AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene76957

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76957.t1 MTR_7g007850 98.594 569 6 1 1 569 1 567 0.0 1120
MS.gene76957.t1 MTR_7g007850 93.656 599 6 2 1 569 1 597 0.0 1104
MS.gene76957.t1 MTR_7g007850 98.577 492 5 1 1 492 1 490 0.0 955
MS.gene76957.t1 MTR_7g007850 98.574 491 5 1 1 491 1 489 0.0 954
MS.gene76957.t1 MTR_6g027660 31.767 617 341 13 1 550 1 604 3.41e-89 288
MS.gene76957.t1 MTR_6g027680 33.102 577 303 14 10 520 12 571 1.50e-87 282
MS.gene76957.t1 MTR_6g027630 35.797 433 264 5 19 444 13 438 7.44e-83 270
MS.gene76957.t1 MTR_6g027630 35.797 433 264 5 19 444 13 438 2.80e-82 270
MS.gene76957.t1 MTR_6g027650 35.321 436 261 6 16 444 10 431 9.76e-80 263
MS.gene76957.t1 MTR_7g086510 38.191 398 234 4 51 441 38 430 3.57e-79 262
MS.gene76957.t1 MTR_7g086610 36.930 417 242 6 31 438 17 421 5.43e-78 258
MS.gene76957.t1 MTR_2g035430 30.245 572 368 13 8 562 26 583 1.43e-73 246
MS.gene76957.t1 MTR_1g030660 31.238 541 339 9 44 566 60 585 3.73e-73 245
MS.gene76957.t1 MTR_8g089360 31.560 545 344 12 31 565 42 567 6.50e-71 238
MS.gene76957.t1 MTR_8g089360 31.793 541 340 12 31 561 59 580 7.69e-71 239
MS.gene76957.t1 MTR_8g089320 30.370 540 349 13 8 535 26 550 6.55e-70 236
MS.gene76957.t1 MTR_1g111740 31.100 582 342 11 6 555 2 556 6.83e-70 236
MS.gene76957.t1 MTR_8g461380 30.728 563 350 12 8 549 33 576 4.17e-65 223
MS.gene76957.t1 MTR_6g027630 34.270 356 223 3 95 444 3 353 4.36e-63 216
MS.gene76957.t1 MTR_4g099270 32.775 537 328 16 37 556 6 526 5.90e-57 200
MS.gene76957.t1 MTR_4g099270 37.297 370 214 10 33 391 20 382 9.39e-52 182
MS.gene76957.t1 MTR_8g089340 27.778 450 297 8 130 566 3 437 2.46e-41 155
MS.gene76957.t1 MTR_4g099270 31.235 429 266 13 142 556 1 414 4.21e-38 146
MS.gene76957.t1 MTR_4g099270 38.014 292 163 10 33 313 20 304 4.76e-36 137
MS.gene76957.t1 MTR_6g027670 28.956 297 157 4 278 520 6 302 7.92e-33 128
MS.gene76957.t1 MTR_7g007840 79.661 59 12 0 29 87 25 83 2.37e-23 94.7
MS.gene76957.t1 MTR_6g034535 28.700 223 154 4 345 566 89 307 3.72e-14 73.9
MS.gene76957.t1 MTR_8g089342 43.056 72 40 1 44 114 66 137 5.34e-12 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene76957.t1 AT1G05940 70.450 555 155 5 17 565 13 564 0.0 755
MS.gene76957.t1 AT1G05940 71.124 516 143 4 17 526 13 528 0.0 701
MS.gene76957.t1 AT1G05940 71.518 481 132 3 17 492 13 493 0.0 656
MS.gene76957.t1 AT1G05940 69.933 449 127 4 122 565 1 446 0.0 610
MS.gene76957.t1 AT3G03720 32.253 586 328 11 26 550 1 578 2.71e-95 303
MS.gene76957.t1 AT5G36940 32.215 596 320 12 26 551 4 585 7.06e-85 276
MS.gene76957.t1 AT4G21120 29.895 572 378 8 8 569 24 582 5.33e-80 263
MS.gene76957.t1 AT1G58030 35.646 418 243 8 25 430 18 421 7.54e-79 261
MS.gene76957.t1 AT2G34960 31.239 573 357 10 4 559 14 566 7.10e-77 254
MS.gene76957.t1 AT5G04770 32.967 546 330 13 32 555 33 564 7.73e-74 246
MS.gene76957.t1 AT1G17120 30.978 552 356 10 10 549 40 578 9.14e-70 236
MS.gene76957.t1 AT3G10600 31.849 584 356 13 4 562 6 572 6.85e-68 230
MS.gene76957.t1 AT5G04770 36.074 377 215 9 32 390 33 401 2.56e-61 208
MS.gene76957.t1 AT4G21120 28.539 438 305 3 133 569 2 432 2.00e-56 196
MS.gene76957.t1 AT3G10600 30.046 436 280 8 142 562 1 426 1.73e-50 180
MS.gene76957.t1 AT5G04770 31.163 430 267 10 142 555 1 417 1.04e-48 175

Find 135 sgRNAs with CRISPR-Local

Find 279 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATTGCTGTTGCTGTTTC+TGG -0.028109 7.2:-90099766 MS.gene76957:CDS
TTCTTTAACATGTTCTTATT+TGG 0.134061 7.2:-90098895 MS.gene76957:CDS
CCCCTCTTCATTCTCAGATT+TGG 0.162253 7.2:-90100798 MS.gene76957:CDS
CCCTCTTCATTCTCAGATTT+GGG 0.191090 7.2:-90100797 MS.gene76957:CDS
GTCTTTGACCTTATACTTCT+TGG 0.209325 7.2:-90103573 MS.gene76957:CDS
AGACCATGTCCAATCCATTT+TGG 0.221103 7.2:+90101971 None:intergenic
TGAAGAGGGGTGTGGCGTTT+GGG 0.255331 7.2:+90100811 None:intergenic
GATTTGCCAATAGGCATAAT+TGG 0.263921 7.2:-90101187 MS.gene76957:CDS
TGTGATTCTAAGCATTCTTA+TGG 0.270863 7.2:-90098745 MS.gene76957:CDS
AAGACAGCTCGCGATAATTC+TGG 0.280455 7.2:-90103621 MS.gene76957:CDS
TAATGCTTGACTATCATATT+GGG 0.287047 7.2:-90102072 MS.gene76957:CDS
GTTATTGTTGTCATCTTTGC+TGG 0.287928 7.2:-90101713 MS.gene76957:CDS
TTAATGCTTGACTATCATAT+TGG 0.288983 7.2:-90102073 MS.gene76957:CDS
ATGAAGAGGGGTGTGGCGTT+TGG 0.293761 7.2:+90100810 None:intergenic
ATTAGCATTGGTGCTATTGC+TGG 0.302863 7.2:-90101025 MS.gene76957:CDS
CTTAGATTCTTCAGCAGAAT+TGG 0.303211 7.2:+90101577 None:intergenic
GGAATGTTATCTTTGAAAAC+AGG 0.303937 7.2:+90101992 None:intergenic
GGAGTATGCTTGGTGATTAC+TGG 0.320177 7.2:-90101133 MS.gene76957:CDS
GGTATAAGACCCGTCTTTAC+AGG 0.324045 7.2:-90101644 MS.gene76957:CDS
GCCGGTATCTTCGTTGTTAC+CGG 0.332457 7.2:-90103531 MS.gene76957:CDS
ATGCAAACATTTGGTACAAT+AGG 0.339118 7.2:+90098919 None:intergenic
GTTGGTGTTTATGCGATATA+TGG 0.341931 7.2:-90098723 MS.gene76957:CDS
TGGCTGTGTTGCCAGCATTA+TGG 0.349017 7.2:-90100773 MS.gene76957:CDS
TCAAAGATAACATTCCAAAA+TGG 0.351156 7.2:-90101985 MS.gene76957:CDS
TTTCAGAGGGATTTGCCAAT+AGG 0.372116 7.2:-90101196 MS.gene76957:intron
TGTGTTGCCAGCATTATGGC+TGG 0.373393 7.2:-90100769 MS.gene76957:CDS
TCTCGATTTCCTGCTGTTGT+TGG 0.376719 7.2:-90102160 MS.gene76957:CDS
