!! CTTTTGAAAATATGTCTCTA+AGG + chr5.1:69307770-69307789 MS.gene99379:intron 25.0%
!!! GGTTTATTTATTTTGGGAAT+TGG + chr5.1:69308292-69308311 MS.gene99379:intron 25.0%
!!! TCAAAGTGATTTGTTAACAA+AGG - chr5.1:69304280-69304299 None:intergenic 25.0%
!!! TTTTTTATCCTCTTCTTATC+AGG - chr5.1:69304749-69304768 None:intergenic 25.0%
AAGATAACTTGAAGTCTTCA+AGG - chr5.1:69309343-69309362 None:intergenic 30.0%
AGGAACAATTAGCAAAACAA+AGG - chr5.1:69305347-69305366 None:intergenic 30.0%
AGTCAGTCGTTGAAAAAATT+AGG - chr5.1:69308136-69308155 None:intergenic 30.0%
ATGATAGAATGCAAGCAAAA+AGG - chr5.1:69309395-69309414 None:intergenic 30.0%
ATGCCCTATATTTAGATATC+AGG - chr5.1:69307889-69307908 None:intergenic 30.0%
ATGTCAAGCATTCAAAGAAA+TGG - chr5.1:69306591-69306610 None:intergenic 30.0%
ATTTAAGAACCTCGATGATT+TGG - chr5.1:69308552-69308571 None:intergenic 30.0%
CAACATCATTGAACTTCTTT+GGG - chr5.1:69305049-69305068 None:intergenic 30.0%
CAACTTTATAAGTCTTCGAA+CGG - chr5.1:69304778-69304797 None:intergenic 30.0%
CAATAACAGCGAATGAATTA+AGG - chr5.1:69306476-69306495 None:intergenic 30.0%
CTGAAAATGATGATATTGTC+CGG - chr5.1:69308376-69308395 None:intergenic 30.0%
CTTTGTAATATCTATCACAG+GGG + chr5.1:69304987-69305006 MS.gene99379:intron 30.0%
GATAATATCAAGAACCCTAA+TGG - chr5.1:69304882-69304901 None:intergenic 30.0%
GATGAGAATATAGACAACAA+AGG - chr5.1:69305161-69305180 None:intergenic 30.0%
TAAAATAAAAAACTGGGCTG+TGG + chr5.1:69306950-69306969 MS.gene99379:CDS 30.0%
TAAACCAATGAAGATAGAAC+AGG + chr5.1:69304180-69304199 MS.gene99379:CDS 30.0%
TCCCCAAATTACATGATAAA+CGG - chr5.1:69309129-69309148 None:intergenic 30.0%
TGATAAAAGAACAATACCCT+TGG - chr5.1:69306410-69306429 None:intergenic 30.0%
TGCCCTATATTTAGATATCA+GGG - chr5.1:69307888-69307907 None:intergenic 30.0%
TTAACATTAGGTGGAACAAT+GGG - chr5.1:69304163-69304182 None:intergenic 30.0%
TTACGGACAAACATAAAAAG+GGG + chr5.1:69307068-69307087 MS.gene99379:intron 30.0%
TTGAAGAAAATGGTCAGTTT+AGG + chr5.1:69307149-69307168 MS.gene99379:CDS 30.0%
TTTAACATTAGGTGGAACAA+TGG - chr5.1:69304164-69304183 None:intergenic 30.0%
TTTATCATGTAATTTGGGGA+TGG + chr5.1:69309129-69309148 MS.gene99379:intron 30.0%
! AAAGTTCCTACTCTCATTTT+GGG + chr5.1:69307667-69307686 MS.gene99379:CDS 30.0%
! ACATATGTTTCTGAGCTTAA+TGG + chr5.1:69304515-69304534 MS.gene99379:CDS 30.0%
! ATATCTAGCTAACCTCTTTT+TGG + chr5.1:69308812-69308831 MS.gene99379:intron 30.0%
! GAGTTATACAGTTGATGTTT+GGG + chr5.1:69306766-69306785 MS.gene99379:intron 30.0%
! GTTGTTATTAATGAAGATGC+CGG + chr5.1:69305634-69305653 MS.gene99379:intron 30.0%
! TAACAGGTTCCATAATTTTC+TGG - chr5.1:69306932-69306951 None:intergenic 30.0%
! TGAGTTATACAGTTGATGTT+TGG + chr5.1:69306765-69306784 MS.gene99379:intron 30.0%
! TGCCGTTTATCATGTAATTT+GGG + chr5.1:69309124-69309143 MS.gene99379:intron 30.0%
! TTATAGCAGTTTTCAGTTGA+TGG + chr5.1:69308271-69308290 MS.gene99379:intron 30.0%
! TTATTCTTTTGTAGCTTGGT+GGG + chr5.1:69307593-69307612 MS.gene99379:intron 30.0%
! TTGAAAATATGTCTCTAAGG+TGG + chr5.1:69307773-69307792 MS.gene99379:intron 30.0%
! TTGCCGTTTATCATGTAATT+TGG + chr5.1:69309123-69309142 MS.gene99379:intron 30.0%
! TTTATTCTTTTGTAGCTTGG+TGG + chr5.1:69307592-69307611 MS.gene99379:intron 30.0%
!! TTCATTGGTTTAACATTAGG+TGG - chr5.1:69304172-69304191 None:intergenic 30.0%
!! TTTGAAATTGGTGTTGTTCA+TGG + chr5.1:69304666-69304685 MS.gene99379:intron 30.0%
!!! AATTGGTTTTACGATATGCA+GGG + chr5.1:69308309-69308328 MS.gene99379:intron 30.0%
!!! CATTACTCCAATCCTTTTTT+CGG + chr5.1:69309257-69309276 MS.gene99379:intron 30.0%
!!! GCCCAGTTTTTTATTTTAAC+AGG - chr5.1:69306948-69306967 None:intergenic 30.0%
!!! GTTGCTTTGTTTTATGAAGA+CGG + chr5.1:69304437-69304456 MS.gene99379:CDS 30.0%
!!! TGATTTTTTTCGTAGTTCTG+AGG + chr5.1:69308342-69308361 MS.gene99379:CDS 30.0%
!!! TGGATGTTGGTTTTTGAAAT+TGG + chr5.1:69304654-69304673 MS.gene99379:intron 30.0%
!!! TTTTACTTAGCTTTGCTCTT+TGG + chr5.1:69306099-69306118 MS.gene99379:intron 30.0%
AAGAAGTTCAATGATGTTGG+AGG + chr5.1:69305050-69305069 MS.gene99379:CDS 35.0%
AAGATTTCAATCCCAGGAAT+GGG + chr5.1:69306796-69306815 MS.gene99379:CDS 35.0%
AATTTACTTGTGAAGGTCCA+TGG + chr5.1:69307376-69307395 MS.gene99379:intron 35.0%
ACAGCAAAATTTGTCATCCT+AGG + chr5.1:69308855-69308874 MS.gene99379:CDS 35.0%
