Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79917.t1 | XP_003611722.1 | 72.8 | 169 | 39 | 3 | 36 | 204 | 15 | 176 | 6.90E-61 | 243.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79917.t1 | Q3ZC12 | 33.9 | 109 | 72 | 0 | 95 | 203 | 211 | 319 | 8.6e-12 | 72.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79917.t1 | G7K6M3 | 72.8 | 169 | 39 | 3 | 36 | 204 | 15 | 176 | 4.9e-61 | 243.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049821 | MS.gene79917 | -0.832051 | 1.18E-55 | -1.69E-46 |
| MS.gene050442 | MS.gene79917 | -0.800886 | 1.17E-48 | -1.69E-46 |
| MS.gene050953 | MS.gene79917 | -0.808107 | 3.64E-50 | -1.69E-46 |
| MS.gene05414 | MS.gene79917 | -0.809246 | 2.08E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene79917 | -0.870143 | 1.82E-66 | -1.69E-46 |
| MS.gene05423 | MS.gene79917 | -0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene054405 | MS.gene79917 | -0.802693 | 4.97E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene79917 | -0.807273 | 5.48E-50 | -1.69E-46 |
| MS.gene057414 | MS.gene79917 | -0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene060521 | MS.gene79917 | -0.804205 | 2.42E-49 | -1.69E-46 |
| MS.gene060572 | MS.gene79917 | -0.815089 | 1.11E-51 | -1.69E-46 |
| MS.gene060634 | MS.gene79917 | 0.881297 | 2.70E-70 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79917.t1 | MTR_5g017130 | 72.781 | 169 | 39 | 3 | 36 | 204 | 15 | 176 | 6.01e-84 | 246 |
| MS.gene79917.t1 | MTR_8g107310 | 50.000 | 110 | 53 | 1 | 95 | 204 | 185 | 292 | 7.68e-29 | 109 |
| MS.gene79917.t1 | MTR_8g031560 | 45.000 | 120 | 58 | 2 | 91 | 204 | 163 | 280 | 8.88e-26 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79917.t1 | AT3G11400 | 46.296 | 108 | 57 | 1 | 97 | 204 | 188 | 294 | 6.93e-26 | 101 |
| MS.gene79917.t1 | AT3G11400 | 46.296 | 108 | 57 | 1 | 97 | 204 | 215 | 321 | 1.40e-25 | 101 |
| MS.gene79917.t1 | AT5G06000 | 44.860 | 107 | 58 | 1 | 97 | 203 | 181 | 286 | 1.32e-24 | 98.6 |
Find 61 sgRNAs with CRISPR-Local
Find 381 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTATGACCAGAGCTTCT+TGG | 0.303721 | 3.1:+65075320 | None:intergenic |
| CCTATACTTAGGTTGTTGTT+GGG | 0.330100 | 3.1:+65074937 | None:intergenic |
| TGGAAAAGCTGAAGCAAATC+AGG | 0.330156 | 3.1:+65075128 | None:intergenic |
| TCTGGCTGTAGTGCCCGTTT+TGG | 0.374535 | 3.1:-65075059 | MS.gene79917:CDS |
| GCCTATACTTAGGTTGTTGT+TGG | 0.395770 | 3.1:+65074936 | None:intergenic |
| AACCCTGATCTCCTTAAGTT+CGG | 0.400139 | 3.1:-65078088 | MS.gene79917:CDS |
| CCGTAATACCCATGTCTTTG+TGG | 0.404244 | 3.1:+65078050 | None:intergenic |
| GATTATATACCTCCGATTGC+GGG | 0.409992 | 3.1:-65075275 | MS.gene79917:CDS |
| TCTCTTCCACAAAAGCCTTC+AGG | 0.423566 | 3.1:+65075234 | None:intergenic |
| ACCCTGATCTCCTTAAGTTC+GGG | 0.425845 | 3.1:-65078087 | MS.gene79917:CDS |
| CCACAAAGACATGGGTATTA+CGG | 0.427307 | 3.1:-65078050 | MS.gene79917:CDS |
| TCCCCGAACTTAAGGAGATC+AGG | 0.428112 | 3.1:+65078085 | None:intergenic |
| CATAGCTGTCCCCGAACTTA+AGG | 0.439402 | 3.1:+65078077 | None:intergenic |
| TTTGTGGAAGAGATGACTAC+TGG | 0.442631 | 3.1:-65075224 | MS.gene79917:CDS |
| CAAAGTTAACAAAGCCAAAA+CGG | 0.447858 | 3.1:+65075045 | None:intergenic |
| TCAGGGTTCCTTGTCTCGTA+TGG | 0.453549 | 3.1:+65075146 | None:intergenic |
| TTCCCTCGTCCAAGAAGCTC+TGG | 0.458758 | 3.1:-65075329 | MS.gene79917:CDS |
| ATTCTTCTTGTTGTTGTCAT+CGG | 0.468802 | 3.1:+65075196 | None:intergenic |
| ATTTCGTACTTAGAGTTGAA+TGG | 0.471893 | 3.1:-65074965 | MS.gene79917:CDS |
| CCCTGCCTGGAGATGACTAC+CGG | 0.474514 | 3.1:-65078160 | None:intergenic |
| AAAGTTAACAAAGCCAAAAC+GGG | 0.488552 | 3.1:+65075046 | None:intergenic |
| TCCACAAAAGCCTTCAGGTA+TGG | 0.489000 | 3.1:+65075239 | None:intergenic |
| AGCACTCTGAGCAGCTTCCC+TGG | 0.503852 | 3.1:+65075019 | None:intergenic |
| TGACCAGAGCTTCTTGGACG+AGG | 0.504818 | 3.1:+65075326 | None:intergenic |
| AGTGCTATTGAAAGAGTCAA+TGG | 0.505594 | 3.1:-65075002 | MS.gene79917:CDS |
| TACTTAGGTTGTTGTTGGGG+AGG | 0.507352 | 3.1:+65074941 | None:intergenic |
| CTATACTTAGGTTGTTGTTG+GGG | 0.510745 | 3.1:+65074938 | None:intergenic |
| AAAAGAAGTCTGTTCTGGTA+GGG | 0.527000 | 3.1:-65078123 | MS.gene79917:CDS |
| GCTTTGTTAACTTTGCCACC+AGG | 0.528180 | 3.1:-65075037 | MS.gene79917:CDS |
| GGTACAAACATACCCGCAAT+CGG | 0.539291 | 3.1:+65075263 | None:intergenic |
| TAATGACATGACCAAAAGAC+TGG | 0.543219 | 3.1:+65075108 | None:intergenic |
| GACCAGAGCTTCTTGGACGA+GGG | 0.546189 | 3.1:+65075327 | None:intergenic |
| GTGCTATTGAAAGAGTCAAT+GGG | 0.563046 | 3.1:-65075001 | MS.gene79917:CDS |
| CTCATGTCCGTGATCCCTCA+TGG | 0.563988 | 3.1:-65078009 | MS.gene79917:CDS |
| CAACTCTAAGTACGAAATTG+TGG | 0.564273 | 3.1:+65074970 | None:intergenic |
| CAGGGTTCCTTGTCTCGTAT+GGG | 0.564470 | 3.1:+65075147 | None:intergenic |
| AAAGAAGTCTGTTCTGGTAG+GGG | 0.566121 | 3.1:-65078122 | MS.gene79917:CDS |
| TGATTATATACCTCCGATTG+CGG | 0.569351 | 3.1:-65075276 | MS.gene79917:CDS |
| GTTGCTGTTGATCAAGACTC+TGG | 0.576816 | 3.1:-65075077 | MS.gene79917:CDS |
| CCCCGAACTTAAGGAGATCA+GGG | 0.592136 | 3.1:+65078086 | None:intergenic |
| CTTTGTTAACTTTGCCACCA+GGG | 0.593347 | 3.1:-65075036 | MS.gene79917:CDS |
| GTTTGTACCTCCATACCTGA+AGG | 0.596305 | 3.1:-65075249 | MS.gene79917:CDS |
