Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80120.t1 | XP_003616636.1 | 99.1 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.00E+00 | 1175.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80120.t1 | Q39033 | 67.4 | 580 | 179 | 5 | 1 | 579 | 1 | 571 | 1.4e-232 | 807.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80120.t1 | G7KH12 | 99.1 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.0e+00 | 1175.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050657 | MS.gene80120 | 0.80243 | 5.63E-49 | -1.69E-46 |
MS.gene051492 | MS.gene80120 | 0.811078 | 8.38E-51 | -1.69E-46 |
MS.gene054468 | MS.gene80120 | 0.815403 | 9.41E-52 | -1.69E-46 |
MS.gene055926 | MS.gene80120 | 0.803939 | 2.74E-49 | -1.69E-46 |
MS.gene059774 | MS.gene80120 | 0.803842 | 2.87E-49 | -1.69E-46 |
MS.gene060697 | MS.gene80120 | 0.803799 | 2.93E-49 | -1.69E-46 |
MS.gene060777 | MS.gene80120 | 0.808268 | 3.37E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80120.t1 | MTR_5g082620 | 99.136 | 579 | 5 | 0 | 1 | 579 | 1 | 579 | 0.0 | 1197 |
MS.gene80120.t1 | MTR_3g070720 | 75.215 | 581 | 136 | 5 | 3 | 579 | 7 | 583 | 0.0 | 856 |
MS.gene80120.t1 | MTR_3g069280 | 73.274 | 565 | 140 | 5 | 17 | 579 | 7 | 562 | 0.0 | 801 |
MS.gene80120.t1 | MTR_5g071010 | 61.815 | 584 | 212 | 6 | 5 | 579 | 3 | 584 | 0.0 | 739 |
MS.gene80120.t1 | MTR_3g070720 | 73.737 | 495 | 122 | 5 | 3 | 493 | 7 | 497 | 0.0 | 700 |
MS.gene80120.t1 | MTR_5g082590 | 58.803 | 568 | 208 | 8 | 24 | 579 | 19 | 572 | 0.0 | 673 |
MS.gene80120.t1 | MTR_3g070720 | 72.318 | 466 | 121 | 5 | 3 | 464 | 7 | 468 | 0.0 | 635 |
MS.gene80120.t1 | MTR_3g070710 | 52.753 | 563 | 245 | 9 | 26 | 579 | 27 | 577 | 0.0 | 583 |
MS.gene80120.t1 | MTR_5g071040 | 51.291 | 581 | 241 | 11 | 3 | 577 | 17 | 561 | 0.0 | 570 |
MS.gene80120.t1 | MTR_3g070560 | 52.182 | 573 | 253 | 9 | 17 | 579 | 17 | 578 | 0.0 | 570 |
MS.gene80120.t1 | MTR_5g082580 | 49.493 | 592 | 276 | 9 | 6 | 579 | 11 | 597 | 0.0 | 568 |
MS.gene80120.t1 | MTR_3g070720 | 70.773 | 414 | 113 | 5 | 3 | 412 | 7 | 416 | 0.0 | 537 |
MS.gene80120.t1 | MTR_3g070560 | 55.797 | 414 | 171 | 5 | 168 | 579 | 2 | 405 | 7.10e-159 | 461 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene80120.t1 | AT3G08510 | 67.869 | 582 | 173 | 6 | 1 | 579 | 1 | 571 | 0.0 | 820 |
MS.gene80120.t1 | AT3G08510 | 67.869 | 582 | 173 | 6 | 1 | 579 | 1 | 571 | 0.0 | 820 |
MS.gene80120.t1 | AT3G55940 | 66.154 | 585 | 181 | 7 | 1 | 579 | 1 | 574 | 0.0 | 782 |
MS.gene80120.t1 | AT3G08510 | 63.574 | 582 | 169 | 7 | 1 | 579 | 1 | 542 | 0.0 | 743 |
MS.gene80120.t1 | AT3G08510 | 63.574 | 582 | 169 | 7 | 1 | 579 | 1 | 542 | 0.0 | 743 |
MS.gene80120.t1 | AT2G40116 | 61.394 | 531 | 187 | 7 | 56 | 579 | 84 | 603 | 0.0 | 664 |
MS.gene80120.t1 | AT5G58700 | 57.653 | 588 | 227 | 12 | 5 | 579 | 9 | 587 | 0.0 | 660 |
MS.gene80120.t1 | AT5G58700 | 57.653 | 588 | 227 | 12 | 5 | 579 | 9 | 587 | 0.0 | 660 |
MS.gene80120.t1 | AT5G58700 | 63.125 | 480 | 170 | 6 | 103 | 579 | 4 | 479 | 0.0 | 616 |
MS.gene80120.t1 | AT5G58690 | 52.759 | 580 | 245 | 9 | 5 | 576 | 7 | 565 | 0.0 | 609 |
MS.gene80120.t1 | AT5G58690 | 52.759 | 580 | 245 | 9 | 5 | 576 | 7 | 565 | 0.0 | 609 |
MS.gene80120.t1 | AT5G58690 | 54.011 | 561 | 229 | 9 | 24 | 576 | 7 | 546 | 0.0 | 602 |
MS.gene80120.t1 | AT5G58670 | 52.586 | 580 | 236 | 5 | 3 | 577 | 2 | 547 | 0.0 | 601 |
MS.gene80120.t1 | AT4G38530 | 50.862 | 580 | 247 | 7 | 4 | 579 | 3 | 548 | 0.0 | 579 |
MS.gene80120.t1 | AT3G47290 | 38.793 | 580 | 278 | 15 | 14 | 579 | 5 | 521 | 9.26e-118 | 359 |
MS.gene80120.t1 | AT3G47290 | 38.850 | 574 | 274 | 15 | 14 | 573 | 5 | 515 | 3.06e-116 | 357 |
MS.gene80120.t1 | AT3G47220 | 36.878 | 583 | 286 | 15 | 13 | 579 | 5 | 521 | 1.19e-108 | 336 |
Find 132 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCAAATTATAATCCCTTAAT+TGG | 0.063516 | 5.4:-65248454 | MS.gene80120:CDS |
CTTTGTCGCATCAGAATTTC+CGG | 0.215738 | 5.4:-65250047 | MS.gene80120:CDS |
TTCTTAGGTGACTGTATATA+TGG | 0.217887 | 5.4:-65247597 | MS.gene80120:intron |
CTGGAGTAAGATGGTCTTCT+AGG | 0.232724 | 5.4:+65250014 | None:intergenic |
TCCATGAATCCACCCAATTA+AGG | 0.262517 | 5.4:+65248441 | None:intergenic |
CCCTTAATTGGGTGGATTCA+TGG | 0.271157 | 5.4:-65248442 | MS.gene80120:CDS |
GCAATCAAACCTTTATATTC+TGG | 0.281903 | 5.4:+65249208 | None:intergenic |
TAGATGCTTGAGGTCTATTA+AGG | 0.282266 | 5.4:-65250077 | MS.gene80120:CDS |
GCCACTTTGGCTTGAAGATC+TGG | 0.289061 | 5.4:+65249995 | None:intergenic |
TAAATACAGGTTGGGATTGC+TGG | 0.296624 | 5.4:-65247400 | MS.gene80120:intron |
CCAAACATGCTTACCTGTTT+CGG | 0.306660 | 5.4:-65247215 | MS.gene80120:CDS |
CTTACTCTTGCATAGAAATC+TGG | 0.318132 | 5.4:+65247521 | None:intergenic |
AGTTGTATTTATCTCCCTTC+TGG | 0.319388 | 5.4:+65247155 | None:intergenic |
TGAGTTCCCGCTTACTGTTC+CGG | 0.319955 | 5.4:-65247302 | MS.gene80120:CDS |
TCTCATTATTTCATATATAC+TGG | 0.332144 | 5.4:-65250604 | MS.gene80120:CDS |
TTCACAGGTAACTTAGCTTT+AGG | 0.344189 | 5.4:+65247724 | None:intergenic |
TTGGTTCCATTGTAGGGGTA+TGG | 0.346040 | 5.4:-65247856 | MS.gene80120:intron |
CCGAAACAGGTAAGCATGTT+TGG | 0.351920 | 5.4:+65247215 | None:intergenic |
AAGGTACTCCTTAGGTGGTT+TGG | 0.352592 | 5.4:+65249513 | None:intergenic |
GAGTCAATGCGAGTACCTTT+TGG | 0.358619 | 5.4:+65248478 | None:intergenic |
GATAATGTTGATGTTCTTCA+TGG | 0.363896 | 5.4:-65250460 | MS.gene80120:CDS |
TTCACTGCACGGAAAGGCTT+CGG | 0.364515 | 5.4:-65249458 | MS.gene80120:CDS |
TAGATGGTTACTTCAACATT+TGG | 0.368286 | 5.4:-65249619 | MS.gene80120:CDS |
GGGTAATTGAGTTGGACTTA+TGG | 0.369086 | 5.4:-65250498 | MS.gene80120:CDS |
CAAGGGCAATAGAGGATAAC+TGG | 0.369854 | 5.4:-65247348 | MS.gene80120:CDS |