CGATTTCCTGCTGTTGTTGG+AGG 0.386552 7.2:-90102157 MS.gene76957:CDS
AGGCTTCCAATTATGCCTAT+TGG 0.388084 7.2:+90101181 None:intergenic
CCTTGTTGGTCTCTATGTTC+AGG 0.391513 7.2:-90100987 MS.gene76957:intron
CAGTGGGGTCGGCATGATAC+TGG 0.392087 7.2:+90098700 None:intergenic
CTTCATTCTCAGATTTGGGT+TGG 0.398047 7.2:-90100793 MS.gene76957:CDS
AAGACGGGTCTTATACCATT+TGG 0.403482 7.2:+90101650 None:intergenic
ATGGTTCCATACAGTCTTCT+AGG 0.408151 7.2:-90101109 MS.gene76957:CDS
TCTAGGAGAAGAAGCTCCTT+TGG 0.410647 7.2:-90101092 MS.gene76957:CDS
GTAGTCTTCTTTGCGTATGT+TGG 0.421190 7.2:-90101614 MS.gene76957:CDS
GGCTATATCTTGGACTTGGC+AGG 0.423128 7.2:-90100870 MS.gene76957:CDS
ACTCATTGAGGTGGTTCCTC+TGG 0.431209 7.2:+90098648 None:intergenic
CTCCGATTCCAAGAAGTATA+AGG 0.433685 7.2:+90103565 None:intergenic
TTGAGGTTGATGTTTCCAAC+TGG 0.433700 7.2:-90101685 MS.gene76957:CDS
AATCGGAGCTAAGGCATTGA+TGG 0.434753 7.2:+90101928 None:intergenic
GTGAGAAGTATTAGTAGAAT+CGG 0.435463 7.2:+90101911 None:intergenic
TGATGGAGAGATGACGCGTT+TGG 0.435931 7.2:+90103647 None:intergenic
GAGCAGTCTCGGCTATATCT+TGG 0.442697 7.2:-90100880 MS.gene76957:intron
CTCACTATAATTCTCTGTCT+TGG 0.443992 7.2:-90101893 MS.gene76957:CDS
GTTTCTATTCTGATTAGCAT+TGG 0.444221 7.2:-90101037 MS.gene76957:CDS
TGGTCTCCGTTTGTTCCAAA+TGG 0.449673 7.2:-90101665 MS.gene76957:CDS
GACCTTATACTTCTTGGAAT+CGG 0.452507 7.2:-90103567 MS.gene76957:CDS
TTAAAGAAGATGCAAACATT+TGG 0.456562 7.2:+90098910 None:intergenic
ATTCTAAGCATTCTTATGGT+TGG 0.459746 7.2:-90098741 MS.gene76957:CDS
GAAGAGGGGTGTGGCGTTTG+GGG 0.463035 7.2:+90100812 None:intergenic
GCTGTTTCTGGATTTGCTGC+GGG 0.465037 7.2:-90099754 MS.gene76957:CDS
AGCGTATCTATATACATATA+CGG 0.465929 7.2:-90102134 MS.gene76957:CDS
TGAACTTTAGCAAATATTGC+GGG 0.468776 7.2:+90100835 None:intergenic
GATGAAGAAAATGATGAAGA+AGG 0.469568 7.2:+90103720 None:intergenic
TATCTTGGACTTGGCAGGGA+TGG 0.469596 7.2:-90100865 MS.gene76957:CDS
TTGTTCACGTTTCTTGTCAT+CGG 0.470010 7.2:-90103679 MS.gene76957:CDS
CTATCACACATTCTTTCTGT+TGG 0.475825 7.2:-90100727 MS.gene76957:CDS
CTTATACCATTTGGAACAAA+CGG 0.475959 7.2:+90101659 None:intergenic
CGTGGTCTTTCCCGTCGGCT+TGG 0.477583 7.2:-90103597 MS.gene76957:CDS
CTTACAACAGCACTCCTTGT+TGG 0.477977 7.2:-90101001 MS.gene76957:CDS
AACGAAGATACCGGCACCGA+TGG 0.483739 7.2:+90103539 None:intergenic
GATAACATTCCAAAATGGAT+TGG 0.488211 7.2:-90101980 MS.gene76957:CDS
TACAGTTACATCATGAAGCA+TGG 0.488314 7.2:-90098776 MS.gene76957:intron
CATGTGTTGTTGTACTTCGC+TGG 0.488780 7.2:-90099846 MS.gene76957:CDS
GTGTTGCCAGCATTATGGCT+GGG 0.490837 7.2:-90100768 MS.gene76957:CDS
TCTTGCTCTTCATTTCCGCC+AGG 0.496565 7.2:-90099662 MS.gene76957:intron
AACAATAGTCTCATCTGCAG+TGG 0.496665 7.2:+90098683 None:intergenic
TCTTCTCCTAGAAGACTGTA+TGG 0.498213 7.2:+90101103 None:intergenic
GATTTAAAAGCTTCAGCCAA+AGG 0.508670 7.2:+90101076 None:intergenic
GTTTATGCAGCGGATTCAGT+AGG 0.512220 7.2:-90098961 MS.gene76957:CDS
ACAATAGTCTCATCTGCAGT+GGG 0.513763 7.2:+90098684 None:intergenic
GAGAGATGACGCGTTTGGAT+CGG 0.514161 7.2:+90103652 None:intergenic
CATTCTTTCTGTTGGTACGC+TGG 0.514365 7.2:-90100719 MS.gene76957:intron
TAACATGTTCTTATTTGGCC+AGG 0.516841 7.2:-90098890 MS.gene76957:intron
TACGCTCCTCCAACAACAGC+AGG 0.517835 7.2:+90102151 None:intergenic
TCGCGAGCTGTCTTCTCTGA+TGG 0.520362 7.2:+90103630 None:intergenic
CTTGGAATCGGAGCTTCCAT+CGG 0.527576 7.2:-90103555 MS.gene76957:CDS
AGGCATAATTGGAAGCCTCT+TGG 0.530309 7.2:-90101176 MS.gene76957:CDS
ATCGGAGCTTCCATCGGTGC+CGG 0.531766 7.2:-90103549 MS.gene76957:CDS
TCTCGGCTATATCTTGGACT+TGG 0.534605 7.2:-90100874 MS.gene76957:CDS
TTTGGTACAATAGGAACTCC+AGG 0.535491 7.2:+90098928 None:intergenic
ACAGTTACATCATGAAGCAT+GGG 0.536493 7.2:-90098775 MS.gene76957:intron
TACAGTAGCTCCTGTAAAGA+CGG 0.545158 7.2:+90101634 None:intergenic
TTTGAATTGATAACTCATTG+AGG 0.545273 7.2:+90098636 None:intergenic
CTTGCTATAGTTGTTGCAGT+CGG 0.547457 7.2:-90099691 MS.gene76957:CDS
AACGTCATGAGCAACGGTGC+CGG 0.551795 7.2:+90103512 None:intergenic
TGTTGTTGTACTTCGCTGGA+AGG 0.552915 7.2:-90099842 MS.gene76957:CDS
TATTAGTAGAATCGGAGCTA+AGG 0.553069 7.2:+90101919 None:intergenic
ATTGTACATTGGAGTATGCT+TGG 0.554345 7.2:-90101143 MS.gene76957:CDS
AAGCAGCCCAGCCATAATGC+TGG 0.555365 7.2:+90100762 None:intergenic
TGCTGTTTCTGGATTTGCTG+CGG 0.556606 7.2:-90099755 MS.gene76957:CDS
TTTATGCAGCGGATTCAGTA+GGG 0.557373 7.2:-90098960 MS.gene76957:CDS
CCCAAATCTGAGAATGAAGA+GGG 0.557797 7.2:+90100797 None:intergenic
AGTCTCATCTGCAGTGGGGT+CGG 0.562468 7.2:+90098689 None:intergenic
AGATAATTGATGTTTCATAA+CGG 0.563069 7.2:+90099722 None:intergenic
TCTTGGTGTTAGAGAATCAT+CGG 0.563890 7.2:-90101876 MS.gene76957:CDS
GCCGGTAACAACGAAGATAC+CGG 0.564677 7.2:+90103530 None:intergenic
GTCAAAGACACCAAGCCGAC+GGG 0.574354 7.2:+90103587 None:intergenic
GTATGTATTGCATTGTACAT+TGG 0.579606 7.2:-90101154 MS.gene76957:CDS
ATGCTTGGTGATTACTGGAA+TGG 0.581981 7.2:-90101128 MS.gene76957:CDS
GTTGCTCATGACGTTGGACC+TGG 0.582954 7.2:-90103504 MS.gene76957:intron
AGTATCTTCAGCTAAGCGGC+GGG 0.590169 7.2:-90099803 MS.gene76957:CDS
GTGAACTTTAGCAAATATTG+CGG 0.592167 7.2:+90100834 None:intergenic
TGAAGAATCTAAGAAGCCAC+AGG 0.593382 7.2:-90101567 MS.gene76957:intron
GCTATATCTTGGACTTGGCA+GGG 0.593905 7.2:-90100869 MS.gene76957:CDS