ACCTCAATTGGGATATATGT+GGG - chr5.1:69305813-69305832 None:intergenic 35.0%
AGAGTTATCAAGAAGCCATT+AGG + chr5.1:69304864-69304883 MS.gene99379:CDS 35.0%
AGCAACAATCACCATAAACT+TGG - chr5.1:69308674-69308693 None:intergenic 35.0%
AGCTTCAAATCTACCTCAAT+TGG - chr5.1:69305825-69305844 None:intergenic 35.0%
AGGAAGAACTCTGATCTTTA+TGG + chr5.1:69307268-69307287 MS.gene99379:CDS 35.0%
ATCTGCCATGTATTAATGTC+GGG + chr5.1:69305775-69305794 MS.gene99379:CDS 35.0%
ATCTTGTACTCTTGGTTAGA+TGG - chr5.1:69305479-69305498 None:intergenic 35.0%
ATGGAAGAAGAAGAATCTTG+CGG + chr5.1:69307395-69307414 MS.gene99379:CDS 35.0%
ATGTAAATCAGGCCGAAAAA+AGG - chr5.1:69309272-69309291 None:intergenic 35.0%
CAACAAGTAGAAGAAAACGA+TGG - chr5.1:69308424-69308443 None:intergenic 35.0%
CAACAATCACCATAAACTTG+GGG - chr5.1:69308672-69308691 None:intergenic 35.0%
CAGACTCTCTTATGTAAGTT+TGG - chr5.1:69309900-69309919 None:intergenic 35.0%
CCAAAGAAGTTCAATGATGT+TGG + chr5.1:69305047-69305066 MS.gene99379:CDS 35.0%
CCAACATCATTGAACTTCTT+TGG - chr5.1:69305050-69305069 None:intergenic 35.0%
CTCATACAATGTATTTGTGC+AGG + chr5.1:69304415-69304434 MS.gene99379:intron 35.0%
GAATGAATTAAGGGATGACA+AGG - chr5.1:69306466-69306485 None:intergenic 35.0%
GAGGTGGAACTTCAATAATA+AGG + chr5.1:69306818-69306837 MS.gene99379:CDS 35.0%
GAGTTATCAAGAAGCCATTA+GGG + chr5.1:69304865-69304884 MS.gene99379:CDS 35.0%
GATCTGCCATGTATTAATGT+CGG + chr5.1:69305774-69305793 MS.gene99379:CDS 35.0%
GCAAAACATTTGTCAGATAC+TGG - chr5.1:69307467-69307486 None:intergenic 35.0%
GCAACAATCACCATAAACTT+GGG - chr5.1:69308673-69308692 None:intergenic 35.0%
GCCCCTGATATCTAAATATA+GGG + chr5.1:69307883-69307902 MS.gene99379:CDS 35.0%
GCCCTATATTTAGATATCAG+GGG - chr5.1:69307887-69307906 None:intergenic 35.0%
GCCGTTTATCATGTAATTTG+GGG + chr5.1:69309125-69309144 MS.gene99379:intron 35.0%
GCTTCAAATCTACCTCAATT+GGG - chr5.1:69305824-69305843 None:intergenic 35.0%
GTCGTCCTGAAATAATTTCA+AGG - chr5.1:69308044-69308063 None:intergenic 35.0%
GTTCGCATTGTTCCTATAAA+AGG - chr5.1:69304720-69304739 None:intergenic 35.0%
GTTCTGTTGCAGCATATTTA+CGG + chr5.1:69307051-69307070 MS.gene99379:intron 35.0%
TACCTCAATTGGGATATATG+TGG - chr5.1:69305814-69305833 None:intergenic 35.0%
TAGGAACTTTCGACACAATA+GGG - chr5.1:69307657-69307676 None:intergenic 35.0%
TATGTAAGTTTGGCAACTGT+GGG - chr5.1:69309890-69309909 None:intergenic 35.0%
TCAGAGTAAACCTACAATAC+CGG - chr5.1:69305656-69305675 None:intergenic 35.0%
TCTGAAGAATTTGAGGATCA+CGG + chr5.1:69305448-69305467 MS.gene99379:CDS 35.0%
TCTGAGTTCACAAAAGTTGA+TGG + chr5.1:69306368-69306387 MS.gene99379:CDS 35.0%
TCTTCAAAGACATCAAAAGG+TGG - chr5.1:69307136-69307155 None:intergenic 35.0%
TCTTGTACTCTTGGTTAGAT+GGG - chr5.1:69305478-69305497 None:intergenic 35.0%
TGAATGTTGCTAACACAGAT+GGG + chr5.1:69304302-69304321 MS.gene99379:CDS 35.0%
TGAGTTCAACGTTCAAAACT+TGG - chr5.1:69308528-69308547 None:intergenic 35.0%
TGGACAGTTCATGAAATTTG+AGG + chr5.1:69309815-69309834 MS.gene99379:CDS 35.0%
TGGGATAGAAAAATTACAGC+TGG - chr5.1:69305532-69305551 None:intergenic 35.0%
TGTATGACAACAGTTATCAG+CGG + chr5.1:69309647-69309666 MS.gene99379:intron 35.0%
TTATGTAAGTTTGGCAACTG+TGG - chr5.1:69309891-69309910 None:intergenic 35.0%
TTATTCCAGTCAAGACTGAA+AGG - chr5.1:69305304-69305323 None:intergenic 35.0%
TTCAAAACAAGCTGATTACC+AGG - chr5.1:69308751-69308770 None:intergenic 35.0%
TTTATTACCGCAGCAATTGA+AGG - chr5.1:69307733-69307752 None:intergenic 35.0%
TTTCAGTCTTGACTGGAATA+AGG + chr5.1:69305303-69305322 MS.gene99379:CDS 35.0%
TTTGCTGAAGATCAATGCAA+AGG + chr5.1:69307482-69307501 MS.gene99379:CDS 35.0%
! AAAGGACTCTGAAGAATTTG+AGG + chr5.1:69305441-69305460 MS.gene99379:CDS 35.0%
! AACCAAGAGTACAAGATAAC+CGG + chr5.1:69305482-69305501 MS.gene99379:CDS 35.0%
! ATACAGTTGATGTTTGGGAA+TGG + chr5.1:69306771-69306790 MS.gene99379:intron 35.0%
! CATCGTTTTCTTCTACTTGT+TGG + chr5.1:69308422-69308441 MS.gene99379:intron 35.0%
! CATGTTCTTTTGGATGAGAT+TGG + chr5.1:69309487-69309506 MS.gene99379:CDS 35.0%
! CGGACAATATCATCATTTTC+AGG + chr5.1:69308374-69308393 MS.gene99379:CDS 35.0%
! CTGAGTTCACAAAAGTTGAT+GGG + chr5.1:69306369-69306388 MS.gene99379:CDS 35.0%
! CTTTTCTCCAGATGATTTAC+AGG + chr5.1:69309510-69309529 MS.gene99379:CDS 35.0%
! GAAAGTTCCTACTCTCATTT+TGG + chr5.1:69307666-69307685 MS.gene99379:CDS 35.0%