CCAGTCGTTAAGAGAAAATC+TGG | 0.371762 | 5.4:+65247769 | None:intergenic |
ATGTCCGAGAAAGATGATTT+TGG | 0.376271 | 5.4:-65247241 | MS.gene80120:CDS |
TTAGTCTCATACCTTGTAAT+CGG | 0.378048 | 5.4:+65249381 | None:intergenic |
CCATCTTTAGGGAAACAGTT+TGG | 0.381531 | 5.4:-65249296 | MS.gene80120:intron |
TATCTCCCTTCTGGCTATGC+AGG | 0.385216 | 5.4:+65247164 | None:intergenic |
GGTCACAATTCCTATCTAAC+CGG | 0.390542 | 5.4:-65250583 | MS.gene80120:CDS |
TTTGTCTCAAGGTACTCCTT+AGG | 0.390852 | 5.4:+65249505 | None:intergenic |
CTCTGCAACGCTTTCACGAT+TGG | 0.394778 | 5.4:+65250529 | None:intergenic |
TCCTTCAAGCTTTCTGAGCC+AGG | 0.395536 | 5.4:+65249580 | None:intergenic |
GTCACTGCTCAGCTGATTCC+CGG | 0.395646 | 5.4:+65250564 | None:intergenic |
GCCACCAAAATCATCTTTCT+CGG | 0.396908 | 5.4:+65247237 | None:intergenic |
TCACTGCACGGAAAGGCTTC+GGG | 0.407660 | 5.4:-65249457 | MS.gene80120:CDS |
GAGATCCCGAGCTTCAAGTT+AGG | 0.417679 | 5.4:-65249412 | MS.gene80120:CDS |
CCACTCCTTAGCTCCGAAAC+AGG | 0.428640 | 5.4:+65247202 | None:intergenic |
CTTATACGCCTCGCTTTCTC+CGG | 0.429732 | 5.4:+65249133 | None:intergenic |
CAGCTGATTCCCGGTTAGAT+AGG | 0.433100 | 5.4:+65250573 | None:intergenic |
CCATGAATCCACCCAATTAA+GGG | 0.444510 | 5.4:+65248442 | None:intergenic |
CATACAGTGTTTGTTTATGC+TGG | 0.447970 | 5.4:-65252492 | MS.gene80120:CDS |
AAGTGAGCAACAACTTGAAA+AGG | 0.451992 | 5.4:-65249107 | MS.gene80120:CDS |
GGTTTGATTGCCATTCATGC+TGG | 0.453201 | 5.4:-65249196 | MS.gene80120:CDS |
CAAATTATAATCCCTTAATT+GGG | 0.455647 | 5.4:-65248453 | MS.gene80120:CDS |
TGGTTCCATTGTAGGGGTAT+GGG | 0.456000 | 5.4:-65247855 | MS.gene80120:intron |
CTCATGGAAAAGAAATTGTC+AGG | 0.458333 | 5.4:-65249075 | MS.gene80120:intron |
TCTTCTAGGGTTATTACAAC+CGG | 0.465124 | 5.4:+65250028 | None:intergenic |
ACCTGTGAAGACTACTTTGA+AGG | 0.465356 | 5.4:-65247710 | MS.gene80120:intron |
AAGAACATCAACATTATCCT+TGG | 0.475267 | 5.4:+65250465 | None:intergenic |
TCTTAGGTGACTGTATATAT+GGG | 0.491202 | 5.4:-65247596 | MS.gene80120:intron |
ACCTGGCTCAGAAAGCTTGA+AGG | 0.492584 | 5.4:-65249581 | MS.gene80120:CDS |
CGGAAATTCTGATGCGACAA+AGG | 0.493340 | 5.4:+65250048 | None:intergenic |
AAGAGGGTCTTGATCTCTTG+TGG | 0.493379 | 5.4:+65252436 | None:intergenic |
AAGCGTTGCAGAGAGGTGTA+AGG | 0.494457 | 5.4:-65250519 | MS.gene80120:CDS |
CGCATGGCTCAAAATAGATC+CGG | 0.496028 | 5.4:-65249152 | MS.gene80120:CDS |
ACATTATCCTTGGATGCATT+AGG | 0.497632 | 5.4:+65250475 | None:intergenic |
TTAACTAACCTCAGCCACTT+TGG | 0.500319 | 5.4:+65249982 | None:intergenic |
AGGTTTGTTATCCGATTACA+AGG | 0.501056 | 5.4:-65249392 | MS.gene80120:intron |
GGATCAAAGACCTCATTATC+CGG | 0.501977 | 5.4:+65247745 | None:intergenic |
AGGATAACTGGCTGCCTACA+TGG | 0.502775 | 5.4:-65247336 | MS.gene80120:CDS |
ATTCATGCTGGGAAGTCAAA+AGG | 0.503502 | 5.4:-65249184 | MS.gene80120:CDS |
GCTTACCTGTTTCGGAGCTA+AGG | 0.504467 | 5.4:-65247207 | MS.gene80120:CDS |
GTGGATTCATGGAGCTCAAA+TGG | 0.506219 | 5.4:-65248431 | MS.gene80120:CDS |
CGTGAACTTCTATACGAAGA+AGG | 0.506720 | 5.4:+65247272 | None:intergenic |
AACATAACCACACCCTCCAT+TGG | 0.506899 | 5.4:+65247798 | None:intergenic |
ATTATAATCCCTTAATTGGG+TGG | 0.507171 | 5.4:-65248450 | MS.gene80120:CDS |
CCTTGAGACAAAAGAAGTAA+AGG | 0.507809 | 5.4:-65249494 | MS.gene80120:CDS |
ACAAACCTAACTTGAAGCTC+GGG | 0.512099 | 5.4:+65249407 | None:intergenic |
TTCGGGCGACGATGAAGCGT+GGG | 0.512146 | 5.4:-65249440 | MS.gene80120:CDS |
ACCTTCAAAGTAGTCTTCAC+AGG | 0.513097 | 5.4:+65247709 | None:intergenic |
ATTCTGAGGGTGTTTCCAAA+AGG | 0.513881 | 5.4:-65248493 | MS.gene80120:CDS |
GTCTCAAGGTACTCCTTAGG+TGG | 0.517428 | 5.4:+65249508 | None:intergenic |
AGGTGTAAGGGTAATTGAGT+TGG | 0.519469 | 5.4:-65250506 | MS.gene80120:CDS |
GAAAAGGCTGCTATAACTCA+TGG | 0.519626 | 5.4:-65249091 | MS.gene80120:CDS |
AATGGTTGCATTCAACATGC+AGG | 0.520279 | 5.4:-65248413 | MS.gene80120:intron |
ATACGAAGAAGGGCTAGTTC+CGG | 0.521787 | 5.4:+65247283 | None:intergenic |
CACGTAGCTCCAGAATATAA+AGG | 0.523016 | 5.4:-65249217 | MS.gene80120:CDS |
AACAAACCTAACTTGAAGCT+CGG | 0.526863 | 5.4:+65249406 | None:intergenic |
CATGGAATGTTTAGAGCCAA+TGG | 0.529913 | 5.4:-65247814 | MS.gene80120:CDS |
AGGGGTATGGGAGATCACTT+TGG | 0.529986 | 5.4:-65247843 | MS.gene80120:CDS |
TTCTGAGTATTGTTCAAAGA+GGG | 0.538272 | 5.4:+65252420 | None:intergenic |
GTGATGTGACTTGTCTGATT+CGG | 0.543300 | 5.4:+65249240 | None:intergenic |
CTTCGGGCGACGATGAAGCG+TGG | 0.544355 | 5.4:-65249441 | MS.gene80120:CDS |
TATATCAACCAAACCACCTA+AGG | 0.545265 | 5.4:-65249521 | MS.gene80120:CDS |
TTTAGAGCCAATGGAGGGTG+TGG | 0.547065 | 5.4:-65247805 | MS.gene80120:CDS |
TCTTCAAGCCAAAGTGGCTG+AGG | 0.551128 | 5.4:-65249990 | MS.gene80120:intron |
GTTTCCCTGCATAGCCAGAA+GGG | 0.556734 | 5.4:-65247169 | MS.gene80120:CDS |
ATCTCCCTTCTGGCTATGCA+GGG | 0.556839 | 5.4:+65247165 | None:intergenic |
TGGAGCTCATTAGATGCTTG+AGG | 0.557147 | 5.4:-65250087 | MS.gene80120:CDS |
GTTTGATTGCCATTCATGCT+GGG | 0.558863 | 5.4:-65249195 | MS.gene80120:CDS |
AAGCATCTAATGAGCTCCAC+AGG | 0.560130 | 5.4:+65250091 | None:intergenic |
AGTTTCCCTGCATAGCCAGA+AGG | 0.561034 | 5.4:-65247170 | MS.gene80120:CDS |
AACGACTGGTCCGGATAATG+AGG | 0.561220 | 5.4:-65247755 | MS.gene80120:CDS |
CTTATGGCCTAATGCATCCA+AGG | 0.566610 | 5.4:-65250482 | MS.gene80120:CDS |
ATGTTGATGTTCTTCATGGA+AGG | 0.566931 | 5.4:-65250456 | MS.gene80120:intron |
TCCAGATCTTCAAGCCAAAG+TGG | 0.567810 | 5.4:-65249996 | MS.gene80120:CDS |
TATATGAAATAATGAGACAA+GGG | 0.570160 | 5.4:+65250610 | None:intergenic |
TGGAGTAAGATGGTCTTCTA+GGG | 0.570432 | 5.4:+65250015 | None:intergenic |
AAATAGATCCGGAGAAAGCG+AGG | 0.570607 | 5.4:-65249141 | MS.gene80120:CDS |
GGATGATTCACTGCACGGAA+AGG | 0.571504 | 5.4:-65249464 | MS.gene80120:CDS |