TTCGTTCATGACAGTGACCA+AGG 0.597319 7.2:-90101846 MS.gene76957:intron
TCTTCAGCTAAGCGGCGGGA+AGG 0.597566 7.2:-90099799 MS.gene76957:CDS
TGGAACAAACGGAGACCAGT+TGG 0.600173 7.2:+90101670 None:intergenic
TCTGAGAATGAAGAGGGGTG+TGG 0.600264 7.2:+90100803 None:intergenic
CTGGACGTGGTCTTTCCCGT+CGG 0.602680 7.2:-90103602 MS.gene76957:CDS
GGTCAAAGACACCAAGCCGA+CGG 0.603693 7.2:+90103586 None:intergenic
ACAGTAGCTCCTGTAAAGAC+GGG 0.606123 7.2:+90101635 None:intergenic
GAATTGATAACTCATTGAGG+TGG 0.607223 7.2:+90098639 None:intergenic
GGCACCGTTGCTCATGACGT+TGG 0.607562 7.2:-90103510 MS.gene76957:CDS
TGCTATCTAGGTTTATGCAG+CGG 0.609051 7.2:-90098971 MS.gene76957:intron
AGAATTGCTACGAATTCCCA+TGG 0.612552 7.2:+90103743 None:intergenic
AATGCTTGACTATCATATTG+GGG 0.616231 7.2:-90102071 MS.gene76957:CDS
TGTTTATCATGAAGCTCCAG+AGG 0.619676 7.2:-90098664 MS.gene76957:CDS
GCTCGCGATAATTCTGGACG+TGG 0.625163 7.2:-90103615 MS.gene76957:CDS
GAATGTTATCTTTGAAAACA+GGG 0.627722 7.2:+90101993 None:intergenic
ACCCAAATCTGAGAATGAAG+AGG 0.633728 7.2:+90100796 None:intergenic
AAGTATCTTCAGCTAAGCGG+CGG 0.636037 7.2:-90099804 MS.gene76957:CDS
AGGTCCAACGTCATGAGCAA+CGG 0.636276 7.2:+90103506 None:intergenic
ATTCCAAAATGGATTGGACA+TGG 0.639496 7.2:-90101974 MS.gene76957:CDS
CAGAAACAGCAACAGCAATG+AGG 0.643820 7.2:+90099767 None:intergenic
GTTGTTGTACTTCGCTGGAA+GGG 0.646755 7.2:-90099841 MS.gene76957:CDS
ACAGAGTGCATTTATAACAC+AGG 0.665366 7.2:+90102198 None:intergenic
ATTGGACATGGTCTAGACAT+CGG 0.667606 7.2:-90101962 MS.gene76957:CDS
TTGGTACAATAGGAACTCCA+GGG 0.688639 7.2:+90098929 None:intergenic
ACAATGCAATACATACCAAG+AGG 0.689157 7.2:+90101161 None:intergenic
TCGAAGTATCTTCAGCTAAG+CGG 0.713382 7.2:-90099807 MS.gene76957:CDS
CCTGAACATAGAGACCAACA+AGG 0.716194 7.2:+90100987 None:intergenic
CCAAATCTGAGAATGAAGAG+GGG 0.734973 7.2:+90100798 None:intergenic
CAATAGTCTCATCTGCAGTG+GGG 0.738918 7.2:+90098685 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATCAAATCAAAATATTT+AGG + chr7.2:90103168-90103187 None:intergenic 10.0%
!! TATCATTTATCTATTTATTA+TGG - chr7.2:90099923-90099942 MS.gene76957:intron 10.0%
!!! TAAAATATATGGTATTATTT+TGG + chr7.2:90103560-90103579 None:intergenic 10.0%
!!! TATTTTGATTTGATTTAATA+TGG - chr7.2:90103171-90103190 MS.gene76957:intron 10.0%
!!! AAAATATAAGTATTTCTAAC+CGG + chr7.2:90102058-90102077 None:intergenic 15.0%
!!! ATAAGTTGTTTTTGTTTATT+TGG - chr7.2:90099193-90099212 MS.gene76957:intron 15.0%
!!! ATAATACCATATATTTTACA+AGG - chr7.2:90103562-90103581 MS.gene76957:CDS 15.0%
!!! ATATTTTTTGACATGATTAT+AGG - chr7.2:90102071-90102090 MS.gene76957:CDS 15.0%
!!! TATTTTTTGACATGATTATA+GGG - chr7.2:90102072-90102091 MS.gene76957:CDS 15.0%
!! AATAAGCTGAAAATAGTTTA+TGG - chr7.2:90099425-90099444 MS.gene76957:intron 20.0%
!! AATATCATAAAATTGTCTGT+TGG - chr7.2:90102935-90102954 MS.gene76957:intron 20.0%
!! AGAAGTAAATAGTAGATATT+CGG - chr7.2:90101031-90101050 MS.gene76957:CDS 20.0%
!! AGATAATTGATGTTTCATAA+CGG + chr7.2:90102672-90102691 None:intergenic 20.0%
!! ATTAGAAATATCATTGTGTT+TGG - chr7.2:90102228-90102247 MS.gene76957:CDS 20.0%
!! ATTATAGGGAAAAAATACTT+TGG - chr7.2:90102086-90102105 MS.gene76957:CDS 20.0%
!! ATTCAATCTTGTCATTATAA+AGG - chr7.2:90102906-90102925 MS.gene76957:intron 20.0%
!! CTGAAATAAGTAAAAATATC+AGG + chr7.2:90102503-90102522 None:intergenic 20.0%
!! CTTTAACCTTGTAAAATATA+TGG + chr7.2:90103571-90103590 None:intergenic 20.0%
!! TACAAATATCTCTCTATTTA+AGG + chr7.2:90099543-90099562 None:intergenic 20.0%
!! TCAAACAAAATAAATGTATC+TGG + chr7.2:90099020-90099039 None:intergenic 20.0%
!! TCTTATGTAATAAAAAACGA+AGG - chr7.2:90103141-90103160 MS.gene76957:intron 20.0%
!! TTAGAAAATTCATAAAGCAT+TGG + chr7.2:90100870-90100889 None:intergenic 20.0%
!! TTATAGGGAAAAAATACTTT+GGG - chr7.2:90102087-90102106 MS.gene76957:CDS 20.0%
!! TTATGGTATCTTAGTTATAT+TGG - chr7.2:90099940-90099959 MS.gene76957:intron 20.0%
!! TTCTTTAACATGTTCTTATT+TGG - chr7.2:90103496-90103515 MS.gene76957:intron 20.0%
!!! ACATTAAGTTTTATATTTGC+TGG - chr7.2:90100165-90100184 MS.gene76957:intron 20.0%
!!! AGTCAAAACTTCTTTTAAAT+AGG - chr7.2:90101989-90102008 MS.gene76957:CDS 20.0%
!!! ATATTGAATTTTCTTCAGTA+AGG - chr7.2:90099668-90099687 MS.gene76957:CDS 20.0%
!!! CTATTTTCACAAATTATTAC+TGG + chr7.2:90099793-90099812 None:intergenic 20.0%
!!! CTTATCAATTTTGAAGTATT+TGG + chr7.2:90101785-90101804 None:intergenic 20.0%
!!! TATATAAGCTATAGCTATTT+TGG - chr7.2:90099129-90099148 MS.gene76957:intron 20.0%
!!! TATTGAATTTTCTTCAGTAA+GGG - chr7.2:90099669-90099688 MS.gene76957:CDS 20.0%
!!! TATTTTTACTTATTTCAGAC+TGG - chr7.2:90102505-90102524 MS.gene76957:intron 20.0%
!!! TCTTTTCTTATATTTAAGAC+TGG + chr7.2:90098945-90098964 None:intergenic 20.0%
!!! TTTTTATCATTTTGCTATCT+AGG - chr7.2:90103408-90103427 MS.gene76957:intron 20.0%
! AAAATTTCAAAACGAAGAGA+TGG + chr7.2:90103535-90103554 None:intergenic 25.0%
! AATCTTGTCATTATAAAGGA+GGG - chr7.2:90102910-90102929 MS.gene76957:intron 25.0%
! AGCGTATCTATATACATATA+CGG - chr7.2:90100257-90100276 MS.gene76957:intron 25.0%
! ATAAGTAAAAATATCAGGTG+TGG + chr7.2:90102498-90102517 None:intergenic 25.0%
! ATAGGACATCAATTATTTAC+AGG + chr7.2:90102844-90102863 None:intergenic 25.0%
! ATCAACATCGAAATTCAAAA+TGG + chr7.2:90103366-90103385 None:intergenic 25.0%