| CTATGCCGTCCACAAAGACA+TGG | 0.597462 | 3.1:-65078059 | MS.gene79917:CDS |
| CAAACCACCATGAGGGATCA+CGG | 0.602901 | 3.1:+65078002 | None:intergenic |
| GTCTTGATCAACAGCAACAT+CGG | 0.604102 | 3.1:+65075082 | None:intergenic |
| GGTTCCTTGTCTCGTATGGG+AGG | 0.604191 | 3.1:+65075150 | None:intergenic |
| AATACCCATGTCTTTGTGGA+CGG | 0.607168 | 3.1:+65078054 | None:intergenic |
| GCAACCTCCCATACGAGACA+AGG | 0.608270 | 3.1:-65075154 | MS.gene79917:CDS |
| TTGTGGAAGAGATGACTACT+GGG | 0.618796 | 3.1:-65075223 | MS.gene79917:CDS |
| GGAAAAGCTGAAGCAAATCA+GGG | 0.624618 | 3.1:+65075129 | None:intergenic |
| ACAAAAGCCTTCAGGTATGG+AGG | 0.634993 | 3.1:+65075242 | None:intergenic |
| CCTGCCTGGAGATGACTACC+GGG | 0.635772 | 3.1:-65078159 | None:intergenic |
| CATGAGGGATCACGGACATG+AGG | 0.644139 | 3.1:+65078010 | None:intergenic |
| TCGAATGCAAACCACCATGA+GGG | 0.652949 | 3.1:+65077995 | None:intergenic |
| CCCTGATCTCCTTAAGTTCG+GGG | 0.661793 | 3.1:-65078086 | MS.gene79917:CDS |
| GTCGAATGCAAACCACCATG+AGG | 0.672918 | 3.1:+65077994 | None:intergenic |
| TATGCCGTCCACAAAGACAT+GGG | 0.675272 | 3.1:-65078058 | MS.gene79917:CDS |
| ACAAACATACCCGCAATCGG+AGG | 0.683927 | 3.1:+65075266 | None:intergenic |
| ATCTACAGGTTTCGGCAACG+AGG | 0.691287 | 3.1:-65075366 | MS.gene79917:intron |
| ATGTCCGTGATCCCTCATGG+TGG | 0.691434 | 3.1:-65078006 | MS.gene79917:CDS |
| ACTCTGAGCAGCTTCCCTGG+TGG | 0.730878 | 3.1:+65075022 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAAAAATAAATTATAT+TGG | + | chr3.1:65077624-65077643 | None:intergenic | 0.0% |
| !! | TTCAATAGTATCTAATAAAA+AGG | + | chr3.1:65076314-65076333 | None:intergenic | 15.0% |
| !! | ATATAATCAATACGAAAAAG+TGG | + | chr3.1:65077805-65077824 | None:intergenic | 20.0% |
| !! | CTATTGTATTTCAACATAAA+AGG | - | chr3.1:65076340-65076359 | MS.gene79917:intron | 20.0% |
| !! | TATTAATGTCATTGTAACTT+GGG | + | chr3.1:65075642-65075661 | None:intergenic | 20.0% |
| !! | TTATTAATGTCATTGTAACT+TGG | + | chr3.1:65075643-65075662 | None:intergenic | 20.0% |
| !!! | ACCAAATTTGTTTATTCATT+GGG | + | chr3.1:65075771-65075790 | None:intergenic | 20.0% |
| !!! | AGTTATTTCACATAATCAAT+CGG | + | chr3.1:65077601-65077620 | None:intergenic | 20.0% |
| !!! | ATATTTAGAGCAGTTAATAT+GGG | - | chr3.1:65077639-65077658 | MS.gene79917:intron | 20.0% |
| !!! | CTTTTATGTTGAAATACAAT+AGG | + | chr3.1:65076342-65076361 | None:intergenic | 20.0% |
| !!! | TATATTTAGAGCAGTTAATA+TGG | - | chr3.1:65077638-65077657 | MS.gene79917:intron | 20.0% |
| ! | AAAGTCAATGTATTCGAAAT+TGG | + | chr3.1:65076107-65076126 | None:intergenic | 25.0% |
| ! | AAGAAAGAAAGATGGAAAAT+AGG | - | chr3.1:65076801-65076820 | MS.gene79917:intron | 25.0% |
| ! | AATTGTTTACCTAATGATGT+TGG | + | chr3.1:65075932-65075951 | None:intergenic | 25.0% |
| ! | ACGTTTGATTGAATTTGATT+TGG | + | chr3.1:65075835-65075854 | None:intergenic | 25.0% |
| ! | CAATGAATAAACAAATTTGG+TGG | - | chr3.1:65075770-65075789 | MS.gene79917:intron | 25.0% |
| ! | CAATTATTACCAACATCATT+AGG | - | chr3.1:65075920-65075939 | MS.gene79917:intron | 25.0% |
| ! | GCATTATAAAGAAAGAAAGA+TGG | - | chr3.1:65076793-65076812 | MS.gene79917:intron | 25.0% |
| ! | TCCCAATGAATAAACAAATT+TGG | - | chr3.1:65075767-65075786 | MS.gene79917:intron | 25.0% |
| ! | TCTTTCTTTCTTTATAATGC+CGG | + | chr3.1:65076793-65076812 | None:intergenic | 25.0% |
| ! | TGAAGAATGTTTGATTCTTA+AGG | + | chr3.1:65077502-65077521 | None:intergenic | 25.0% |
| ! | TTCCAAAAAATTGTTCTCTT+GGG | + | chr3.1:65076889-65076908 | None:intergenic | 25.0% |
| ! | TTCTACAAAAGTAGTTTGAT+GGG | + | chr3.1:65077056-65077075 | None:intergenic | 25.0% |
| ! | TTTCCAAAAAATTGTTCTCT+TGG | + | chr3.1:65076890-65076909 | None:intergenic | 25.0% |
| ! | TTTCTACAAAAGTAGTTTGA+TGG | + | chr3.1:65077057-65077076 | None:intergenic | 25.0% |
| !! | CACCAAATTTGTTTATTCAT+TGG | + | chr3.1:65075772-65075791 | None:intergenic | 25.0% |
| !! | TTGGAAAACTTTTCCAATAA+AGG | - | chr3.1:65076903-65076922 | MS.gene79917:intron | 25.0% |
| !!! | TTTTCAAGTTTAAAGAGGAT+GGG | + | chr3.1:65077205-65077224 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAGGCTTATGATT+TGG | + | chr3.1:65077475-65077494 | None:intergenic | 25.0% |
| AAAGTTAACAAAGCCAAAAC+GGG | + | chr3.1:65078049-65078068 | None:intergenic | 30.0% | |
| AATGTTCTAGTGGAAAGATA+TGG | + | chr3.1:65076559-65076578 | None:intergenic | 30.0% | |
| AGAAAGGTTTGTGTATGATT+TGG | + | chr3.1:65075712-65075731 | None:intergenic | 30.0% | |
| AGAATGTTTGATTCTTAAGG+TGG | + | chr3.1:65077499-65077518 | None:intergenic | 30.0% | |
| ATTTCGTACTTAGAGTTGAA+TGG | - | chr3.1:65078127-65078146 | MS.gene79917:CDS | 30.0% | |
| CAAAGTTAACAAAGCCAAAA+CGG | + | chr3.1:65078050-65078069 | None:intergenic | 30.0% | |
| CAATGTATTCGAAATTGGAA+GGG | + | chr3.1:65076102-65076121 | None:intergenic | 30.0% | |
| CATTAAACCACTAAAACCTT+CGG | - | chr3.1:65077257-65077276 | MS.gene79917:intron | 30.0% | |
| GAAAGATATGGTGTAAAGAT+GGG | + | chr3.1:65076547-65076566 | None:intergenic | 30.0% | |
| GAAAGGTTTGTGTATGATTT+GGG | + | chr3.1:65075711-65075730 | None:intergenic | 30.0% | |
| GGAAATAGATATCTTAGTCT+TGG | + | chr3.1:65076867-65076886 | None:intergenic | 30.0% | |
| GGGGATATTAATATTCAAAG+AGG | + | chr3.1:65077330-65077349 | None:intergenic | 30.0% | |