CTAGTTCCGGAACAGTAAGC+GGG | 0.572544 | 5.4:+65247296 | None:intergenic |
TCGGGCGACGATGAAGCGTG+GGG | 0.572788 | 5.4:-65249439 | MS.gene80120:CDS |
TTTCTGAGTATTGTTCAAAG+AGG | 0.578422 | 5.4:+65252419 | None:intergenic |
CTTGAAGATCTGGAGTAAGA+TGG | 0.581839 | 5.4:+65250005 | None:intergenic |
AGATCACTTTGGCTGATGCA+TGG | 0.591647 | 5.4:-65247832 | MS.gene80120:CDS |
GTGACTGTATATATGGGAGA+AGG | 0.593969 | 5.4:-65247590 | MS.gene80120:CDS |
CTGTATATATGGGAGAAGGA+TGG | 0.596370 | 5.4:-65247586 | MS.gene80120:CDS |
TTACTCAGAAGAATATTCTG+AGG | 0.598350 | 5.4:-65248507 | MS.gene80120:CDS |
TCAAATACCTCGTTCCATGT+AGG | 0.605540 | 5.4:+65247322 | None:intergenic |
TACTCAGAAGAATATTCTGA+GGG | 0.607678 | 5.4:-65248506 | MS.gene80120:CDS |
GCTAGTTCCGGAACAGTAAG+CGG | 0.611031 | 5.4:+65247295 | None:intergenic |
AAAGAGGATGATTCACTGCA+CGG | 0.615717 | 5.4:-65249469 | MS.gene80120:CDS |
AGCGTTGCAGAGAGGTGTAA+GGG | 0.624722 | 5.4:-65250518 | MS.gene80120:CDS |
CCTGTTTCGGAGCTAAGGAG+TGG | 0.625863 | 5.4:-65247202 | MS.gene80120:CDS |
GTGAACTTCTATACGAAGAA+GGG | 0.630679 | 5.4:+65247273 | None:intergenic |
CAAAAGGAGGAATAGACGCA+TGG | 0.636910 | 5.4:-65249168 | MS.gene80120:CDS |
GGAGACATACTATATGTACC+TGG | 0.641489 | 5.4:-65249598 | MS.gene80120:CDS |
GTCACAATTCCTATCTAACC+GGG | 0.642865 | 5.4:-65250582 | MS.gene80120:CDS |
CAATTGAAGGTAAAAGAGCA+AGG | 0.649160 | 5.4:+65252224 | None:intergenic |
TAGGACATTGACTACTCCTG+TGG | 0.652547 | 5.4:-65250107 | MS.gene80120:CDS |
GGAATGTTTAGAGCCAATGG+AGG | 0.657335 | 5.4:-65247811 | MS.gene80120:CDS |
ATATATGAAATAATGAGACA+AGG | 0.660350 | 5.4:+65250609 | None:intergenic |
GAATGTTTAGAGCCAATGGA+GGG | 0.667916 | 5.4:-65247810 | MS.gene80120:CDS |
CTTTATATTCTGGAGCTACG+TGG | 0.670500 | 5.4:+65249218 | None:intergenic |
CATGCTGGGAAGTCAAAAGG+AGG | 0.672037 | 5.4:-65249181 | MS.gene80120:CDS |
ACTCTTGCATAGAAATCTGG+AGG | 0.672637 | 5.4:+65247524 | None:intergenic |
CGGGCGACGATGAAGCGTGG+GGG | 0.678934 | 5.4:-65249438 | MS.gene80120:CDS |
CTGGCTGCCTACATGGAACG+AGG | 0.693778 | 5.4:-65247329 | MS.gene80120:CDS |
ACAAGGGTAATGTCATGTCA+TGG | 0.693829 | 5.4:+65250626 | None:intergenic |
ATCGTGAAAGCGTTGCAGAG+AGG | 0.719532 | 5.4:-65250526 | MS.gene80120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTTTTATTATTAAATCAG+CGG | + | chr5.4:65248250-65248269 | None:intergenic | 10.0% |
!!! | TTTACATTTTTTTAATCTAT+AGG | - | chr5.4:65249532-65249551 | MS.gene80120:CDS | 10.0% |
!! | AATATTAAATTAGATACACT+TGG | + | chr5.4:65252004-65252023 | None:intergenic | 15.0% |
!! | AGTTATATCCTATAATAAAA+GGG | + | chr5.4:65248546-65248565 | None:intergenic | 15.0% |
!! | ATAGTATAATGAAAAAAACA+AGG | - | chr5.4:65252292-65252311 | MS.gene80120:CDS | 15.0% |
!! | TAGTATAATGAAAAAAACAA+GGG | - | chr5.4:65252293-65252312 | MS.gene80120:CDS | 15.0% |
!!! | ATATTTTATTAGCATATACT+CGG | + | chr5.4:65247991-65248010 | None:intergenic | 15.0% |
!!! | ATTATGTCTAAATTTTTAGA+TGG | - | chr5.4:65250023-65250042 | MS.gene80120:CDS | 15.0% |
!!! | ATTTTCAAGAAAATAATTTC+TGG | + | chr5.4:65249498-65249517 | None:intergenic | 15.0% |
!!! | CTATTTTCTTAAAATATTAC+AGG | + | chr5.4:65251461-65251480 | None:intergenic | 15.0% |
!!! | GATAGTATTTTTCTAATATT+CGG | - | chr5.4:65250888-65250907 | MS.gene80120:intron | 15.0% |
!!! | TAATTTTGACGAAATTTAAA+AGG | - | chr5.4:65250859-65250878 | MS.gene80120:intron | 15.0% |
!!! | TATATTATTGATTATGATGT+TGG | - | chr5.4:65251753-65251772 | MS.gene80120:intron | 15.0% |
!!! | TGATTTGATAATTTAAATAC+AGG | - | chr5.4:65252245-65252264 | MS.gene80120:CDS | 15.0% |
!! | ACATTGTGAACTATATTTAT+TGG | + | chr5.4:65248369-65248388 | None:intergenic | 20.0% |
!! | ATATATGAAATAATGAGACA+AGG | + | chr5.4:65249052-65249071 | None:intergenic | 20.0% |
!! | CAAATTATAATCCCTTAATT+GGG | - | chr5.4:65251205-65251224 | MS.gene80120:intron | 20.0% |
!! | CAGTTATATCCTATAATAAA+AGG | + | chr5.4:65248547-65248566 | None:intergenic | 20.0% |
!! | CATATAAATTTCCATCTTTA+GGG | - | chr5.4:65250351-65250370 | MS.gene80120:intron | 20.0% |
!! | CATTCATTTCAAACATAAAA+AGG | + | chr5.4:65250635-65250654 | None:intergenic | 20.0% |
!! | CATTTATCAAAGAAAATAGA+AGG | + | chr5.4:65249272-65249291 | None:intergenic | 20.0% |
!! | GAAGTATGATATTACTATAT+TGG | + | chr5.4:65252036-65252055 | None:intergenic | 20.0% |
!! | GATGTATTTAATGTAGAATT+CGG | + | chr5.4:65247804-65247823 | None:intergenic | 20.0% |
!! | GTAAAAATGATATGCTAATA+TGG | + | chr5.4:65249461-65249480 | None:intergenic | 20.0% |
!! | GTATTGTACTATAATGAAAA+AGG | + | chr5.4:65248524-65248543 | None:intergenic | 20.0% |
!! | TATATGAAATAATGAGACAA+GGG | + | chr5.4:65249051-65249070 | None:intergenic | 20.0% |
!! | TATATGCTAAGTATATACTT+TGG | - | chr5.4:65248113-65248132 | MS.gene80120:intron | 20.0% |
!! | TCAAACAAAATTGATGTATT+TGG | + | chr5.4:65248064-65248083 | None:intergenic | 20.0% |
!! | TCAAATTATAATCCCTTAAT+TGG | - | chr5.4:65251204-65251223 | MS.gene80120:intron | 20.0% |
!! | TCTCATTATTTCATATATAC+TGG | - | chr5.4:65249054-65249073 | MS.gene80120:intron | 20.0% |
!! | TGATAATTTAAATACAGGTT+GGG | - | chr5.4:65252250-65252269 | MS.gene80120:CDS | 20.0% |
!!! | AAATAATTTCTGGATACAAT+TGG | + | chr5.4:65249488-65249507 | None:intergenic | 20.0% |
!!! | ATTTTTATTTACCTGATTGT+TGG | - | chr5.4:65251116-65251135 | MS.gene80120:intron | 20.0% |
!!! | CAAAAAAAAGTTGATGTATT+TGG | - | chr5.4:65248025-65248044 | MS.gene80120:intron | 20.0% |
!!! | CACTTCGATTAATAATTTTA+GGG | - | chr5.4:65250314-65250333 | MS.gene80120:intron | 20.0% |
!!! | CGTTTTGTTAATAAAAGTTA+TGG | + | chr5.4:65248912-65248931 | None:intergenic | 20.0% |
!!! | CTTTTATTATAGGATATAAC+TGG | - | chr5.4:65248545-65248564 | MS.gene80120:intron | 20.0% |