! CCAGATACATTAATTATGTT+CGG + chr7.2:90098984-90099003 None:intergenic 25.0%
! GCTTATGCCTTATATAAAAA+CGG + chr7.2:90099372-90099391 None:intergenic 25.0%
! GCTTGGATAAACAAAATTAA+TGG - chr7.2:90099268-90099287 MS.gene76957:intron 25.0%
! GTAGATAAGCTCAATTATTA+AGG - chr7.2:90099241-90099260 MS.gene76957:intron 25.0%
! GTTAAATACTTTAGGTAAGA+TGG + chr7.2:90100578-90100597 None:intergenic 25.0%
! TAAAAAAAATAACACTGACC+TGG + chr7.2:90102750-90102769 None:intergenic 25.0%
! TAAACATGGTTAGATTCTAT+TGG + chr7.2:90102373-90102392 None:intergenic 25.0%
! TAAGTAAAAATATCAGGTGT+GGG + chr7.2:90102497-90102516 None:intergenic 25.0%
! TAATGCTTGACTATCATATT+GGG - chr7.2:90100319-90100338 MS.gene76957:intron 25.0%
! TATCTTATACAAGCTCAAAA+TGG - chr7.2:90099576-90099595 MS.gene76957:intron 25.0%
! TCAAAGATAACATTCCAAAA+TGG - chr7.2:90100406-90100425 MS.gene76957:intron 25.0%
! TCAAATAAGCTAATCCAAAT+AGG - chr7.2:90099517-90099536 MS.gene76957:intron 25.0%
! TGCTCAATGTTAAATACTTT+AGG + chr7.2:90100586-90100605 None:intergenic 25.0%
! TGTGTGTATTTGTTTGTATT+CGG - chr7.2:90102252-90102271 MS.gene76957:intron 25.0%
! TTAAAGAAGATGCAAACATT+TGG + chr7.2:90103484-90103503 None:intergenic 25.0%
! TTAATGCTTGACTATCATAT+TGG - chr7.2:90100318-90100337 MS.gene76957:intron 25.0%
!! AAAGTATCAACAATAGACTT+TGG + chr7.2:90100996-90101015 None:intergenic 25.0%
!! ATGTGGTATTATTTGCTAAA+TGG + chr7.2:90102409-90102428 None:intergenic 25.0%
!! CAACATGATTTTTGTTCAAT+TGG + chr7.2:90103034-90103053 None:intergenic 25.0%
!! GAATGTTATCTTTGAAAACA+GGG + chr7.2:90100401-90100420 None:intergenic 25.0%
!!! AAAGGTAAAGCTTTTTAGTA+TGG + chr7.2:90101925-90101944 None:intergenic 25.0%
!!! AGTTAGACCGTTTTTATATA+AGG - chr7.2:90099362-90099381 MS.gene76957:intron 25.0%
!!! CTTATTTTTGACATTTCAGA+GGG - chr7.2:90101182-90101201 MS.gene76957:CDS 25.0%
!!! TAATTTTGTTTATCCAAGCA+AGG + chr7.2:90099267-90099286 None:intergenic 25.0%
!!! TCTTATTTTTGACATTTCAG+AGG - chr7.2:90101181-90101200 MS.gene76957:CDS 25.0%
AAATTGTGATCATTACCTGT+TGG - chr7.2:90102183-90102202 MS.gene76957:CDS 30.0%
AACTTAACTAAAGACGTGTT+TGG + chr7.2:90099873-90099892 None:intergenic 30.0%
AAGCTATTCTAGTGAGATTA+TGG - chr7.2:90099401-90099420 MS.gene76957:intron 30.0%
AAGTATCCATGTTCTATACA+AGG - chr7.2:90101802-90101821 MS.gene76957:intron 30.0%
AATGCTTGACTATCATATTG+GGG - chr7.2:90100320-90100339 MS.gene76957:intron 30.0%
ACAATAGTGGCTTAAAATCA+TGG - chr7.2:90101862-90101881 MS.gene76957:CDS 30.0%
ACCTTGTCAAAGAACAAAAT+AGG + chr7.2:90102862-90102881 None:intergenic 30.0%
ATACTTTAGGTAAGATGGAA+AGG + chr7.2:90100573-90100592 None:intergenic 30.0%
ATATCAAGACAATAAACCTG+TGG + chr7.2:90100843-90100862 None:intergenic 30.0%
ATCAATTATTTACAGGTCAG+TGG + chr7.2:90102837-90102856 None:intergenic 30.0%
ATGCAAACATTTGGTACAAT+AGG + chr7.2:90103475-90103494 None:intergenic 30.0%
ATTCTAAGCATTCTTATGGT+TGG - chr7.2:90103650-90103669 MS.gene76957:CDS 30.0%
CAATCTTGTCATTATAAAGG+AGG - chr7.2:90102909-90102928 MS.gene76957:intron 30.0%
CACATGCTCATTATTGAAAA+AGG + chr7.2:90101943-90101962 None:intergenic 30.0%
CCGAACATAATTAATGTATC+TGG - chr7.2:90098981-90099000 MS.gene76957:intron 30.0%
CTAACCATGTTTAATGCATT+CGG - chr7.2:90102380-90102399 MS.gene76957:intron 30.0%
GATAACATTCCAAAATGGAT+TGG - chr7.2:90100411-90100430 MS.gene76957:intron 30.0%
GATGAAGAAAATGATGAAGA+AGG + chr7.2:90098674-90098693 None:intergenic 30.0%
GTATGTATTGCATTGTACAT+TGG - chr7.2:90101237-90101256 MS.gene76957:intron 30.0%
GTGAACTTTAGCAAATATTG+CGG + chr7.2:90101560-90101579 None:intergenic 30.0%
GTGTGTATTTGTTTGTATTC+GGG - chr7.2:90102253-90102272 MS.gene76957:intron 30.0%
GTTCTTCAGTATAAACAGTT+AGG - chr7.2:90099605-90099624 MS.gene76957:intron 30.0%
GTTTCTATTCTGATTAGCAT+TGG - chr7.2:90101354-90101373 MS.gene76957:intron 30.0%
TAGAAATGACATATACGACA+TGG - chr7.2:90099718-90099737 MS.gene76957:CDS 30.0%
TCATAAAATTGTCTGTTGGT+TGG - chr7.2:90102939-90102958 MS.gene76957:intron 30.0%
TGAACTTTAGCAAATATTGC+GGG + chr7.2:90101559-90101578 None:intergenic 30.0%
TGATATATAACCATACCAAC+AGG + chr7.2:90102201-90102220 None:intergenic 30.0%
TGCTTATTTACATACATGAC+AGG - chr7.2:90101473-90101492 MS.gene76957:intron 30.0%
TGGTATCTTAGTTATATTGG+AGG - chr7.2:90099943-90099962 MS.gene76957:intron 30.0%
TGTGATTCTAAGCATTCTTA+TGG - chr7.2:90103646-90103665 MS.gene76957:CDS 30.0%
TGTTATAGTTCCAAACTTTG+TGG - chr7.2:90100109-90100128 MS.gene76957:intron 30.0%
TTCAGTATAAACAGTTAGGA+TGG - chr7.2:90099609-90099628 MS.gene76957:intron 30.0%
TTGTGAAAAAACAAGAAACG+CGG + chr7.2:90100298-90100317 None:intergenic 30.0%
! AACACATGCACACTTTTAAT+AGG + chr7.2:90102136-90102155 None:intergenic 30.0%
! ATGTCGTATATGTCATTTCT+AGG + chr7.2:90099719-90099738 None:intergenic 30.0%
! CTTATACCATTTGGAACAAA+CGG + chr7.2:90100735-90100754 None:intergenic 30.0%
! GCTGAAGCTTTTAAATCTAA+GGG - chr7.2:90101321-90101340 MS.gene76957:intron 30.0%
! GGAATGTTATCTTTGAAAAC+AGG + chr7.2:90100402-90100421 None:intergenic 30.0%
! TCCTATTTTGTTCTTTGACA+AGG - chr7.2:90102858-90102877 MS.gene76957:intron 30.0%
! TGTCGTATATGTCATTTCTA+GGG + chr7.2:90099718-90099737 None:intergenic 30.0%
!! AGAATCGATTTCTAAGATCA+TGG - chr7.2:90101697-90101716 MS.gene76957:CDS 30.0%
!! CTGCTTTAAGATAATGATCA+TGG - chr7.2:90100066-90100085 MS.gene76957:intron 30.0%