| TCAATGTATTCGAAATTGGA+AGG | + | chr3.1:65076103-65076122 | None:intergenic | 30.0% | |
| TCCAAAAAATTGTTCTCTTG+GGG | + | chr3.1:65076888-65076907 | None:intergenic | 30.0% | |
| TCTACAAAAGTAGTTTGATG+GGG | + | chr3.1:65077055-65077074 | None:intergenic | 30.0% | |
| TGGAGGGAATATGAATAAAA+AGG | + | chr3.1:65075738-65075757 | None:intergenic | 30.0% | |
| TGTTTATTCATTGGGAATGT+TGG | + | chr3.1:65075763-65075782 | None:intergenic | 30.0% | |
| TTTCTATAGGTTGTGTCTTT+GGG | + | chr3.1:65075223-65075242 | None:intergenic | 30.0% | |
| ! | AACAGACTTCTTTTTGTCAT+CGG | + | chr3.1:65074963-65074982 | None:intergenic | 30.0% |
| ! | AAGATAATGAAGCTCTTTTG+AGG | + | chr3.1:65076582-65076601 | None:intergenic | 30.0% |
| ! | AATCTTTTAACGGAGTTGTT+AGG | + | chr3.1:65076207-65076226 | None:intergenic | 30.0% |
| ! | AGTTTTCCGTTCATGTATTT+GGG | + | chr3.1:65076972-65076991 | None:intergenic | 30.0% |
| ! | ATGAATAAAAAGGTGCAGAA+AGG | + | chr3.1:65075728-65075747 | None:intergenic | 30.0% |
| ! | CAACAAGAAGAATTCTTTTC+AGG | - | chr3.1:65077906-65077925 | MS.gene79917:intron | 30.0% |
| ! | GTGGGAAAACAATCTTTTAA+CGG | + | chr3.1:65076217-65076236 | None:intergenic | 30.0% |
| ! | TAGTTTTCCGTTCATGTATT+TGG | + | chr3.1:65076973-65076992 | None:intergenic | 30.0% |
| ! | TTTTCTATAGGTTGTGTCTT+TGG | + | chr3.1:65075224-65075243 | None:intergenic | 30.0% |
| !! | AGACATCGACTATTTTCTAT+AGG | + | chr3.1:65075236-65075255 | None:intergenic | 30.0% |
| !! | ATTCTTCTTGTTGTTGTCAT+CGG | + | chr3.1:65077899-65077918 | None:intergenic | 30.0% |
| !! | GTAATAATTGCGTTTGTTGT+GGG | + | chr3.1:65075910-65075929 | None:intergenic | 30.0% |
| !! | TCTTAAGGTGGATTTTGAAA+AGG | + | chr3.1:65077487-65077506 | None:intergenic | 30.0% |
| !! | TTTGGATGAATTTGATGATG+TGG | + | chr3.1:65075817-65075836 | None:intergenic | 30.0% |
| !!! | AATCAATCGGCTTTTTTGAA+AGG | + | chr3.1:65077588-65077607 | None:intergenic | 30.0% |
| !!! | AATTTTTTGAATTGTGCGCA+AGG | + | chr3.1:65076996-65077015 | None:intergenic | 30.0% |
| !!! | CAAGGTTTTCAAGTTTAAAG+AGG | + | chr3.1:65077210-65077229 | None:intergenic | 30.0% |
| !!! | GTTTTCAAGTTTAAAGAGGA+TGG | + | chr3.1:65077206-65077225 | None:intergenic | 30.0% |
| !!! | TTTTTTGAAAGGTAGGAACT+TGG | + | chr3.1:65077577-65077596 | None:intergenic | 30.0% |
| AAAAAGAAGTCTGTTCTGGT+AGG | - | chr3.1:65074968-65074987 | MS.gene79917:CDS | 35.0% | |
| AAAAGAAGTCTGTTCTGGTA+GGG | - | chr3.1:65074969-65074988 | MS.gene79917:CDS | 35.0% | |
| AATAGGAATCGCATTCAAGA+CGG | - | chr3.1:65076818-65076837 | MS.gene79917:intron | 35.0% | |
| AATCCAATGAGAGTTCCTTT+GGG | + | chr3.1:65076745-65076764 | None:intergenic | 35.0% | |
| AATCTCATCGCGTGTTAATT+TGG | + | chr3.1:65075963-65075982 | None:intergenic | 35.0% | |
| AGGGGGAAGGAAAATTAATT+GGG | + | chr3.1:65076713-65076732 | None:intergenic | 35.0% | |
| AGTATGTCTATCCTTGTGAA+TGG | + | chr3.1:65077363-65077382 | None:intergenic | 35.0% | |
| ATTTGAGTCTTCTTGCGAAA+TGG | + | chr3.1:65076621-65076640 | None:intergenic | 35.0% | |
| CAACTCTAAGTACGAAATTG+TGG | + | chr3.1:65078125-65078144 | None:intergenic | 35.0% | |
| CACTCATAAAACATACACGT+CGG | - | chr3.1:65075554-65075573 | MS.gene79917:intron | 35.0% | |
| GAAGAGATGCAAAGAAGATT+CGG | - | chr3.1:65075877-65075896 | MS.gene79917:intron | 35.0% | |
| GGAAAATTAATTGGGTGAGT+TGG | + | chr3.1:65076705-65076724 | None:intergenic | 35.0% | |
| GGAAAGATATGGTGTAAAGA+TGG | + | chr3.1:65076548-65076567 | None:intergenic | 35.0% | |
| GTAGAAATTAATCTTCAGCC+TGG | - | chr3.1:65077070-65077089 | MS.gene79917:intron | 35.0% | |
| GTTGTGTTTGCTTGTATTTG+AGG | + | chr3.1:65075263-65075282 | None:intergenic | 35.0% | |
| TAAATGGATAGAGTGGATGA+AGG | + | chr3.1:65077403-65077422 | None:intergenic | 35.0% | |
| TAATGACATGACCAAAAGAC+TGG | + | chr3.1:65077987-65078006 | None:intergenic | 35.0% | |
| TAGTGGTTTAATGTCCAATG+CGG | + | chr3.1:65077250-65077269 | None:intergenic | 35.0% | |
| TATTGTCTCTGTGTATCTAC+AGG | - | chr3.1:65077712-65077731 | MS.gene79917:intron | 35.0% | |
| TGAATATTAATATCCCCCGT+TGG | - | chr3.1:65077333-65077352 | MS.gene79917:intron | 35.0% | |
| TGACAAAAAGAAGTCTGTTC+TGG | - | chr3.1:65074964-65074983 | MS.gene79917:CDS | 35.0% | |
| TGATTATATACCTCCGATTG+CGG | - | chr3.1:65077816-65077835 | MS.gene79917:intron | 35.0% | |
| TTTGTGCTAAATGGATAGAG+TGG | + | chr3.1:65077410-65077429 | None:intergenic | 35.0% | |
| ! | AAATTAATTGGGTGAGTTGG+AGG | + | chr3.1:65076702-65076721 | None:intergenic | 35.0% |
| ! | AATTAATTGGGTGAGTTGGA+GGG | + | chr3.1:65076701-65076720 | None:intergenic | 35.0% |
| ! | AGATAATTTGTGGACCTTGA+AGG | + | chr3.1:65077123-65077142 | None:intergenic | 35.0% |
| ! | AGTGCTATTGAAAGAGTCAA+TGG | - | chr3.1:65078090-65078109 | MS.gene79917:CDS | 35.0% |
| ! | ATGGATCTAGTACAAGCTTT+TGG | + | chr3.1:65076390-65076409 | None:intergenic | 35.0% |
| ! | CGCGTGTTAATTTGGAAAAA+CGG | + | chr3.1:65075955-65075974 | None:intergenic | 35.0% |
| ! | GAGAAGGACTTTATTTGTGT+GGG | + | chr3.1:65076235-65076254 | None:intergenic | 35.0% |
| ! | GGAGAATGATCACTTCTTTT+CGG | + | chr3.1:65076131-65076150 | None:intergenic | 35.0% |
| ! | GGTAATAATTGCGTTTGTTG+TGG | + | chr3.1:65075911-65075930 | None:intergenic | 35.0% |
| ! | GTGCTATTGAAAGAGTCAAT+GGG | - | chr3.1:65078091-65078110 | MS.gene79917:CDS | 35.0% |