!!! | TATCTAATAGGAAAATGTTT+TGG | - | chr5.4:65251030-65251049 | MS.gene80120:intron | 20.0% |
!!! | TTGATAATTTAAATACAGGT+TGG | - | chr5.4:65252249-65252268 | MS.gene80120:CDS | 20.0% |
!!! | TTGTCTTTTATTGTCAATTT+AGG | - | chr5.4:65247660-65247679 | MS.gene80120:intron | 20.0% |
!!! | TTTCAATTAAGAATCTTTTG+AGG | + | chr5.4:65247287-65247306 | None:intergenic | 20.0% |
!!! | TTTTCATTATACTATCACTA+GGG | + | chr5.4:65252287-65252306 | None:intergenic | 20.0% |
!!! | TTTTTCATTATACTATCACT+AGG | + | chr5.4:65252288-65252307 | None:intergenic | 20.0% |
!!! | TTTTTGCTTATATTTTGCAA+CGG | - | chr5.4:65247968-65247987 | MS.gene80120:intron | 20.0% |
! | AAAAGAAGTAAAGGAAAAAG+AGG | - | chr5.4:65250173-65250192 | MS.gene80120:intron | 25.0% |
! | AAAATGAAAAAACACTGAAG+AGG | + | chr5.4:65251283-65251302 | None:intergenic | 25.0% |
! | AAAGTAGTAGAATTTCAATC+AGG | + | chr5.4:65250933-65250952 | None:intergenic | 25.0% |
! | AAATGAAAAAACACTGAAGA+GGG | + | chr5.4:65251282-65251301 | None:intergenic | 25.0% |
! | AACCTTAAAATGCCAATTAA+CGG | + | chr5.4:65250718-65250737 | None:intergenic | 25.0% |
! | AAGTAGTAGAATTTCAATCA+GGG | + | chr5.4:65250932-65250951 | None:intergenic | 25.0% |
! | AATCGAAGTGCAAATAAAAT+TGG | + | chr5.4:65250304-65250323 | None:intergenic | 25.0% |
! | ACAAAAACTGAGAAAATGAA+AGG | + | chr5.4:65247626-65247645 | None:intergenic | 25.0% |
! | AGGCGATTAAAGTATAAAAT+TGG | + | chr5.4:65249252-65249271 | None:intergenic | 25.0% |
! | ATATAATCAAAAGTCAGTCA+AGG | - | chr5.4:65247886-65247905 | MS.gene80120:intron | 25.0% |
! | ATATATGTTGAGTAACATCA+TGG | + | chr5.4:65250683-65250702 | None:intergenic | 25.0% |
! | ATCAACTTGATCTATCTAAT+AGG | - | chr5.4:65251018-65251037 | MS.gene80120:intron | 25.0% |
! | ATTATAAATCCTGCTCAAAA+AGG | + | chr5.4:65251613-65251632 | None:intergenic | 25.0% |
! | GCATATAAATTTCCATCTTT+AGG | - | chr5.4:65250350-65250369 | MS.gene80120:intron | 25.0% |
! | GGATATCAAATAGGAATTAT+AGG | + | chr5.4:65250801-65250820 | None:intergenic | 25.0% |
! | GGTTGAATTGTATAGAATTA+AGG | + | chr5.4:65248858-65248877 | None:intergenic | 25.0% |
! | GTATTGTATCACATTTATTG+TGG | - | chr5.4:65250972-65250991 | MS.gene80120:intron | 25.0% |
! | TAAATGTGATACAATACAAC+AGG | + | chr5.4:65250969-65250988 | None:intergenic | 25.0% |
! | TAGTTAACTGAAGTTGTATT+GGG | - | chr5.4:65249692-65249711 | MS.gene80120:intron | 25.0% |
! | TATATGTTGAGTAACATCAT+GGG | + | chr5.4:65250682-65250701 | None:intergenic | 25.0% |
! | TATCTAAATGCTTCATATTG+TGG | + | chr5.4:65248602-65248621 | None:intergenic | 25.0% |
! | TATGGAAATAAGCAGAAAAA+AGG | + | chr5.4:65252181-65252200 | None:intergenic | 25.0% |
! | TTAGTTAACTGAAGTTGTAT+TGG | - | chr5.4:65249691-65249710 | MS.gene80120:intron | 25.0% |
! | TTCAATTATGTTGTTCTTTG+TGG | - | chr5.4:65247564-65247583 | MS.gene80120:CDS | 25.0% |
! | TTGACGAAATTTAAAAGGAA+CGG | - | chr5.4:65250864-65250883 | MS.gene80120:intron | 25.0% |
!! | CAACCATAATTTAGAACTAT+GGG | - | chr5.4:65248715-65248734 | MS.gene80120:intron | 25.0% |
!! | CTTTTGCTAATATTTTGCAA+CGG | - | chr5.4:65247840-65247859 | MS.gene80120:CDS | 25.0% |
!! | GATGTATTTGGTTCAAAATT+TGG | + | chr5.4:65248052-65248071 | None:intergenic | 25.0% |
!! | GCACTTCGATTAATAATTTT+AGG | - | chr5.4:65250313-65250332 | MS.gene80120:intron | 25.0% |
!! | GTACAATACCCTTTTATTAT+AGG | - | chr5.4:65248535-65248554 | MS.gene80120:intron | 25.0% |
!! | TAAAATATTTTGTCAGCACT+TGG | + | chr5.4:65251362-65251381 | None:intergenic | 25.0% |
!! | TAAAGAATATTTTCATGACG+AGG | - | chr5.4:65250386-65250405 | MS.gene80120:intron | 25.0% |
!! | TTCTTCTTTTGTAAAGTACA+CGG | - | chr5.4:65248469-65248488 | MS.gene80120:CDS | 25.0% |
!! | TTTCAAGCATTTTCATAGAA+GGG | - | chr5.4:65247359-65247378 | MS.gene80120:CDS | 25.0% |
!!! | AAAATGAAAGGCATTAAACA+AGG | + | chr5.4:65247614-65247633 | None:intergenic | 25.0% |
!!! | AAATTGTTTCTAAGCTATTC+TGG | + | chr5.4:65252210-65252229 | None:intergenic | 25.0% |
!!! | ATATAACTGGTTCTAAATTG+TGG | - | chr5.4:65248558-65248577 | MS.gene80120:intron | 25.0% |
!!! | GACTGACTTTTGATTATATA+TGG | + | chr5.4:65247885-65247904 | None:intergenic | 25.0% |
!!! | TATCCCATAGTTCTAAATTA+TGG | + | chr5.4:65248721-65248740 | None:intergenic | 25.0% |
!!! | TATTAGATAGATCAAGTTGA+TGG | + | chr5.4:65251019-65251038 | None:intergenic | 25.0% |
!!! | TGAAATTCTACTACTTTTGT+TGG | - | chr5.4:65250936-65250955 | MS.gene80120:intron | 25.0% |
AAATTAGATACACTTGGATG+AGG | + | chr5.4:65251998-65252017 | None:intergenic | 30.0% | |
AAGAACATCAACATTATCCT+TGG | + | chr5.4:65249196-65249215 | None:intergenic | 30.0% | |
ACATGGTGAACTATATGTAT+TGG | - | chr5.4:65248199-65248218 | MS.gene80120:intron | 30.0% | |
AGTGTTAACTTAATCTCACA+TGG | + | chr5.4:65251690-65251709 | None:intergenic | 30.0% | |
ATAAGCACTTAGATACTGTT+TGG | + | chr5.4:65249943-65249962 | None:intergenic | 30.0% | |
ATCATACTTCACTTGTTCTT+AGG | - | chr5.4:65252046-65252065 | MS.gene80120:intron | 30.0% | |
ATTATAATCCCTTAATTGGG+TGG | - | chr5.4:65251208-65251227 | MS.gene80120:intron | 30.0% | |
ATTCATTGTATTAAGGGTGA+AGG | - | chr5.4:65248173-65248192 | MS.gene80120:intron | 30.0% | |
CAGAGTGAAATATGTGAAAT+GGG | + | chr5.4:65250822-65250841 | None:intergenic | 30.0% | |
CTATATTTATTGGTCCATCA+TGG | + | chr5.4:65248359-65248378 | None:intergenic | 30.0% | |
CTCGTAAATCATCATTACTT+AGG | - | chr5.4:65248932-65248951 | MS.gene80120:intron | 30.0% | |
CTTGTACTACATAGTAATTC+AGG | - | chr5.4:65247712-65247731 | MS.gene80120:CDS | 30.0% | |
GATAATGTTGATGTTCTTCA+TGG | - | chr5.4:65249198-65249217 | MS.gene80120:CDS | 30.0% | |
GATACAATACAACAGGAAAA+TGG | + | chr5.4:65250962-65250981 | None:intergenic | 30.0% | |
GATTAAGTTAACACTTGTAG+AGG | - | chr5.4:65251695-65251714 | MS.gene80120:intron | 30.0% | |