!! GTGAGAAGTATTAGTAGAAT+CGG + chr7.2:90100483-90100502 None:intergenic 30.0%
!! TAGCTATTTTGGAGACTTTA+TGG - chr7.2:90099140-90099159 MS.gene76957:intron 30.0%
!! TGGTACATTGATTTCTAACA+TGG + chr7.2:90102817-90102836 None:intergenic 30.0%
AAAAAATAACACTGACCTGG+CGG + chr7.2:90102747-90102766 None:intergenic 35.0%
ACAATGCAATACATACCAAG+AGG + chr7.2:90101233-90101252 None:intergenic 35.0%
ACAGAGTGCATTTATAACAC+AGG + chr7.2:90100196-90100215 None:intergenic 35.0%
ACAGTTACATCATGAAGCAT+GGG - chr7.2:90103616-90103635 MS.gene76957:CDS 35.0%
AGCATGTGCGAGATAAAAAT+TGG - chr7.2:90101955-90101974 MS.gene76957:CDS 35.0%
AGTTATATTGGAGGATGTGT+AGG - chr7.2:90099952-90099971 MS.gene76957:intron 35.0%
ATTGTACATTGGAGTATGCT+TGG - chr7.2:90101248-90101267 MS.gene76957:intron 35.0%
ATTTCAAAACGAAGAGATGG+TGG + chr7.2:90103532-90103551 None:intergenic 35.0%
CATGTTCTATACAAGGTTGT+GGG - chr7.2:90101809-90101828 MS.gene76957:intron 35.0%
CTATCACACATTCTTTCTGT+TGG - chr7.2:90101664-90101683 MS.gene76957:CDS 35.0%
CTCACTATAATTCTCTGTCT+TGG - chr7.2:90100498-90100517 MS.gene76957:intron 35.0%
CTTAGATTCTTCAGCAGAAT+TGG + chr7.2:90100817-90100836 None:intergenic 35.0%
GACCTTATACTTCTTGGAAT+CGG - chr7.2:90098824-90098843 MS.gene76957:intron 35.0%
GATTTAAAAGCTTCAGCCAA+AGG + chr7.2:90101318-90101337 None:intergenic 35.0%
GATTTGCCAATAGGCATAAT+TGG - chr7.2:90101204-90101223 MS.gene76957:intron 35.0%
GGGAAAAAATACTTTGGGTA+TGG - chr7.2:90102092-90102111 MS.gene76957:CDS 35.0%
GGTATGAGTATCTATGTGTA+TGG + chr7.2:90099772-90099791 None:intergenic 35.0%
GTCTTTGACCTTATACTTCT+TGG - chr7.2:90098818-90098837 MS.gene76957:intron 35.0%
GTTATTGTTGTCATCTTTGC+TGG - chr7.2:90100678-90100697 MS.gene76957:intron 35.0%
TAATGATCATGGACATGTGA+TGG - chr7.2:90100077-90100096 MS.gene76957:intron 35.0%
TACAGTTACATCATGAAGCA+TGG - chr7.2:90103615-90103634 MS.gene76957:CDS 35.0%
TATTAGTAGAATCGGAGCTA+AGG + chr7.2:90100475-90100494 None:intergenic 35.0%
TCAATTATTAAGGCCTTGCT+TGG - chr7.2:90099251-90099270 MS.gene76957:intron 35.0%
TCTTATATCCGTATTGTACC+CGG - chr7.2:90102305-90102324 MS.gene76957:intron 35.0%
TGAAAAATTCTCCACATACC+AGG + chr7.2:90098908-90098927 None:intergenic 35.0%
TGGACTATTAGATTCACAGA+AGG + chr7.2:90101090-90101109 None:intergenic 35.0%
TTAAGCCACTATTGTCAAGT+GGG + chr7.2:90101857-90101876 None:intergenic 35.0%
TTCAGAATACATCTCACAAC+AGG - chr7.2:90103197-90103216 MS.gene76957:intron 35.0%
TTGGAGACTTTATGGAAATG+AGG - chr7.2:90099148-90099167 MS.gene76957:intron 35.0%
TTGTTCACGTTTCTTGTCAT+CGG - chr7.2:90098712-90098731 MS.gene76957:CDS 35.0%
TTTAAGCCACTATTGTCAAG+TGG + chr7.2:90101858-90101877 None:intergenic 35.0%
! CTCTCTATTTAAGGCCTATT+TGG + chr7.2:90099534-90099553 None:intergenic 35.0%
! GAGAAGAAGATTAAGTACTG+AGG - chr7.2:90103270-90103289 MS.gene76957:intron 35.0%
! GGCTGAAGCTTTTAAATCTA+AGG - chr7.2:90101320-90101339 MS.gene76957:intron 35.0%
! GTTGGTGTTTATGCGATATA+TGG - chr7.2:90103668-90103687 MS.gene76957:CDS 35.0%
! TAACATGTTCTTATTTGGCC+AGG - chr7.2:90103501-90103520 MS.gene76957:intron 35.0%
! TAGGGTATCAACTCAAATAC+TGG + chr7.2:90099700-90099719 None:intergenic 35.0%
!! ATTCCAAAATGGATTGGACA+TGG - chr7.2:90100417-90100436 MS.gene76957:intron 35.0%
!! TCTTGGTGTTAGAGAATCAT+CGG - chr7.2:90100515-90100534 MS.gene76957:intron 35.0%
!! TTAAGTACTGAGGTTATCTC+AGG - chr7.2:90103280-90103299 MS.gene76957:intron 35.0%
AACAATAGTCTCATCTGCAG+TGG + chr7.2:90103711-90103730 None:intergenic 40.0%
AATGTCGCAAAAAGCAACGT+TGG + chr7.2:90102016-90102035 None:intergenic 40.0%
ACAATAGTCTCATCTGCAGT+GGG + chr7.2:90103710-90103729 None:intergenic 40.0%
ACCCAAATCTGAGAATGAAG+AGG + chr7.2:90101598-90101617 None:intergenic 40.0%
AGGCTTCCAATTATGCCTAT+TGG + chr7.2:90101213-90101232 None:intergenic 40.0%
ATGGTTCCATACAGTCTTCT+AGG - chr7.2:90101282-90101301 MS.gene76957:intron 40.0%
ATTGGACATGGTCTAGACAT+CGG - chr7.2:90100429-90100448 MS.gene76957:intron 40.0%
CAACAATAGACTTTGGCATC+TGG + chr7.2:90100989-90101008 None:intergenic 40.0%
CCAAACTTTGTGGCTTATTC+TGG - chr7.2:90100119-90100138 MS.gene76957:intron 40.0%
CCAAATCTGAGAATGAAGAG+GGG + chr7.2:90101596-90101615 None:intergenic 40.0%
CCACAACCTTGTATAGAACA+TGG + chr7.2:90101811-90101830 None:intergenic 40.0%
CCAGAATAAGCCACAAAGTT+TGG + chr7.2:90100122-90100141 None:intergenic 40.0%
CCATGTTCTATACAAGGTTG+TGG - chr7.2:90101808-90101827 MS.gene76957:intron 40.0%
CCCAAATCTGAGAATGAAGA+GGG + chr7.2:90101597-90101616 None:intergenic 40.0%
CCCTCTTCATTCTCAGATTT+GGG - chr7.2:90101594-90101613 MS.gene76957:CDS 40.0%
CTTATATCCGTATTGTACCC+GGG - chr7.2:90102306-90102325 MS.gene76957:intron 40.0%
CTTCATTCTCAGATTTGGGT+TGG - chr7.2:90101598-90101617 MS.gene76957:CDS 40.0%
GACTCCGAATGCATTAAACA+TGG + chr7.2:90102387-90102406 None:intergenic 40.0%
GGTTTCTTTCTGTAATGCAG+CGG - chr7.2:90100140-90100159 MS.gene76957:intron 40.0%
GTAGTCTTCTTTGCGTATGT+TGG - chr7.2:90100777-90100796 MS.gene76957:CDS 40.0%
GTCTCACAAGTGATTATGTC+AGG - chr7.2:90099486-90099505 MS.gene76957:intron 40.0%
GTGATCATTACCTGTTGGTA+TGG - chr7.2:90102188-90102207 MS.gene76957:CDS 40.0%
TACAGTAGCTCCTGTAAAGA+CGG + chr7.2:90100760-90100779 None:intergenic 40.0%
TCTTCTCCTAGAAGACTGTA+TGG + chr7.2:90101291-90101310 None:intergenic 40.0%
