AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene060634


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060634.t1 MTR_2g078010 98.693 153 2 0 1 153 1 153 7.31e-111 311
MS.gene060634.t1 MTR_2g078010 90.419 167 2 1 1 153 1 167 7.88e-107 301
MS.gene060634.t1 MTR_2g078010 97.887 142 3 0 1 142 1 142 2.05e-101 287
MS.gene060634.t1 MTR_2g078010 98.148 108 2 0 1 108 1 108 1.12e-75 221
MS.gene060634.t1 MTR_5g075580 49.655 145 73 0 8 152 4 148 3.47e-48 152
MS.gene060634.t1 MTR_8g071040 49.655 145 73 0 8 152 4 148 5.92e-48 152
MS.gene060634.t1 MTR_3g062450 48.966 145 74 0 8 152 4 148 1.50e-47 151
MS.gene060634.t1 MTR_7g116940 48.966 145 74 0 8 152 4 148 2.17e-47 150
MS.gene060634.t1 MTR_1g021150 48.252 143 74 0 8 150 4 146 1.22e-46 149
MS.gene060634.t1 MTR_4g073240 47.586 145 76 0 8 152 4 148 2.48e-46 148
MS.gene060634.t1 MTR_7g116940 46.711 152 74 1 8 152 4 155 1.51e-44 144
MS.gene060634.t1 MTR_5g075580 52.941 119 56 0 34 152 1 119 6.89e-42 135
MS.gene060634.t1 MTR_1g021150 50.000 124 62 0 27 150 31 154 1.02e-41 136
MS.gene060634.t1 MTR_3g098780 50.000 128 63 1 24 150 22 149 2.72e-40 134
MS.gene060634.t1 MTR_3g098780 50.000 128 63 1 24 150 46 173 4.97e-40 134
MS.gene060634.t1 MTR_4g073240 50.420 119 59 0 34 152 1 119 6.41e-40 130
MS.gene060634.t1 MTR_4g108080 40.146 137 82 0 8 144 7 143 3.15e-38 127
MS.gene060634.t1 MTR_8g468530 40.146 137 82 0 8 144 23 159 5.97e-38 127
MS.gene060634.t1 MTR_4g076200 46.094 128 69 0 8 135 35 162 1.34e-35 122
MS.gene060634.t1 MTR_5g009020 46.094 128 69 0 8 135 35 162 1.58e-35 121
MS.gene060634.t1 MTR_8g085690 39.860 143 86 0 8 150 25 167 4.77e-35 120
MS.gene060634.t1 MTR_4g076200 47.899 119 62 0 17 135 3 121 7.95e-35 118
MS.gene060634.t1 MTR_3g110110 40.411 146 83 3 9 150 7 152 1.67e-33 115
MS.gene060634.t1 MTR_1g095510 43.609 133 74 1 4 135 40 172 9.10e-32 112
MS.gene060634.t1 MTR_4g108080 42.593 108 62 0 8 115 7 114 9.38e-32 110
MS.gene060634.t1 MTR_1g095510 47.321 112 59 0 24 135 7 118 1.15e-31 110
MS.gene060634.t1 MTR_7g116940 47.170 106 56 0 8 113 4 109 9.63e-31 107
MS.gene060634.t1 MTR_7g087590 37.500 152 91 1 3 150 4 155 2.50e-28 105
MS.gene060634.t1 MTR_1g095510 44.248 113 62 1 3 114 39 151 2.33e-27 100
MS.gene060634.t1 MTR_4g108080 39.450 109 66 0 36 144 35 143 5.00e-27 99.4
MS.gene060634.t1 MTR_8g028920 38.843 121 72 2 32 150 27 147 2.51e-26 98.2
MS.gene060634.t1 MTR_4g073240 53.012 83 39 0 70 152 4 86 2.80e-26 95.1
MS.gene060634.t1 MTR_4g106690 38.843 121 72 2 32 150 27 147 9.29e-25 94.4
MS.gene060634.t1 MTR_8g098595 38.017 121 73 2 32 150 12 132 1.33e-24 93.6
MS.gene060634.t1 MTR_4g063490 33.588 131 73 2 21 137 20 150 2.31e-23 90.1
MS.gene060634.t1 MTR_5g019480 40.000 105 62 1 30 134 6 109 7.14e-22 85.5
MS.gene060634.t1 MTR_2g096690 33.858 127 70 2 20 132 19 145 8.18e-22 86.3
MS.gene060634.t1 MTR_5g019480 40.000 105 62 1 30 134 57 160 1.46e-21 86.3
MS.gene060634.t1 MTR_5g019480 40.000 105 62 1 30 134 54 157 1.49e-21 85.9
MS.gene060634.t1 MTR_8g028920 37.736 106 64 2 47 150 3 108 3.12e-21 84.3
MS.gene060634.t1 MTR_2g096690 33.071 127 70 3 20 132 19 144 1.52e-19 80.5
MS.gene060634.t1 MTR_4g094872 37.374 99 60 1 26 122 30 128 4.73e-19 79.0
MS.gene060634.t1 MTR_5g016630 28.667 150 100 2 9 151 8 157 5.23e-18 76.3
MS.gene060634.t1 MTR_8g076490 37.000 100 61 2 9 107 19 117 4.29e-15 68.6
MS.gene060634.t1 MTR_2g096690 39.474 76 45 1 20 94 19 94 1.68e-13 63.5
MS.gene060634.t1 MTR_5g021260 35.000 100 63 2 9 107 19 117 2.25e-13 63.9
MS.gene060634.t1 MTR_1g073600 33.333 72 47 1 37 107 25 96 2.77e-13 63.2
MS.gene060634.t1 MTR_4g121960 30.328 122 75 4 8 124 13 129 5.03e-12 62.4
MS.gene060634.t1 MTR_1g103520 65.217 46 11 1 57 97 47 92 3.31e-11 57.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene060634.t1 AT1G78870 99.346 153 1 0 1 153 1 153 1.44e-111 313
MS.gene060634.t1 AT1G16890 99.346 153 1 0 1 153 1 153 2.24e-111 313
MS.gene060634.t1 AT1G16890 93.210 162 2 1 1 153 1 162 9.53e-108 304
MS.gene060634.t1 AT1G16890 100.000 120 0 0 34 153 1 120 3.03e-87 250
MS.gene060634.t1 AT1G78870 99.167 120 1 0 34 153 1 120 1.21e-86 249
MS.gene060634.t1 AT1G78870 98.347 121 1 1 34 153 1 121 7.98e-85 244
MS.gene060634.t1 AT1G78870 100.000 108 0 0 1 108 1 108 4.46e-77 224
MS.gene060634.t1 AT3G08690 49.655 145 73 0 8 152 4 148 2.03e-48 153
MS.gene060634.t1 AT3G08690 49.655 145 73 0 8 152 4 148 2.03e-48 153
MS.gene060634.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene060634.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene060634.t1 AT5G41700 49.655 145 73 0 8 152 4 148 2.22e-48 153
MS.gene060634.t1 AT1G64230 48.966 145 74 0 8 152 4 148 2.42e-48 153
MS.gene060634.t1 AT1G64230 48.966 145 74 0 8 152 4 148 2.42e-48 153
MS.gene060634.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene060634.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene060634.t1 AT5G53300 48.966 145 74 0 8 152 4 148 6.13e-48 152
MS.gene060634.t1 AT4G27960 48.966 145 74 0 8 152 4 148 9.60e-48 151
MS.gene060634.t1 AT2G16740 49.650 143 72 0 8 150 4 146 1.85e-47 151
MS.gene060634.t1 AT4G27960 48.966 145 74 0 8 152 34 178 3.91e-47 151
MS.gene060634.t1 AT5G56150 48.966 145 74 0 8 152 4 148 1.59e-46 148