! GGTCGTTGTGAAAGAAATTT+TGG - chr5.1:69305028-69305047 None:intergenic 35.0%
! TTGAAGATGTCACTTCAAAC+AGG + chr5.1:69304621-69304640 MS.gene99379:CDS 35.0%
! TTTTATATGTGTGCTCATGC+TGG + chr5.1:69308887-69308906 MS.gene99379:CDS 35.0%
! TTTTCCTTTCGTACTCACAT+TGG + chr5.1:69307564-69307583 MS.gene99379:intron 35.0%
! TTTTCTCAAGAAGCAGTGAA+TGG + chr5.1:69305981-69306000 MS.gene99379:intron 35.0%
!! AACAAAGGCATCAGAAAATC+TGG - chr5.1:69305332-69305351 None:intergenic 35.0%
!! TAACCTCTTTTTGGTATTGC+AGG + chr5.1:69308821-69308840 MS.gene99379:intron 35.0%
!!! GAATTGGTTTTACGATATGC+AGG + chr5.1:69308308-69308327 MS.gene99379:intron 35.0%
!!! GTCTCTAAGGTGGTATTTTA+CGG + chr5.1:69307783-69307802 MS.gene99379:intron 35.0%
!!! TCGCATTTTGATTGGCAATT+AGG - chr5.1:69305276-69305295 None:intergenic 35.0%
!!! TCTCTAAGGTGGTATTTTAC+GGG + chr5.1:69307784-69307803 MS.gene99379:intron 35.0%
!!! TTTTTTCGGCCTGATTTACA+TGG + chr5.1:69309271-69309290 MS.gene99379:intron 35.0%
AAAACAAGCTGATTACCAGG+TGG - chr5.1:69308748-69308767 None:intergenic 40.0%
AACTTGGAACCCCAAGTTTA+TGG + chr5.1:69308660-69308679 MS.gene99379:CDS 40.0%
AACTTTCGACACAATAGGGA+TGG - chr5.1:69307653-69307672 None:intergenic 40.0%
AAGAAGAATCTTGCGGAAGT+TGG + chr5.1:69307402-69307421 MS.gene99379:CDS 40.0%
AAGTTCAATGATGTTGGAGG+TGG + chr5.1:69305053-69305072 MS.gene99379:CDS 40.0%
AATCAGGCCGAAAAAAGGAT+TGG - chr5.1:69309267-69309286 None:intergenic 40.0%
AATGAAGATGCCGGTATTGT+AGG + chr5.1:69305643-69305662 MS.gene99379:intron 40.0%
ACAAGCTCCTGTAAATCATC+TGG - chr5.1:69309520-69309539 None:intergenic 40.0%
ACCCACATATATCCCAATTG+AGG + chr5.1:69305809-69305828 MS.gene99379:CDS 40.0%
ACGCTAAGTCTAAACTTCCT+GGG + chr5.1:69307212-69307231 MS.gene99379:CDS 40.0%
AGACAAAGTAGAAACTCAGG+TGG - chr5.1:69307238-69307257 None:intergenic 40.0%
AGCAGACAAAGTAGAAACTC+AGG - chr5.1:69307241-69307260 None:intergenic 40.0%
AGCTCCTGTTCTATCTTCAT+TGG - chr5.1:69304187-69304206 None:intergenic 40.0%
ATATACAAGGGATCAGGTCT+TGG - chr5.1:69305405-69305424 None:intergenic 40.0%
ATATGTAGGTTGTTAGCTCG+AGG + chr5.1:69307855-69307874 MS.gene99379:intron 40.0%
ATGCCATCAGTAGCAAGTAT+GGG - chr5.1:69306724-69306743 None:intergenic 40.0%
ATGTTTCTCATGGTTCACCT+GGG + chr5.1:69307695-69307714 MS.gene99379:CDS 40.0%
CATGCAGAAATCATGAGAAG+AGG - chr5.1:69308207-69308226 None:intergenic 40.0%
GAAGATTTCAATCCCAGGAA+TGG + chr5.1:69306795-69306814 MS.gene99379:CDS 40.0%
GAGAAGACTCTGTTCACAAT+CGG + chr5.1:69304560-69304579 MS.gene99379:CDS 40.0%
GCAAGATTCTTCTTCTTCCA+TGG - chr5.1:69307396-69307415 None:intergenic 40.0%
GGAAAAGACCTTGCTTATGA+CGG + chr5.1:69304536-69304555 MS.gene99379:CDS 40.0%
GGCCCCTGATATCTAAATAT+AGG + chr5.1:69307882-69307901 MS.gene99379:CDS 40.0%
GTAGGAACTTTCGACACAAT+AGG - chr5.1:69307658-69307677 None:intergenic 40.0%
GTGAATGTTGCTAACACAGA+TGG + chr5.1:69304301-69304320 MS.gene99379:CDS 40.0%
GTGAGGGATCTGATAAAATG+TGG + chr5.1:69307008-69307027 MS.gene99379:CDS 40.0%
GTGGTGTACTTGGATGTAAT+GGG + chr5.1:69305072-69305091 MS.gene99379:CDS 40.0%
GTGTCTGATAAGGAACATGA+AGG + chr5.1:69307962-69307981 MS.gene99379:CDS 40.0%
GTTCCTGCAATACCAAAAAG+AGG - chr5.1:69308827-69308846 None:intergenic 40.0%
TCATGTTCCTTATCAGACAC+TGG - chr5.1:69307962-69307981 None:intergenic 40.0%
TGACATTCCTTCAATTGCTG+CGG + chr5.1:69307723-69307742 MS.gene99379:CDS 40.0%
TGAGTACGAAAGGAAAACAC+TGG - chr5.1:69307561-69307580 None:intergenic 40.0%
TTGTAAATGACCGAGAGACT+AGG - chr5.1:69305903-69305922 None:intergenic 40.0%
TTTCCACAAGGGAAGATCTT+TGG - chr5.1:69306162-69306181 None:intergenic 40.0%
! ACCAAGAGTACAAGATAACC+GGG + chr5.1:69305483-69305502 MS.gene99379:CDS 40.0%
! ACTATCCTGAAGCAGTGTTT+TGG + chr5.1:69308243-69308262 MS.gene99379:intron 40.0%
! AGGTTTACTCTGAAGAAGAG+AGG + chr5.1:69305663-69305682 MS.gene99379:intron 40.0%
! ATTTTCTCAACTCTGACCAC+AGG - chr5.1:69307184-69307203 None:intergenic 40.0%
! GTTTTCAACGCCTGTAAATC+AGG - chr5.1:69306296-69306315 None:intergenic 40.0%
! TTCAAACAGGTTGAAACGTG+TGG + chr5.1:69304634-69304653 MS.gene99379:intron 40.0%
! TTTCCCATACTTGCTACTGA+TGG + chr5.1:69306718-69306737 MS.gene99379:intron 40.0%
!! AATTACAGCTGGTCTTTGCA+CGG - chr5.1:69305521-69305540 None:intergenic 40.0%
!! AGGATCTCTCGCATTTTGAT+TGG - chr5.1:69305284-69305303 None:intergenic 40.0%