GCAATCAAACCTTTATATTC+TGG | + | chr5.4:65250453-65250472 | None:intergenic | 30.0% | |
GCAGTCATTCATTGTATTAA+GGG | - | chr5.4:65248167-65248186 | MS.gene80120:intron | 30.0% | |
TACTCAGAAGAATATTCTGA+GGG | - | chr5.4:65251152-65251171 | MS.gene80120:intron | 30.0% | |
TAGATGGTTACTTCAACATT+TGG | - | chr5.4:65250039-65250058 | MS.gene80120:CDS | 30.0% | |
TCAAATAAGTCAATCTTGAC+AGG | - | chr5.4:65249977-65249996 | MS.gene80120:intron | 30.0% | |
TCTTAGGTGACTGTATATAT+GGG | - | chr5.4:65252062-65252081 | MS.gene80120:intron | 30.0% | |
TGCAGTCATTCATTGTATTA+AGG | - | chr5.4:65248166-65248185 | MS.gene80120:intron | 30.0% | |
TGTGAAATGGGATATCAAAT+AGG | + | chr5.4:65250810-65250829 | None:intergenic | 30.0% | |
TTAGTCTCATACCTTGTAAT+CGG | + | chr5.4:65250280-65250299 | None:intergenic | 30.0% | |
TTCTTAGGTGACTGTATATA+TGG | - | chr5.4:65252061-65252080 | MS.gene80120:intron | 30.0% | |
! | ATTACTTTAAGGAGGGTTTA+AGG | - | chr5.4:65248886-65248905 | MS.gene80120:intron | 30.0% |
! | ATTTTTGCTGCAATTCATTC+AGG | + | chr5.4:65249301-65249320 | None:intergenic | 30.0% |
! | GCAACCATAATTTAGAACTA+TGG | - | chr5.4:65248714-65248733 | MS.gene80120:intron | 30.0% |
! | GCGACAAATTCTAGTATTTT+CGG | - | chr5.4:65249321-65249340 | MS.gene80120:intron | 30.0% |
! | GTTTCAAGCATTTTCATAGA+AGG | - | chr5.4:65247358-65247377 | MS.gene80120:CDS | 30.0% |
! | TTCAAGCATTTTCATAGAAG+GGG | - | chr5.4:65247360-65247379 | MS.gene80120:CDS | 30.0% |
! | TTCTGAGTATTGTTCAAAGA+GGG | + | chr5.4:65247241-65247260 | None:intergenic | 30.0% |
! | TTGCTCTTTTACCTTCAATT+GGG | - | chr5.4:65247436-65247455 | MS.gene80120:intron | 30.0% |
! | TTTCTGAGTATTGTTCAAAG+AGG | + | chr5.4:65247242-65247261 | None:intergenic | 30.0% |
! | TTTTTACTTACCCCAATTGA+AGG | + | chr5.4:65247450-65247469 | None:intergenic | 30.0% |
!!! | AAGAATCTTTTGAGGTTTGA+AGG | + | chr5.4:65247279-65247298 | None:intergenic | 30.0% |
!!! | AAGTTAGTTTTCATTGTGCT+TGG | - | chr5.4:65251783-65251802 | MS.gene80120:intron | 30.0% |
!!! | ATCCTCTTTTTAAGTGATTC+AGG | + | chr5.4:65250114-65250133 | None:intergenic | 30.0% |
!!! | CAAGTACATTAGTTTTCTAG+GGG | + | chr5.4:65248148-65248167 | None:intergenic | 30.0% |
!!! | GCAAGTACATTAGTTTTCTA+GGG | + | chr5.4:65248149-65248168 | None:intergenic | 30.0% |
!!! | TATTTTTTATTTCACCGCGA+TGG | + | chr5.4:65248226-65248245 | None:intergenic | 30.0% |
!!! | TGCAAGTACATTAGTTTTCT+AGG | + | chr5.4:65248150-65248169 | None:intergenic | 30.0% |
!!! | TGTGTTTTTTGTTGTATTCC+AGG | - | chr5.4:65249005-65249024 | MS.gene80120:intron | 30.0% |
!!! | TTTTTAAGTGATTCAGGAGA+AGG | + | chr5.4:65250108-65250127 | None:intergenic | 30.0% |
AACAAACCTAACTTGAAGCT+CGG | + | chr5.4:65250255-65250274 | None:intergenic | 35.0% | |
AAGTGAGCAACAACTTGAAA+AGG | - | chr5.4:65250551-65250570 | MS.gene80120:CDS | 35.0% | |
ACATTATCCTTGGATGCATT+AGG | + | chr5.4:65249186-65249205 | None:intergenic | 35.0% | |
AGTTGTATTTATCTCCCTTC+TGG | + | chr5.4:65252506-65252525 | None:intergenic | 35.0% | |
ATACTGTTTGGAAGAGCTTA+TGG | + | chr5.4:65249931-65249950 | None:intergenic | 35.0% | |
ATGTTGATGTTCTTCATGGA+AGG | - | chr5.4:65249202-65249221 | MS.gene80120:CDS | 35.0% | |
ATTAAGGGTGAAGGTTAACA+TGG | - | chr5.4:65248182-65248201 | MS.gene80120:intron | 35.0% | |
CAATTGAAGGTAAAAGAGCA+AGG | + | chr5.4:65247437-65247456 | None:intergenic | 35.0% | |
CACTCTGCAATAAATAGTCA+GGG | - | chr5.4:65250835-65250854 | MS.gene80120:intron | 35.0% | |
CACTGCGAACTTTGATATTA+TGG | + | chr5.4:65248689-65248708 | None:intergenic | 35.0% | |
CATACAGTGTTTGTTTATGC+TGG | - | chr5.4:65247166-65247185 | MS.gene80120:CDS | 35.0% | |
CCTCCTTAAAGTAATACCTT+GGG | + | chr5.4:65248881-65248900 | None:intergenic | 35.0% | |
CCTTGAGACAAAAGAAGTAA+AGG | - | chr5.4:65250164-65250183 | MS.gene80120:intron | 35.0% | |
CTCATGGAAAAGAAATTGTC+AGG | - | chr5.4:65250583-65250602 | MS.gene80120:CDS | 35.0% | |
CTCCTGAATCACTTAAAAAG+AGG | - | chr5.4:65250109-65250128 | MS.gene80120:intron | 35.0% | |
CTCCTTAAAGTAATACCTTG+GGG | + | chr5.4:65248880-65248899 | None:intergenic | 35.0% | |
CTTAAAATGCCAATTAACGG+AGG | + | chr5.4:65250715-65250734 | None:intergenic | 35.0% | |
CTTACTCTTGCATAGAAATC+TGG | + | chr5.4:65252140-65252159 | None:intergenic | 35.0% | |
GAAAAAAACAAGGGCAATAG+AGG | - | chr5.4:65252302-65252321 | MS.gene80120:CDS | 35.0% | |
GAATGGAGATAAGCCAAAAT+CGG | - | chr5.4:65249876-65249895 | MS.gene80120:intron | 35.0% | |
GCAGAGTGAAATATGTGAAA+TGG | + | chr5.4:65250823-65250842 | None:intergenic | 35.0% | |
GTGAACTTCTATACGAAGAA+GGG | + | chr5.4:65252388-65252407 | None:intergenic | 35.0% | |
GTTGACCAAAAAACATGACA+AGG | + | chr5.4:65247523-65247542 | None:intergenic | 35.0% | |
TAGATGCTTGAGGTCTATTA+AGG | - | chr5.4:65249581-65249600 | MS.gene80120:CDS | 35.0% | |
TATATCAACCAAACCACCTA+AGG | - | chr5.4:65250137-65250156 | MS.gene80120:intron | 35.0% | |
TCACTCTGCAATAAATAGTC+AGG | - | chr5.4:65250834-65250853 | MS.gene80120:intron | 35.0% | |
TCAGGGAAATAGAATACAGA+AGG | + | chr5.4:65250915-65250934 | None:intergenic | 35.0% | |
TCCTTAAAGTAATACCTTGG+GGG | + | chr5.4:65248879-65248898 | None:intergenic | 35.0% | |
TCGCAACAAAATCACAATTG+CGG | - | chr5.4:65248634-65248653 | MS.gene80120:intron | 35.0% | |
TGGTCAACTGAATCTGTATT+TGG | - | chr5.4:65247535-65247554 | MS.gene80120:CDS | 35.0% | |
TGTTCACACTTTACACACTT+CGG | - | chr5.4:65248802-65248821 | MS.gene80120:intron | 35.0% | |
TTCTTACTACCTCCGTTAAT+TGG | - | chr5.4:65250703-65250722 | MS.gene80120:intron | 35.0% | |
TTCTTGTTAGTTCACCATGA+TGG | - | chr5.4:65248342-65248361 | MS.gene80120:intron | 35.0% | |
! | AACTTTGATCTGAAGTGTCA+GGG | - | chr5.4:65251527-65251546 | MS.gene80120:intron | 35.0% |