MS.gene060634.t1 AT5G41700 49.315 146 73 1 8 152 4 149 2.51e-46 148
MS.gene060634.t1 AT1G64230 46.104 154 74 1 8 152 4 157 2.23e-45 146
MS.gene060634.t1 AT3G08700 45.890 146 78 1 8 152 4 149 2.02e-42 138
MS.gene060634.t1 AT3G08700 45.890 146 78 1 8 152 4 149 2.02e-42 138
MS.gene060634.t1 AT1G64230 46.000 150 76 1 8 152 41 190 2.25e-42 139
MS.gene060634.t1 AT1G64230 46.000 150 76 1 8 152 41 190 2.25e-42 139
MS.gene060634.t1 AT5G50870 46.528 144 75 2 9 150 6 149 7.17e-41 135
MS.gene060634.t1 AT5G62540 43.077 130 74 0 8 137 7 136 6.25e-38 127
MS.gene060634.t1 AT5G50870 43.226 155 75 3 9 150 6 160 1.80e-37 127
MS.gene060634.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene060634.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene060634.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene060634.t1 AT2G02760 39.416 137 83 0 8 144 7 143 1.84e-37 125
MS.gene060634.t1 AT1G14400 40.769 130 77 0 8 137 7 136 2.58e-37 125
MS.gene060634.t1 AT1G14400 40.769 130 77 0 8 137 7 136 2.58e-37 125
MS.gene060634.t1 AT3G13550 40.559 143 85 0 8 150 39 181 1.06e-35 122
MS.gene060634.t1 AT3G20060 44.531 128 71 0 8 135 39 166 2.32e-35 121
MS.gene060634.t1 AT3G20060 46.218 119 64 0 17 135 3 121 2.28e-34 117
MS.gene060634.t1 AT5G25760 41.781 146 81 3 9 150 7 152 9.85e-34 116
MS.gene060634.t1 AT5G25760 41.781 146 81 3 9 150 7 152 9.85e-34 116
MS.gene060634.t1 AT1G36340 43.056 144 81 1 8 151 11 153 2.71e-32 112
MS.gene060634.t1 AT1G36340 43.056 144 81 1 8 151 11 153 2.71e-32 112
MS.gene060634.t1 AT5G41700 48.077 104 54 0 8 111 4 107 1.71e-31 110
MS.gene060634.t1 AT1G50490 44.531 128 71 0 8 135 38 165 2.14e-31 111
MS.gene060634.t1 AT5G53300 48.485 99 51 0 8 106 4 102 8.13e-31 107
MS.gene060634.t1 AT3G24515 43.038 158 77 3 6 150 7 164 1.48e-30 114
MS.gene060634.t1 AT3G13550 42.857 112 64 0 8 119 39 150 3.62e-30 107
MS.gene060634.t1 AT5G56150 48.000 100 52 0 8 107 4 103 6.67e-30 105
MS.gene060634.t1 AT3G24515 48.246 114 55 1 41 150 76 189 3.48e-28 108
MS.gene060634.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene060634.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene060634.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene060634.t1 AT5G05080 35.294 153 95 1 2 150 3 155 1.44e-27 103
MS.gene060634.t1 AT1G63800 40.496 121 70 2 32 150 12 132 2.20e-25 95.5
MS.gene060634.t1 AT1G63800 40.496 121 70 2 32 150 27 147 2.86e-25 95.5
MS.gene060634.t1 AT5G41340 40.496 121 70 2 32 150 27 147 5.72e-25 95.1
MS.gene060634.t1 AT2G46030 40.496 121 70 2 32 150 27 147 8.88e-25 94.4
MS.gene060634.t1 AT2G46030 40.496 121 70 2 32 150 27 147 8.88e-25 94.4
MS.gene060634.t1 AT3G55380 33.113 151 87 2 1 137 1 151 1.14e-24 93.6
MS.gene060634.t1 AT2G46030 40.496 121 70 2 32 150 30 150 1.39e-24 94.0
MS.gene060634.t1 AT2G46030 40.496 121 70 2 32 150 30 150 1.39e-24 94.0
MS.gene060634.t1 AT2G46030 40.496 121 70 2 32 150 99 219 5.29e-24 94.0
MS.gene060634.t1 AT5G59300 33.333 132 74 2 20 137 19 150 7.10e-23 89.0
MS.gene060634.t1 AT2G32790 42.857 126 68 2 29 152 54 177 7.62e-23 89.4
MS.gene060634.t1 AT3G46460 34.091 132 73 2 20 137 19 150 1.28e-22 88.2
MS.gene060634.t1 AT4G36800 36.508 126 79 1 9 134 34 158 6.93e-22 87.0
MS.gene060634.t1 AT4G36800 36.508 126 79 1 9 134 34 158 6.93e-22 87.0
MS.gene060634.t1 AT5G41340 40.385 104 60 2 49 150 9 112 3.02e-21 84.3
MS.gene060634.t1 AT2G18600 35.714 126 80 1 9 134 35 159 2.94e-20 82.8
MS.gene060634.t1 AT2G18600 35.714 126 80 1 9 134 35 159 2.94e-20 82.8
MS.gene060634.t1 AT3G57870 32.558 129 80 2 1 122 1 129 9.22e-19 78.2
MS.gene060634.t1 AT3G55380 27.568 185 86 3 1 137 1 185 1.87e-18 78.6
MS.gene060634.t1 AT3G46460 33.663 101 54 1 50 137 8 108 1.59e-17 73.9
MS.gene060634.t1 AT3G46460 33.663 101 54 1 50 137 8 108 1.59e-17 73.9
MS.gene060634.t1 AT1G45050 35.000 100 63 2 9 107 19 117 1.97e-14 67.0
MS.gene060634.t1 AT1G75440 34.000 100 64 2 9 107 19 117 1.09e-13 65.1
MS.gene060634.t1 AT4G36410 34.000 100 64 2 9 107 19 117 4.57e-13 63.5
MS.gene060634.t1 AT5G42990 34.000 100 64 2 9 107 19 117 6.74e-13 62.8
MS.gene060634.t1 AT3G17000 29.060 117 73 4 8 118 14 126 6.52e-11 59.3

Find 41 sgRNAs with CRISPR-Local

Find 286 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATATAATCTGGTCCACTCTT+TGG 0.343468 2.2:+16793342 None:intergenic
TTCTCAGAAAGAGGATCATC+TGG 0.366062 2.2:+16793529 None:intergenic
GCAGCCATTGGATATTCTTC+AGG 0.381683 2.2:+16795800 None:intergenic
GAAGGGGATGCACTAATTCC+AGG 0.430653 2.2:+16797143 None:intergenic
AAGCATACCTTGTCAATGTT+AGG 0.438243 2.2:+16794227 None:intergenic
GAAATTCGATGCAGCTTGGC+AGG 0.441798 2.2:-16794147 MS.gene060634:intron
CTGAGAACATTGCTAAGCAT+TGG 0.441903 2.2:-16793513 MS.gene060634:CDS
GAAAGAGGATCATCTGGGTT+TGG 0.452444 2.2:+16793535 None:intergenic
TATTTCAATGTGATGATCCT+TGG 0.456529 2.2:-16797104 MS.gene060634:CDS
ACCAAATTGTCAAGCACCGC+TGG 0.462398 2.2:+16793318 None:intergenic
CTTCATAAGGAGACTGAGTT+GGG 0.469912 2.2:+16797081 None:intergenic
TGGAATTAGTGCATCCCCTT+CGG 0.472941 2.2:-16797141 MS.gene060634:CDS
AGCACCGCTGGCATATAATC+TGG 0.476499 2.2:+16793330 None:intergenic
CAGCGTTTGCTCAGTGAGCC+AGG 0.478486 2.2:-16797820 MS.gene060634:intron
GAGGCTGAGGCTGTTGAGAC+AGG 0.486241 2.2:-16793481 MS.gene060634:intron