!! AGTGGATTGTCTCTGAACAT+AGG + chr5.1:69305122-69305141 MS.gene99379:CDS 40.0%
!! AGTTCACAAAAGTTGATGGG+AGG + chr5.1:69306372-69306391 MS.gene99379:CDS 40.0%
!! GTTCACAAAAGTTGATGGGA+GGG + chr5.1:69306373-69306392 MS.gene99379:CDS 40.0%
!! TCGCAGTAAGAGCTTTATTG+TGG - chr5.1:69306542-69306561 None:intergenic 40.0%
ACAACCATGATTGTACGTCC+TGG + chr5.1:69305235-69305254 MS.gene99379:CDS 45.0%
ACATTAGGTGGAACAATGGG+AGG - chr5.1:69304160-69304179 None:intergenic 45.0%
ACTCCAAAGATCTTCCCTTG+TGG + chr5.1:69306156-69306175 MS.gene99379:CDS 45.0%
AGATCAGAGTTCTTCCTCTC+AGG - chr5.1:69307265-69307284 None:intergenic 45.0%
AGCGCAGAAAAATTGCTCTG+CGG + chr5.1:69305742-69305761 MS.gene99379:CDS 45.0%
AGCTTCAGAACCACTCAAAG+TGG + chr5.1:69305104-69305123 MS.gene99379:CDS 45.0%
AGGTTGAAACGTGTGGATGT+TGG + chr5.1:69304641-69304660 MS.gene99379:intron 45.0%
ATGGCGAAGATTTCAATCCC+AGG + chr5.1:69306790-69306809 MS.gene99379:CDS 45.0%
ATTTCAATCCCAGGAATGGG+AGG + chr5.1:69306799-69306818 MS.gene99379:CDS 45.0%
CAACCATGATTGTACGTCCT+GGG + chr5.1:69305236-69305255 MS.gene99379:CDS 45.0%
CAACTTTCGAACCCTGAGTT+CGG - chr5.1:69307916-69307935 None:intergenic 45.0%
CACGCTAAGTCTAAACTTCC+TGG + chr5.1:69307211-69307230 MS.gene99379:CDS 45.0%
CAGAGACAATCCACTTTGAG+TGG - chr5.1:69305117-69305136 None:intergenic 45.0%
CAGATACTGGTCATTAACCC+TGG - chr5.1:69307454-69307473 None:intergenic 45.0%
CTACTAAGACTCCAATGGCT+AGG + chr5.1:69304224-69304243 MS.gene99379:CDS 45.0%
CTAGCCATTGGAGTCTTAGT+AGG - chr5.1:69304226-69304245 None:intergenic 45.0%
CTCATCCAAAACACTGCTTC+AGG - chr5.1:69308251-69308270 None:intergenic 45.0%
CTTACCGACAGAAATAGCAG+TGG - chr5.1:69309677-69309696 None:intergenic 45.0%
CTTCCCTTGTGGAAAAGTCT+AGG + chr5.1:69306167-69306186 MS.gene99379:CDS 45.0%
GAAGTTGCTTGTCTTCGCAA+TGG + chr5.1:69305609-69305628 MS.gene99379:intron 45.0%
GAGATCCTTTCAGTCTTGAC+TGG + chr5.1:69305296-69305315 MS.gene99379:CDS 45.0%
GATGCCATCAGTAGCAAGTA+TGG - chr5.1:69306725-69306744 None:intergenic 45.0%
GATGTTTCTCATGGTTCACC+TGG + chr5.1:69307694-69307713 MS.gene99379:CDS 45.0%
GCAATTAGGAAGTCAACCAC+AGG - chr5.1:69305262-69305281 None:intergenic 45.0%
GCGTTGAAAACAAGCGACTA+TGG + chr5.1:69306305-69306324 MS.gene99379:CDS 45.0%
GCTTCCTACTAAGACTCCAA+TGG + chr5.1:69304219-69304238 MS.gene99379:CDS 45.0%
GGCTTCCCGACATTAATACA+TGG - chr5.1:69305783-69305802 None:intergenic 45.0%
GGTGGTGTACTTGGATGTAA+TGG + chr5.1:69305071-69305090 MS.gene99379:CDS 45.0%
GTTCAAGCCAGTGTCTGATA+AGG + chr5.1:69307952-69307971 MS.gene99379:CDS 45.0%
TACTGGTCATTAACCCTGGT+AGG - chr5.1:69307450-69307469 None:intergenic 45.0%
TACTTTGTCTGCTTCCTGAG+AGG + chr5.1:69307248-69307267 MS.gene99379:CDS 45.0%
TATCCTCTTCTTATCAGGGC+TGG - chr5.1:69304744-69304763 None:intergenic 45.0%
TATGTTCTCAGGGTACAAGC+AGG + chr5.1:69309452-69309471 MS.gene99379:intron 45.0%
TCCAATCTGCTATGCACACT+TGG + chr5.1:69309779-69309798 MS.gene99379:CDS 45.0%
TCCATGCCCAAAATGAGAGT+AGG - chr5.1:69307676-69307695 None:intergenic 45.0%
TCCTCAGTATCATCTTCTCC+AGG - chr5.1:69305696-69305715 None:intergenic 45.0%
TCCTCCAATGTGAGTACGAA+AGG - chr5.1:69307571-69307590 None:intergenic 45.0%
TCCTGGAGAAGATGATACTG+AGG + chr5.1:69305692-69305711 MS.gene99379:CDS 45.0%
TCCTTTCGTACTCACATTGG+AGG + chr5.1:69307567-69307586 MS.gene99379:intron 45.0%
TGAACTCAGCCAAATCATCG+AGG + chr5.1:69308540-69308559 MS.gene99379:CDS 45.0%
TGCTTCGAAAATTCCTCTGC+AGG + chr5.1:69304808-69304827 MS.gene99379:CDS 45.0%
TGGTATTGCAGGAACTGTTG+TGG + chr5.1:69308832-69308851 MS.gene99379:intron 45.0%
TTGGGCATGGATGTTTCTCA+TGG + chr5.1:69307685-69307704 MS.gene99379:CDS 45.0%
! CTGCCTAGACTTTTCCACAA+GGG - chr5.1:69306173-69306192 None:intergenic 45.0%
! GCAGAGGAATTTTCGAAGCA+AGG - chr5.1:69304808-69304827 None:intergenic 45.0%
! GGCTTTGGTATAGCGTTGAA+GGG - chr5.1:69306128-69306147 None:intergenic 45.0%
! TACTTGCTACTGATGGCATC+TGG + chr5.1:69306725-69306744 MS.gene99379:intron 45.0%
! TCCTACTCTCATTTTGGGCA+TGG + chr5.1:69307672-69307691 MS.gene99379:CDS 45.0%
! TCGGATCAGCTTGATAGTAG+AGG - chr5.1:69309031-69309050 None:intergenic 45.0%
! TCTGCCTAGACTTTTCCACA+AGG - chr5.1:69306174-69306193 None:intergenic 45.0%
!! AAGATCTTTGGAGTGTGGAC+AGG - chr5.1:69306150-69306169 None:intergenic 45.0%
!! AAGGGAAGATCTTTGGAGTG+TGG - chr5.1:69306155-69306174 None:intergenic 45.0%