TGAAGAATCTAAGAAGCCAC+AGG - chr7.2:90100824-90100843 MS.gene76957:CDS 40.0%
TGCTATCTAGGTTTATGCAG+CGG - chr7.2:90103420-90103439 MS.gene76957:intron 40.0%
TGTAAATAAGCACATGCCTC+CGG + chr7.2:90101465-90101484 None:intergenic 40.0%
TGTTTATCATGAAGCTCCAG+AGG - chr7.2:90103727-90103746 MS.gene76957:CDS 40.0%
TTAGTCAAAGCACAGCAATG+TGG + chr7.2:90102426-90102445 None:intergenic 40.0%
TTCTTTCTGATGAGCAGTCT+CGG - chr7.2:90101500-90101519 MS.gene76957:intron 40.0%
TTGGTACAATAGGAACTCCA+GGG + chr7.2:90103465-90103484 None:intergenic 40.0%
TTGTTACACGTCTGTTGAGT+TGG + chr7.2:90101110-90101129 None:intergenic 40.0%
TTTCAGAGGGATTTGCCAAT+AGG - chr7.2:90101195-90101214 MS.gene76957:intron 40.0%
TTTGGTACAATAGGAACTCC+AGG + chr7.2:90103466-90103485 None:intergenic 40.0%
! AAGACGGGTCTTATACCATT+TGG + chr7.2:90100744-90100763 None:intergenic 40.0%
! AGACCATGTCCAATCCATTT+TGG + chr7.2:90100423-90100442 None:intergenic 40.0%
! ATGCTTGGTGATTACTGGAA+TGG - chr7.2:90101263-90101282 MS.gene76957:intron 40.0%
! CGTAATACTGATTGATGTGC+CGG - chr7.2:90101443-90101462 MS.gene76957:intron 40.0%
! CTCCGATTCCAAGAAGTATA+AGG + chr7.2:90098829-90098848 None:intergenic 40.0%
! CTTGCTATAGTTGTTGCAGT+CGG - chr7.2:90102700-90102719 MS.gene76957:intron 40.0%
! CTTTTTGCGACATTCGACAT+TGG - chr7.2:90102022-90102041 MS.gene76957:CDS 40.0%
! TCGAAGTATCTTCAGCTAAG+CGG - chr7.2:90102584-90102603 MS.gene76957:intron 40.0%
! TTTATGCAGCGGATTCAGTA+GGG - chr7.2:90103431-90103450 MS.gene76957:intron 40.0%
!! ATTAGCATTGGTGCTATTGC+TGG - chr7.2:90101366-90101385 MS.gene76957:intron 40.0%
!! TTGAGGTTGATGTTTCCAAC+TGG - chr7.2:90100706-90100725 MS.gene76957:intron 40.0%
AAGACAGCTCGCGATAATTC+TGG - chr7.2:90098770-90098789 MS.gene76957:CDS 45.0%
AAGTATCTTCAGCTAAGCGG+CGG - chr7.2:90102587-90102606 MS.gene76957:intron 45.0%
AATGAAGCCCGGGTACAATA+CGG + chr7.2:90102316-90102335 None:intergenic 45.0%
ACAAGGTTGTGGGACATTAG+TGG - chr7.2:90101819-90101838 MS.gene76957:intron 45.0%
ACAGTAGCTCCTGTAAAGAC+GGG + chr7.2:90100759-90100778 None:intergenic 45.0%
AGGCATAATTGGAAGCCTCT+TGG - chr7.2:90101215-90101234 MS.gene76957:intron 45.0%
CAAGTGATCACTTCATGAGC+AGG - chr7.2:90103227-90103246 MS.gene76957:intron 45.0%
CAATAGTCTCATCTGCAGTG+GGG + chr7.2:90103709-90103728 None:intergenic 45.0%
CAGAAACAGCAACAGCAATG+AGG + chr7.2:90102627-90102646 None:intergenic 45.0%
CATGACCCACTTGACAATAG+TGG - chr7.2:90101849-90101868 MS.gene76957:CDS 45.0%
CATTCTTTCTGTTGGTACGC+TGG - chr7.2:90101672-90101691 MS.gene76957:CDS 45.0%
CCCCTCTTCATTCTCAGATT+TGG - chr7.2:90101593-90101612 MS.gene76957:CDS 45.0%
CCTGAACATAGAGACCAACA+AGG + chr7.2:90101407-90101426 None:intergenic 45.0%
CTTACAACAGCACTCCTTGT+TGG - chr7.2:90101390-90101409 MS.gene76957:intron 45.0%
GCTATATCTTGGACTTGGCA+GGG - chr7.2:90101522-90101541 MS.gene76957:intron 45.0%
GGAGGATGTGTAGGCTAAAA+GGG - chr7.2:90099961-90099980 MS.gene76957:intron 45.0%
GGTAAGATGGAAAGGAACCT+TGG + chr7.2:90100565-90100584 None:intergenic 45.0%
GGTATAAGACCCGTCTTTAC+AGG - chr7.2:90100747-90100766 MS.gene76957:CDS 45.0%
GTTGTTGTACTTCGCTGGAA+GGG - chr7.2:90102550-90102569 MS.gene76957:intron 45.0%
TCATCAGACAGAATGAAGCC+CGG + chr7.2:90102327-90102346 None:intergenic 45.0%
TCTAGGAGAAGAAGCTCCTT+TGG - chr7.2:90101299-90101318 MS.gene76957:intron 45.0%
TCTCGATTTCCTGCTGTTGT+TGG - chr7.2:90100231-90100250 MS.gene76957:intron 45.0%
TCTCGGCTATATCTTGGACT+TGG - chr7.2:90101517-90101536 MS.gene76957:intron 45.0%
TGAGCAGTGTGTTAATGCTG+CGG - chr7.2:90100600-90100619 MS.gene76957:intron 45.0%
TGATCACTTCATGAGCAGGA+GGG - chr7.2:90103231-90103250 MS.gene76957:intron 45.0%
TGCGACATTCGACATTGGTA+GGG - chr7.2:90102027-90102046 MS.gene76957:CDS 45.0%
TGGAGGATGTGTAGGCTAAA+AGG - chr7.2:90099960-90099979 MS.gene76957:intron 45.0%
TGGTCTCCGTTTGTTCCAAA+TGG - chr7.2:90100726-90100745 MS.gene76957:CDS 45.0%
TGTTGTTGTACTTCGCTGGA+AGG - chr7.2:90102549-90102568 MS.gene76957:intron 45.0%
TTCGTTCATGACAGTGACCA+AGG - chr7.2:90100545-90100564 MS.gene76957:intron 45.0%
TTGCGACATTCGACATTGGT+AGG - chr7.2:90102026-90102045 MS.gene76957:CDS 45.0%
! AATACTGATTGATGTGCCGG+AGG - chr7.2:90101446-90101465 MS.gene76957:intron 45.0%
! CATCTTTGCTGGAGCTTTTG+AGG - chr7.2:90100689-90100708 MS.gene76957:intron 45.0%
! CATGTGTTGTTGTACTTCGC+TGG - chr7.2:90102545-90102564 MS.gene76957:intron 45.0%
! CCTTGTTGGTCTCTATGTTC+AGG - chr7.2:90101404-90101423 MS.gene76957:intron 45.0%
! GGAGTATGCTTGGTGATTAC+TGG - chr7.2:90101258-90101277 MS.gene76957:intron 45.0%
! GTTTATGCAGCGGATTCAGT+AGG - chr7.2:90103430-90103449 MS.gene76957:intron 45.0%
!! AATCGGAGCTAAGGCATTGA+TGG + chr7.2:90100466-90100485 None:intergenic 45.0%
!! CTCATTGCTGTTGCTGTTTC+TGG - chr7.2:90102625-90102644 MS.gene76957:intron 45.0%
ACTTCATGAGCAGGAGGGTA+CGG - chr7.2:90103236-90103255 MS.gene76957:intron 50.0%
AGGTCCAACGTCATGAGCAA+CGG + chr7.2:90098888-90098907 None:intergenic 50.0%
AGTATCTTCAGCTAAGCGGC+GGG - chr7.2:90102588-90102607 MS.gene76957:intron 50.0%
ATGACGTTGGACCTGGTATG+TGG - chr7.2:90098894-90098913 MS.gene76957:CDS 50.0%
CATCAGACAGAATGAAGCCC+GGG + chr7.2:90102326-90102345 None:intergenic 50.0%
CGATTTCCTGCTGTTGTTGG+AGG - chr7.2:90100234-90100253 MS.gene76957:intron 50.0%