AGTACCTTTGGAGCAGCCAT+TGG 0.489227 2.2:+16795788 None:intergenic
TTGATATTCTGAAAGATAAG+TGG 0.507902 2.2:-16794117 MS.gene060634:CDS
CCTTGATGATTCTTCGAGGA+AGG 0.515767 2.2:+16798262 None:intergenic
ATATCCAATGGCTGCTCCAA+AGG 0.528645 2.2:-16795792 MS.gene060634:intron
TTAGCAATGTTCTCAGAAAG+AGG 0.528946 2.2:+16793520 None:intergenic
AAAGTACAGTGCGAATCTGA+AGG 0.534958 2.2:+16794086 None:intergenic
GGGTCATCGCTACCTTCATA+AGG 0.535507 2.2:+16797068 None:intergenic
CCTTCATAAGGAGACTGAGT+TGG 0.537474 2.2:+16797080 None:intergenic
CCAACTCAGTCTCCTTATGA+AGG 0.539979 2.2:-16797080 MS.gene060634:intron
CGAACCTTGATGATTCTTCG+AGG 0.552069 2.2:+16798258 None:intergenic
TTAAATCTGCAGCCAAAGAG+TGG 0.559027 2.2:-16793354 MS.gene060634:intron
AAGGAGACTGAGTTGGGCCA+AGG 0.563036 2.2:+16797087 None:intergenic
TTGGAAATCTAACGAGGCTG+AGG 0.570066 2.2:-16793494 MS.gene060634:CDS
TTTGCCTGAAGAATATCCAA+TGG 0.577448 2.2:-16795804 MS.gene060634:CDS
ACAGTGCGAATCTGAAGGGC+GGG 0.582860 2.2:+16794091 None:intergenic
ACCGCATATTGTCTTCCGAA+GGG 0.591021 2.2:+16797126 None:intergenic
CCTTCCTCGAAGAATCATCA+AGG 0.595281 2.2:-16798262 MS.gene060634:intron
AAGTACAGTGCGAATCTGAA+GGG 0.608463 2.2:+16794087 None:intergenic
TCTCAGAAAGAGGATCATCT+GGG 0.624579 2.2:+16793530 None:intergenic
TACCGCATATTGTCTTCCGA+AGG 0.629625 2.2:+16797125 None:intergenic
CCCCTTCGGAAGACAATATG+CGG 0.635414 2.2:-16797127 MS.gene060634:CDS
TACAGTGCGAATCTGAAGGG+CGG 0.640507 2.2:+16794090 None:intergenic
CCGCATATTGTCTTCCGAAG+GGG 0.658062 2.2:+16797127 None:intergenic
TGGACCAGATTATATGCCAG+CGG 0.687231 2.2:-16793334 MS.gene060634:CDS
ATATCATCCTAACATTGACA+AGG 0.690087 2.2:-16794234 MS.gene060634:intron
TAAGCATTGGAAATCTAACG+AGG 0.750907 2.2:-16793500 MS.gene060634:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATATGATATGATAGATT+TGG - chr2.2:16797255-16797274 MS.gene060634:intron 15.0%
!! AATAAGTCAATAAATAGTTA+AGG - chr2.2:16796096-16796115 MS.gene060634:intron 15.0%
!! ATAAGTCAATAAATAGTTAA+GGG - chr2.2:16796097-16796116 MS.gene060634:intron 15.0%
!! ATATGATATGATTACAATAA+AGG + chr2.2:16794063-16794082 None:intergenic 15.0%
!! TAAAATTACATGTGAAATTA+GGG - chr2.2:16793523-16793542 MS.gene060634:CDS 15.0%
!! TAATGTATTATAGATTTGTA+TGG - chr2.2:16795325-16795344 MS.gene060634:intron 15.0%
!! TATGATATGATTACAATAAA+GGG + chr2.2:16794062-16794081 None:intergenic 15.0%
!! TATTTCAAAAAAGTTCAATT+TGG + chr2.2:16797707-16797726 None:intergenic 15.0%
!!! AAAGATTTTCTTGATAAATT+GGG - chr2.2:16796976-16796995 MS.gene060634:intron 15.0%
!!! AAATGGGATATTAATTATTT+TGG - chr2.2:16794611-16794630 MS.gene060634:intron 15.0%
!!! AATGGGATATTAATTATTTT+GGG - chr2.2:16794612-16794631 MS.gene060634:intron 15.0%
!!! GATAATAATGTAAATTTTGT+GGG - chr2.2:16798012-16798031 MS.gene060634:intron 15.0%
!!! TAGTTTTGAATTGTTTTTAT+TGG - chr2.2:16793686-16793705 MS.gene060634:intron 15.0%
!!! TGATAATAATGTAAATTTTG+TGG - chr2.2:16798011-16798030 MS.gene060634:intron 15.0%
!!! TTATTTTTTTCTTTCTTTTC+TGG - chr2.2:16797213-16797232 MS.gene060634:intron 15.0%
!!! TTTTTAAACCATAAATTATC+TGG - chr2.2:16797827-16797846 MS.gene060634:CDS 15.0%
!!! TTTTTAAGAGTTTTAGAAAA+AGG - chr2.2:16795972-16795991 MS.gene060634:intron 15.0%
!! AAACTCTTAAAAAAGTTTAC+AGG + chr2.2:16795965-16795984 None:intergenic 20.0%
!! ACAATTAAATTAAGTACCTT+TGG + chr2.2:16795830-16795849 None:intergenic 20.0%
!! ATCTTAAGAAGAAAATTGAA+AGG + chr2.2:16793373-16793392 None:intergenic 20.0%
!! GTAAAATTACATGTGAAATT+AGG - chr2.2:16793522-16793541 MS.gene060634:CDS 20.0%
!! TGTAAATAACCTTAAAATGA+CGG - chr2.2:16796181-16796200 MS.gene060634:intron 20.0%
!! TGTTTATCTTTGATAGAAAT+GGG - chr2.2:16794595-16794614 MS.gene060634:intron 20.0%
!!! ATAAATTTTGACTTTCTGAA+GGG - chr2.2:16795446-16795465 MS.gene060634:intron 20.0%
!!! ATGGGATATTAATTATTTTG+GGG - chr2.2:16794613-16794632 MS.gene060634:intron 20.0%
!!! GAAAGATTTTCTTGATAAAT+TGG - chr2.2:16796975-16796994 MS.gene060634:intron 20.0%
!!! TATAAATTTTGACTTTCTGA+AGG - chr2.2:16795445-16795464 MS.gene060634:intron 20.0%
!!! TCATTTTCTCTAATTGTTAT+CGG + chr2.2:16794037-16794056 None:intergenic 20.0%
!!! TGAATTTGATTTGATTTTTG+TGG - chr2.2:16793718-16793737 MS.gene060634:intron 20.0%
! AAGAGCTTGAATACTAAAAT+AGG + chr2.2:16798039-16798058 None:intergenic 25.0%
! AATCTTCAAGATTAGAGAAA+CGG - chr2.2:16796556-16796575 MS.gene060634:intron 25.0%
! ATAAAGATAAAGATTGCACA+TGG - chr2.2:16796598-16796617 MS.gene060634:intron 25.0%
! ATACATTATATTTGAACTGC+AGG + chr2.2:16795496-16795515 None:intergenic 25.0%
! ATCATCAAAGAAGAAAAGAA+AGG + chr2.2:16797418-16797437 None:intergenic 25.0%
! ATCTTGAAGATTAGAATTCT+TGG + chr2.2:16796548-16796567 None:intergenic 25.0%
! CGATCATAGAAATTGAAAAA+GGG + chr2.2:16793396-16793415 None:intergenic 25.0%
! GAAAAAATGTTGTCAAATAG+TGG - chr2.2:16794275-16794294 MS.gene060634:intron 25.0%
! GTGTTTATCTTTGATAGAAA+TGG - chr2.2:16794594-16794613 MS.gene060634:intron 25.0%
! GTTAGTACAAGTTTGTAATT+TGG + chr2.2:16796850-16796869 None:intergenic 25.0%
! TACATTATATTTGAACTGCA+GGG + chr2.2:16795495-16795514 None:intergenic 25.0%
! TACCATATAACACGAAAATA+GGG + chr2.2:16794250-16794269 None:intergenic 25.0%
! TATTTGGACAATCTAACAAA+TGG + chr2.2:16796920-16796939 None:intergenic 25.0%