! | ACACTTCGGTTATTTAGTTC+AGG | - | chr5.4:65248816-65248835 | MS.gene80120:intron | 35.0% |
! | ATGTCCGAGAAAGATGATTT+TGG | - | chr5.4:65252417-65252436 | MS.gene80120:CDS | 35.0% |
! | CCAAGGTATTACTTTAAGGA+GGG | - | chr5.4:65248879-65248898 | MS.gene80120:intron | 35.0% |
! | CCTTTACTTCTTTTGTCTCA+AGG | + | chr5.4:65250167-65250186 | None:intergenic | 35.0% |
! | CTCCGTTAATTGGCATTTTA+AGG | - | chr5.4:65250713-65250732 | MS.gene80120:intron | 35.0% |
! | CTTGCTCTTTTACCTTCAAT+TGG | - | chr5.4:65247435-65247454 | MS.gene80120:intron | 35.0% |
! | GAAGACTACTTTGAAGGTAA+GGG | - | chr5.4:65251954-65251973 | MS.gene80120:intron | 35.0% |
! | TAACTTTGATCTGAAGTGTC+AGG | - | chr5.4:65251526-65251545 | MS.gene80120:intron | 35.0% |
! | TGAAGACTACTTTGAAGGTA+AGG | - | chr5.4:65251953-65251972 | MS.gene80120:intron | 35.0% |
! | TGCTCTTTTACCTTCAATTG+GGG | - | chr5.4:65247437-65247456 | MS.gene80120:intron | 35.0% |
! | TTCACAGGTAACTTAGCTTT+AGG | + | chr5.4:65251937-65251956 | None:intergenic | 35.0% |
! | TTTTGTAAAGTACACGGCAT+TGG | - | chr5.4:65248475-65248494 | MS.gene80120:CDS | 35.0% |
!! | AGGTTTGTTATCCGATTACA+AGG | - | chr5.4:65250266-65250285 | MS.gene80120:intron | 35.0% |
!! | ATAGTAGTCTTATGAAGCAC+TGG | - | chr5.4:65251389-65251408 | MS.gene80120:intron | 35.0% |
!! | TCTTCTAGGGTTATTACAAC+CGG | + | chr5.4:65249633-65249652 | None:intergenic | 35.0% |
!!! | CTGAACCTTGTCATGTTTTT+TGG | - | chr5.4:65247515-65247534 | MS.gene80120:intron | 35.0% |
AAAGAGGATGATTCACTGCA+CGG | - | chr5.4:65250189-65250208 | MS.gene80120:intron | 40.0% | |
AAATCCTGCTCAAAAAGGAC+TGG | + | chr5.4:65251608-65251627 | None:intergenic | 40.0% | |
AACCTATCCTTGAGAACGAA+TGG | - | chr5.4:65249859-65249878 | MS.gene80120:intron | 40.0% | |
AATGGTTGCATTCAACATGC+AGG | - | chr5.4:65251245-65251264 | MS.gene80120:intron | 40.0% | |
ACAAACCTAACTTGAAGCTC+GGG | + | chr5.4:65250254-65250273 | None:intergenic | 40.0% | |
ACAAGGGTAATGTCATGTCA+TGG | + | chr5.4:65249035-65249054 | None:intergenic | 40.0% | |
ACACAGATCAGAACAAGTAC+AGG | + | chr5.4:65248990-65249009 | None:intergenic | 40.0% | |
ACCTGTGAAGACTACTTTGA+AGG | - | chr5.4:65251948-65251967 | MS.gene80120:intron | 40.0% | |
ACCTTCAAAGTAGTCTTCAC+AGG | + | chr5.4:65251952-65251971 | None:intergenic | 40.0% | |
ACTCTTGCATAGAAATCTGG+AGG | + | chr5.4:65252137-65252156 | None:intergenic | 40.0% | |
AGGTGTAAGGGTAATTGAGT+TGG | - | chr5.4:65249152-65249171 | MS.gene80120:CDS | 40.0% | |
ATTCATGCTGGGAAGTCAAA+AGG | - | chr5.4:65250474-65250493 | MS.gene80120:CDS | 40.0% | |
ATTGTGCTTGGTTCCATTGT+AGG | - | chr5.4:65251795-65251814 | MS.gene80120:intron | 40.0% | |
CACGTAGCTCCAGAATATAA+AGG | - | chr5.4:65250441-65250460 | MS.gene80120:intron | 40.0% | |
CCAAACATGCTTACCTGTTT+CGG | - | chr5.4:65252443-65252462 | MS.gene80120:CDS | 40.0% | |
CCAAACTGTTTCCCTAAAGA+TGG | + | chr5.4:65250365-65250384 | None:intergenic | 40.0% | |
CCAGTCGTTAAGAGAAAATC+TGG | + | chr5.4:65251892-65251911 | None:intergenic | 40.0% | |
CCATGAATCCACCCAATTAA+GGG | + | chr5.4:65251219-65251238 | None:intergenic | 40.0% | |
CCCTCCTTAAAGTAATACCT+TGG | + | chr5.4:65248882-65248901 | None:intergenic | 40.0% | |
CGTGAACTTCTATACGAAGA+AGG | + | chr5.4:65252389-65252408 | None:intergenic | 40.0% | |
CTGTATATATGGGAGAAGGA+TGG | - | chr5.4:65252072-65252091 | MS.gene80120:intron | 40.0% | |
CTTATCTCCATTCGTTCTCA+AGG | + | chr5.4:65249869-65249888 | None:intergenic | 40.0% | |
CTTTGTCGCATCAGAATTTC+CGG | - | chr5.4:65249611-65249630 | MS.gene80120:CDS | 40.0% | |
GAAAAGGCTGCTATAACTCA+TGG | - | chr5.4:65250567-65250586 | MS.gene80120:CDS | 40.0% | |
GAACTATGGGATACACCATA+TGG | - | chr5.4:65248728-65248747 | MS.gene80120:intron | 40.0% | |
GCAGTCATATATGTCACTGT+TGG | - | chr5.4:65251493-65251512 | MS.gene80120:intron | 40.0% | |
GCCACCAAAATCATCTTTCT+CGG | + | chr5.4:65252424-65252443 | None:intergenic | 40.0% | |
GGAGACATACTATATGTACC+TGG | - | chr5.4:65250060-65250079 | MS.gene80120:CDS | 40.0% | |
GGATCAAAGACCTCATTATC+CGG | + | chr5.4:65251916-65251935 | None:intergenic | 40.0% | |
GGTCACAATTCCTATCTAAC+CGG | - | chr5.4:65249075-65249094 | MS.gene80120:intron | 40.0% | |
GTCACAATTCCTATCTAACC+GGG | - | chr5.4:65249076-65249095 | MS.gene80120:CDS | 40.0% | |
GTGACTGTATATATGGGAGA+AGG | - | chr5.4:65252068-65252087 | MS.gene80120:intron | 40.0% | |
GTTTGATTGCCATTCATGCT+GGG | - | chr5.4:65250463-65250482 | MS.gene80120:CDS | 40.0% | |
TATATGTCACTGTTGGACAC+TGG | - | chr5.4:65251500-65251519 | MS.gene80120:intron | 40.0% | |
TCAAATACCTCGTTCCATGT+AGG | + | chr5.4:65252339-65252358 | None:intergenic | 40.0% | |
TCCATGAATCCACCCAATTA+AGG | + | chr5.4:65251220-65251239 | None:intergenic | 40.0% | |
TCTATACAATTCAACCCCCA+AGG | - | chr5.4:65248862-65248881 | MS.gene80120:intron | 40.0% | |
TGGAGTAAGATGGTCTTCTA+GGG | + | chr5.4:65249646-65249665 | None:intergenic | 40.0% | |
TTAACTAACCTCAGCCACTT+TGG | + | chr5.4:65249679-65249698 | None:intergenic | 40.0% | |
TTCATATTGTGGCCACAATG+TGG | + | chr5.4:65248591-65248610 | None:intergenic | 40.0% | |
TTGTGCTTGGTTCCATTGTA+GGG | - | chr5.4:65251796-65251815 | MS.gene80120:intron | 40.0% | |
! | AAGCTATTCTGGAGAGCTTA+TGG | + | chr5.4:65252199-65252218 | None:intergenic | 40.0% |
! | ACATGGTAACTTGTGCGAAA+AGG | + | chr5.4:65251673-65251692 | None:intergenic | 40.0% |
! | ACCCCCAAGGTATTACTTTA+AGG | - | chr5.4:65248875-65248894 | MS.gene80120:intron | 40.0% |
! | ACTTTGATCTGAAGTGTCAG+GGG | - | chr5.4:65251528-65251547 | MS.gene80120:intron | 40.0% |
! | CATGGAATGTTTAGAGCCAA+TGG | - | chr5.4:65251844-65251863 | MS.gene80120:intron | 40.0% |
! | CATGGTAACTTGTGCGAAAA+GGG | + | chr5.4:65251672-65251691 | None:intergenic | 40.0% |