| !! | AGGCTTATGATTTGGTAGAT+TGG | + | chr3.1:65077467-65077486 | None:intergenic | 35.0% |
| !! | CAAGAAGAATTCTTTTCAGG+TGG | - | chr3.1:65077909-65077928 | MS.gene79917:intron | 35.0% |
| !! | GAATTTTGGTGGTTCGAAAT+TGG | + | chr3.1:65075317-65075336 | None:intergenic | 35.0% |
| !! | GCTTATGATTTGGTAGATTG+GGG | + | chr3.1:65077465-65077484 | None:intergenic | 35.0% |
| !! | GCTTTTTGGTGTATATGATG+CGG | + | chr3.1:65077443-65077462 | None:intergenic | 35.0% |
| !! | GGCTTATGATTTGGTAGATT+GGG | + | chr3.1:65077466-65077485 | None:intergenic | 35.0% |
| !! | TCTTTTGAGGAATGTTCTAG+TGG | + | chr3.1:65076569-65076588 | None:intergenic | 35.0% |
| !!! | AATCGGCTTTTTTGAAAGGT+AGG | + | chr3.1:65077584-65077603 | None:intergenic | 35.0% |
| !!! | TCCCCAAGAGAACAATTTTT+TGG | - | chr3.1:65076884-65076903 | MS.gene79917:intron | 35.0% |
| !!! | TTTGCTAAGGGGTTTTGAAT+TGG | + | chr3.1:65077099-65077118 | None:intergenic | 35.0% |
| AAAGAAGTCTGTTCTGGTAG+GGG | - | chr3.1:65074970-65074989 | MS.gene79917:CDS | 40.0% | |
| AACCCTGATCTCCTTAAGTT+CGG | - | chr3.1:65075004-65075023 | MS.gene79917:CDS | 40.0% | |
| AACGGAGTTGTTAGGAGATT+TGG | + | chr3.1:65076199-65076218 | None:intergenic | 40.0% | |
| AATACCCATGTCTTTGTGGA+CGG | + | chr3.1:65075041-65075060 | None:intergenic | 40.0% | |
| ACATTATGACCAGAGCTTCT+TGG | + | chr3.1:65077775-65077794 | None:intergenic | 40.0% | |
| AGGAGTTAGGGATGTTTGTA+GGG | + | chr3.1:65076647-65076666 | None:intergenic | 40.0% | |
| AGGCAACGGTAGATAATTTG+TGG | + | chr3.1:65077133-65077152 | None:intergenic | 40.0% | |
| AGGCTATGATTCATGAGATG+TGG | + | chr3.1:65076294-65076313 | None:intergenic | 40.0% | |
| ATCCAATGAGAGTTCCTTTG+GGG | + | chr3.1:65076744-65076763 | None:intergenic | 40.0% | |
| ATTCATTGGGAATGTTGGAG+TGG | + | chr3.1:65075758-65075777 | None:intergenic | 40.0% | |
| CAAGTTTAAAGAGGATGGGA+AGG | + | chr3.1:65077201-65077220 | None:intergenic | 40.0% | |
| CACGTCATTTCCATAATCTC+TGG | - | chr3.1:65077017-65077036 | MS.gene79917:intron | 40.0% | |
| CATTCAAGACGGAATTAAGG+AGG | - | chr3.1:65076829-65076848 | MS.gene79917:intron | 40.0% | |
| CCACAAAGACATGGGTATTA+CGG | - | chr3.1:65075042-65075061 | MS.gene79917:CDS | 40.0% | |
| CCCCACACAAATAGTATCAT+CGG | - | chr3.1:65077154-65077173 | MS.gene79917:intron | 40.0% | |
| CCGATGATACTATTTGTGTG+GGG | + | chr3.1:65077157-65077176 | None:intergenic | 40.0% | |
| CTATGATTCATGAGATGTGG+AGG | + | chr3.1:65076291-65076310 | None:intergenic | 40.0% | |
| CTCTGTGTATCTACAGGTTT+CGG | - | chr3.1:65077718-65077737 | MS.gene79917:intron | 40.0% | |
| CTTTGTTAACTTTGCCACCA+GGG | - | chr3.1:65078056-65078075 | MS.gene79917:CDS | 40.0% | |
| GAAATTAATCTTCAGCCTGG+AGG | - | chr3.1:65077073-65077092 | MS.gene79917:intron | 40.0% | |
| GAATCCAATGAGAGTTCCTT+TGG | + | chr3.1:65076746-65076765 | None:intergenic | 40.0% | |
| GAGGGGGAAGGAAAATTAAT+TGG | + | chr3.1:65076714-65076733 | None:intergenic | 40.0% | |
| GAGTTGTTAGGAGATTTGGA+CGG | + | chr3.1:65076195-65076214 | None:intergenic | 40.0% | |
| GATTATATACCTCCGATTGC+GGG | - | chr3.1:65077817-65077836 | MS.gene79917:intron | 40.0% | |
| GCCGATGATACTATTTGTGT+GGG | + | chr3.1:65077158-65077177 | None:intergenic | 40.0% | |
| GGAAAAGCTGAAGCAAATCA+GGG | + | chr3.1:65077966-65077985 | None:intergenic | 40.0% | |
| GTCTTGATCAACAGCAACAT+CGG | + | chr3.1:65078013-65078032 | None:intergenic | 40.0% | |
| GTGCATCTCAATCTCTTTCA+AGG | + | chr3.1:65077228-65077247 | None:intergenic | 40.0% | |
| TACCACTTGGGATCCTTTAT+TGG | + | chr3.1:65076919-65076938 | None:intergenic | 40.0% | |
| TAGGAGTTAGGGATGTTTGT+AGG | + | chr3.1:65076648-65076667 | None:intergenic | 40.0% | |
| TAGTTTGATGGGGATTGATG+TGG | + | chr3.1:65077045-65077064 | None:intergenic | 40.0% | |
| TCGCATTCAAGACGGAATTA+AGG | - | chr3.1:65076826-65076845 | MS.gene79917:intron | 40.0% | |
| TGATACTATTTGTGTGGGGA+AGG | + | chr3.1:65077153-65077172 | None:intergenic | 40.0% | |
| TGCCGATGATACTATTTGTG+TGG | + | chr3.1:65077159-65077178 | None:intergenic | 40.0% | |
| TGGAAAAGCTGAAGCAAATC+AGG | + | chr3.1:65077967-65077986 | None:intergenic | 40.0% | |
| TGTAAAGATGGGTGAGTTGT+TGG | + | chr3.1:65076536-65076555 | None:intergenic | 40.0% | |
| TGTAACTTGGGAAGAGATTG+TGG | + | chr3.1:65075630-65075649 | None:intergenic | 40.0% | |
| TTCCAATAAAGGATCCCAAG+TGG | - | chr3.1:65076914-65076933 | MS.gene79917:intron | 40.0% | |
| TTCCGTCAAATTTGGAAGAC+CGG | + | chr3.1:65076034-65076053 | None:intergenic | 40.0% | |
| TTGTGGAAGAGATGACTACT+GGG | - | chr3.1:65077869-65077888 | MS.gene79917:intron | 40.0% | |
| TTTGAAAGGTAGGAACTTGG+CGG | + | chr3.1:65077574-65077593 | None:intergenic | 40.0% | |
| TTTGTGGAAGAGATGACTAC+TGG | - | chr3.1:65077868-65077887 | MS.gene79917:intron | 40.0% | |
| ! | ACCTTTCCTTTTCCTTTTGG+TGG | + | chr3.1:65077283-65077302 | None:intergenic | 40.0% |
| ! | AGCACCTTTCCTTTTCCTTT+TGG | + | chr3.1:65077286-65077305 | None:intergenic | 40.0% |
| ! | AGGTTTGTGTATGATTTGGG+AGG | + | chr3.1:65075708-65075727 | None:intergenic | 40.0% |
| ! | CGACGTGTATGTTTTATGAG+TGG | + | chr3.1:65075556-65075575 | None:intergenic | 40.0% |
| ! | CTTCAGCTTTTCCAGTCTTT+TGG | - | chr3.1:65077973-65077992 | MS.gene79917:intron | 40.0% |
| ! | GGAGAAGGACTTTATTTGTG+TGG | + | chr3.1:65076236-65076255 | None:intergenic | 40.0% |
| ! | GTATGTTTTATGAGTGGAGC+TGG | + | chr3.1:65075550-65075569 | None:intergenic | 40.0% |
| ! | TTTGGTAGATTGGGGCTTTT+TGG | + | chr3.1:65077457-65077476 | None:intergenic | 40.0% |
| ! | TTTGTGTATGATTTGGGAGG+CGG | + | chr3.1:65075705-65075724 | None:intergenic | 40.0% |
| !! | AGATTGGTTTAATGAGGAGG+TGG | + | chr3.1:65076428-65076447 | None:intergenic | 40.0% |
| !! | ATTTGGTGGTGCTCTCTAAA+GGG | + | chr3.1:65076465-65076484 | None:intergenic | 40.0% |
| !! | GAGTGGGTTTTTGTGCTAAA+TGG | + | chr3.1:65077419-65077438 | None:intergenic | 40.0% |
| !! | GGTGGGTTTTTAATTGGAGA+AGG | + | chr3.1:65076251-65076270 | None:intergenic | 40.0% |
| !! | TAGTACAAGCTTTTGGAGAG+TGG | + | chr3.1:65076383-65076402 | None:intergenic | 40.0% |
| !!! | AATTCTTTTCAGGTGGTCGT+AGG | - | chr3.1:65077916-65077935 | MS.gene79917:intron | 40.0% |
| !!! | ATCTTTTTTGCCACACAAGC+CGG | - | chr3.1:65076771-65076790 | MS.gene79917:intron | 40.0% |
| !!! | CTGTTTTTTGAGGAAGGTCT+GGG | + | chr3.1:65075388-65075407 | None:intergenic | 40.0% |
| !!! | TCTTTTGAGGCAGTTTTGCT+GGG | + | chr3.1:65075364-65075383 | None:intergenic | 40.0% |
| !!! | TGTTTTTTGAGGAAGGTCTG+GGG | + | chr3.1:65075387-65075406 | None:intergenic | 40.0% |
| !!! | TTGTGCAAGGCTGTTTTTTG+AGG | + | chr3.1:65075398-65075417 | None:intergenic | 40.0% |
| AAACATACACGTCGGAGTTG+TGG | - | chr3.1:65075562-65075581 | MS.gene79917:intron | 45.0% | |
| AAAGATGGGTGAGTTGTTGG+AGG | + | chr3.1:65076533-65076552 | None:intergenic | 45.0% | |
| AACTTGGGAAGAGATTGTGG+AGG | + | chr3.1:65075627-65075646 | None:intergenic | 45.0% | |
| AAGCAAACACAACACCTCCA+AGG | - | chr3.1:65075270-65075289 | MS.gene79917:CDS | 45.0% | |
| AAGTTGGAGGTCTAGGAGTT+AGG | + | chr3.1:65076660-65076679 | None:intergenic | 45.0% | |
| ACAAAAGCCTTCAGGTATGG+AGG | + | chr3.1:65077853-65077872 | None:intergenic | 45.0% | |
| ACCCTGATCTCCTTAAGTTC+GGG | - | chr3.1:65075005-65075024 | MS.gene79917:CDS | 45.0% | |
| ACCTTGAAGGCTTTGCTAAG+GGG | + | chr3.1:65077110-65077129 | None:intergenic | 45.0% | |
| AGATGTGGAGGCCAAATTCA+AGG | + | chr3.1:65076279-65076298 | None:intergenic | 45.0% | |
| AGATTCTTGGAGGTGGAAGT+TGG | + | chr3.1:65076152-65076171 | None:intergenic | 45.0% | |
| AGGAGATTTGGACGGTTTGT+GGG | + | chr3.1:65076187-65076206 | None:intergenic | 45.0% | |
| AGGAGGTGAAGGTTATGACT+TGG | + | chr3.1:65075607-65075626 | None:intergenic | 45.0% | |
| AGGTTGAAGATTCTTGGAGG+TGG | + | chr3.1:65076159-65076178 | None:intergenic | 45.0% | |
| AGTTGGAGGTCTAGGAGTTA+GGG | + | chr3.1:65076659-65076678 | None:intergenic | 45.0% | |
| ATGAAGGCTTATGTGTGTGG+AGG | + | chr3.1:65077387-65077406 | None:intergenic | 45.0% | |
| ATTGGGAATGTTGGAGTGGA+GGG | + | chr3.1:65075754-65075773 | None:intergenic | 45.0% | |
| CCGTAATACCCATGTCTTTG+TGG | + | chr3.1:65075045-65075064 | None:intergenic | 45.0% | |
| CCTTGTGAATGGAAGTCCAA+CGG | + | chr3.1:65077352-65077371 | None:intergenic | 45.0% | |
| CTAGACCAGAAAACAGCAAG+AGG | - | chr3.1:65075484-65075503 | MS.gene79917:intron | 45.0% | |
| CTCCGGTCTTCCAAATTTGA+CGG | - | chr3.1:65076029-65076048 | MS.gene79917:intron | 45.0% | |
| CTGAGGTTGAAGATTCTTGG+AGG | + | chr3.1:65076162-65076181 | None:intergenic | 45.0% | |
| CTTGTGAATGGAAGTCCAAC+GGG | + | chr3.1:65077351-65077370 | None:intergenic | 45.0% | |
| GACCTTGAAGGCTTTGCTAA+GGG | + | chr3.1:65077111-65077130 | None:intergenic | 45.0% | |
| GCAACAAAGATGCCGCATAT+AGG | - | chr3.1:65075187-65075206 | MS.gene79917:CDS | 45.0% | |
| GCCACCAAAAGGAAAAGGAA+AGG | - | chr3.1:65077279-65077298 | MS.gene79917:intron | 45.0% | |
| GGACTGAGGTTGAAGATTCT+TGG | + | chr3.1:65076165-65076184 | None:intergenic | 45.0% | |
| GGAGGTTGTTCCGTCAAATT+TGG | + | chr3.1:65076042-65076061 | None:intergenic | 45.0% | |
| GGCAAGCCCAAATACATGAA+CGG | - | chr3.1:65076963-65076982 | MS.gene79917:intron | 45.0% | |
| GGTACAAACATACCCGCAAT+CGG | + | chr3.1:65077832-65077851 | None:intergenic | 45.0% | |
| GGTGATGTAACGCCTATATG+CGG | + | chr3.1:65075202-65075221 | None:intergenic | 45.0% | |
| GTGTATATGATGCGGAGAGT+GGG | + | chr3.1:65077435-65077454 | None:intergenic | 45.0% | |
| GTGTGTCAACCTAGAGAAGT+TGG | + | chr3.1:65076676-65076695 | None:intergenic | 45.0% | |
| GTTCATGTATTTGGGCTTGC+CGG | + | chr3.1:65076964-65076983 | None:intergenic | 45.0% | |
| GTTTGTACCTCCATACCTGA+AGG | - | chr3.1:65077843-65077862 | MS.gene79917:intron | 45.0% | |
| TAAAACCTTCGGCCACCAAA+AGG | - | chr3.1:65077268-65077287 | MS.gene79917:intron | 45.0% | |
| TAGGAGATTTGGACGGTTTG+TGG | + | chr3.1:65076188-65076207 | None:intergenic | 45.0% | |
| TATGCCGTCCACAAAGACAT+GGG | - | chr3.1:65075034-65075053 | MS.gene79917:CDS | 45.0% | |
| TATTTGTGTGGGGAAGGCAA+CGG | + | chr3.1:65077147-65077166 | None:intergenic | 45.0% | |
| TCCACAAAAGCCTTCAGGTA+TGG | + | chr3.1:65077856-65077875 | None:intergenic | 45.0% | |
| TCCTACATTGTGACTTCGCA+AGG | + | chr3.1:65075859-65075878 | None:intergenic | 45.0% | |
| TCCTTGCGAAGTCACAATGT+AGG | - | chr3.1:65075855-65075874 | MS.gene79917:intron | 45.0% | |
| TCGAATGCAAACCACCATGA+GGG | + | chr3.1:65075100-65075119 | None:intergenic | 45.0% | |
| TCTCTTCCACAAAAGCCTTC+AGG | + | chr3.1:65077861-65077880 | None:intergenic | 45.0% | |
| TGAGTCTTCTTGCGAAATGG+AGG | + | chr3.1:65076618-65076637 | None:intergenic | 45.0% | |
| TGGAGGCCAAATTCAAGGAA+GGG | + | chr3.1:65076274-65076293 | None:intergenic | 45.0% | |
| TGGATGAAGGCTTATGTGTG+TGG | + | chr3.1:65077390-65077409 | None:intergenic | 45.0% | |
| TGTCAACCTAGAGAAGTTGG+AGG | + | chr3.1:65076673-65076692 | None:intergenic | 45.0% | |
| TTCGAAATTGGAAGGGAGAG+AGG | + | chr3.1:65076095-65076114 | None:intergenic | 45.0% | |
| TTGTGAATGGAAGTCCAACG+GGG | + | chr3.1:65077350-65077369 | None:intergenic | 45.0% | |
| ! | AGGTGAAGGTTATGACTTGG+AGG | + | chr3.1:65075604-65075623 | None:intergenic | 45.0% |
| ! | ATTGGAAGGGAGAGAGGTTT+TGG | + | chr3.1:65076089-65076108 | None:intergenic | 45.0% |
| ! | CCAAGGTGAGTGCTTTTGTT+TGG | + | chr3.1:65076003-65076022 | None:intergenic | 45.0% |
| ! | CGTGCTATGGGGTTGAATTT+TGG | + | chr3.1:65075331-65075350 | None:intergenic | 45.0% |
| ! | CTTTTTGTCATCGGATGACC+CGG | + | chr3.1:65074954-65074973 | None:intergenic | 45.0% |
| ! | GCTATGGGGTTGAATTTTGG+TGG | + | chr3.1:65075328-65075347 | None:intergenic | 45.0% |
| ! | GCTTTGTTAACTTTGCCACC+AGG | - | chr3.1:65078055-65078074 | MS.gene79917:CDS | 45.0% |
| ! | GTTGCTGTTGATCAAGACTC+TGG | - | chr3.1:65078015-65078034 | MS.gene79917:CDS | 45.0% |
| ! | TCCATACCTGAAGGCTTTTG+TGG | - | chr3.1:65077852-65077871 | MS.gene79917:intron | 45.0% |
| ! | TGAAGGTTATGACTTGGAGG+TGG | + | chr3.1:65075601-65075620 | None:intergenic | 45.0% |
| ! | TTGTGTATGATTTGGGAGGC+GGG | + | chr3.1:65075704-65075723 | None:intergenic | 45.0% |
| ! | TTTGGGTGTTATCGAAAGCG+AGG | + | chr3.1:65075679-65075698 | None:intergenic | 45.0% |
| !! | ACAAAAGCACTCACCTTGGA+AGG | - | chr3.1:65076004-65076023 | MS.gene79917:intron | 45.0% |
| !! | AGGAAAAGGAAAGGTGCTAG+AGG | - | chr3.1:65077288-65077307 | MS.gene79917:intron | 45.0% |
| !! | ATCGAGGTGGTGGAAAGATT+TGG | + | chr3.1:65076482-65076501 | None:intergenic | 45.0% |
| !! | CCAAACAAAAGCACTCACCT+TGG | - | chr3.1:65076000-65076019 | MS.gene79917:intron | 45.0% |
| !! | CTTTATAATGCCGGCTTGTG+TGG | + | chr3.1:65076784-65076803 | None:intergenic | 45.0% |
| !! | GAAGGGGGTGGGTTTTTAAT+TGG | + | chr3.1:65076257-65076276 | None:intergenic | 45.0% |
| !! | GATTTGGTGGTGCTCTCTAA+AGG | + | chr3.1:65076466-65076485 | None:intergenic | 45.0% |
| !! | GGCAGATTGGTTTAATGAGG+AGG | + | chr3.1:65076431-65076450 | None:intergenic | 45.0% |
| !! | GGTGAGTGCTTTTGTTTGGA+AGG | + | chr3.1:65075999-65076018 | None:intergenic | 45.0% |
| !! | TGGAGGACATTGTCGATTTG+TGG | + | chr3.1:65076516-65076535 | None:intergenic | 45.0% |
| !! | TTGCGTTTGTTGTGGGAAGT+TGG | + | chr3.1:65075903-65075922 | None:intergenic | 45.0% |
| !! | TTTGGTGGTGCTCTCTAAAG+GGG | + | chr3.1:65076464-65076483 | None:intergenic | 45.0% |
| !!! | CTTGCTGTTTTCTGGTCTAG+CGG | + | chr3.1:65075484-65075503 | None:intergenic | 45.0% |
| !!! | GCAAGGCTGTTTTTTGAGGA+AGG | + | chr3.1:65075394-65075413 | None:intergenic | 45.0% |
| !!! | GCTGTTTTTTGAGGAAGGTC+TGG | + | chr3.1:65075389-65075408 | None:intergenic | 45.0% |
| !!! | GTCTTTTGAGGCAGTTTTGC+TGG | + | chr3.1:65075365-65075384 | None:intergenic | 45.0% |
| !! | CAAAAAATAAAAATAAAAAT+TGG | + | chr3.1:65075162-65075181 | None:intergenic | 5.0% |
| !!! | TTTATTTTTATTTTTTGAAT+CGG | - | chr3.1:65075165-65075184 | MS.gene79917:CDS | 5.0% |
| AAAGGTAGGAACTTGGCGGA+TGG | + | chr3.1:65077570-65077589 | None:intergenic | 50.0% | |
| ACAAACATACCCGCAATCGG+AGG | + | chr3.1:65077829-65077848 | None:intergenic | 50.0% | |
| ACAACACAGCAACAGCCAAC+AGG | - | chr3.1:65075414-65075433 | MS.gene79917:intron | 50.0% | |
| ACCCCTTAGCAAAGCCTTCA+AGG | - | chr3.1:65077106-65077125 | MS.gene79917:intron | 50.0% | |
| AGAGATTGTGGAGGAGGTGA+AGG | + | chr3.1:65075618-65075637 | None:intergenic | 50.0% | |
| ATCTACAGGTTTCGGCAACG+AGG | - | chr3.1:65077726-65077745 | MS.gene79917:intron | 50.0% | |
| ATGTATTTGGGCTTGCCGGT+GGG | + | chr3.1:65076960-65076979 | None:intergenic | 50.0% | |
| CAAACCACCATGAGGGATCA+CGG | + | chr3.1:65075093-65075112 | None:intergenic | 50.0% | |
| CACCCCAAAGGAACTCTCAT+TGG | - | chr3.1:65076739-65076758 | MS.gene79917:intron | 50.0% | |
| CACGCGATGAGATTCGATCA+AGG | - | chr3.1:65075969-65075988 | MS.gene79917:intron | 50.0% | |
| CAGGGTTCCTTGTCTCGTAT+GGG | + | chr3.1:65077948-65077967 | None:intergenic | 50.0% | |
| CATAGCTGTCCCCGAACTTA+AGG | + | chr3.1:65075018-65075037 | None:intergenic | 50.0% | |
| CATTGGGAATGTTGGAGTGG+AGG | + | chr3.1:65075755-65075774 | None:intergenic | 50.0% | |
| CCAAATTCAAGGAAGGGGGT+GGG | + | chr3.1:65076268-65076287 | None:intergenic | 50.0% | |
| CCCCGAACTTAAGGAGATCA+GGG | + | chr3.1:65075009-65075028 | None:intergenic | 50.0% | |
| CCCTGATCTCCTTAAGTTCG+GGG | - | chr3.1:65075006-65075025 | MS.gene79917:CDS | 50.0% | |
| CCGTTGGACTTCCATTCACA+AGG | - | chr3.1:65077349-65077368 | MS.gene79917:intron | 50.0% | |
| CCTAGACCTCCAACTTCTCT+AGG | - | chr3.1:65076664-65076683 | MS.gene79917:intron | 50.0% | |
| CCTAGAGAAGTTGGAGGTCT+AGG | + | chr3.1:65076667-65076686 | None:intergenic | 50.0% | |
| CTATGCCGTCCACAAAGACA+TGG | - | chr3.1:65075033-65075052 | MS.gene79917:CDS | 50.0% | |
| CTTCGGCCACCAAAAGGAAA+AGG | - | chr3.1:65077274-65077293 | MS.gene79917:intron | 50.0% | |
| GACCAGAAAACAGCAAGAGG+AGG | - | chr3.1:65075487-65075506 | MS.gene79917:intron | 50.0% | |
| GAGATTGAGATGCACCGCAT+TGG | - | chr3.1:65077233-65077252 | MS.gene79917:intron | 50.0% | |
| GAGGCCAAATTCAAGGAAGG+GGG | + | chr3.1:65076272-65076291 | None:intergenic | 50.0% | |
| GATTTGGGAGGCGGGAATTT+GGG | + | chr3.1:65075696-65075715 | None:intergenic | 50.0% | |
| GGACCTTGAAGGCTTTGCTA+AGG | + | chr3.1:65077112-65077131 | None:intergenic | 50.0% | |
| GGAGATTTGGACGGTTTGTG+GGG | + | chr3.1:65076186-65076205 | None:intergenic | 50.0% | |
| GGAGGCCAAATTCAAGGAAG+GGG | + | chr3.1:65076273-65076292 | None:intergenic | 50.0% | |
| GGTGTATATGATGCGGAGAG+TGG | + | chr3.1:65077436-65077455 | None:intergenic | 50.0% | |
| GTCGAATGCAAACCACCATG+AGG | + | chr3.1:65075101-65075120 | None:intergenic | 50.0% | |
| GTCTTCTTGCGAAATGGAGG+TGG | + | chr3.1:65076615-65076634 | None:intergenic | 50.0% | |
| GTGGAGGCCAAATTCAAGGA+AGG | + | chr3.1:65076275-65076294 | None:intergenic | 50.0% | |
| TCAGGGTTCCTTGTCTCGTA+TGG | + | chr3.1:65077949-65077968 | None:intergenic | 50.0% | |
| TCCCCGAACTTAAGGAGATC+AGG | + | chr3.1:65075010-65075029 | None:intergenic | 50.0% | |
| TGATGTGGCGCCAGAGATTA+TGG | + | chr3.1:65077030-65077049 | None:intergenic | 50.0% | |
| TGTGAATGGAAGTCCAACGG+GGG | + | chr3.1:65077349-65077368 | None:intergenic | 50.0% | |
| TTCTTGCGAAATGGAGGTGG+AGG | + | chr3.1:65076612-65076631 | None:intergenic | 50.0% | |
| TTGGGAAGAGATTGTGGAGG+AGG | + | chr3.1:65075624-65075643 | None:intergenic | 50.0% | |
| ! | AAGGTAGGAACTTGGCGGAT+GGG | + | chr3.1:65077569-65077588 | None:intergenic | 50.0% |
| ! | CAATGAGAGTTCCTTTGGGG+TGG | + | chr3.1:65076741-65076760 | None:intergenic | 50.0% |
| ! | TGATTTGGGAGGCGGGAATT+TGG | + | chr3.1:65075697-65075716 | None:intergenic | 50.0% |
| !! | ACATTGTCGATTTGTGGCCG+AGG | + | chr3.1:65076510-65076529 | None:intergenic | 50.0% |
| !! | AGAGTTCCTTTGGGGTGGAA+TGG | + | chr3.1:65076736-65076755 | None:intergenic | 50.0% |
| !! | CAAGCTTTTGGAGAGTGGCA+TGG | + | chr3.1:65076378-65076397 | None:intergenic | 50.0% |
| !! | CTTTTCCTTTTGGTGGCCGA+AGG | + | chr3.1:65077276-65077295 | None:intergenic | 50.0% |
| !! | GAGGTGGTGGAAAGATTTGG+TGG | + | chr3.1:65076479-65076498 | None:intergenic | 50.0% |
| !! | GGGGGCAGATTGGTTTAATG+AGG | + | chr3.1:65076434-65076453 | None:intergenic | 50.0% |
| !! | GTTTTCTGGTCTAGCGGTAC+AGG | + | chr3.1:65075478-65075497 | None:intergenic | 50.0% |
| !! | TTCCTTTGGGGTGGAATGGA+GGG | + | chr3.1:65076732-65076751 | None:intergenic | 50.0% |
| !! | TTGGTGGCCGAAGGTTTTAG+TGG | + | chr3.1:65077267-65077286 | None:intergenic | 50.0% |
| !! | TTTTGGAGAGTGGCATGGAG+AGG | + | chr3.1:65076373-65076392 | None:intergenic | 50.0% |
| !!! | TGCCTCCTCTTGCTGTTTTC+TGG | + | chr3.1:65075492-65075511 | None:intergenic | 50.0% |
| AACAACCTCCTCTCCCCTAC+CGG | - | chr3.1:65076052-65076071 | MS.gene79917:intron | 55.0% | |
| ACTCACCTTGGAAGGAGCTC+CGG | - | chr3.1:65076012-65076031 | MS.gene79917:intron | 55.0% | |
| AGCCATAGCTCAAGCCTTGG+AGG | + | chr3.1:65075287-65075306 | None:intergenic | 55.0% | |
| ATGAGTGGAGCTGGAGTCCA+CGG | + | chr3.1:65075541-65075560 | None:intergenic | 55.0% | |
| ATGTCCGTGATCCCTCATGG+TGG | - | chr3.1:65075086-65075105 | MS.gene79917:CDS | 55.0% | |
| CACCACCTCGATGCATTCCT+CGG | - | chr3.1:65076490-65076509 | MS.gene79917:intron | 55.0% | |
| CACCTCCAAGGCTTGAGCTA+TGG | - | chr3.1:65075282-65075301 | MS.gene79917:CDS | 55.0% | |
| CAGAGCCATAGCTCAAGCCT+TGG | + | chr3.1:65075290-65075309 | None:intergenic | 55.0% | |
| CATGACAGTCCAGCACCTGT+TGG | + | chr3.1:65075432-65075451 | None:intergenic | 55.0% | |
| CATGAGGGATCACGGACATG+AGG | + | chr3.1:65075085-65075104 | None:intergenic | 55.0% | |
| CATGTATTTGGGCTTGCCGG+TGG | + | chr3.1:65076961-65076980 | None:intergenic | 55.0% | |
| CCCACCCCCTTCCTTGAATT+TGG | - | chr3.1:65076265-65076284 | MS.gene79917:intron | 55.0% | |
| CGGGATTGCTTAGCGCGTTA+AGG | + | chr3.1:65075521-65075540 | None:intergenic | 55.0% | |
| CTCATGTCCGTGATCCCTCA+TGG | - | chr3.1:65075083-65075102 | MS.gene79917:CDS | 55.0% | |
| GACCAGAGCTTCTTGGACGA+GGG | + | chr3.1:65077768-65077787 | None:intergenic | 55.0% | |
| GCAACCTCCCATACGAGACA+AGG | - | chr3.1:65077938-65077957 | MS.gene79917:intron | 55.0% | |
| GCCAAATTCAAGGAAGGGGG+TGG | + | chr3.1:65076269-65076288 | None:intergenic | 55.0% | |
| GGCTGTTGCTGTGTTGTGCA+AGG | + | chr3.1:65075411-65075430 | None:intergenic | 55.0% | |
| GGTTCCTTGTCTCGTATGGG+AGG | + | chr3.1:65077945-65077964 | None:intergenic | 55.0% | |
| TAACGCGCTAAGCAATCCCG+TGG | - | chr3.1:65075521-65075540 | MS.gene79917:intron | 55.0% | |
| TGACCAGAGCTTCTTGGACG+AGG | + | chr3.1:65077769-65077788 | None:intergenic | 55.0% | |
| TTCCCTCGTCCAAGAAGCTC+TGG | - | chr3.1:65077763-65077782 | MS.gene79917:intron | 55.0% | |
| ! | AGGCAGTTTTGCTGGGCTGT+TGG | + | chr3.1:65075357-65075376 | None:intergenic | 55.0% |
| ! | AGGTAGGAACTTGGCGGATG+GGG | + | chr3.1:65077568-65077587 | None:intergenic | 55.0% |
| ! | CAGTTTTGCTGGGCTGTTGG+AGG | + | chr3.1:65075354-65075373 | None:intergenic | 55.0% |
| ! | TCTGGCTGTAGTGCCCGTTT+TGG | - | chr3.1:65078033-65078052 | MS.gene79917:CDS | 55.0% |
| ! | TGGTGCTCTCTAAAGGGGCA+GGG | + | chr3.1:65076459-65076478 | None:intergenic | 55.0% |
| !! | GAACTTGGCGGATGGGGTTT+TGG | + | chr3.1:65077562-65077581 | None:intergenic | 55.0% |