! TCAGTGATGATTACAAAATT+AGG - chr2.2:16793581-16793600 MS.gene060634:intron 25.0%
! TCGATCATAGAAATTGAAAA+AGG + chr2.2:16793397-16793416 None:intergenic 25.0%
! TCTTGAAGATTAGAATTCTT+GGG + chr2.2:16796547-16796566 None:intergenic 25.0%
! TGTAATCATATCATATGTGT+TGG - chr2.2:16794067-16794086 MS.gene060634:intron 25.0%
! TGTATATCCTCTTATGAAAA+TGG - chr2.2:16798216-16798235 MS.gene060634:intron 25.0%
! TTCAAAAAAGTTCAATTTGG+AGG + chr2.2:16797704-16797723 None:intergenic 25.0%
! TTTGAAAACGACAAATAAAG+AGG + chr2.2:16796003-16796022 None:intergenic 25.0%
!! ACACAAGATTTAGAGTAATT+AGG + chr2.2:16793441-16793460 None:intergenic 25.0%
!! ATTATGTTGTCATTTCTTCT+TGG + chr2.2:16795927-16795946 None:intergenic 25.0%
!! ATTTTCTTGATAAATTGGGA+TGG - chr2.2:16796980-16796999 MS.gene060634:intron 25.0%
!! GTTGAAAGAATTTTTCATGT+TGG - chr2.2:16797754-16797773 MS.gene060634:intron 25.0%
!! TAAAGTGTTAGATGTTGAAT+CGG - chr2.2:16793609-16793628 MS.gene060634:intron 25.0%
!! TCTATTAACTACAGTTTTTC+AGG + chr2.2:16797607-16797626 None:intergenic 25.0%
!! TCTGTGTTGTGATATTATTT+TGG - chr2.2:16795866-16795885 MS.gene060634:intron 25.0%
!! TGAGATTTCTTTCTTTTATG+AGG + chr2.2:16795716-16795735 None:intergenic 25.0%
!! TGTAATTTGGTAAGTTTGTT+AGG + chr2.2:16796837-16796856 None:intergenic 25.0%
!! TTGATATTCTGAAAGATAAG+TGG - chr2.2:16797486-16797505 MS.gene060634:intron 25.0%
!! TTTCTCATATGTAACTCTTT+TGG - chr2.2:16795155-16795174 MS.gene060634:intron 25.0%
!!! ACTCTAATCTTTGTTATTGT+GGG - chr2.2:16795262-16795281 MS.gene060634:intron 25.0%
!!! CAGTAAATTGTTACTTTTGA+CGG + chr2.2:16796147-16796166 None:intergenic 25.0%
!!! GTAGATTGATTTTTTTTCAG+TGG - chr2.2:16793545-16793564 MS.gene060634:CDS 25.0%
!!! TACTCTAATCTTTGTTATTG+TGG - chr2.2:16795261-16795280 MS.gene060634:intron 25.0%
!!! TCATGTTGGTAAAGTTTTAT+GGG - chr2.2:16797768-16797787 MS.gene060634:intron 25.0%
!!! TGTGTGGTTTTTATTTTTTG+TGG - chr2.2:16793871-16793890 MS.gene060634:intron 25.0%
!!! TTCATGTTGGTAAAGTTTTA+TGG - chr2.2:16797767-16797786 MS.gene060634:intron 25.0%
AAAACTGTAGTTAACTCAAG+TGG - chr2.2:16797669-16797688 MS.gene060634:intron 30.0%
AAAATTAACCAGCTGTGTAT+TGG - chr2.2:16797974-16797993 MS.gene060634:intron 30.0%
AAACGATTTGATTAATGAGG+TGG - chr2.2:16794850-16794869 MS.gene060634:intron 30.0%
AAAGAAGAAAAGAAAGGCAA+GGG + chr2.2:16797412-16797431 None:intergenic 30.0%
AACACAAAATACGCATTTCA+AGG + chr2.2:16794579-16794598 None:intergenic 30.0%
AACATAAATCATACACACCA+AGG + chr2.2:16794167-16794186 None:intergenic 30.0%
AACGATTTGATTAATGAGGT+GGG - chr2.2:16794851-16794870 MS.gene060634:intron 30.0%
AACTTCATGAAAAGGAAAAG+TGG + chr2.2:16795418-16795437 None:intergenic 30.0%
AATAATGCTCAATTTCTACG+TGG - chr2.2:16797008-16797027 MS.gene060634:intron 30.0%
AATACGTCAACTTCATGAAA+AGG + chr2.2:16795426-16795445 None:intergenic 30.0%
AATTTGATTCATGTGCGATA+AGG - chr2.2:16793936-16793955 MS.gene060634:intron 30.0%
AGAAGAGCTAATAAGTTACT+GGG - chr2.2:16795217-16795236 MS.gene060634:intron 30.0%
AGTTAATCCACTAGAGTAAA+AGG + chr2.2:16797563-16797582 None:intergenic 30.0%
AGTTCAAGAAGATGTATACA+AGG + chr2.2:16794984-16795003 None:intergenic 30.0%
ATAAACAATCCACAATTCTG+AGG + chr2.2:16797194-16797213 None:intergenic 30.0%
ATATCATCCTAACATTGACA+AGG - chr2.2:16797369-16797388 MS.gene060634:intron 30.0%
ATCTTCAAGATTAGAGAAAC+GGG - chr2.2:16796557-16796576 MS.gene060634:intron 30.0%
ATTGAAAGTGAAGATACAAC+AGG - chr2.2:16796649-16796668 MS.gene060634:intron 30.0%
ATTGTGACTAGAGAATTATC+TGG + chr2.2:16796725-16796744 None:intergenic 30.0%
CAGAAATCAAAAGTAAGATC+CGG + chr2.2:16797906-16797925 None:intergenic 30.0%
CAGCAAAACAAAACAAAACA+AGG + chr2.2:16794405-16794424 None:intergenic 30.0%
CGTCAAAAGTAACAATTTAC+TGG - chr2.2:16796145-16796164 MS.gene060634:intron 30.0%
CTACCATATAACACGAAAAT+AGG + chr2.2:16794251-16794270 None:intergenic 30.0%
GACTTGGAAATACATTTGTA+TGG - chr2.2:16795542-16795561 MS.gene060634:intron 30.0%
GATCGATGTCAAACTTATAA+AGG - chr2.2:16796246-16796265 MS.gene060634:intron 30.0%
GCAGTGAATTAGAAATATCA+TGG + chr2.2:16794739-16794758 None:intergenic 30.0%
GCATTCAACCAGATAATTTA+TGG + chr2.2:16797838-16797857 None:intergenic 30.0%
GGAAATACATTTGTATGGAA+AGG - chr2.2:16795547-16795566 MS.gene060634:intron 30.0%
GGTAAAAATATATAACGCCT+AGG + chr2.2:16795059-16795078 None:intergenic 30.0%
GTCTTTAAATAGCCATCAAT+CGG + chr2.2:16796777-16796796 None:intergenic 30.0%
GTTCAAGAAGATGTATACAA+GGG + chr2.2:16794983-16795002 None:intergenic 30.0%
GTTGAATGCATAATTGATTG+TGG - chr2.2:16797849-16797868 MS.gene060634:intron 30.0%
TAAACAATCCACAATTCTGA+GGG + chr2.2:16797193-16797212 None:intergenic 30.0%
TAAACACATGATAAGAAGAC+AGG + chr2.2:16794953-16794972 None:intergenic 30.0%
TAGAAGAGCTAATAAGTTAC+TGG - chr2.2:16795216-16795235 MS.gene060634:intron 30.0%
TATTTCAATGTGATGATCCT+TGG - chr2.2:16794499-16794518 MS.gene060634:intron 30.0%
! AAATAACGGTTTGTTCAATG+CGG + chr2.2:16794347-16794366 None:intergenic 30.0%
! ACTTCTATGATCATTTCTAG+TGG - chr2.2:16795115-16795134 MS.gene060634:intron 30.0%
! ATAAGCACCATTTTCATAAG+AGG + chr2.2:16798226-16798245 None:intergenic 30.0%
! ATCATAGAAGTATACACACA+TGG + chr2.2:16795106-16795125 None:intergenic 30.0%