!! ACTTTGAGTGGTTCTGAAGC+TGG - chr5.1:69305105-69305124 None:intergenic 45.0%
!! AGATCTTTGGAGTGTGGACA+GGG - chr5.1:69306149-69306168 None:intergenic 45.0%
!! AGCACCACTGCTATTTCTGT+CGG + chr5.1:69309670-69309689 MS.gene99379:CDS 45.0%
!! TAGTTCTGAGGAAAGACGAC+CGG + chr5.1:69308354-69308373 MS.gene99379:CDS 45.0%
!!! AAATATATATTGTTTTTTTT+TGG + chr5.1:69308588-69308607 MS.gene99379:intron 5.0%
!!! AATATATATTGTTTTTTTTT+GGG + chr5.1:69308589-69308608 MS.gene99379:intron 5.0%
!!! ATATTTATATTTTGATTAAA+AGG + chr5.1:69309725-69309744 MS.gene99379:intron 5.0%
AAGTTCCACCTCCCATTCCT+GGG - chr5.1:69306810-69306829 None:intergenic 50.0%
ACACCAGCCCTGATAAGAAG+AGG + chr5.1:69304738-69304757 MS.gene99379:CDS 50.0%
AGGTTGTTAGCTCGAGGCAA+TGG + chr5.1:69307861-69307880 MS.gene99379:intron 50.0%
AGTTTGGCAACTGTGGGATG+AGG - chr5.1:69309884-69309903 None:intergenic 50.0%
CACTTGGCTGCTTCTCAAGT+TGG + chr5.1:69309795-69309814 MS.gene99379:CDS 50.0%
CATTGTCTGGAGATCGAGGT+TGG - chr5.1:69308723-69308742 None:intergenic 50.0%
CCATTGCCGATGCCTTAAAG+GGG + chr5.1:69304831-69304850 MS.gene99379:CDS 50.0%
CTCAGTTGCATGCCCCTTTA+AGG - chr5.1:69304846-69304865 None:intergenic 50.0%
GAAGGAATGTCAGATTGCCC+AGG - chr5.1:69307715-69307734 None:intergenic 50.0%
GAGCGAATGCTACGTAACTG+TGG + chr5.1:69306332-69306351 MS.gene99379:CDS 50.0%
GATGTTGGAGGTGGTGTACT+TGG + chr5.1:69305062-69305081 MS.gene99379:CDS 50.0%
GCCAAGTGTGCATAGCAGAT+TGG - chr5.1:69309783-69309802 None:intergenic 50.0%
GCCATTGCCGATGCCTTAAA+GGG + chr5.1:69304830-69304849 MS.gene99379:CDS 50.0%
GCCCGGTTATCTTGTACTCT+TGG - chr5.1:69305487-69305506 None:intergenic 50.0%
GGGATATATGTGGGTCGCTT+TGG - chr5.1:69305804-69305823 None:intergenic 50.0%
GTTTGGCAACTGTGGGATGA+GGG - chr5.1:69309883-69309902 None:intergenic 50.0%
TCAGTGCATAGCTCCTACCA+GGG + chr5.1:69307434-69307453 MS.gene99379:CDS 50.0%
TCTTCTCGCCGTCATAAGCA+AGG - chr5.1:69304547-69304566 None:intergenic 50.0%
TGATGTGCGAGGACTTGTGA+GGG + chr5.1:69306992-69307011 MS.gene99379:CDS 50.0%
TTACCAGGTGGCACATTGTC+TGG - chr5.1:69308736-69308755 None:intergenic 50.0%
TTAGGTGGAACAATGGGAGG+TGG - chr5.1:69304157-69304176 None:intergenic 50.0%
TTCTCAACTCTGACCACAGG+CGG - chr5.1:69307181-69307200 None:intergenic 50.0%
! ATTGATACCACCTTGGCTCG+AGG - chr5.1:69309856-69309875 None:intergenic 50.0%
! GAGGGTTTTGCAAGCTCCAA+GGG + chr5.1:69306391-69306410 MS.gene99379:CDS 50.0%
! GGGCTTTGGTATAGCGTTGA+AGG - chr5.1:69306129-69306148 None:intergenic 50.0%
!! AAGAAGAGAGGTGCTGTTCC+TGG + chr5.1:69305675-69305694 MS.gene99379:CDS 50.0%
!! TGCATGCCCCTTTAAGGCAT+CGG - chr5.1:69304840-69304859 None:intergenic 50.0%
AAGACCCTCATCCGCTCTTG+TGG - chr5.1:69306199-69306218 None:intergenic 55.0%
AAGACGGACGCCCTGTTGAA+GGG + chr5.1:69304453-69304472 MS.gene99379:CDS 55.0%
AAGACTCCAATGGCTAGGCG+TGG + chr5.1:69304229-69304248 MS.gene99379:CDS 55.0%
AGAAGCCACAAGAGCGGATG+AGG + chr5.1:69306191-69306210 MS.gene99379:CDS 55.0%
AGGCCCAGGACGTACAATCA+TGG - chr5.1:69305242-69305261 None:intergenic 55.0%
AGGGCATGTGTCCGAACTCA+GGG + chr5.1:69307902-69307921 MS.gene99379:CDS 55.0%
AGTAGAAACTCAGGTGGCCC+AGG - chr5.1:69307232-69307251 None:intergenic 55.0%
CAATGGCTAGGCGTGGCTTA+GGG + chr5.1:69304236-69304255 MS.gene99379:CDS 55.0%
CAGCGCCTTTCCCTTCAACA+GGG - chr5.1:69304466-69304485 None:intergenic 55.0%
CTAGGCAGAAGCCACAAGAG+CGG + chr5.1:69306185-69306204 MS.gene99379:CDS 55.0%
CTCAGTGCATAGCTCCTACC+AGG + chr5.1:69307433-69307452 MS.gene99379:CDS 55.0%
GAAGCCACAAGAGCGGATGA+GGG + chr5.1:69306192-69306211 MS.gene99379:CDS 55.0%
GAAGTTCCACCTCCCATTCC+TGG - chr5.1:69306811-69306830 None:intergenic 55.0%
GGCACATTGTCTGGAGATCG+AGG - chr5.1:69308727-69308746 None:intergenic 55.0%
GGCCATTGCCGATGCCTTAA+AGG + chr5.1:69304829-69304848 MS.gene99379:CDS 55.0%
GTGATGTGCGAGGACTTGTG+AGG + chr5.1:69306991-69307010 MS.gene99379:CDS 55.0%
GTGGAACAATGGGAGGTGGT+GGG - chr5.1:69304153-69304172 None:intergenic 55.0%
TAGGGCATGTGTCCGAACTC+AGG + chr5.1:69307901-69307920 MS.gene99379:CDS 55.0%
TCAATCCCAGGAATGGGAGG+TGG + chr5.1:69306802-69306821 MS.gene99379:CDS 55.0%
TCTCCAGACAATGTGCCACC+TGG + chr5.1:69308730-69308749 MS.gene99379:CDS 55.0%
TGGAACAATGGGAGGTGGTG+GGG - chr5.1:69304152-69304171 None:intergenic 55.0%
TTGGAGTGTGGACAGGGCTT+TGG - chr5.1:69306143-69306162 None:intergenic 55.0%