CTTGGAATCGGAGCTTCCAT+CGG - chr7.2:90098836-90098855 MS.gene76957:intron 50.0%
GAGAGATGACGCGTTTGGAT+CGG + chr7.2:90098742-90098761 None:intergenic 50.0%
GAGCAGTCTCGGCTATATCT+TGG - chr7.2:90101511-90101530 MS.gene76957:intron 50.0%
GCCGGTAACAACGAAGATAC+CGG + chr7.2:90098864-90098883 None:intergenic 50.0%
GCCGGTATCTTCGTTGTTAC+CGG - chr7.2:90098860-90098879 MS.gene76957:intron 50.0%
GGCTATATCTTGGACTTGGC+AGG - chr7.2:90101521-90101540 MS.gene76957:intron 50.0%
GTGATCACTTCATGAGCAGG+AGG - chr7.2:90103230-90103249 MS.gene76957:intron 50.0%
GTGTTGCCAGCATTATGGCT+GGG - chr7.2:90101623-90101642 MS.gene76957:CDS 50.0%
TATCTTGGACTTGGCAGGGA+TGG - chr7.2:90101526-90101545 MS.gene76957:intron 50.0%
TCTGAGAATGAAGAGGGGTG+TGG + chr7.2:90101591-90101610 None:intergenic 50.0%
TCTTGCTCTTCATTTCCGCC+AGG - chr7.2:90102729-90102748 MS.gene76957:intron 50.0%
TGATGGAGAGATGACGCGTT+TGG + chr7.2:90098747-90098766 None:intergenic 50.0%
TGGAACAAACGGAGACCAGT+TGG + chr7.2:90100724-90100743 None:intergenic 50.0%
TGGCTGTGTTGCCAGCATTA+TGG - chr7.2:90101618-90101637 MS.gene76957:CDS 50.0%
TGTGTTGCCAGCATTATGGC+TGG - chr7.2:90101622-90101641 MS.gene76957:CDS 50.0%
! TCAGTAGGGTTTTCTTGCCC+TGG - chr7.2:90103445-90103464 MS.gene76957:intron 50.0%
!! CGACATTGGTAGGGTTAGTC+CGG - chr7.2:90102036-90102055 MS.gene76957:CDS 50.0%
AACGTCATGAGCAACGGTGC+CGG + chr7.2:90098882-90098901 None:intergenic 55.0%
AAGCAGCCCAGCCATAATGC+TGG + chr7.2:90101632-90101651 None:intergenic 55.0%
AGTCTCATCTGCAGTGGGGT+CGG + chr7.2:90103705-90103724 None:intergenic 55.0%
GCTCGCGATAATTCTGGACG+TGG - chr7.2:90098776-90098795 MS.gene76957:intron 55.0%
GGTCAAAGACACCAAGCCGA+CGG + chr7.2:90098808-90098827 None:intergenic 55.0%
GTCAAAGACACCAAGCCGAC+GGG + chr7.2:90098807-90098826 None:intergenic 55.0%
GTTGCTCATGACGTTGGACC+TGG - chr7.2:90098887-90098906 MS.gene76957:intron 55.0%
TACGCTCCTCCAACAACAGC+AGG + chr7.2:90100243-90100262 None:intergenic 55.0%
TCGCGAGCTGTCTTCTCTGA+TGG + chr7.2:90098764-90098783 None:intergenic 55.0%
! AACGAAGATACCGGCACCGA+TGG + chr7.2:90098855-90098874 None:intergenic 55.0%
! ATGAAGAGGGGTGTGGCGTT+TGG + chr7.2:90101584-90101603 None:intergenic 55.0%
! TGAAGAGGGGTGTGGCGTTT+GGG + chr7.2:90101583-90101602 None:intergenic 55.0%
!! GAAGAGATGGTGGACGTACC+TGG + chr7.2:90103522-90103541 None:intergenic 55.0%
ATCGGAGCTTCCATCGGTGC+CGG - chr7.2:90098842-90098861 MS.gene76957:intron 60.0%
CAGTGGGGTCGGCATGATAC+TGG + chr7.2:90103694-90103713 None:intergenic 60.0%
CTGGACGTGGTCTTTCCCGT+CGG - chr7.2:90098789-90098808 MS.gene76957:intron 60.0%
GGCACCGTTGCTCATGACGT+TGG - chr7.2:90098881-90098900 MS.gene76957:intron 60.0%
TCTTCAGCTAAGCGGCGGGA+AGG - chr7.2:90102592-90102611 MS.gene76957:intron 60.0%
! ATGAGCAGGAGGGTACGGCA+CGG - chr7.2:90103241-90103260 MS.gene76957:intron 60.0%
! GAAGAGGGGTGTGGCGTTTG+GGG + chr7.2:90101582-90101601 None:intergenic 60.0%
! CGTGGTCTTTCCCGTCGGCT+TGG - chr7.2:90098794-90098813 MS.gene76957:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 90098650 90103763 90098650 ID=MS.gene76957
chr7.2 mRNA 90098650 90103763 90098650 ID=MS.gene76957.t1;Parent=MS.gene76957
chr7.2 exon 90103505 90103763 90103505 ID=MS.gene76957.t1.exon1;Parent=MS.gene76957.t1
chr7.2 CDS 90103505 90103763 90103505 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90101847 90102253 90101847 ID=MS.gene76957.t1.exon2;Parent=MS.gene76957.t1
chr7.2 CDS 90101847 90102253 90101847 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90101568 90101744 90101568 ID=MS.gene76957.t1.exon3;Parent=MS.gene76957.t1
chr7.2 CDS 90101568 90101744 90101568 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90100988 90101212 90100988 ID=MS.gene76957.t1.exon4;Parent=MS.gene76957.t1
chr7.2 CDS 90100988 90101212 90100988 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90100720 90100896 90100720 ID=MS.gene76957.t1.exon5;Parent=MS.gene76957.t1
chr7.2 CDS 90100720 90100896 90100720 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90099663 90099890 90099663 ID=MS.gene76957.t1.exon6;Parent=MS.gene76957.t1
chr7.2 CDS 90099663 90099890 90099663 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90098891 90098983 90098891 ID=MS.gene76957.t1.exon7;Parent=MS.gene76957.t1
chr7.2 CDS 90098891 90098983 90098891 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
chr7.2 exon 90098650 90098793 90098650 ID=MS.gene76957.t1.exon8;Parent=MS.gene76957.t1
chr7.2 CDS 90098650 90098793 90098650 ID=cds.MS.gene76957.t1;Parent=MS.gene76957.t1
Gene Sequence

>MS.gene76957

ATGGGAATTCGTAGCAATTCTCCTTCTTCATCATTTTCTTCATCTTCGTCATCTTCTACGTGTTGTTCACGTTTCTTGTCATCGGCACTCCGATCCAAACGCGTCATCTCTCCATCAGAGAAGACAGCTCGCGATAATTCTGGACGTGGTCTTTCCCGTCGGCTTGGTGTCTTTGACCTTATACTTCTTGGAATCGGAGCTTCCATCGGTGCCGGTATCTTCGTTGTTACCGGCACCGTTGCTCATGACGTTGGACCTGGTATGTGGAGAATTTTTCAATTTATTTACTATTCCAGTCTTAAATATAAGAAAAGAAAAGAAAAAAAAAAGTCCGAACATAATTAATGTATCTGGTTAAAGATTTGAACCAGATACATTTATTTTGTTTGACTTTTTTATCTTGTATTCGAGAGCGAAGTAACTCAATTATCAATTGACAAGTGTTTATCATATATAAGTGCTTATGTATAAGTTCATTTTATATAAGCTATAGCTATTTTGGAGACTTTATGGAAATGAGGTGTAAACAGTTTATGATATGTCATAAGTTGTTTTTGTTTATTTGGAATAGTCTCGTAAGTGTTTATGTAAGTAGATAAGCTCAATTATTAAGGCCTTGCTTGGATAAACAAAATTAATGGCTTATAACGTAAGTGCTGATAAATTGCTTATGTATAAGCTGTTTTTACTTTTTATAGCGAAAGATAAAATAAGTTAGACCGTTTTTATATAAGGCATAAGCTGTTTTTGTAAGCTATTCTAGTGAGATTATGGAAATAAGCTGAAAATAGTTTATGGAGATGTCTGTAAGCTGTTTTCATAAGCTCTCTCAAACAGTCTCACAAGTGATTATGTCAGGAGATAAGCTCAAATAAGCTAATCCAAATAGGCCTTAAATAGAGAGATATTTGTATAAAATGAAATATTATCTTATACAAGCTCAAAATGGAGCTTTGTTCTTCAGTATAAACAGTTAGGATGGTTTCGATTTTTGTGTTTTGCATATGATATTGATTGAATATTGAATTTTCTTCAGTAAGGGTGTTTCCAGTATTTGAGTTGATACCCTAGAAATGACATATACGACATGGAAGTGATTAAGTGAAAGTGAACTCTACACCATACACATAGATACTCATACCAGTAATAATTTGTGAAAATAGAAGTAATTAAATACACATGTGTGAGTTGAGTACTGTGTCATTGACACTTTTCTGACACCAAACACGTCTTTAGTTAAGTTTGCATTAGTTATTGCAGACATATAATATTATATCATTTATCTATTTATTATGGTATCTTAGTTATATTGGAGGATGTGTAGGCTAAAAGGGTATCTAATGTGCTGTGATAATGAACAATGCTTACTTGTTATCTTGAAAAATCAATCTTAATTACACATTTATCTATGTACATCTGCTTTAAGATAATGATCATGGACATGTGATGGTTATTTTGCTGTTATAGTTCCAAACTTTGTGGCTTATTCTGGTTTCTTTCTGTAATGCAGCGGTAACATTAAGTTTTATATTTGCTGGAGCATCCTGTGTTATAAATGCACTCTGTTACGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGAGCGTATCTATATACATATACGGCTTTCAATGAACTTACCGCGTTTCTTGTTTTTTCACAATTAATGCTTGACTATCATATTGGGGCAGCTAGCATAGCAAGAAGTTTAGCAAATTATATTGTTACATTTCTAGAGATCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGACATGGTCTAGACATCGGAAACGTCTTATCCATCAATGCCTTAGCTCCGATTCTACTAATACTTCTCACTATAATTCTCTGTCTTGGTGTTAGAGAATCATCGGCTGTGAATTCGTTCATGACAGTGACCAAGGTTCCTTTCCATCTTACCTAAAGTATTTAACATTGAGCAGTGTGTTAATGCTGCGGTTTCATGTGAGAAACGAATCACTAGTTATTTTACTGTCTTCTGCAGATAATCATTGTTATTGTTGTCATCTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCGTTTGTTCCAAATGGTATAAGACCCGTCTTTACAGGAGCTACTGTAGTCTTCTTTGCGTATGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAAGCCACAGGTTTATTGTCTTGATATTGCTCCAATGCTTTATGAATTTTCTAAATGTCATATCTGTTATCTGATGTTTCTGTTGAGAATGATAATGATGTTAGAAGTAAACGTTAACTGATGTTTCTATTTGAATTTTTGTATCATCTACCAGATGCCAAAGTCTATTGTTGATACTTTTACATTAATTATATTAGAAGTAAATAGTAGATATTCGGATTTTAAATAGTTGTTATAAATTAACTATTAGTCCTTCTGTGAATCTAATAGTCCAACTCAACAGACGTGTAACAAAAACTATCTTGCAATAATGTATTCGTCTACTAATATTTTCTTTTTATCTTATCTTATTTTTGACATTTCAGAGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTGGTATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCATACAGTCTTCTAGGAGAAGAAGCTCCTTTGGCTGAAGCTTTTAAATCTAAGGGATTAAAATTTGTTTCTATTCTGATTAGCATTGGTGCTATTGCTGGACTTACAACAGCACTCCTTGTTGGTCTCTATGTTCAGGTGAATCACGTTCACGTCGTAATACTGATTGATGTGCCGGAGGCATGTGCTTATTTACATACATGACAGGTTTTTTCTTTCTGATGAGCAGTCTCGGCTATATCTTGGACTTGGCAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACCCCAAACGCCACACCCCTCTTCATTCTCAGATTTGGGTTGGCTGTGTTGCCAGCATTATGGCTGGGCTGCTTAATGTGCGCATGCTATCACACATTCTTTCTGTTGGTACGCTGGTAAGAATCGATTTCTAAGATCATGGTAGTCAACAAAATGCATATATGTTCTATCTCATCTTGTAATACTAAGTAGTATTTATGAAGTCCAAATACTTCAAAATTGATAAGTATCCATGTTCTATACAAGGTTGTGGGACATTAGTGGAGATGCACATGACCCACTTGACAATAGTGGCTTAAAATCATGGTAGATTTATAGAATTATCAGAGTTGTCTCTTAATGAACCATACTAAAAAGCTTTACCTTTTTCAATAATGAGCATGTGCGAGATAAAAATTGGCAATTGAATTGAGTCAAAACTTCTTTTAAATAGGTCCAACGTTGCTTTTTGCGACATTCGACATTGGTAGGGTTAGTCCGGTTAGAAATACTTATATTTTTTGACATGATTATAGGGAAAAAATACTTTGGGTATGGAAAAGTGTAACATATGTGCCTATTAAAAGTGTGCATGTGTTCTTTTGTTATGATAAGCGTCTTTTTGTAAATTGTGATCATTACCTGTTGGTATGGTTATATATCATTTAGAAATTAGAAATATCATTGTGTTTGGATGTGTGTATTTGTTTGTATTCGGGTATCTAAGTCATATCATATTTTAAGAATTTCTTATATCCGTATTGTACCCGGGCTTCATTCTGTCTGATGATGTGTCTCTATACATCAGACGCACCAATAGAATCTAACCATGTTTAATGCATTCGGAGTCCATTTAGCAAATAATACCACATTGCTGTGCTTTGACTAAAATACTCATTATAGTTGAATAATGTTTTGTAAATAGTCGTAGATAACGCCCACACCTGATATTTTTACTTATTTCAGACTGGCTATTCAGTTGTCTCAGCATGTGTTGTTGTACTTCGCTGGAAGGGTAAGACAAATATCGAAGTATCTTCAGCTAAGCGGCGGGAAGGTGTAATTTGCCTCATTGCTGTTGCTGTTTCTGGATTTGCTGCGGGACTCTTGTTCCGTTATGAAACATCAATTATCTTTGTGATTCTTGCTATAGTTGTTGCAGTCGGTGCTTCTCTTGCTCTTCATTTCCGCCAGGTCAGTGTTATTTTTTTTAGTTTTGTTAAATATCTAATGATTAGACTGCAAATTTCAAAATTGCCATGTTAGAAATCAATGTACCACTGACCTGTAAATAATTGATGTCCTATTTTGTTCTTTGACAAGGTATAGAATAACTGTAGTTAGTTTTAATTCAATCTTGTCATTATAAAGGAGGGAAAATATCATAAAATTGTCTGTTGGTTGGTATTGTGTATTTCACTGCTATTTTGTGAAATATTAAGAAGTTAAATTAAATGTACTTCACATAATTATTCCAATTGAACAAAAATCATGTTGATTTGCAAATATTCATTTATGTCTATTGTCTAATATTGATTAACAAAATATTAGTATTTATTTAAAAAATTAAGAAAGCGAATGTCATCTTATGTAATAAAAAACGAAGGACCTAAATATTTTGATTTGATTTAATATGGAAGTTCAGAATACATCTCACAACAGGAAGAAAACAAGTGATCACTTCATGAGCAGGAGGGTACGGCACGGCTTCGTGAGAAGAAGATTAAGTACTGAGGTTATCTCAGGACTAGTTCTGACATACTTATCAGACATAATAACATTTCACTTTTTGTAACTTATGAGCGTCCATTTTGAATTTCGATGTTGATTTCTCTCAATAATAACGTTCTGTTTTTATCATTTTGCTATCTAGGTTTATGCAGCGGATTCAGTAGGGTTTTCTTGCCCTGGAGTTCCTATTGTACCAAATGTTTGCATCTTCTTTAACATGTTCTTATTTGGCCAGGTACGTCCACCATCTCTTCGTTTTGAAATTTTAGCCAAAATAATACCATATATTTTACAAGGTTAAAGTTGATTATTTTATGAACTTCTTTTTACAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTAAGCATTCTTATGGTTGGTGTTTATGCGATATATGGCCAGTATCATGCCGACCCCACTGCAGATGAGACTATTGTTTATCATGAAGCTCCAGAGGAACCACCTCAATGA
Protein sequence

>MS.gene76957.t1

MGIRSNSPSSSFSSSSSSSTCCSRFLSSALRSKRVISPSEKTARDNSGRGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAVTLSFIFAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYIVTFLEIFPVFKDNIPKWIGHGLDIGNVLSINALAPILLILLTIILCLGVRESSAVNSFMTVTKIIIVIVVIFAGAFEVDVSNWSPFVPNGIRPVFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYSLLGEEAPLAEAFKSKGLKFVSILISIGAIAGLTTALLVGLYVQSRLYLGLGRDGLLPAIFAKVHPKRHTPLHSQIWVGCVASIMAGLLNVRMLSHILSVGTLTGYSVVSACVVVLRWKGKTNIEVSSAKRREGVICLIAVAVSGFAAGLLFRYETSIIFVILAIVVAVGASLALHFRQVYAADSVGFSCPGVPIVPNVCIFFNMFLFGQLHHEAWVRFVILSILMVGVYAIYGQYHADPTADETIVYHEAPEEPPQ