! ATCCCTATTTTCGTGTTATA+TGG - chr2.2:16794245-16794264 MS.gene060634:CDS 30.0%
! ATCCTGTTAATAATTTTGCG+AGG - chr2.2:16794826-16794845 MS.gene060634:intron 30.0%
! ATTTTCACCTTTTACTCTAG+TGG - chr2.2:16797553-16797572 MS.gene060634:intron 30.0%
! GCTTCTCTGATCATATTTTA+GGG - chr2.2:16795617-16795636 MS.gene060634:intron 30.0%
! TCATAGAAGTATACACACAT+GGG + chr2.2:16795105-16795124 None:intergenic 30.0%
! TGCTTCTCTGATCATATTTT+AGG - chr2.2:16795616-16795635 MS.gene060634:intron 30.0%
! TTTCTTTCTTTTATGAGGAG+AGG + chr2.2:16795711-16795730 None:intergenic 30.0%
!! AAGTTTTATGGGAAAACAGA+TGG - chr2.2:16797779-16797798 MS.gene060634:intron 30.0%
!! AATTTGGTAAGTTTGTTAGG+TGG + chr2.2:16796834-16796853 None:intergenic 30.0%
!! AGTTAAGGGTATCATAGAAA+AGG - chr2.2:16796111-16796130 MS.gene060634:intron 30.0%
!! CTATTATGCAGACTTGTTTT+GGG - chr2.2:16794679-16794698 MS.gene060634:intron 30.0%
!! TCTATTATGCAGACTTGTTT+TGG - chr2.2:16794678-16794697 MS.gene060634:intron 30.0%
!! TTCTTTGAAGTTCGTTATCT+TGG - chr2.2:16795007-16795026 MS.gene060634:intron 30.0%
!!! AGTGTGTCTCATTTTAACTT+GGG - chr2.2:16795516-16795535 MS.gene060634:intron 30.0%
!!! AGTGTTTTGTTTCCATTACT+AGG - chr2.2:16795752-16795771 MS.gene060634:intron 30.0%
!!! CAGTTTTTCAGGAAATGAAT+TGG + chr2.2:16797596-16797615 None:intergenic 30.0%
!!! GTGTTTTGTTTCCATTACTA+GGG - chr2.2:16795753-16795772 MS.gene060634:intron 30.0%
!!! GTTGTTAAGAGTTGCTATTT+TGG + chr2.2:16796812-16796831 None:intergenic 30.0%
!!! TAGTGTGTCTCATTTTAACT+TGG - chr2.2:16795515-16795534 MS.gene060634:intron 30.0%
!!! TCATATTTTAGGGTTTGGAA+AGG - chr2.2:16795627-16795646 MS.gene060634:intron 30.0%
!!! TCTGATCATATTTTAGGGTT+TGG - chr2.2:16795622-16795641 MS.gene060634:intron 30.0%
!!! TGTTTTGTTTCCATTACTAG+GGG - chr2.2:16795754-16795773 MS.gene060634:intron 30.0%
AAAAAATAGCTTCTCCGGTT+AGG - chr2.2:16796519-16796538 MS.gene060634:intron 35.0%
AAGCATACCTTGTCAATGTT+AGG + chr2.2:16797379-16797398 None:intergenic 35.0%
AAGTTACTGGGTCGAATAAA+TGG - chr2.2:16795229-16795248 MS.gene060634:intron 35.0%
ACACATACTGTGACTCTATT+TGG + chr2.2:16796936-16796955 None:intergenic 35.0%
AGCCAAAAAAATAGCTTCTC+CGG - chr2.2:16796514-16796533 MS.gene060634:intron 35.0%
AGGTGTAAAACCAAGTTGTT+AGG + chr2.2:16794559-16794578 None:intergenic 35.0%
AGTGTTTCTTTGATCTCTTC+AGG - chr2.2:16793755-16793774 MS.gene060634:intron 35.0%
ATATAATCTGGTCCACTCTT+TGG + chr2.2:16798264-16798283 None:intergenic 35.0%
ATGATAACCTTACACACCAA+AGG - chr2.2:16796684-16796703 MS.gene060634:intron 35.0%
ATTTACGAAAGAGGTCTAGT+AGG - chr2.2:16797123-16797142 MS.gene060634:CDS 35.0%
CAAAGAAGAAAAGAAAGGCA+AGG + chr2.2:16797413-16797432 None:intergenic 35.0%
CATTATATCCAATACACAGC+TGG + chr2.2:16797985-16798004 None:intergenic 35.0%
CTTACTCAATTTGTATGCGA+AGG - chr2.2:16797875-16797894 MS.gene060634:intron 35.0%
CTTGCATATACGTAACATTG+TGG - chr2.2:16797933-16797952 MS.gene060634:intron 35.0%
GATGAGAATAAGACAATACC+TGG + chr2.2:16793804-16793823 None:intergenic 35.0%
GCTTCATAGGGTAAAATTCA+AGG + chr2.2:16793993-16794012 None:intergenic 35.0%
GGAAATTGATGCATGAGTTA+TGG - chr2.2:16795346-16795365 MS.gene060634:intron 35.0%
GGCAAACGATTTGATTAATG+AGG - chr2.2:16794847-16794866 MS.gene060634:intron 35.0%
GGTGTAAAACCAAGTTGTTA+GGG + chr2.2:16794558-16794577 None:intergenic 35.0%
GTATGAAATGAGTGTTCCTT+TGG + chr2.2:16796703-16796722 None:intergenic 35.0%
GTCAAACTTATAAAGGCCAT+GGG - chr2.2:16796253-16796272 MS.gene060634:intron 35.0%
TAACAATTTACTGGTCCTCT+TGG - chr2.2:16796154-16796173 MS.gene060634:intron 35.0%
TACGTAACATTGTGGAAAGT+CGG - chr2.2:16797941-16797960 MS.gene060634:intron 35.0%
TGCCTCGCAAAATTATTAAC+AGG + chr2.2:16794831-16794850 None:intergenic 35.0%
TGTCAAACTTATAAAGGCCA+TGG - chr2.2:16796252-16796271 MS.gene060634:intron 35.0%
TTAGCAATGTTCTCAGAAAG+AGG + chr2.2:16798086-16798105 None:intergenic 35.0%
TTTGCCTGAAGAATATCCAA+TGG - chr2.2:16795799-16795818 MS.gene060634:CDS 35.0%
! AACAACTAGCTTGACTATAC+TGG - chr2.2:16795665-16795684 MS.gene060634:intron 35.0%
! AGATTCGCACTGTACTTTTA+AGG - chr2.2:16797522-16797541 MS.gene060634:intron 35.0%
! GTCTTTTGCAAGATACGTTA+TGG - chr2.2:16793910-16793929 MS.gene060634:intron 35.0%
! GTGCTTCTTAGATTTTACCT+TGG - chr2.2:16794147-16794166 MS.gene060634:intron 35.0%
! TTTCTTTTATGAGGAGAGGT+AGG + chr2.2:16795707-16795726 None:intergenic 35.0%
!! ATTGGAAAGTGTTTGTTGTG+TGG - chr2.2:16793855-16793874 MS.gene060634:intron 35.0%
!! TAAGCATTGGAAATCTAACG+AGG - chr2.2:16798103-16798122 MS.gene060634:intron 35.0%
!! TCTCTTTAGCCGTCATTTTA+AGG + chr2.2:16796193-16796212 None:intergenic 35.0%
!!! AACCGGAGAAGCTATTTTTT+TGG + chr2.2:16796519-16796538 None:intergenic 35.0%
!!! ATTTTAACTTGGGTGAGACT+TGG - chr2.2:16795526-16795545 MS.gene060634:intron 35.0%
!!! CTAGTGGATTAACTTTTTGC+TGG - chr2.2:16797569-16797588 MS.gene060634:intron 35.0%
!!! GTTTTGGGAATGATTCTGAA+AGG - chr2.2:16794694-16794713 MS.gene060634:intron 35.0%
!!! GTTTTGTTTCCATTACTAGG+GGG - chr2.2:16795755-16795774 MS.gene060634:intron 35.0%
AAAGTACAGTGCGAATCTGA+AGG + chr2.2:16797520-16797539 None:intergenic 40.0%
AACGCCTAGGTTGCATATAA+GGG + chr2.2:16795046-16795065 None:intergenic 40.0%
AAGTACAGTGCGAATCTGAA+GGG + chr2.2:16797519-16797538 None:intergenic 40.0%