! AGAGCGGATGAGGGTCTTGT+CGG + chr5.1:69306201-69306220 MS.gene99379:CDS 55.0%
! GGAGGGTTTTGCAAGCTCCA+AGG + chr5.1:69306390-69306409 MS.gene99379:CDS 55.0%
! TCTGAAGCTTCCTCGAGCCA+AGG + chr5.1:69309843-69309862 MS.gene99379:CDS 55.0%
!! CCCCTTTAAGGCATCGGCAA+TGG - chr5.1:69304834-69304853 None:intergenic 55.0%
!! CTGTTGAAGGGAAAGGCGCT+GGG + chr5.1:69304465-69304484 MS.gene99379:CDS 55.0%
!! GGGAGGCATTGATACCACCT+TGG - chr5.1:69309863-69309882 None:intergenic 55.0%
AGGAAGTCAACCACAGGCCC+AGG - chr5.1:69305256-69305275 None:intergenic 60.0%
AGGCGTGGCTTAGGGACGAA+GGG + chr5.1:69304244-69304263 MS.gene99379:CDS 60.0%
CCAATGGCTAGGCGTGGCTT+AGG + chr5.1:69304235-69304254 MS.gene99379:CDS 60.0%
CCAGCGCCTTTCCCTTCAAC+AGG - chr5.1:69304467-69304486 None:intergenic 60.0%
CCTAAGCCACGCCTAGCCAT+TGG - chr5.1:69304238-69304257 None:intergenic 60.0%
GAAGACGGACGCCCTGTTGA+AGG + chr5.1:69304452-69304471 MS.gene99379:CDS 60.0%
GAAGCTTCCTCGAGCCAAGG+TGG + chr5.1:69309846-69309865 MS.gene99379:CDS 60.0%
GATTGTACGTCCTGGGCCTG+TGG + chr5.1:69305243-69305262 MS.gene99379:CDS 60.0%
GCACGGAAATTCGCTCAGCC+CGG - chr5.1:69305504-69305523 None:intergenic 60.0%
GGACGCCCTGTTGAAGGGAA+AGG + chr5.1:69304458-69304477 MS.gene99379:CDS 60.0%
GGTGGAACAATGGGAGGTGG+TGG - chr5.1:69304154-69304173 None:intergenic 60.0%
TAGGCGTGGCTTAGGGACGA+AGG + chr5.1:69304243-69304262 MS.gene99379:CDS 60.0%
TCTGCACGCTGTGATGTGCG+AGG + chr5.1:69306981-69307000 MS.gene99379:CDS 60.0%
TGGCAACTGTGGGATGAGGG+AGG - chr5.1:69309880-69309899 None:intergenic 60.0%
! CCTGTTGAAGGGAAAGGCGC+TGG + chr5.1:69304464-69304483 MS.gene99379:CDS 60.0%
! GGAACAATGGGAGGTGGTGG+GGG - chr5.1:69304151-69304170 None:intergenic 60.0%
! GGCGCTGGGAGGAAGATACT+TGG + chr5.1:69304479-69304498 MS.gene99379:CDS 60.0%
!! TTGAAGGGAAAGGCGCTGGG+AGG + chr5.1:69304468-69304487 MS.gene99379:CDS 60.0%
GTTTAGGCGTGCACCGCCTG+TGG + chr5.1:69307165-69307184 MS.gene99379:CDS 65.0%
! GCATCGGCAATGGCCTGCAG+AGG - chr5.1:69304824-69304843 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 69304118 69309941 69304118 ID=MS.gene99379
chr5.1 mRNA 69304118 69309941 69304118 ID=MS.gene99379.t1;Parent=MS.gene99379
chr5.1 exon 69304118 69304342 69304118 ID=MS.gene99379.t1.exon1;Parent=MS.gene99379.t1
chr5.1 CDS 69304118 69304342 69304118 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69304437 69304642 69304437 ID=MS.gene99379.t1.exon2;Parent=MS.gene99379.t1
chr5.1 CDS 69304437 69304642 69304437 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69304727 69304924 69304727 ID=MS.gene99379.t1.exon3;Parent=MS.gene99379.t1
chr5.1 CDS 69304727 69304924 69304727 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69305007 69305143 69305007 ID=MS.gene99379.t1.exon4;Parent=MS.gene99379.t1
chr5.1 CDS 69305007 69305143 69305007 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69305227 69305324 69305227 ID=MS.gene99379.t1.exon5;Parent=MS.gene99379.t1
chr5.1 CDS 69305227 69305324 69305227 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69305437 69305534 69305437 ID=MS.gene99379.t1.exon6;Parent=MS.gene99379.t1
chr5.1 CDS 69305437 69305534 69305437 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69305665 69305830 69305665 ID=MS.gene99379.t1.exon7;Parent=MS.gene99379.t1
chr5.1 CDS 69305665 69305830 69305665 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69306109 69306225 69306109 ID=MS.gene99379.t1.exon8;Parent=MS.gene99379.t1
chr5.1 CDS 69306109 69306225 69306109 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69306305 69306412 69306305 ID=MS.gene99379.t1.exon9;Parent=MS.gene99379.t1
chr5.1 CDS 69306305 69306412 69306305 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69306777 69306839 69306777 ID=MS.gene99379.t1.exon10;Parent=MS.gene99379.t1
chr5.1 CDS 69306777 69306839 69306777 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69306933 69307046 69306933 ID=MS.gene99379.t1.exon11;Parent=MS.gene99379.t1
chr5.1 CDS 69306933 69307046 69306933 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69307124 69307289 69307124 ID=MS.gene99379.t1.exon12;Parent=MS.gene99379.t1
chr5.1 CDS 69307124 69307289 69307124 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69307391 69307503 69307391 ID=MS.gene99379.t1.exon13;Parent=MS.gene99379.t1
chr5.1 CDS 69307391 69307503 69307391 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69307607 69307744 69307607 ID=MS.gene99379.t1.exon14;Parent=MS.gene99379.t1
chr5.1 CDS 69307607 69307744 69307607 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69307863 69308011 69307863 ID=MS.gene99379.t1.exon15;Parent=MS.gene99379.t1
chr5.1 CDS 69307863 69308011 69307863 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69308330 69308395 69308330 ID=MS.gene99379.t1.exon16;Parent=MS.gene99379.t1
chr5.1 CDS 69308330 69308395 69308330 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69308498 69308561 69308498 ID=MS.gene99379.t1.exon17;Parent=MS.gene99379.t1
chr5.1 CDS 69308498 69308561 69308498 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69308640 69308751 69308640 ID=MS.gene99379.t1.exon18;Parent=MS.gene99379.t1
chr5.1 CDS 69308640 69308751 69308640 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69308843 69308916 69308843 ID=MS.gene99379.t1.exon19;Parent=MS.gene99379.t1
chr5.1 CDS 69308843 69308916 69308843 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69309463 69309557 69309463 ID=MS.gene99379.t1.exon20;Parent=MS.gene99379.t1
chr5.1 CDS 69309463 69309557 69309463 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69309660 69309691 69309660 ID=MS.gene99379.t1.exon21;Parent=MS.gene99379.t1
chr5.1 CDS 69309660 69309691 69309660 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
chr5.1 exon 69309775 69309941 69309775 ID=MS.gene99379.t1.exon22;Parent=MS.gene99379.t1
chr5.1 CDS 69309775 69309941 69309775 ID=cds.MS.gene99379.t1;Parent=MS.gene99379.t1
Gene Sequence

>MS.gene99379

ATGAGTTCACAAGGACACAAGGACTATTTGCCCCCACCACCTCCCATTGTTCCACCTAATGTTAAACCAATGAAGATAGAACAGGAGCTTGCAAAGAAGAAGCTTCCTACTAAGACTCCAATGGCTAGGCGTGGCTTAGGGACGAAGGGAACTAAACTGCCTTTGTTAACAAATCACTTTGAAGTGAATGTTGCTAACACAGATGGGTTTTTCTTTCAGTATAGTGTATGTTTTGTATTTCATGATTCAGTTGTTTTCTTGCTAACATTTGTGTATTAATTTTTTGTTAAATGTTGACTCATACAATGTATTTGTGCAGGTTGCTTTGTTTTATGAAGACGGACGCCCTGTTGAAGGGAAAGGCGCTGGGAGGAAGATACTTGGCAATGTTCAAAAAACATATGTTTCTGAGCTTAATGGAAAAGACCTTGCTTATGACGGCGAGAAGACTCTGTTCACAATCGGCTCTCTAGCTCATAAGAAGCTCGAGTTCACTGTTGTTGTTGAAGATGTCACTTCAAACAGGTTGAAACGTGTGGATGTTGGTTTTTGAAATTGGTGTTGTTCATGGTTTTTTATGTTTCTGATATTTAACTTTGCCTTTTATAGGAACAATGCGAACACCAGCCCTGATAAGAAGAGGATAAAAAAATCATACCGTTCGAAGACTTATAAAGTTGAAATCAGCCTTGCTTCGAAAATTCCTCTGCAGGCCATTGCCGATGCCTTAAAGGGGCATGCAACTGAGAGTTATCAAGAAGCCATTAGGGTTCTTGATATTATCTTGAGACAACATGCTGCTAAACAGTACGAACTTTAATAACTACATGTATTTTTTATGTAATATAGAATAACAACAGTAATAATATCTTTGTAATATCTATCACAGGGGCTGTCTGCTAGTGCGCCAAAATTTCTTTCACAACGACCCAAAGAAGTTCAATGATGTTGGAGGTGGTGTACTTGGATGTAATGGGCTGCATTCCAGCTTCAGAACCACTCAAAGTGGATTGTCTCTGAACATAGGTTTGATCTTGATTCCTTTGTTGTCTATATTCTCATCTGAATATTTATTTGTCACATTTCTTTACTTCTTTCAATTTGTTTAGATGTGTCGACAACCATGATTGTACGTCCTGGGCCTGTGGTTGACTTCCTAATTGCCAATCAAAATGCGAGAGATCCTTTCAGTCTTGACTGGAATAAGGTAACCAGATTTTCTGATGCCTTTGTTTTGCTAATTGTTCCTTAACTTTTTGTTATACTCATTGTTCTTCGTTTAAACCAAGACCTGATCCCTTGTATATTTTATTGTGTAGGCTAAAAGGACTCTGAAGAATTTGAGGATCACGGCTAGCCCATCTAACCAAGAGTACAAGATAACCGGGCTGAGCGAATTTCCGTGCAAAGACCAGCTGTAATTTTTCTATCCCATTTTAAGTTGATTGTGTAATCTATTTATGACTTTCTTAATGTCTGGAATTGTTACTTGAAGTTGCTTGTCTTCGCAATGGATGTTGTTATTAATGAAGATGCCGGTATTGTAGGTTTACTCTGAAGAAGAGAGGTGCTGTTCCTGGAGAAGATGATACTGAGGAGATCACTGTTTATGATTATTTTGTCAAGCGCAGAAAAATTGCTCTGCGGTACTCAGCTGATCTGCCATGTATTAATGTCGGGAAGCCAAAGCGACCCACATATATCCCAATTGAGGTAGATTTGAAGCTTTATATTAGTTTAGTACTATCCTCATAATGTGTATTAGCTATTGGATATAATTTACCTAGTCTCTCGGTCATTTACAAAATCTATAAATTGGTCGCAGCTTTAATTTTGTGATGTAGATTAAGTGTTGACGATTCATTTTCTCAAGAAGCAGTGAATGGATTAATAAACTTTCCATTTTCTTTTCTTTCTGAAACTCTAATGATGTGTAGATTTATCTTCCAATACTTGATAACTATTTTCGAACATTTATGTGTTTTACTTAGCTTTGCTCTTTGGTATCCCTTCAACGCTATACCAAAGCCCTGTCCACACTCCAAAGATCTTCCCTTGTGGAAAAGTCTAGGCAGAAGCCACAAGAGCGGATGAGGGTCTTGTCGGATGTAAGTCTCTTTGATATATATTGACTAATGAATTGTCACATGAATGTCACTTCACTGAATATTATTTCCTGATTTACAGGCGTTGAAAACAAGCGACTATGGCTCTGAGCGAATGCTACGTAACTGTGGCATTTCAATAACGTCTGAGTTCACAAAAGTTGATGGGAGGGTTTTGCAAGCTCCAAGGGTATTGTTCTTTTATCATTGTTTTCATGAAAATACTTATTTGTTTTGTTTCCTTGTCATCCCTTAATTCATTCGCTGTTATTGAGTGTCTTCTATTGATTTTTCTTCAAAATATTGCTAGAAAAAGCCACAATAAAGCTCTTACTGCGAAGTTATTTTCAGCAATTGAATAATCACCATTTCTTTGAATGCTTGACATCATTTTTAAAATAATCACCATTACTTTTGGAAGAAATTTTTCTGTTCCTGTTTGATAGTTATATTGTTGTGCATGTTCTTTAGTGAGATGATCTTAATTGCGAAATGTTTCCCATACTTGCTACTGATGGCATCTGGCATGTAATTATCTCTATTGAGTTATACAGTTGATGTTTGGGAATGGCGAAGATTTCAATCCCAGGAATGGGAGGTGGAACTTCAATAATAAGGTATTCATGACAGATCTGAGCAATACTTTTATGTATGTTTTGTTGATGGCTTTCATCAACATTCTTTTTCTAATGATTTAATATTGTTTCCAGAAAATTATGGAACCTGTTAAAATAAAAAACTGGGCTGTGGTGAACTTTTCTGCACGCTGTGATGTGCGAGGACTTGTGAGGGATCTGATAAAATGTGGAAGAATGAAAGGAATTGTAAGTTCTGTTGCAGCATATTTACGGACAAACATAAAAAGGGGCTAACTCTATTCTATTTCGTTTGCTTTTGGCAGATTCTTGAACCACCTTTTGATGTCTTTGAAGAAAATGGTCAGTTTAGGCGTGCACCGCCTGTGGTCAGAGTTGAGAAAATGTTCGAACACGCTAAGTCTAAACTTCCTGGGCCACCTGAGTTTCTACTTTGTCTGCTTCCTGAGAGGAAGAACTCTGATCTTTATGGTTAGTTCCTTGATATATTTCCATGTTCTATTTACCTTTTTTTTAATGCATTTGTTAAATGGCCTTCTTAATAAAAATTAATTGGAAATTTACTTGTGAAGGTCCATGGAAGAAGAAGAATCTTGCGGAAGTTGGAATCGTTACTCAGTGCATAGCTCCTACCAGGGTTAATGACCAGTATCTGACAAATGTTTTGCTGAAGATCAATGCAAAGGTATATTAATTCTTCCTTTGGTTTCTTTTAATATTATTATTTTCTAGTTTGTCACCAGTGTTTTCCTTTCGTACTCACATTGGAGGATTTTATTCTTTTGTAGCTTGGTGGGATGAATTCGCAGTTAAGCGTTGAATACTCTAGATCCATCCCTATTGTGTCGAAAGTTCCTACTCTCATTTTGGGCATGGATGTTTCTCATGGTTCACCTGGGCAATCTGACATTCCTTCAATTGCTGCGGTAATAAAAGTTCTTATTGTGTGTTCTTTTGAAAATATGTCTCTAAGGTGGTATTTTACGGGTACACTGTTATCTAAATGTTTTTTTATTTTTCCCATGTAAATGTCTACATATGTAGGTTGTTAGCTCGAGGCAATGGCCCCTGATATCTAAATATAGGGCATGTGTCCGAACTCAGGGTTCGAAAGTTGAGATGATTGACAATTTGTTCAAGCCAGTGTCTGATAAGGAACATGAAGGAATTATAAAAGATGAAGGAATTATAAGGTATATTTATTTTTGATAACCAAGTTTTTCCTTGAAATTATTTCAGGACGACTAATAGCTCCCTATATTTTATTGCATGTCGATAAGGTCTAATATTCAAAGATCGATTGGAAGCAAGAATCCTAATTTTTTCAACGACTGACTTTTCTGTGTGAAAAAAAGATCAAAGTTTTTATAGTTGTATAGCACACTCCTCTTCTCATGATTTCTGCATGATCATAAGATCATTGAACTATCCTGAAGCAGTGTTTTGGATGAGTTATAGCAGTTTTCAGTTGATGGTTTATTTATTTTGGGAATTGGTTTTACGATATGCAGGGAAATTTTGCTTGATTTTTTTCGTAGTTCTGAGGAAAGACGACCGGACAATATCATCATTTTCAGGTTAACTTACTTTCCCAATTTTCTACCATCGTTTTCTTCTACTTGTTGGTTTATTGCTACTAGTATGTATGCTTATAATTAATATAATTAATGTTATTGTAGGGATGGTGTTAGTGAGTCTCAGTTCAACCAAGTTTTGAACGTTGAACTCAGCCAAATCATCGAGGTTCTTAAATTGATCAAATTTGCATTAAATATATATTGTTTTTTTTTGGGGGTTTAATCTAAATCTTTCAAGTTTTAGGCTTGTAAATTTCTTGATGAAACTTGGAACCCCAAGTTTATGGTGATTGTTGCTCAGAAGAATCATCATACAAAATTCTTCCAACCTCGATCTCCAGACAATGTGCCACCTGGTAATCAGCTTGTTTTGAAGTCTGTCATAGTTCCATTTTTTTATATATAAAATTTGTTTCATATCTAGCTAACCTCTTTTTGGTATTGCAGGAACTGTTGTGGACAGCAAAATTTGTCATCCTAGGAATTATGATTTTTATATGTGTGCTCATGCTGGAATGATTGTGAGTATCTTCTACTCTTTTTCTGTTGATGTTCATTTCAGCTGAGCTTGCTTTTTGAAGATGCATCGCTTCTTTTCTCTGATCAAATGTGTATATATGTTCTTTTAGGTGCCTCTACTATCAAGCTGATCCGAGTTCAATATATGTATTTTCATTGGGAAAAATAGAATTAAAAATACACAAAATCTTGATTACTGGTTTTTTCTTTGCCGTTTATCATGTAATTTGGGGATGGTTGATATATGACACGTTTTTCATTTCTTGTTCATTAGTACGATAGTGTTTCTTTGTGTTAAATTCAATTTATATCGTATGTCTGTGATTTTGTGTTATGTCTGCTCATTACTCCAATCCTTTTTTCGGCCTGATTTACATGGTTATAATTATGATTGTTTTTTTAACACGATATAATTATGATTGTTACCTTGAAGACTTCAAGTTATCTTTGTCAGCCATTCTGATAATAATCTGTAATCCTTTTTGCTTGCATTCTATCATGAAATTCAGTAGCAAACCTTGTACTTATTTATCAAACTATGTTCTCAGGGTACAAGCAGGCCAACACATTATCATGTTCTTTTGGATGAGATTGGCTTTTCTCCAGATGATTTACAGGAGCTTGTGCACTCTCTATCTTATGTGTAAGTTTACATTTGGATTTGATTGCTTTGAAATTATGTTTCTGTAATTCTGATATTCAATTAATATAGTAGCTTATAAAAATATTTGTTGTATGACAACAGTTATCAGCGGAGCACCACTGCTATTTCTGTCGGTAAGTTCTATCGAGAATTATATTTATTTGTGCATATTTATATTTTGATTAAAAGGTGCTAATTAGTAAAATCTTATATGCAGTTGCTCCAATCTGCTATGCACACTTGGCTGCTTCTCAAGTTGGACAGTTCATGAAATTTGAGGATAAGTCTGAAGCTTCCTCGAGCCAAGGTGGTATCAATGCCTCCCTCATCCCACAGTTGCCAAACTTACATAAGAGAGTCTGCAATTCCATGTTTTTTGTCTGA
Protein sequence

>MS.gene99379.t1

MSSQGHKDYLPPPPPIVPPNVKPMKIEQELAKKKLPTKTPMARRGLGTKGTKLPLLTNHFEVNVANTDGFFFQYSVALFYEDGRPVEGKGAGRKILGNVQKTYVSELNGKDLAYDGEKTLFTIGSLAHKKLEFTVVVEDVTSNRNNANTSPDKKRIKKSYRSKTYKVEISLASKIPLQAIADALKGHATESYQEAIRVLDIILRQHAAKQGCLLVRQNFFHNDPKKFNDVGGGVLGCNGLHSSFRTTQSGLSLNIDVSTTMIVRPGPVVDFLIANQNARDPFSLDWNKAKRTLKNLRITASPSNQEYKITGLSEFPCKDQLFTLKKRGAVPGEDDTEEITVYDYFVKRRKIALRYSADLPCINVGKPKRPTYIPIELCSLVSLQRYTKALSTLQRSSLVEKSRQKPQERMRVLSDALKTSDYGSERMLRNCGISITSEFTKVDGRVLQAPRLMFGNGEDFNPRNGRWNFNNKKIMEPVKIKNWAVVNFSARCDVRGLVRDLIKCGRMKGIILEPPFDVFEENGQFRRAPPVVRVEKMFEHAKSKLPGPPEFLLCLLPERKNSDLYGPWKKKNLAEVGIVTQCIAPTRVNDQYLTNVLLKINAKLGGMNSQLSVEYSRSIPIVSKVPTLILGMDVSHGSPGQSDIPSIAAVVSSRQWPLISKYRACVRTQGSKVEMIDNLFKPVSDKEHEGIIKDEGIIREILLDFFRSSEERRPDNIIIFRDGVSESQFNQVLNVELSQIIEACKFLDETWNPKFMVIVAQKNHHTKFFQPRSPDNVPPGTVVDSKICHPRNYDFYMCAHAGMIGTSRPTHYHVLLDEIGFSPDDLQELVHSLSYVYQRSTTAISVVAPICYAHLAASQVGQFMKFEDKSEASSSQGGINASLIPQLPNLHKRVCNSMFFV