! | CCAGATTTTCTCTTAACGAC+TGG | - | chr5.4:65251889-65251908 | MS.gene80120:intron | 40.0% |
! | CCATCTTTAGGGAAACAGTT+TGG | - | chr5.4:65250362-65250381 | MS.gene80120:intron | 40.0% |
! | CCCAAGGTATTACTTTAAGG+AGG | - | chr5.4:65248878-65248897 | MS.gene80120:intron | 40.0% |
! | CTATATGTATTGGTCCATCG+CGG | - | chr5.4:65248209-65248228 | MS.gene80120:intron | 40.0% |
! | CTTGAAGATCTGGAGTAAGA+TGG | + | chr5.4:65249656-65249675 | None:intergenic | 40.0% |
! | GAATGTTTAGAGCCAATGGA+GGG | - | chr5.4:65251848-65251867 | MS.gene80120:intron | 40.0% |
! | GATAAGCCAAAATCGGCTTA+TGG | - | chr5.4:65249883-65249902 | MS.gene80120:intron | 40.0% |
! | GTGATGTGACTTGTCTGATT+CGG | + | chr5.4:65250421-65250440 | None:intergenic | 40.0% |
! | TAAATACAGGTTGGGATTGC+TGG | - | chr5.4:65252258-65252277 | MS.gene80120:CDS | 40.0% |
! | TCCGAGAAAGATGATTTTGG+TGG | - | chr5.4:65252420-65252439 | MS.gene80120:CDS | 40.0% |
! | TTTGTCTCAAGGTACTCCTT+AGG | + | chr5.4:65250156-65250175 | None:intergenic | 40.0% |
!! | ATTCTGAGGGTGTTTCCAAA+AGG | - | chr5.4:65251165-65251184 | MS.gene80120:intron | 40.0% |
!! | CTAGTATTTTCGGTGCAATC+TGG | - | chr5.4:65249331-65249350 | MS.gene80120:intron | 40.0% |
!! | CTTTATATTCTGGAGCTACG+TGG | + | chr5.4:65250443-65250462 | None:intergenic | 40.0% |
!! | GGGTAATTGAGTTGGACTTA+TGG | - | chr5.4:65249160-65249179 | MS.gene80120:CDS | 40.0% |
!! | GTTTGTATTTGTGCCGTTTC+TGG | + | chr5.4:65251423-65251442 | None:intergenic | 40.0% |
!! | TTTTCTCTTAACGACTGGTC+CGG | - | chr5.4:65251894-65251913 | MS.gene80120:intron | 40.0% |
!!! | TTTTGACTTCCCAGCATGAA+TGG | + | chr5.4:65250475-65250494 | None:intergenic | 40.0% |
AAAGCCAATGCGATGCCATA+TGG | + | chr5.4:65248746-65248765 | None:intergenic | 45.0% | |
AAATAGATCCGGAGAAAGCG+AGG | - | chr5.4:65250517-65250536 | MS.gene80120:CDS | 45.0% | |
AACATAACCACACCCTCCAT+TGG | + | chr5.4:65251863-65251882 | None:intergenic | 45.0% | |
AAGAGGGTCTTGATCTCTTG+TGG | + | chr5.4:65247225-65247244 | None:intergenic | 45.0% | |
AAGCATCTAATGAGCTCCAC+AGG | + | chr5.4:65249570-65249589 | None:intergenic | 45.0% | |
AGATCACTTTGGCTGATGCA+TGG | - | chr5.4:65251826-65251845 | MS.gene80120:intron | 45.0% | |
CAAAAGGAGGAATAGACGCA+TGG | - | chr5.4:65250490-65250509 | MS.gene80120:CDS | 45.0% | |
CAAGGGCAATAGAGGATAAC+TGG | - | chr5.4:65252310-65252329 | MS.gene80120:CDS | 45.0% | |
CCGAAACAGGTAAGCATGTT+TGG | + | chr5.4:65252446-65252465 | None:intergenic | 45.0% | |
CCTATAGCAGACCAACAATC+AGG | + | chr5.4:65251130-65251149 | None:intergenic | 45.0% | |
CGCATGGCTCAAAATAGATC+CGG | - | chr5.4:65250506-65250525 | MS.gene80120:CDS | 45.0% | |
CGGAAATTCTGATGCGACAA+AGG | + | chr5.4:65249613-65249632 | None:intergenic | 45.0% | |
CTCCATTCGTTCTCAAGGAT+AGG | + | chr5.4:65249864-65249883 | None:intergenic | 45.0% | |
CTGGAGTAAGATGGTCTTCT+AGG | + | chr5.4:65249647-65249666 | None:intergenic | 45.0% | |
CTTATGGCCTAATGCATCCA+AGG | - | chr5.4:65249176-65249195 | MS.gene80120:CDS | 45.0% | |
GGTTTGATTGCCATTCATGC+TGG | - | chr5.4:65250462-65250481 | MS.gene80120:CDS | 45.0% | |
GTGGATTCATGGAGCTCAAA+TGG | - | chr5.4:65251227-65251246 | MS.gene80120:intron | 45.0% | |
TACACCATATGGCATCGCAT+TGG | - | chr5.4:65248739-65248758 | MS.gene80120:intron | 45.0% | |
TCCAGATCTTCAAGCCAAAG+TGG | - | chr5.4:65249662-65249681 | MS.gene80120:intron | 45.0% | |
TGGAGCTCATTAGATGCTTG+AGG | - | chr5.4:65249571-65249590 | MS.gene80120:CDS | 45.0% | |
TGTGCTTGGTTCCATTGTAG+GGG | - | chr5.4:65251797-65251816 | MS.gene80120:intron | 45.0% | |
TTGGTTCCATTGTAGGGGTA+TGG | - | chr5.4:65251802-65251821 | MS.gene80120:intron | 45.0% | |
! | AAGGTACTCCTTAGGTGGTT+TGG | + | chr5.4:65250148-65250167 | None:intergenic | 45.0% |
! | ACTGGCTTAGACACCAGAAA+CGG | - | chr5.4:65251407-65251426 | MS.gene80120:intron | 45.0% |
! | CCCTTAATTGGGTGGATTCA+TGG | - | chr5.4:65251216-65251235 | MS.gene80120:intron | 45.0% |
! | CCTGATTGTTGGTCTGCTAT+AGG | - | chr5.4:65251127-65251146 | MS.gene80120:intron | 45.0% |
! | GAGTCAATGCGAGTACCTTT+TGG | + | chr5.4:65251183-65251202 | None:intergenic | 45.0% |
! | GGAATGTTTAGAGCCAATGG+AGG | - | chr5.4:65251847-65251866 | MS.gene80120:intron | 45.0% |
! | GTAAAGTACACGGCATTGGA+GGG | - | chr5.4:65248479-65248498 | MS.gene80120:CDS | 45.0% |
! | TAGGACATTGACTACTCCTG+TGG | - | chr5.4:65249551-65249570 | MS.gene80120:CDS | 45.0% |
! | TGGTTCCATTGTAGGGGTAT+GGG | - | chr5.4:65251803-65251822 | MS.gene80120:intron | 45.0% |
! | TGTAAAGTACACGGCATTGG+AGG | - | chr5.4:65248478-65248497 | MS.gene80120:CDS | 45.0% |
!! | ATACGAAGAAGGGCTAGTTC+CGG | + | chr5.4:65252378-65252397 | None:intergenic | 45.0% |
!! | CATTTTCATAGAAGGGGTGC+TGG | - | chr5.4:65247366-65247385 | MS.gene80120:CDS | 45.0% |
!! | GTCTGTCCATAAGCCGATTT+TGG | + | chr5.4:65249892-65249911 | None:intergenic | 45.0% |
!!! | TTTTTTTGTTTTTTATTTTA+TGG | - | chr5.4:65248423-65248442 | MS.gene80120:CDS | 5.0% |
ACCTGGCTCAGAAAGCTTGA+AGG | - | chr5.4:65250077-65250096 | MS.gene80120:CDS | 50.0% | |
AGGATAACTGGCTGCCTACA+TGG | - | chr5.4:65252322-65252341 | MS.gene80120:CDS | 50.0% | |
AGTTTCCCTGCATAGCCAGA+AGG | - | chr5.4:65252488-65252507 | MS.gene80120:CDS | 50.0% | |
ATGTCATGTCATGGTGCACC+TGG | + | chr5.4:65249026-65249045 | None:intergenic | 50.0% | |
CATGCTGGGAAGTCAAAAGG+AGG | - | chr5.4:65250477-65250496 | MS.gene80120:CDS | 50.0% | |
CCTGCTCTCGTAGAGAAGAA+GGG | + | chr5.4:65251309-65251328 | None:intergenic | 50.0% | |
CTAGTTCCGGAACAGTAAGC+GGG | + | chr5.4:65252365-65252384 | None:intergenic | 50.0% | |
CTCTGCAACGCTTTCACGAT+TGG | + | chr5.4:65249132-65249151 | None:intergenic | 50.0% | |
CTTATACGCCTCGCTTTCTC+CGG | + | chr5.4:65250528-65250547 | None:intergenic | 50.0% | |
GATCTCCCATACCCCTACAA+TGG | + | chr5.4:65251811-65251830 | None:intergenic | 50.0% | |
GCTAGTTCCGGAACAGTAAG+CGG | + | chr5.4:65252366-65252385 | None:intergenic | 50.0% | |
GCTGTATCAGCTGCATTTGC+TGG | - | chr5.4:65248656-65248675 | MS.gene80120:intron | 50.0% | |
GCTTACCTGTTTCGGAGCTA+AGG | - | chr5.4:65252451-65252470 | MS.gene80120:CDS | 50.0% | |
GGATGATTCACTGCACGGAA+AGG | - | chr5.4:65250194-65250213 | MS.gene80120:intron | 50.0% | |
GTTTCCCTGCATAGCCAGAA+GGG | - | chr5.4:65252489-65252508 | MS.gene80120:CDS | 50.0% | |
TCCTGCTCTCGTAGAGAAGA+AGG | + | chr5.4:65251310-65251329 | None:intergenic | 50.0% | |
TCCTTCAAGCTTTCTGAGCC+AGG | + | chr5.4:65250081-65250100 | None:intergenic | 50.0% | |
TCTTCAAGCCAAAGTGGCTG+AGG | - | chr5.4:65249668-65249687 | MS.gene80120:intron | 50.0% | |
TGAGTTCCCGCTTACTGTTC+CGG | - | chr5.4:65252356-65252375 | MS.gene80120:CDS | 50.0% | |
TTCACTGCACGGAAAGGCTT+CGG | - | chr5.4:65250200-65250219 | MS.gene80120:intron | 50.0% | |
TTCTTCTCTACGAGAGCAGG+AGG | - | chr5.4:65251309-65251328 | MS.gene80120:intron | 50.0% | |
! | AACGACTGGTCCGGATAATG+AGG | - | chr5.4:65251903-65251922 | MS.gene80120:intron | 50.0% |
! | AAGCGTTGCAGAGAGGTGTA+AGG | - | chr5.4:65249139-65249158 | MS.gene80120:CDS | 50.0% |
! | AGCGTTGCAGAGAGGTGTAA+GGG | - | chr5.4:65249140-65249159 | MS.gene80120:CDS | 50.0% |
! | AGGGGTATGGGAGATCACTT+TGG | - | chr5.4:65251815-65251834 | MS.gene80120:intron | 50.0% |
! | ATCTCCCTTCTGGCTATGCA+GGG | + | chr5.4:65252496-65252515 | None:intergenic | 50.0% |
! | CAGCTGATTCCCGGTTAGAT+AGG | + | chr5.4:65249088-65249107 | None:intergenic | 50.0% |
! | CTGAAGTGTCAGGGGTACAT+GGG | - | chr5.4:65251536-65251555 | MS.gene80120:intron | 50.0% |
! | GAGATCCCGAGCTTCAAGTT+AGG | - | chr5.4:65250246-65250265 | MS.gene80120:intron | 50.0% |
! | GTCAGCACTTGGTAGCTTGA+AGG | + | chr5.4:65251351-65251370 | None:intergenic | 50.0% |
! | GTCTCAAGGTACTCCTTAGG+TGG | + | chr5.4:65250153-65250172 | None:intergenic | 50.0% |
! | TATCTCCCTTCTGGCTATGC+AGG | + | chr5.4:65252497-65252516 | None:intergenic | 50.0% |
! | TCTGAAGTGTCAGGGGTACA+TGG | - | chr5.4:65251535-65251554 | MS.gene80120:intron | 50.0% |
! | TTTAGAGCCAATGGAGGGTG+TGG | - | chr5.4:65251853-65251872 | MS.gene80120:intron | 50.0% |
!! | ATCGTGAAAGCGTTGCAGAG+AGG | - | chr5.4:65249132-65249151 | MS.gene80120:CDS | 50.0% |
!! | GCCACTTTGGCTTGAAGATC+TGG | + | chr5.4:65249666-65249685 | None:intergenic | 50.0% |
!! | TGAGCCAGTCCTTTTTGAGC+AGG | - | chr5.4:65251601-65251620 | MS.gene80120:intron | 50.0% |
CCACTCCTTAGCTCCGAAAC+AGG | + | chr5.4:65252459-65252478 | None:intergenic | 55.0% | |
CCCTTCTTCTCTACGAGAGC+AGG | - | chr5.4:65251306-65251325 | MS.gene80120:intron | 55.0% | |
CCTGTTTCGGAGCTAAGGAG+TGG | - | chr5.4:65252456-65252475 | MS.gene80120:CDS | 55.0% | |
TCACTGCACGGAAAGGCTTC+GGG | - | chr5.4:65250201-65250220 | MS.gene80120:intron | 55.0% | |
TGTGGTCCACAGCCACATTG+TGG | - | chr5.4:65248576-65248595 | MS.gene80120:intron | 55.0% | |
TTGTGGCCACAATGTGGCTG+TGG | + | chr5.4:65248585-65248604 | None:intergenic | 55.0% | |
! | GTCACTGCTCAGCTGATTCC+CGG | + | chr5.4:65249097-65249116 | None:intergenic | 55.0% |
CTGGCTGCCTACATGGAACG+AGG | - | chr5.4:65252329-65252348 | MS.gene80120:CDS | 60.0% | |
TTCGGGCGACGATGAAGCGT+GGG | - | chr5.4:65250218-65250237 | MS.gene80120:intron | 60.0% | |
CGACGATGAAGCGTGGGGGA+CGG | - | chr5.4:65250224-65250243 | MS.gene80120:intron | 65.0% | |
CTTCGGGCGACGATGAAGCG+TGG | - | chr5.4:65250217-65250236 | MS.gene80120:intron | 65.0% | |
TCGGGCGACGATGAAGCGTG+GGG | - | chr5.4:65250219-65250238 | MS.gene80120:intron | 65.0% | |
CGGGCGACGATGAAGCGTGG+GGG | - | chr5.4:65250220-65250239 | MS.gene80120:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 65247153 | 65252527 | 65247153 | ID=MS.gene80120 |
chr5.4 | mRNA | 65247153 | 65252527 | 65247153 | ID=MS.gene80120.t1;Parent=MS.gene80120 |
chr5.4 | exon | 65252222 | 65252527 | 65252222 | ID=MS.gene80120.t1.exon1;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65252222 | 65252527 | 65252222 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65250457 | 65250653 | 65250457 | ID=MS.gene80120.t1.exon2;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65250457 | 65250653 | 65250457 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65249991 | 65250126 | 65249991 | ID=MS.gene80120.t1.exon3;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65249991 | 65250126 | 65249991 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65249393 | 65249638 | 65249393 | ID=MS.gene80120.t1.exon4;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65249393 | 65249638 | 65249393 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65249076 | 65249308 | 65249076 | ID=MS.gene80120.t1.exon5;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65249076 | 65249308 | 65249076 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65248414 | 65248531 | 65248414 | ID=MS.gene80120.t1.exon6;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65248414 | 65248531 | 65248414 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65247711 | 65247863 | 65247711 | ID=MS.gene80120.t1.exon7;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65247711 | 65247863 | 65247711 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65247526 | 65247612 | 65247526 | ID=MS.gene80120.t1.exon8;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65247526 | 65247612 | 65247526 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
chr5.4 | exon | 65247153 | 65247413 | 65247153 | ID=MS.gene80120.t1.exon9;Parent=MS.gene80120.t1 |
chr5.4 | CDS | 65247153 | 65247413 | 65247153 | ID=cds.MS.gene80120.t1;Parent=MS.gene80120.t1 |
Gene Sequence |
Protein sequence |