ACAGCTATCGTGTATCTGAT+AGG - chr2.2:16797093-16797112 MS.gene060634:CDS 40.0%
ACGACTGTGACATGTACATA+TGG + chr2.2:16795080-16795099 None:intergenic 40.0%
ACTATGCAGCAATGGAATAG+CGG + chr2.2:16794309-16794328 None:intergenic 40.0%
AGAATTCTTGGGTTCCTAAC+CGG + chr2.2:16796536-16796555 None:intergenic 40.0%
AGCTATCGTGTATCTGATAG+GGG - chr2.2:16797095-16797114 MS.gene060634:CDS 40.0%
CAGCTATCGTGTATCTGATA+GGG - chr2.2:16797094-16797113 MS.gene060634:CDS 40.0%
CATTACTACTTCCAGGGTTT+AGG - chr2.2:16797059-16797078 MS.gene060634:intron 40.0%
CCTCTGCAGTGAATAGTTAA+GGG + chr2.2:16796063-16796082 None:intergenic 40.0%
CCTTAACTATTCACTGCAGA+GGG - chr2.2:16796061-16796080 MS.gene060634:intron 40.0%
CTAAACCCTGGAAGTAGTAA+TGG + chr2.2:16797061-16797080 None:intergenic 40.0%
CTGAGAACATTGCTAAGCAT+TGG - chr2.2:16798090-16798109 MS.gene060634:intron 40.0%
CTTCATAAGGAGACTGAGTT+GGG + chr2.2:16794525-16794544 None:intergenic 40.0%
GAAACCTTCTACACTACAGA+AGG + chr2.2:16793826-16793845 None:intergenic 40.0%
GAAATTCCACTATGCAGCAA+TGG + chr2.2:16794317-16794336 None:intergenic 40.0%
GAAGGTTTCACTCGGTTAAT+TGG - chr2.2:16793837-16793856 MS.gene060634:intron 40.0%
GAGGTGGGCATAAGAATATT+TGG - chr2.2:16794866-16794885 MS.gene060634:intron 40.0%
GCATATAAGGGCTAACAATG+TGG + chr2.2:16795034-16795053 None:intergenic 40.0%
GCTATAGAGCTATATCACAG+TGG - chr2.2:16794211-16794230 MS.gene060634:intron 40.0%
GGGGTTTACATTTACGAAAG+AGG - chr2.2:16797114-16797133 MS.gene060634:CDS 40.0%
GGTTATTTACACATGCCAAG+AGG + chr2.2:16796172-16796191 None:intergenic 40.0%
GTAGTGTAGAAGGTTTCACT+CGG - chr2.2:16793829-16793848 MS.gene060634:intron 40.0%
GTCATTTCTTCTTGGTAGAC+AGG + chr2.2:16795919-16795938 None:intergenic 40.0%
TAACGCCTAGGTTGCATATA+AGG + chr2.2:16795047-16795066 None:intergenic 40.0%
TCATCCTTCTGTAGTGTAGA+AGG - chr2.2:16793819-16793838 MS.gene060634:intron 40.0%
TCTCAGAAAGAGGATCATCT+GGG + chr2.2:16798076-16798095 None:intergenic 40.0%
TGAAGCCATTACTACTTCCA+GGG - chr2.2:16797053-16797072 MS.gene060634:intron 40.0%
TTAAATCTGCAGCCAAAGAG+TGG - chr2.2:16798249-16798268 MS.gene060634:intron 40.0%
TTACAGAATATCTCGTCCCA+TGG + chr2.2:16796272-16796291 None:intergenic 40.0%
TTAGCCCTTATATGCAACCT+AGG - chr2.2:16795039-16795058 MS.gene060634:intron 40.0%
TTCAAAGGGGGAGATATGAA+GGG + chr2.2:16796345-16796364 None:intergenic 40.0%
TTCTCAGAAAGAGGATCATC+TGG + chr2.2:16798077-16798096 None:intergenic 40.0%
TTGAAAACTCCCCCTAGTAA+TGG + chr2.2:16795767-16795786 None:intergenic 40.0%
TTGAAGCCATTACTACTTCC+AGG - chr2.2:16797052-16797071 MS.gene060634:intron 40.0%
TTTCAAAGGGGGAGATATGA+AGG + chr2.2:16796346-16796365 None:intergenic 40.0%
! AGTGTTTGACCCAGTCTTTT+TGG + chr2.2:16795185-16795204 None:intergenic 40.0%
! GTTTGAAATTCGATGCAGCT+TGG - chr2.2:16797452-16797471 MS.gene060634:intron 40.0%
! TAAGAAGCACAAATACCCCT+CGG + chr2.2:16794137-16794156 None:intergenic 40.0%
! TTCATGTGCGATAAGGCTTT+TGG - chr2.2:16793943-16793962 MS.gene060634:intron 40.0%
! TTGGTTCGTATCAGAACGAT+AGG - chr2.2:16794086-16794105 MS.gene060634:CDS 40.0%
! TTTGGTGCACCAAAAAGACT+GGG - chr2.2:16795173-16795192 MS.gene060634:intron 40.0%
! TTTTTGTCAAGAACCTGACC+TGG + chr2.2:16797348-16797367 None:intergenic 40.0%
!! TTTTGGTGCACCAAAAAGAC+TGG - chr2.2:16795172-16795191 MS.gene060634:intron 40.0%
AAATAGCCATCAATCGGCAG+AGG + chr2.2:16796771-16796790 None:intergenic 45.0%
AATAGCCATCAATCGGCAGA+GGG + chr2.2:16796770-16796789 None:intergenic 45.0%
AATCATGCCTTGCTTCTTCC+AGG - chr2.2:16797327-16797346 MS.gene060634:intron 45.0%
ACCGCATATTGTCTTCCGAA+GGG + chr2.2:16794480-16794499 None:intergenic 45.0%
ATATCCAATGGCTGCTCCAA+AGG - chr2.2:16795811-16795830 MS.gene060634:CDS 45.0%
CATGAGTTATGGCACTTGGT+TGG - chr2.2:16795357-16795376 MS.gene060634:intron 45.0%
CCAACTCAGTCTCCTTATGA+AGG - chr2.2:16794523-16794542 MS.gene060634:intron 45.0%
CCCTCTGCAGTGAATAGTTA+AGG + chr2.2:16796064-16796083 None:intergenic 45.0%
CCCTTAACTATTCACTGCAG+AGG - chr2.2:16796060-16796079 MS.gene060634:intron 45.0%
CCTTCATAAGGAGACTGAGT+TGG + chr2.2:16794526-16794545 None:intergenic 45.0%
CCTTCCTCGAAGAATCATCA+AGG - chr2.2:16793341-16793360 MS.gene060634:CDS 45.0%
CTCGCTGCATCAGTTTCAAA+GGG + chr2.2:16796359-16796378 None:intergenic 45.0%
CTGCAGATCACGGGAAATAA+CGG + chr2.2:16794361-16794380 None:intergenic 45.0%
CTTCGTGTCTGTGCTTCATA+GGG + chr2.2:16794005-16794024 None:intergenic 45.0%
GAAAGAGGATCATCTGGGTT+TGG + chr2.2:16798071-16798090 None:intergenic 45.0%
GATGCATGAGTTATGGCACT+TGG - chr2.2:16795353-16795372 MS.gene060634:intron 45.0%
GCAGCCATTGGATATTCTTC+AGG + chr2.2:16795806-16795825 None:intergenic 45.0%
GCTATTCCATTGCTGCATAG+TGG - chr2.2:16794308-16794327 MS.gene060634:intron 45.0%
GCTCAATTTCTACGTGGTCT+GGG - chr2.2:16797014-16797033 MS.gene060634:intron 45.0%
TACCGCATATTGTCTTCCGA+AGG + chr2.2:16794481-16794500 None:intergenic 45.0%
TACGAAAGAGGTCTAGTAGG+AGG - chr2.2:16797126-16797145 MS.gene060634:CDS 45.0%
TAGCGATGACCCTAACAACT+TGG - chr2.2:16794546-16794565 MS.gene060634:intron 45.0%
TCGCTGCATCAGTTTCAAAG+GGG + chr2.2:16796358-16796377 None:intergenic 45.0%
TCTCGCTGCATCAGTTTCAA+AGG + chr2.2:16796360-16796379 None:intergenic 45.0%
TCTTCGTGTCTGTGCTTCAT+AGG + chr2.2:16794006-16794025 None:intergenic 45.0%