| !! | GGAAGGGAGAGAGGTTTTGG+AGG | + | chr3.1:65076086-65076105 | None:intergenic | 55.0% |
| !! | GGAAGGTCTGGGGTCTTTTG+AGG | + | chr3.1:65075377-65075396 | None:intergenic | 55.0% |
| !! | GTTCCTTTGGGGTGGAATGG+AGG | + | chr3.1:65076733-65076752 | None:intergenic | 55.0% |
| !! | TCCTTTGGGGTGGAATGGAG+GGG | + | chr3.1:65076731-65076750 | None:intergenic | 55.0% |
| !!! | GGGGTTTTGAATTGGCCTCC+AGG | + | chr3.1:65077091-65077110 | None:intergenic | 55.0% |
| !!! | GGTTTTGGAGGTTACCCGTC+CGG | + | chr3.1:65076074-65076093 | None:intergenic | 55.0% |
| ACTCTGAGCAGCTTCCCTGG+TGG | + | chr3.1:65078073-65078092 | None:intergenic | 60.0% | |
| AGCACTCTGAGCAGCTTCCC+TGG | + | chr3.1:65078076-65078095 | None:intergenic | 60.0% | |
| AGGAGGTGGTTCGTAGCGTG+GGG | + | chr3.1:65076414-65076433 | None:intergenic | 60.0% | |
| ATTTGGGCTTGCCGGTGGGT+GGG | + | chr3.1:65076956-65076975 | None:intergenic | 60.0% | |
| CAGCAACAGCCAACAGGTGC+TGG | - | chr3.1:65075420-65075439 | MS.gene79917:intron | 60.0% | |
| CGAGGAATGCATCGAGGTGG+TGG | + | chr3.1:65076492-65076511 | None:intergenic | 60.0% | |
| GAAGACCGGAGCTCCTTCCA+AGG | + | chr3.1:65076020-65076039 | None:intergenic | 60.0% | |
| GAGGAGGTGGTTCGTAGCGT+GGG | + | chr3.1:65076415-65076434 | None:intergenic | 60.0% | |
| GTGGTTCGTAGCGTGGGGAA+TGG | + | chr3.1:65076409-65076428 | None:intergenic | 60.0% | |
| TAGCGGTACAGGCTGTCCAC+TGG | + | chr3.1:65075467-65075486 | None:intergenic | 60.0% | |
| TATTTGGGCTTGCCGGTGGG+TGG | + | chr3.1:65076957-65076976 | None:intergenic | 60.0% | |
| TCCCAAGTGGTAGCCCTAGC+CGG | - | chr3.1:65076927-65076946 | MS.gene79917:intron | 60.0% | |
| TGAGGAGGTGGTTCGTAGCG+TGG | + | chr3.1:65076416-65076435 | None:intergenic | 60.0% | |
| TGAGTGGAGCTGGAGTCCAC+GGG | + | chr3.1:65075540-65075559 | None:intergenic | 60.0% | |
| TGGACGGTTTGTGGGGACTG+AGG | + | chr3.1:65076179-65076198 | None:intergenic | 60.0% | |
| TGGAGGTTACCCGTCCGGTA+GGG | + | chr3.1:65076069-65076088 | None:intergenic | 60.0% | |
| TGTGGCCGAGGAATGCATCG+AGG | + | chr3.1:65076498-65076517 | None:intergenic | 60.0% | |
| TTGGAGGTTACCCGTCCGGT+AGG | + | chr3.1:65076070-65076089 | None:intergenic | 60.0% | |
| ! | GCTGTTGGAGGCGTGCTATG+GGG | + | chr3.1:65075342-65075361 | None:intergenic | 60.0% |
| ! | GGCTGTTGGAGGCGTGCTAT+GGG | + | chr3.1:65075343-65075362 | None:intergenic | 60.0% |
| ! | GGTGCTCTCTAAAGGGGCAG+GGG | + | chr3.1:65076458-65076477 | None:intergenic | 60.0% |
| ! | GTGGTGCTCTCTAAAGGGGC+AGG | + | chr3.1:65076460-65076479 | None:intergenic | 60.0% |
| !! | CCTTTGGGGTGGAATGGAGG+GGG | + | chr3.1:65076730-65076749 | None:intergenic | 60.0% |
| ACCCGGCTAGGGCTACCACT+TGG | + | chr3.1:65076932-65076951 | None:intergenic | 65.0% | |
| ACCTCCTCTCCCCTACCGGA+CGG | - | chr3.1:65076056-65076075 | MS.gene79917:intron | 65.0% | |
| CATGACAGCAGCGCTGCCAG+TGG | - | chr3.1:65075448-65075467 | MS.gene79917:intron | 65.0% | |
| CCCAAGTGGTAGCCCTAGCC+GGG | - | chr3.1:65076928-65076947 | MS.gene79917:intron | 65.0% | |
| CCCCCTCCATTCCACCCCAA+AGG | - | chr3.1:65076727-65076746 | MS.gene79917:intron | 65.0% | |
| CCCGGCTAGGGCTACCACTT+GGG | + | chr3.1:65076931-65076950 | None:intergenic | 65.0% | |
| GGAGGTTACCCGTCCGGTAG+GGG | + | chr3.1:65076068-65076087 | None:intergenic | 65.0% | |
| GGCCGAGGAATGCATCGAGG+TGG | + | chr3.1:65076495-65076514 | None:intergenic | 65.0% | |
| TGGGGTGGAATGGAGGGGGA+AGG | + | chr3.1:65076726-65076745 | None:intergenic | 65.0% | |
| TTACCCGTCCGGTAGGGGAG+AGG | + | chr3.1:65076063-65076082 | None:intergenic | 65.0% | |
| ! | CTCTCTAAAGGGGCAGGGGC+GGG | + | chr3.1:65076454-65076473 | None:intergenic | 65.0% |
| ! | GCTCTCTAAAGGGGCAGGGG+CGG | + | chr3.1:65076455-65076474 | None:intergenic | 65.0% |
| ! | GGGCTGTTGGAGGCGTGCTA+TGG | + | chr3.1:65075344-65075363 | None:intergenic | 65.0% |
| ! | TCTCTAAAGGGGCAGGGGCG+GGG | + | chr3.1:65076453-65076472 | None:intergenic | 65.0% |
| CCTCCTCTCCCCTACCGGAC+GGG | - | chr3.1:65076057-65076076 | MS.gene79917:intron | 70.0% | |
| CTAGCCGGGTTCCCACCCAC+CGG | - | chr3.1:65076942-65076961 | MS.gene79917:intron | 70.0% | |
| CTTGCCGGTGGGTGGGAACC+CGG | + | chr3.1:65076949-65076968 | None:intergenic | 70.0% | |
| GGTGGGTGGGAACCCGGCTA+GGG | + | chr3.1:65076943-65076962 | None:intergenic | 70.0% | |
| ! | CTCTAAAGGGGCAGGGGCGG+GGG | + | chr3.1:65076452-65076471 | None:intergenic | 70.0% |
| CCCGTCCGGTAGGGGAGAGG+AGG | + | chr3.1:65076060-65076079 | None:intergenic | 75.0% | |
| CGGTGGGTGGGAACCCGGCT+AGG | + | chr3.1:65076944-65076963 | None:intergenic | 75.0% | |
| ! | GGGCAGGGGCGGGGGCAGAT+TGG | + | chr3.1:65076444-65076463 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 65074944 | 65078170 | 65074944 | ID=MS.gene79917 |
| chr3.1 | mRNA | 65074944 | 65078170 | 65074944 | ID=MS.gene79917.t1;Parent=MS.gene79917 |
| chr3.1 | exon | 65077993 | 65078170 | 65077993 | ID=MS.gene79917.t1.exon1;Parent=MS.gene79917.t1 |
| chr3.1 | CDS | 65077993 | 65078170 | 65077993 | ID=cds.MS.gene79917.t1;Parent=MS.gene79917.t1 |
| chr3.1 | exon | 65074944 | 65075380 | 65074944 | ID=MS.gene79917.t1.exon2;Parent=MS.gene79917.t1 |
| chr3.1 | CDS | 65074944 | 65075380 | 65074944 | ID=cds.MS.gene79917.t1;Parent=MS.gene79917.t1 |
| Gene Sequence |
| Protein sequence |