TGCTCAATTTCTACGTGGTC+TGG - chr2.2:16797013-16797032 MS.gene060634:intron 45.0%
TGGAATTAGTGCATCCCCTT+CGG - chr2.2:16794462-16794481 MS.gene060634:intron 45.0%
TGGACCAGATTATATGCCAG+CGG - chr2.2:16798269-16798288 MS.gene060634:CDS 45.0%
TTATGGCACTTGGTTGGAGT+GGG - chr2.2:16795363-16795382 MS.gene060634:intron 45.0%
TTCACTGCAGAGGGAGAAAT+AGG - chr2.2:16796070-16796089 MS.gene060634:intron 45.0%
TTGGAAATCTAACGAGGCTG+AGG - chr2.2:16798109-16798128 MS.gene060634:intron 45.0%
TTTGTATGCGAAGGTTCAGC+CGG - chr2.2:16797884-16797903 MS.gene060634:intron 45.0%
! ACAATCCACAATTCTGAGGG+AGG + chr2.2:16797190-16797209 None:intergenic 45.0%
! CCTTGATGATTCTTCGAGGA+AGG + chr2.2:16793344-16793363 None:intergenic 45.0%
! CGAACCTTGATGATTCTTCG+AGG + chr2.2:16793348-16793367 None:intergenic 45.0%
! GAGTGTTCCTTTGGTGTGTA+AGG + chr2.2:16796694-16796713 None:intergenic 45.0%
!!! TCTTTTTATTTTATTTTTTA+AGG - chr2.2:16797150-16797169 MS.gene060634:intron 5.0%
AACCTGACCTGGAAGAAGCA+AGG + chr2.2:16797337-16797356 None:intergenic 50.0%
AACGATAGGTTTCCGACACC+GGG - chr2.2:16794100-16794119 MS.gene060634:CDS 50.0%
ACTGCAGAGGGAGAAATAGG+TGG - chr2.2:16796073-16796092 MS.gene060634:intron 50.0%
AGCACCGCTGGCATATAATC+TGG + chr2.2:16798276-16798295 None:intergenic 50.0%
ATAGCCATCAATCGGCAGAG+GGG + chr2.2:16796769-16796788 None:intergenic 50.0%
CCCCTTCGGAAGACAATATG+CGG - chr2.2:16794476-16794495 MS.gene060634:intron 50.0%
CCGCATATTGTCTTCCGAAG+GGG + chr2.2:16794479-16794498 None:intergenic 50.0%
CGCTGCATCAGTTTCAAAGG+GGG + chr2.2:16796357-16796376 None:intergenic 50.0%
GAAATTCGATGCAGCTTGGC+AGG - chr2.2:16797456-16797475 MS.gene060634:intron 50.0%
GAACGATAGGTTTCCGACAC+CGG - chr2.2:16794099-16794118 MS.gene060634:CDS 50.0%
GAAGGGGATGCACTAATTCC+AGG + chr2.2:16794463-16794482 None:intergenic 50.0%
GACAGGACATCTGTGAGAAG+AGG + chr2.2:16794936-16794955 None:intergenic 50.0%
GACATCTGTGAGAAGAGGAC+AGG + chr2.2:16794931-16794950 None:intergenic 50.0%
GGGTCATCGCTACCTTCATA+AGG + chr2.2:16794538-16794557 None:intergenic 50.0%
GTGCTGTCAACTGCAGATCA+CGG + chr2.2:16794371-16794390 None:intergenic 50.0%
GTTATGGCACTTGGTTGGAG+TGG - chr2.2:16795362-16795381 MS.gene060634:intron 50.0%
GTTTGTTCAATGCGGATCGC+AGG + chr2.2:16794339-16794358 None:intergenic 50.0%
TACAGTGCGAATCTGAAGGG+CGG + chr2.2:16797516-16797535 None:intergenic 50.0%
TCATGCCTCCCTCAGAATTG+TGG - chr2.2:16797182-16797201 MS.gene060634:intron 50.0%
TGCTGTCAACTGCAGATCAC+GGG + chr2.2:16794370-16794389 None:intergenic 50.0%
! GACTGTCGTTTCCTAAACCC+TGG + chr2.2:16797073-16797092 None:intergenic 50.0%
!! AGTACCTTTGGAGCAGCCAT+TGG + chr2.2:16795818-16795837 None:intergenic 50.0%
ACAGTGCGAATCTGAAGGGC+GGG + chr2.2:16797515-16797534 None:intergenic 55.0%
AGGGGGAGATATGAAGGGCA+AGG + chr2.2:16796340-16796359 None:intergenic 55.0%
GATTAAGCGTGTCCCGGTGT+CGG + chr2.2:16794115-16794134 None:intergenic 55.0%
TGCCTTGCTTCTTCCAGGTC+AGG - chr2.2:16797332-16797351 MS.gene060634:intron 55.0%
! AAGGAGACTGAGTTGGGCCA+AGG + chr2.2:16794519-16794538 None:intergenic 55.0%
! CTTTCCCCTCTGCCGATTGA+TGG - chr2.2:16796762-16796781 MS.gene060634:intron 55.0%
! TGATCTGATGATGCAGCGCC+TGG - chr2.2:16794442-16794461 MS.gene060634:intron 55.0%
ACCGGGACACGCTTAATCCG+AGG - chr2.2:16794117-16794136 MS.gene060634:CDS 60.0%
CAGCGTTTGCTCAGTGAGCC+AGG - chr2.2:16793783-16793802 MS.gene060634:intron 60.0%
CCCTCGGATTAAGCGTGTCC+CGG + chr2.2:16794121-16794140 None:intergenic 60.0%
CCGGGACACGCTTAATCCGA+GGG - chr2.2:16794118-16794137 MS.gene060634:CDS 60.0%
CGGGACACGCTTAATCCGAG+GGG - chr2.2:16794119-16794138 MS.gene060634:CDS 60.0%
GAGGCTGAGGCTGTTGAGAC+AGG - chr2.2:16798122-16798141 MS.gene060634:intron 60.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 16793327 16798298 16793327 ID=MS.gene060634
chr2.2 mRNA 16793327 16798298 16793327 ID=MS.gene060634.t1;Parent=MS.gene060634
chr2.2 exon 16798263 16798298 16798263 ID=MS.gene060634.t1.exon1;Parent=MS.gene060634.t1
chr2.2 CDS 16798263 16798298 16798263 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16797821 16797848 16797821 ID=MS.gene060634.t1.exon2;Parent=MS.gene060634.t1
chr2.2 CDS 16797821 16797848 16797821 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16797081 16797167 16797081 ID=MS.gene060634.t1.exon3;Parent=MS.gene060634.t1
chr2.2 CDS 16797081 16797167 16797081 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16795793 16795851 16795793 ID=MS.gene060634.t1.exon4;Parent=MS.gene060634.t1
chr2.2 CDS 16795793 16795851 16795793 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16794235 16794276 16794235 ID=MS.gene060634.t1.exon5;Parent=MS.gene060634.t1
chr2.2 CDS 16794235 16794276 16794235 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16794082 16794155 16794082 ID=MS.gene060634.t1.exon6;Parent=MS.gene060634.t1
chr2.2 CDS 16794082 16794155 16794082 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16793482 16793579 16793482 ID=MS.gene060634.t1.exon7;Parent=MS.gene060634.t1
chr2.2 CDS 16793482 16793579 16793482 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
chr2.2 exon 16793327 16793364 16793327 ID=MS.gene060634.t1.exon8;Parent=MS.gene060634.t1
chr2.2 CDS 16793327 16793364 16793327 ID=cds.MS.gene060634.t1;Parent=MS.gene060634.t1
Gene Sequence

>MS.gene060634

ATGGCTAACAGTAACCTTCCTCGAAGAATCATCAAGGTTCGTTCCTTTCAATTTTCTTCTTAAGATCCCTTTTTCAATTTCTATGATCGATTCGTTTTATCGATTTCTAAACCTAATTACTCTAAATCTTGTGTTTATTGTGTAACTTTTTCTTTCGATTATTGATTATCACGTTGATTATTAGCTTGATTGAACGTAAAATTACATGTGAAATTAGGGTAGATTGATTTTTTTTCAGTGGAACTAGCTTAATTTCAGTGATGATTACAAAATTAGGAAAATTAAAGTGTTAGATGTTGAATCGGTGATTCAACTTTTTTTTTTCTTTTTCTGATTTGATCTTTGTTGATGTTGAATTTTAGTTTTGAATTGTTTTTATTGGTTCTGTATTTGAATTTGATTTGATTTTTGTGGATGTTTTGATAACTAGTGTTTCTTTGATCTCTTCAGGAAACACAGCGTTTGCTCAGTGAGCCAGGTATTGTCTTATTCTCATCCTTCTGTAGTGTAGAAGGTTTCACTCGGTTAATTGGAAAGTGTTTGTTGTGTGGTTTTTATTTTTTGTGGTTTTTGTTTTAGTATAGTCTTTTGCAAGATACGTTATGGCGTAATTTGATTCATGTGCGATAAGGCTTTTGGTTGTTTTTGTTATTTTCTATGATACCTTGAATTTTACCCTATGAAGCACAGACACGAAGACACAGACACCGATAACAATTAGAGAAAATGACACCCTTTATTGTAATCATATCATATGTGTTGGTTCGTATCAGAACGATAGGTTTCCGACACCGGGACACGCTTAATCCGAGGGGTATTTGTGCTTCTTAGATTTTACCTTGGTGTGTATGATTTATGTTAAATCAGTGTTGTTAAATAGCTGCGCTATAGAGCTATATCACAGTGGAAATTGAATAAATCCCTATTTTCGTGTTATATGGTAGTTACGAAAAAATGTTGTCAAATAGTGGCTACAGCGCCGCTATTCCATTGCTGCATAGTGGAATTTCCTGCGATCCGCATTGAACAAACCGTTATTTCCCGTGATCTGCAGTTGACAGCACTGTGCATGTTTCCTTGTTTTGTTTTGTTTTGCTGTGTTGATTTATAATATTTGATCTGATGATGCAGCGCCTGGAATTAGTGCATCCCCTTCGGAAGACAATATGCGGTATTTCAATGTGATGATCCTTGGCCCAACTCAGTCTCCTTATGAAGGTAGCGATGACCCTAACAACTTGGTTTTACACCTTGAAATGCGTATTTTGTGTTTATCTTTGATAGAAATGGGATATTAATTATTTTGGGGCTTTTGAGTAAGTGTATTATTGTTTTCTATAAAAGATTTTTGTCTATTATGCAGACTTGTTTTGGGAATGATTCTGAAAGGAAACTGCTTTTATTTGTTGCCATGATATTTCTAATTCACTGCTTTTTTATCTCAAGTTGAACATAAACTGTTCGACTCTACAAACAGTCTATTAGTTATATGAAATGTTATCCTGTTAATAATTTTGCGAGGCAAACGATTTGATTAATGAGGTGGGCATAAGAATATTTGGATCTCATCATTATAGTCGTTAATGATTAAAGAATATCTGCCTGTCCTCTTCTCACAGATGTCCTGTCTTCTTATCATGTGTTTAACTTTAACCCTTGTATACATCTTCTTGAACTATTTTCTTTGAAGTTCGTTATCTTGGTCCACATTGTTAGCCCTTATATGCAACCTAGGCGTTATATATTTTTACCATATGTACATGTCACAGTCGTGTCCCATGTGTGTATACTTCTATGATCATTTCTAGTGGATTATTTGATGAGCTTATTTCTCATATGTAACTCTTTTGGTGCACCAAAAAGACTGGGTCAAACACTAGAATTTAGAATAGAAGAGCTAATAAGTTACTGGGTCGAATAAATGGATATTTACATACTCTAATCTTTGTTATTGTGGGTCATCTATTATACTCATTTTCGCATCATATTTGAAAGTCATAATGTATTATAGATTTGTATGGAAATTGATGCATGAGTTATGGCACTTGGTTGGAGTGGGATAAACAAGACAAGATTATACTCGCATCACCACTTTTCCTTTTCATGAAGTTGACGTATTATAAATTTTGACTTTCTGAAGGGTTTATCATCGAGTGTAGAGTGCACCCTGCAGTTCAAATATAATGTATAGTGTGTCTCATTTTAACTTGGGTGAGACTTGGAAATACATTTGTATGGAAAGGAACTATGTGTTGTCTGTGAACACTACGCGTGTGTCTCATGTTTGTATGCTTCTCTGATCATATTTTAGGGTTTGGAAAGGAATAGATTACTGAATAACAACTAGCTTGACTATACTGGAATTTTTTTATTCTCTCCTACCTCTCCTCATAAAAGAAAGAAATCTCAAGTTTACTGATGTGCAAGTGTTTTGTTTCCATTACTAGGGGGAGTTTTCAAGCTAGAACTATTTTTGCCTGAAGAATATCCAATGGCTGCTCCAAAGGTACTTAATTTAATTGTTGTCATTTTATTTTCATCTGTGTTGTGATATTATTTTGGTGTTAACTGTTAAGTTTCTGCTGTGTTCCTGTCTACCAAGAAGAAATGACAACATAATTATAAATTATTTTCACCTGTAAACTTTTTTAAGAGTTTTAGAAAAAGGTTGTTCCTCTTTATTTGTCGTTTTCAAAGTTCAATGCAACATCAATTATTGTTTTGTCAATAATACCCTTAACTATTCACTGCAGAGGGAGAAATAGGTGGAATAAGTCAATAAATAGTTAAGGGTATCATAGAAAAGGACAAATAATTCCGTCAAAAGTAACAATTTACTGGTCCTCTTGGCATGTGTAAATAACCTTAAAATGACGGCTAAAGAGAAACAGATATATTTTTCATGTCTTTGTATCTGATGATCGATGTCAAACTTATAAAGGCCATGGGACGAGATATTCTGTAAATTTGAAATTAATTGCACAGATGCACAGTCTTGTGTACACACTCACCTTGCCCTTCATATCTCCCCCTTTGAAACTGATGCAGCGAGAAATAGTAAACATATTTAATTAACTGTCTTAACATAGTTTTCAAAATTTTAAGATGATGAATAATTTGAGATAAGTTGATGTATTAAAATTGTGTGTGAAAATTCAATCAGCTAGCTTTTTACTTATAAGCTTTCAGCCAAAAAAATAGCTTCTCCGGTTAGGAACCCAAGAATTCTAATCTTCAAGATTAGAGAAACGGGTAAAACAAACTCAAATAGATAAAGATAAAGATTGCACATGGCTGAAGAATTTCTTATTTGTGAAGTGAGATTGAAAGTGAAGATACAACAGGTATACAATGATGATGATAACCTTACACACCAAAGGAACACTCATTTCATACCAGATAATTCTCTAGTCACAATTTAAGTATTAAAGCTATCTTTCCCCTCTGCCGATTGATGGCTATTTAAAGACTTCTATGATTAACCAAAATAGCAACTCTTAACAACCACCTAACAAACTTACCAAATTACAAACTTGTACTAACTAAATCTTAACTACTCTAATCATCTAATATTCTATATTCGAACACTGCCATTTGTTAGATTGTCCAAATAGAGTCACAGTATGTGTTTCTTTTAAAATGAAAATTGAAAGATTTTCTTGATAAATTGGGATGGAATATAATAATGCTCAATTTCTACGTGGTCTGGGATAATGTTGTGTATATTGAAGCCATTACTACTTCCAGGGTTTAGGAAACGACAGTCACAGCTATCGTGTATCTGATAGGGGTTTACATTTACGAAAGAGGTCTAGTAGGAGGTTCTTTTTATTTTATTTTTTAAGGATAATTTAATCATGCCTCCCTCAGAATTGTGGATTGTTTATTATTTTTTTCTTTCTTTTCTGGCTTTGATTCTTGTGATGATAAAATATGATATGATAGATTTGGAGTGTGCATTTTTTCTAAAAAATTCTGTAATAATTCTTATTCCTAATTCAATCATGCCTTGCTTCTTCCAGGTCAGGTTCTTGACAAAAATATATCATCCTAACATTGACAAGGTATGCTTTGCTTTGCTTCCCTTGCCTTTCTTTTCTTCTTTGATGATAAGCTTTTATAAAAGTTTGAAATTCGATGCAGCTTGGCAGGATATGTCTTGATATTCTGAAAGATAAGTGGAGTCCCGCCCTTCAGATTCGCACTGTACTTTTAAGGTATATTTAATTTTCACCTTTTACTCTAGTGGATTAACTTTTTGCTGGACCAATTCATTTCCTGAAAAACTGTAGTTAATAGATCATATGTGAAATAATTTTTTTATTTATCTTAAATCATTTTTAAAACTGTAGTTAACTCAAGTGGATTTGCAAGCCTCCAAATTGAACTTTTTTGAAATAAATGTTGTATGTATCTTAAATCATTTTGTTGAAAGAATTTTTCATGTTGGTAAAGTTTTATGGGAAAACAGATGGTTAAATTAACTTGTCAAATAGACATTTTTTAAACCATAAATTATCTGGTTGAATGCATAATTGATTGTGGTGACTTACTCAATTTGTATGCGAAGGTTCAGCCGGATCTTACTTTTGATTTCTGAGTTACTCTTGCATATACGTAACATTGTGGAAAGTCGGTTAAAAATGAAAAATTAACCAGCTGTGTATTGGATATAATGTTTTATTGATAATAATGTAAATTTTGTGGGTCCTATTTTAGTATTCAAGCTCTTTTGAGTGCACCAAACCCAGATGATCCTCTTTCTGAGAACATTGCTAAGCATTGGAAATCTAACGAGGCTGAGGCTGTTGAGACAGGTATGATCTCTTCTGCTAGCATGATTACATCAAAGTTTTTTATTTTTTAATGATAGCATCAGACGTGCTATGTGTATATCCTCTTATGAAAATGGTGCTTATTTTTTAAATCTGCAGCCAAAGAGTGGACCAGATTATATGCCAGCGGTGCTTGA

Protein sequence

>MS.gene060634.t1

MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA