Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80740.t1 | XP_003604901.1 | 98.5 | 476 | 7 | 0 | 1 | 476 | 1 | 476 | 5.50E-271 | 943 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80740.t1 | Q7X9A0 | 80.8 | 479 | 86 | 5 | 1 | 476 | 1 | 476 | 1.3e-223 | 776.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80740.t1 | G7JTD2 | 98.5 | 476 | 7 | 0 | 1 | 476 | 1 | 476 | 4.0e-271 | 943.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050772 | MS.gene80740 | 0.812155 | 4.89E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene80740 | 0.827383 | 1.61E-54 | -1.69E-46 |
| MS.gene053213 | MS.gene80740 | 0.825209 | 5.31E-54 | -1.69E-46 |
| MS.gene053286 | MS.gene80740 | 0.82611 | 3.25E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene80740 | 0.812078 | 5.08E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene80740 | 0.80293 | 4.44E-49 | -1.69E-46 |
| MS.gene057775 | MS.gene80740 | 0.822011 | 2.98E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80740.t1 | MTR_4g021210 | 98.529 | 476 | 7 | 0 | 1 | 476 | 1 | 476 | 0.0 | 972 |
| MS.gene80740.t1 | MTR_5g080450 | 81.933 | 476 | 85 | 1 | 1 | 476 | 1 | 475 | 0.0 | 829 |
| MS.gene80740.t1 | MTR_3g068030 | 81.963 | 438 | 76 | 3 | 1 | 437 | 1 | 436 | 0.0 | 745 |
| MS.gene80740.t1 | MTR_3g068030 | 83.452 | 423 | 68 | 2 | 16 | 437 | 1 | 422 | 0.0 | 737 |
| MS.gene80740.t1 | MTR_2g105480 | 54.110 | 292 | 127 | 6 | 134 | 419 | 123 | 413 | 2.48e-109 | 330 |
| MS.gene80740.t1 | MTR_2g105480 | 60.262 | 229 | 87 | 4 | 134 | 359 | 123 | 350 | 3.67e-97 | 297 |
| MS.gene80740.t1 | MTR_2g105480 | 65.730 | 178 | 57 | 4 | 134 | 308 | 123 | 299 | 1.27e-76 | 243 |
| MS.gene80740.t1 | MTR_0373s0020 | 96.429 | 28 | 1 | 0 | 439 | 466 | 11 | 38 | 2.95e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80740.t1 | AT2G39730 | 78.826 | 477 | 97 | 2 | 1 | 476 | 1 | 474 | 0.0 | 786 |
| MS.gene80740.t1 | AT2G39730 | 77.852 | 447 | 95 | 2 | 1 | 446 | 1 | 444 | 0.0 | 724 |
| MS.gene80740.t1 | AT2G39730 | 78.685 | 441 | 90 | 2 | 1 | 440 | 1 | 438 | 0.0 | 722 |
| MS.gene80740.t1 | AT1G73110 | 51.724 | 319 | 145 | 7 | 107 | 419 | 15 | 330 | 1.33e-110 | 330 |
| MS.gene80740.t1 | AT1G73110 | 52.564 | 312 | 139 | 7 | 114 | 419 | 119 | 427 | 2.95e-109 | 330 |
Find 121 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTGCACCTGCATTTA+TGG | 0.088800 | 4.4:+80633523 | MS.gene80740:CDS |
| TATTAAGATTCCTCTCATTT+TGG | 0.116167 | 4.4:+80633592 | MS.gene80740:CDS |
| GAGTTTGTCTGGTAACTTTA+AGG | 0.180254 | 4.4:+80632794 | MS.gene80740:CDS |
| TCTTCACATTCTCTTGTTCT+TGG | 0.192672 | 4.4:-80634876 | None:intergenic |
| GAAGGGTCAGCGCAACCTTC+TGG | 0.200974 | 4.4:-80635152 | None:intergenic |
| ATGAGAGGAATCTTAATATT+TGG | 0.205578 | 4.4:-80633587 | None:intergenic |
| TCTCCGGCACTCATCATTAT+AGG | 0.240969 | 4.4:-80633836 | None:intergenic |
| GTCTGGTAACTTTAAGGTTT+CGG | 0.299605 | 4.4:+80632800 | MS.gene80740:CDS |
| TTGTACCTGTGCCATGTTAA+TGG | 0.318352 | 4.4:-80632054 | None:intergenic |
| TGATATGTTCAGGTACAATA+TGG | 0.328301 | 4.4:+80633481 | MS.gene80740:intron |
| CTTTGCCTAATCAACTTTGC+AGG | 0.332302 | 4.4:-80633884 | None:intergenic |
| AGCTTGTCAATAGTCATCTT+TGG | 0.340251 | 4.4:-80634829 | None:intergenic |
| TCTTTGCCAAGATGGGAATA+AGG | 0.350452 | 4.4:+80633663 | MS.gene80740:CDS |
| GCAACTTCCATCGTCACTTC+TGG | 0.351528 | 4.4:-80635198 | None:intergenic |
| AATGATGAGTGCCGGAGAAT+TGG | 0.354739 | 4.4:+80633841 | MS.gene80740:CDS |
| ATACGTCCATCACGAATTAA+AGG | 0.360045 | 4.4:-80634157 | None:intergenic |
| ATCAAGACTGGAAACTTCTA+TGG | 0.360535 | 4.4:+80634961 | MS.gene80740:CDS |
| TCCAGCCCATCTGTCCTTTG+AGG | 0.369839 | 4.4:-80632853 | None:intergenic |
| CTCTTCTTTGTTGTACATAC+CGG | 0.377301 | 4.4:-80634080 | None:intergenic |
| GGGCGCCTACTCGTGATGAT+AGG | 0.379460 | 4.4:+80634194 | MS.gene80740:CDS |
| TCGCAGAACTAGCTTTCTTA+AGG | 0.379560 | 4.4:-80632758 | None:intergenic |
| CTCCGGCACTCATCATTATA+GGG | 0.391535 | 4.4:-80633835 | None:intergenic |
| AGTTACCAGACAAACTCTTC+TGG | 0.399477 | 4.4:-80632788 | None:intergenic |
| TCATTTCCAGTGACGATGAT+AGG | 0.406761 | 4.4:-80634115 | None:intergenic |
| AAGGGTCAGCGCAACCTTCT+GGG | 0.410738 | 4.4:-80635151 | None:intergenic |
| CCTACCAATGTTCAACTTCC+CGG | 0.413313 | 4.4:+80634061 | MS.gene80740:CDS |
| AAGATTGTCGACACATTCCC+TGG | 0.416886 | 4.4:+80634274 | MS.gene80740:CDS |
| ATCTTTGGTTGCTCAAAAGT+TGG | 0.417648 | 4.4:-80634814 | None:intergenic |
| TGAGGGTTGCATTTACCATC+TGG | 0.421559 | 4.4:-80634021 | None:intergenic |
| TTTCAAGCTCCAACGGATGC+TGG | 0.424875 | 4.4:+80632942 | MS.gene80740:CDS |
| GAGAGCCTGCAAAGTTGATT+AGG | 0.432564 | 4.4:+80633879 | MS.gene80740:CDS |
| GAAGTCAGGAATTGGATATC+TGG | 0.433568 | 4.4:+80634739 | MS.gene80740:CDS |
| GTAACTTCTGTGACAATTGT+TGG | 0.434618 | 4.4:+80632029 | MS.gene80740:CDS |
| ATGACGATGAAGTCAGGAAT+TGG | 0.439434 | 4.4:+80634731 | MS.gene80740:CDS |
| TCCAGCCAGAAGAGTTTGTC+TGG | 0.441643 | 4.4:+80632783 | MS.gene80740:CDS |
| AATATGGACAACACAATAGA+TGG | 0.441782 | 4.4:+80633497 | MS.gene80740:CDS |
| ATCTTGACAATGTCATCCTT+AGG | 0.455344 | 4.4:-80634256 | None:intergenic |
| GGCTTACCAATTGACTGTCC+AGG | 0.457458 | 4.4:-80634292 | None:intergenic |
| TTCCCCTTGTGATATCCTGT+TGG | 0.457655 | 4.4:-80632899 | None:intergenic |
| TACCTCAGTCAGGCAGCTCT+TGG | 0.463568 | 4.4:+80634919 | MS.gene80740:CDS |
| ATTTCCACTTTCCAATTCTC+CGG | 0.468242 | 4.4:-80633852 | None:intergenic |
| CAACCTTCTGGGACAGGTAA+AGG | 0.470524 | 4.4:-80635140 | None:intergenic |
| ACATTCCCTGGACAGTCAAT+TGG | 0.470564 | 4.4:+80634286 | MS.gene80740:CDS |
| CAGGATATCACAAGGGGAAA+GGG | 0.479596 | 4.4:+80632903 | MS.gene80740:CDS |
| ACCTCAAAGGACAGATGGGC+TGG | 0.482103 | 4.4:+80632852 | MS.gene80740:CDS |
| TTGGGCATTTGGGGAGGCAA+AGG | 0.485012 | 4.4:+80633611 | MS.gene80740:CDS |
| GAGTGTATGACGATGAAGTC+AGG | 0.487351 | 4.4:+80634725 | MS.gene80740:CDS |
| GCGTCCGACATTATCAGAAA+AGG | 0.491800 | 4.4:+80633917 | MS.gene80740:CDS |
| TTCATCAATGATCTTGATGC+AGG | 0.493471 | 4.4:+80633956 | MS.gene80740:CDS |
| TGACACCTCAGATGACCAAC+AGG | 0.496044 | 4.4:+80632884 | MS.gene80740:CDS |
| CCGGGAAGTTGAACATTGGT+AGG | 0.497705 | 4.4:-80634061 | None:intergenic |
| TTTGGTTGCTCAAAAGTTGG+AGG | 0.500397 | 4.4:-80634811 | None:intergenic |
| ATTGACAAGCTACTAGAATA+CGG | 0.510760 | 4.4:+80634841 | MS.gene80740:CDS |
| GGCGCCTACTCGTGATGATA+GGG | 0.511511 | 4.4:+80634195 | MS.gene80740:CDS |
| AGCAGACCTCAAAGGACAGA+TGG | 0.514834 | 4.4:+80632847 | MS.gene80740:CDS |
| CGTGTTCCTATCATCGTCAC+TGG | 0.515049 | 4.4:+80634109 | MS.gene80740:CDS |
| TCCTATGATTATATCAGTAC+CGG | 0.515211 | 4.4:+80632987 | MS.gene80740:CDS |
| TCAGCGCAACCTTCTGGGAC+AGG | 0.517907 | 4.4:-80635146 | None:intergenic |
| TATGCTCCTTTAATTCGTGA+TGG | 0.521032 | 4.4:+80634151 | MS.gene80740:CDS |
| TCTTGACAATGTCATCCTTA+GGG | 0.521614 | 4.4:-80634255 | None:intergenic |
| CAGGACAGATGGTGTCCCTA+AGG | 0.522125 | 4.4:+80634240 | MS.gene80740:CDS |
| AGGAATTGGATATCTGGTAT+TGG | 0.523666 | 4.4:+80634745 | MS.gene80740:CDS |
| TTTAATTCGTGATGGACGTA+TGG | 0.525860 | 4.4:+80634159 | MS.gene80740:CDS |
| AATGACGATGCTATCAAGAC+TGG | 0.527194 | 4.4:+80634949 | MS.gene80740:CDS |
| ACAGGATATCACAAGGGGAA+AGG | 0.531778 | 4.4:+80632902 | MS.gene80740:CDS |
| ACCGGTACTGATATAATCAT+AGG | 0.533522 | 4.4:-80632988 | None:intergenic |
| GAATTGGAAAGTGGAAATGC+AGG | 0.534950 | 4.4:+80633857 | MS.gene80740:CDS |
| AAGACTTGTGAATTCAAAAG+AGG | 0.535398 | 4.4:+80634786 | MS.gene80740:CDS |
| TGATAATGTCGGACGCCTCA+CGG | 0.537380 | 4.4:-80633910 | None:intergenic |
| AATGATCTTGATGCAGGAGC+TGG | 0.538362 | 4.4:+80633962 | MS.gene80740:CDS |
| AGCTGACAAATACCTCAGTC+AGG | 0.538759 | 4.4:+80634909 | MS.gene80740:CDS |
| TATCACAAGGGGAAAGGGAA+AGG | 0.540011 | 4.4:+80632908 | MS.gene80740:CDS |
| TGAGCTTGTCTTTGCCAAGA+TGG | 0.545502 | 4.4:+80633655 | MS.gene80740:CDS |
| GATGCAGGAGCTGGTAGAAT+GGG | 0.546512 | 4.4:+80633971 | MS.gene80740:CDS |
| GGTATTGGTGTGGAGAGTAT+TGG | 0.554129 | 4.4:+80634760 | MS.gene80740:CDS |
| GCTTACCAATTGACTGTCCA+GGG | 0.556345 | 4.4:-80634291 | None:intergenic |
| ACCAGACAAACTCTTCTGGC+TGG | 0.558437 | 4.4:-80632784 | None:intergenic |
| CCATCGTCACTTCTGGCTGT+CGG | 0.561082 | 4.4:-80635191 | None:intergenic |
| ATTTGGGGAGGCAAAGGTCA+AGG | 0.561672 | 4.4:+80633617 | MS.gene80740:CDS |
| CAGTGTCTTTCAAGCTCCAA+CGG | 0.565417 | 4.4:+80632935 | MS.gene80740:CDS |
| ATGAACTTACTGGCGAAGAC+CGG | 0.570181 | 4.4:-80633006 | None:intergenic |
| ACAAGCTTGTCCATAAATGC+AGG | 0.573184 | 4.4:-80633533 | None:intergenic |
| TGATGCAGGAGCTGGTAGAA+TGG | 0.573216 | 4.4:+80633970 | MS.gene80740:CDS |
| AAGAACAAGAGAATGTGAAG+AGG | 0.574498 | 4.4:+80634878 | MS.gene80740:CDS |
| TCTTCTTTGTTGTACATACC+GGG | 0.579180 | 4.4:-80634079 | None:intergenic |
| GGTTGTCAGCAATGTTCATG+AGG | 0.579374 | 4.4:-80634039 | None:intergenic |
| GTTCCTTTACCTGTCCCAGA+AGG | 0.583970 | 4.4:+80635137 | MS.gene80740:CDS |
| AGCCCTATAATGATGAGTGC+CGG | 0.586108 | 4.4:+80633833 | MS.gene80740:intron |
| ACTAGAATACGGAAATATGT+TGG | 0.586255 | 4.4:+80634852 | MS.gene80740:CDS |
| CGGGAAGTTGAACATTGGTA+GGG | 0.586332 | 4.4:-80634060 | None:intergenic |
| CCCCAAATGCCCAAAATGAG+AGG | 0.592582 | 4.4:-80633602 | None:intergenic |
| GCAGACCTCAAAGGACAGAT+GGG | 0.592933 | 4.4:+80632848 | MS.gene80740:CDS |
| TTGGATATCTGGTATTGGTG+TGG | 0.595454 | 4.4:+80634750 | MS.gene80740:CDS |
| GAGCTTGTCTTTGCCAAGAT+GGG | 0.595810 | 4.4:+80633656 | MS.gene80740:CDS |
| TGGAGCCATTAACATGGCAC+AGG | 0.599758 | 4.4:+80632049 | MS.gene80740:CDS |
| CACAAGGGGAAAGGGAAAGG+TGG | 0.605010 | 4.4:+80632911 | MS.gene80740:CDS |
| GTTGTCAGCAATGTTCATGA+GGG | 0.605287 | 4.4:-80634038 | None:intergenic |
| AGACTTGTGAATTCAAAAGA+GGG | 0.610232 | 4.4:+80634787 | MS.gene80740:CDS |
| TAGTGAGTTCCAGCATCCGT+TGG | 0.612756 | 4.4:-80632951 | None:intergenic |
| AGAACAAGAGAATGTGAAGA+GGG | 0.613350 | 4.4:+80634879 | MS.gene80740:CDS |
| AATTGTTGGAGCCATTAACA+TGG | 0.617506 | 4.4:+80632043 | MS.gene80740:CDS |
| TGAGGAAAAGCAGACCTCAA+AGG | 0.617972 | 4.4:+80632839 | MS.gene80740:CDS |
| GATATCCTGTTGGTCATCTG+AGG | 0.618471 | 4.4:-80632889 | None:intergenic |
| AAATTGAACGGCTCTAGCAG+TGG | 0.620869 | 4.4:+80632699 | MS.gene80740:CDS |
| AGTGCCGGAGAATTGGAAAG+TGG | 0.623122 | 4.4:+80633848 | MS.gene80740:CDS |
| CTGCAAAGTTGATTAGGCAA+AGG | 0.623429 | 4.4:+80633885 | MS.gene80740:CDS |
| TGTATGCAGTTGAAATTGAA+CGG | 0.623551 | 4.4:+80632687 | MS.gene80740:intron |
| CCTACTCGTGATGATAGGGT+TGG | 0.628308 | 4.4:+80634199 | MS.gene80740:CDS |
| CTCCAAGAGCTGCCTGACTG+AGG | 0.628443 | 4.4:-80634921 | None:intergenic |
| CCGACAGCCAGAAGTGACGA+TGG | 0.630990 | 4.4:+80635191 | MS.gene80740:CDS |
| GACCAACAGGATATCACAAG+GGG | 0.645088 | 4.4:+80632897 | MS.gene80740:CDS |
| CAGTGACGATGATAGGAACA+CGG | 0.649609 | 4.4:-80634108 | None:intergenic |
| CATACCGGGAAGTTGAACAT+TGG | 0.657559 | 4.4:-80634065 | None:intergenic |
| ATACACAGTCAATAACCAGA+TGG | 0.667649 | 4.4:+80634006 | MS.gene80740:CDS |
| AGTGACGATGATAGGAACAC+GGG | 0.670958 | 4.4:-80634107 | None:intergenic |
| ATGACCAACAGGATATCACA+AGG | 0.671981 | 4.4:+80632895 | MS.gene80740:CDS |
| GCAGGAGCTGGTAGAATGGG+TGG | 0.672116 | 4.4:+80633974 | MS.gene80740:CDS |
| CCAACCCTATCATCACGAGT+AGG | 0.676755 | 4.4:-80634199 | None:intergenic |
| GATAGGGTTGGTGTATGTCA+AGG | 0.678055 | 4.4:+80634211 | MS.gene80740:CDS |
| TGACCAACAGGATATCACAA+GGG | 0.701639 | 4.4:+80632896 | MS.gene80740:CDS |
| GATTAGGCAAAGGTACCGTG+AGG | 0.742836 | 4.4:+80633895 | MS.gene80740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTTTGAATTATTTTG+AGG | + | chr4.4:80633331-80633350 | MS.gene80740:intron | 10.0% |
| !! | CATGGTTAATAATAAATATA+AGG | - | chr4.4:80634620-80634639 | None:intergenic | 15.0% |
| !! | TTTCTGTTATTATCTTTAAA+AGG | + | chr4.4:80634998-80635017 | MS.gene80740:intron | 15.0% |
| !! | AAACAATAAGATAACATTCT+TGG | - | chr4.4:80635092-80635111 | None:intergenic | 20.0% |
| !! | AAGAATGTTATCTTATTGTT+TGG | + | chr4.4:80635091-80635110 | MS.gene80740:intron | 20.0% |
| !! | AATCTTTGTTAACTGAAATA+AGG | - | chr4.4:80633036-80633055 | None:intergenic | 20.0% |
| !! | ACAAATAGATACATAATAGA+AGG | - | chr4.4:80632332-80632351 | None:intergenic | 20.0% |
| !! | ATGCTAATTTACTTATTCTT+AGG | + | chr4.4:80633107-80633126 | MS.gene80740:intron | 20.0% |
| !! | GATAATAACAGAAAAATCAA+AGG | - | chr4.4:80634992-80635011 | None:intergenic | 20.0% |
| !! | TACATAAAATGATAACACTT+CGG | - | chr4.4:80633079-80633098 | None:intergenic | 20.0% |
| !! | TAGTAGATATTTGTATCAAT+TGG | - | chr4.4:80633197-80633216 | None:intergenic | 20.0% |
| !! | TGATATTCTAGGTTATAATA+TGG | + | chr4.4:80633362-80633381 | MS.gene80740:intron | 20.0% |
| !!! | ATTTTGAATTATTTTGAGGT+TGG | + | chr4.4:80633335-80633354 | MS.gene80740:intron | 20.0% |
| !!! | CATTTCTTTGTAGATTTTTT+TGG | + | chr4.4:80634688-80634707 | MS.gene80740:intron | 20.0% |
| !!! | TTCCTGTATTATTTGATTTA+TGG | + | chr4.4:80633307-80633326 | MS.gene80740:intron | 20.0% |
| ! | AAAAATGCTGAATTTGTCAT+AGG | - | chr4.4:80632729-80632748 | None:intergenic | 25.0% |
| ! | AAGGTAAAAAGAAATTTGAC+AGG | + | chr4.4:80633682-80633701 | MS.gene80740:intron | 25.0% |
| ! | ACGTATGGAAAAATTCTATT+GGG | + | chr4.4:80634174-80634193 | MS.gene80740:CDS | 25.0% |
| ! | ACTCCAAATTGAATGAAAAT+TGG | - | chr4.4:80632630-80632649 | None:intergenic | 25.0% |
| ! | AGCCATAAATCAAATAATAC+AGG | - | chr4.4:80633312-80633331 | None:intergenic | 25.0% |
| ! | ATGAGAGGAATCTTAATATT+TGG | - | chr4.4:80633590-80633609 | None:intergenic | 25.0% |
| ! | CTATTTGTATGAGTGTTAAT+AGG | + | chr4.4:80632344-80632363 | MS.gene80740:intron | 25.0% |
| ! | TATCAGTATCTTACGATATA+TGG | + | chr4.4:80633138-80633157 | MS.gene80740:intron | 25.0% |
| !! | ATGACAAATTCAGCATTTTT+CGG | + | chr4.4:80632729-80632748 | MS.gene80740:CDS | 25.0% |
| !! | ATGCTTTTCTTAACAAACTT+TGG | + | chr4.4:80632076-80632095 | MS.gene80740:intron | 25.0% |
| !! | ATTAAGATTCCTCTCATTTT+GGG | + | chr4.4:80633593-80633612 | MS.gene80740:CDS | 25.0% |
| !! | GTGTTATCATTTTATGTACT+TGG | + | chr4.4:80633081-80633100 | MS.gene80740:intron | 25.0% |
| !! | GTTCCAATTTTCATTCAATT+TGG | + | chr4.4:80632624-80632643 | MS.gene80740:intron | 25.0% |
| !! | TATTAAGATTCCTCTCATTT+TGG | + | chr4.4:80633592-80633611 | MS.gene80740:CDS | 25.0% |
| !! | TTCATTCAATTTGGAGTTTA+TGG | + | chr4.4:80632633-80632652 | MS.gene80740:intron | 25.0% |
| !!! | AGTCAAAATTTCTAGTTACT+AGG | + | chr4.4:80634335-80634354 | MS.gene80740:intron | 25.0% |
| !!! | GTCAAAATTTCTAGTTACTA+GGG | + | chr4.4:80634336-80634355 | MS.gene80740:intron | 25.0% |
| AAGACTTGTGAATTCAAAAG+AGG | + | chr4.4:80634786-80634805 | MS.gene80740:CDS | 30.0% | |
| AATATGGACAACACAATAGA+TGG | + | chr4.4:80633497-80633516 | MS.gene80740:CDS | 30.0% | |
| AATCTGGATTTGATATGTTC+AGG | + | chr4.4:80633471-80633490 | MS.gene80740:intron | 30.0% | |
| AATGAAAATTGGAACAGACT+CGG | - | chr4.4:80632619-80632638 | None:intergenic | 30.0% | |
| AATGATCTGAAAACAGCTTA+CGG | - | chr4.4:80634434-80634453 | None:intergenic | 30.0% | |
| ACTAGAATACGGAAATATGT+TGG | + | chr4.4:80634852-80634871 | MS.gene80740:CDS | 30.0% | |
| AGACTTGTGAATTCAAAAGA+GGG | + | chr4.4:80634787-80634806 | MS.gene80740:CDS | 30.0% | |
| AGGTGCATCATGTATATTAA+CGG | - | chr4.4:80632312-80632331 | None:intergenic | 30.0% | |
| AGTCATGGTTTCAAAAGAAA+AGG | - | chr4.4:80632548-80632567 | None:intergenic | 30.0% | |
| ATAAGGTGAAATGAACTTAC+TGG | - | chr4.4:80633019-80633038 | None:intergenic | 30.0% | |
| ATTATAGGGCTAAATTTCCA+AGG | - | chr4.4:80633824-80633843 | None:intergenic | 30.0% | |
| ATTGACAAGCTACTAGAATA+CGG | + | chr4.4:80634841-80634860 | MS.gene80740:CDS | 30.0% | |
| GACGTATGGAAAAATTCTAT+TGG | + | chr4.4:80634173-80634192 | MS.gene80740:CDS | 30.0% | |
| GGCAAAAATTGACTATAATG+AGG | + | chr4.4:80632821-80632840 | MS.gene80740:CDS | 30.0% | |
| GGTTAATTGAGGACTAATAA+CGG | + | chr4.4:80632654-80632673 | MS.gene80740:intron | 30.0% | |
| TCCTATGATTATATCAGTAC+CGG | + | chr4.4:80632987-80633006 | MS.gene80740:CDS | 30.0% | |
| TGATATGTTCAGGTACAATA+TGG | + | chr4.4:80633481-80633500 | MS.gene80740:intron | 30.0% | |
| TGTATGCAGTTGAAATTGAA+CGG | + | chr4.4:80632687-80632706 | MS.gene80740:intron | 30.0% | |
| TTATCTTATTGTTTGGATGC+AGG | + | chr4.4:80635098-80635117 | MS.gene80740:intron | 30.0% | |
| TTGAAACTTAGATTGAGCTA+TGG | - | chr4.4:80634316-80634335 | None:intergenic | 30.0% | |
| TTGGAGTTTATGGTTAATTG+AGG | + | chr4.4:80632643-80632662 | MS.gene80740:intron | 30.0% | |
| TTTACTTATTCTTAGGCACA+TGG | + | chr4.4:80633114-80633133 | MS.gene80740:intron | 30.0% | |
| TTTGATTCACGATTTGAATC+TGG | + | chr4.4:80633455-80633474 | MS.gene80740:intron | 30.0% | |
| ! | AACTCTTTTATCTACTTCCT+TGG | + | chr4.4:80633804-80633823 | MS.gene80740:intron | 30.0% |
| ! | ATTCCAATCTTTTGATATCG+TGG | + | chr4.4:80632420-80632439 | MS.gene80740:intron | 30.0% |
| ! | TTTTTACCTTATTCCCATCT+TGG | - | chr4.4:80633672-80633691 | None:intergenic | 30.0% |
| !! | CTTTCCTTTTCTGATAATGT+CGG | - | chr4.4:80633924-80633943 | None:intergenic | 30.0% |
| !! | TCTAATTGATAGTGTGTCTT+AGG | + | chr4.4:80633419-80633438 | MS.gene80740:intron | 30.0% |
| !! | TGACATTTTTAAGCAAGAAC+AGG | - | chr4.4:80633396-80633415 | None:intergenic | 30.0% |
| !! | TTCGTCTAAAGCAAACTTTT+AGG | - | chr4.4:80635029-80635048 | None:intergenic | 30.0% |
| !!! | AGATTTTTTTGGTGCATTGA+GGG | + | chr4.4:80634699-80634718 | MS.gene80740:intron | 30.0% |
| !!! | TAGATTTTTTTGGTGCATTG+AGG | + | chr4.4:80634698-80634717 | MS.gene80740:intron | 30.0% |
| AACACGCTAACTATGATACT+TGG | + | chr4.4:80633737-80633756 | MS.gene80740:intron | 35.0% | |
| AAGAACAAGAGAATGTGAAG+AGG | + | chr4.4:80634878-80634897 | MS.gene80740:CDS | 35.0% | |
| AATTGTTGGAGCCATTAACA+TGG | + | chr4.4:80632043-80632062 | MS.gene80740:CDS | 35.0% | |
| AGAACAAGAGAATGTGAAGA+GGG | + | chr4.4:80634879-80634898 | MS.gene80740:CDS | 35.0% | |
| AGCTTGTCAATAGTCATCTT+TGG | - | chr4.4:80634832-80634851 | None:intergenic | 35.0% | |
| AGGAATTGGATATCTGGTAT+TGG | + | chr4.4:80634745-80634764 | MS.gene80740:CDS | 35.0% | |
| ATACACAGTCAATAACCAGA+TGG | + | chr4.4:80634006-80634025 | MS.gene80740:CDS | 35.0% | |
| ATACGTCCATCACGAATTAA+AGG | - | chr4.4:80634160-80634179 | None:intergenic | 35.0% | |
| ATCAAGACTGGAAACTTCTA+TGG | + | chr4.4:80634961-80634980 | MS.gene80740:CDS | 35.0% | |
| ATCTTGACAATGTCATCCTT+AGG | - | chr4.4:80634259-80634278 | None:intergenic | 35.0% | |
| ATCTTTGGTTGCTCAAAAGT+TGG | - | chr4.4:80634817-80634836 | None:intergenic | 35.0% | |
| ATTTCCACTTTCCAATTCTC+CGG | - | chr4.4:80633855-80633874 | None:intergenic | 35.0% | |
| CTAACTATGATACTTGGCTT+AGG | + | chr4.4:80633743-80633762 | MS.gene80740:intron | 35.0% | |
| CTAGATTAGCAGAAAGAGTT+TGG | + | chr4.4:80632230-80632249 | MS.gene80740:intron | 35.0% | |
| GAGTTTGTCTGGTAACTTTA+AGG | + | chr4.4:80632794-80632813 | MS.gene80740:CDS | 35.0% | |
| GTAACTTCTGTGACAATTGT+TGG | + | chr4.4:80632029-80632048 | MS.gene80740:CDS | 35.0% | |
| GTATATTGCACCTGCATTTA+TGG | + | chr4.4:80633523-80633542 | MS.gene80740:CDS | 35.0% | |
| TATGCTCCTTTAATTCGTGA+TGG | + | chr4.4:80634151-80634170 | MS.gene80740:CDS | 35.0% | |
| TCTCCACGATATCAAAAGAT+TGG | - | chr4.4:80632426-80632445 | None:intergenic | 35.0% | |
| TCTTCACATTCTCTTGTTCT+TGG | - | chr4.4:80634879-80634898 | None:intergenic | 35.0% | |
| TCTTGACAATGTCATCCTTA+GGG | - | chr4.4:80634258-80634277 | None:intergenic | 35.0% | |
| TTCATCAATGATCTTGATGC+AGG | + | chr4.4:80633956-80633975 | MS.gene80740:CDS | 35.0% | |
| ! | CTCTTCTTTGTTGTACATAC+CGG | - | chr4.4:80634083-80634102 | None:intergenic | 35.0% |
| ! | GATCATAGTTTTCTGCAGAA+GGG | - | chr4.4:80635172-80635191 | None:intergenic | 35.0% |
| ! | TACTAACAAAAGCACATCTG+AGG | + | chr4.4:80634370-80634389 | MS.gene80740:intron | 35.0% |
| ! | TCTTCTTTGTTGTACATACC+GGG | - | chr4.4:80634082-80634101 | None:intergenic | 35.0% |
| !! | ACCGGTACTGATATAATCAT+AGG | - | chr4.4:80632991-80633010 | None:intergenic | 35.0% |
| !! | AGGTTGGTAGATGATATTCT+AGG | + | chr4.4:80633351-80633370 | MS.gene80740:intron | 35.0% |
| !! | GTCTGGTAACTTTAAGGTTT+CGG | + | chr4.4:80632800-80632819 | MS.gene80740:CDS | 35.0% |
| !! | GTGTATGTCAAGGTATTTTC+AGG | + | chr4.4:80634221-80634240 | MS.gene80740:CDS | 35.0% |
| !! | TCAATGTTTTTATGTCTCCG+CGG | - | chr4.4:80632498-80632517 | None:intergenic | 35.0% |
| !! | TTTAATTCGTGATGGACGTA+TGG | + | chr4.4:80634159-80634178 | MS.gene80740:CDS | 35.0% |
| AAAGGTTTGCAGCTGCAATT+TGG | - | chr4.4:80632530-80632549 | None:intergenic | 40.0% | |
| AATGACGATGCTATCAAGAC+TGG | + | chr4.4:80634949-80634968 | MS.gene80740:CDS | 40.0% | |
| ACAAGCTTGTCCATAAATGC+AGG | - | chr4.4:80633536-80633555 | None:intergenic | 40.0% | |
| AGAATCATCACTGTGAATCG+TGG | - | chr4.4:80633262-80633281 | None:intergenic | 40.0% | |
| AGACTACAGACTTAGAGTCA+TGG | - | chr4.4:80632563-80632582 | None:intergenic | 40.0% | |
| AGTTACCAGACAAACTCTTC+TGG | - | chr4.4:80632791-80632810 | None:intergenic | 40.0% | |
| ATAGAGTTCAAATCCCCTCA+GGG | + | chr4.4:80632270-80632289 | MS.gene80740:intron | 40.0% | |
| ATGACCAACAGGATATCACA+AGG | + | chr4.4:80632895-80632914 | MS.gene80740:CDS | 40.0% | |
| ATGACGATGAAGTCAGGAAT+TGG | + | chr4.4:80634731-80634750 | MS.gene80740:CDS | 40.0% | |
| ATGATACTTGGCTTAGGAGT+AGG | + | chr4.4:80633749-80633768 | MS.gene80740:intron | 40.0% | |
| CAAGTCTCGAACTCATATCA+TGG | - | chr4.4:80634638-80634657 | None:intergenic | 40.0% | |
| CATGATATGAGTTCGAGACT+TGG | + | chr4.4:80634636-80634655 | MS.gene80740:intron | 40.0% | |
| CTTTGCCTAATCAACTTTGC+AGG | - | chr4.4:80633887-80633906 | None:intergenic | 40.0% | |
| GAAGTCAGGAATTGGATATC+TGG | + | chr4.4:80634739-80634758 | MS.gene80740:CDS | 40.0% | |
| GAATTGGAAAGTGGAAATGC+AGG | + | chr4.4:80633857-80633876 | MS.gene80740:CDS | 40.0% | |
| GATTTGAACTCTATCCCTTG+AGG | - | chr4.4:80632264-80632283 | None:intergenic | 40.0% | |
| GCACATCTTGGACATAAGAA+TGG | - | chr4.4:80632211-80632230 | None:intergenic | 40.0% | |
| GCTGTTTGCATAAGCTATCA+TGG | - | chr4.4:80634468-80634487 | None:intergenic | 40.0% | |
| GTTGTCAGCAATGTTCATGA+GGG | - | chr4.4:80634041-80634060 | None:intergenic | 40.0% | |
| TATTGTTTGGATGCAGGACA+AGG | + | chr4.4:80635104-80635123 | MS.gene80740:intron | 40.0% | |
| TCATTTCCAGTGACGATGAT+AGG | - | chr4.4:80634118-80634137 | None:intergenic | 40.0% | |
| TCTGCTAATCTAGCACATCT+TGG | - | chr4.4:80632223-80632242 | None:intergenic | 40.0% | |
| TCTTTGCCAAGATGGGAATA+AGG | + | chr4.4:80633663-80633682 | MS.gene80740:CDS | 40.0% | |
| TGACCAACAGGATATCACAA+GGG | + | chr4.4:80632896-80632915 | MS.gene80740:CDS | 40.0% | |
| TTGTACCTGTGCCATGTTAA+TGG | - | chr4.4:80632057-80632076 | None:intergenic | 40.0% | |
| TTTGGTTGCTCAAAAGTTGG+AGG | - | chr4.4:80634814-80634833 | None:intergenic | 40.0% | |
| ! | CTGCAAAGTTGATTAGGCAA+AGG | + | chr4.4:80633885-80633904 | MS.gene80740:CDS | 40.0% |
| ! | GGATCATAGTTTTCTGCAGA+AGG | - | chr4.4:80635173-80635192 | None:intergenic | 40.0% |
| ! | TCCTCTCATTTTGGGCATTT+GGG | + | chr4.4:80633601-80633620 | MS.gene80740:CDS | 40.0% |
| ! | TTCCTCTCATTTTGGGCATT+TGG | + | chr4.4:80633600-80633619 | MS.gene80740:CDS | 40.0% |
| !! | CAAGGTATTTTCAGGACAGA+TGG | + | chr4.4:80634229-80634248 | MS.gene80740:CDS | 40.0% |
| !! | TCGCAGAACTAGCTTTCTTA+AGG | - | chr4.4:80632761-80632780 | None:intergenic | 40.0% |
| !! | TTGGATATCTGGTATTGGTG+TGG | + | chr4.4:80634750-80634769 | MS.gene80740:CDS | 40.0% |
| AAGATTGTCGACACATTCCC+TGG | + | chr4.4:80634274-80634293 | MS.gene80740:CDS | 45.0% | |
| AATGATCTTGATGCAGGAGC+TGG | + | chr4.4:80633962-80633981 | MS.gene80740:CDS | 45.0% | |
| ACAGGATATCACAAGGGGAA+AGG | + | chr4.4:80632902-80632921 | MS.gene80740:CDS | 45.0% | |
| ACATTCCCTGGACAGTCAAT+TGG | + | chr4.4:80634286-80634305 | MS.gene80740:CDS | 45.0% | |
| AGCCCTATAATGATGAGTGC+CGG | + | chr4.4:80633833-80633852 | MS.gene80740:intron | 45.0% | |
| AGCTGACAAATACCTCAGTC+AGG | + | chr4.4:80634909-80634928 | MS.gene80740:CDS | 45.0% | |
| AGTGACGATGATAGGAACAC+GGG | - | chr4.4:80634110-80634129 | None:intergenic | 45.0% | |
| AGTTATTGTCAAGACCGACG+CGG | - | chr4.4:80635060-80635079 | None:intergenic | 45.0% | |
| ATGAACTTACTGGCGAAGAC+CGG | - | chr4.4:80633009-80633028 | None:intergenic | 45.0% | |
| CAGGATATCACAAGGGGAAA+GGG | + | chr4.4:80632903-80632922 | MS.gene80740:CDS | 45.0% | |
| CAGTGACGATGATAGGAACA+CGG | - | chr4.4:80634111-80634130 | None:intergenic | 45.0% | |
| CAGTGTCTTTCAAGCTCCAA+CGG | + | chr4.4:80632935-80632954 | MS.gene80740:CDS | 45.0% | |
| CATACCGGGAAGTTGAACAT+TGG | - | chr4.4:80634068-80634087 | None:intergenic | 45.0% | |
| CCTACCAATGTTCAACTTCC+CGG | + | chr4.4:80634061-80634080 | MS.gene80740:CDS | 45.0% | |
| CGGGAAGTTGAACATTGGTA+GGG | - | chr4.4:80634063-80634082 | None:intergenic | 45.0% | |
| CGTCGGTCTTGACAATAACT+TGG | + | chr4.4:80635060-80635079 | MS.gene80740:intron | 45.0% | |
| CTCCGGCACTCATCATTATA+GGG | - | chr4.4:80633838-80633857 | None:intergenic | 45.0% | |
| GACCAACAGGATATCACAAG+GGG | + | chr4.4:80632897-80632916 | MS.gene80740:CDS | 45.0% | |
| GAGCTTGTCTTTGCCAAGAT+GGG | + | chr4.4:80633656-80633675 | MS.gene80740:CDS | 45.0% | |
| GAGTGTATGACGATGAAGTC+AGG | + | chr4.4:80634725-80634744 | MS.gene80740:CDS | 45.0% | |
| GATAGAGTTCAAATCCCCTC+AGG | + | chr4.4:80632269-80632288 | MS.gene80740:intron | 45.0% | |
| GATATCCTGTTGGTCATCTG+AGG | - | chr4.4:80632892-80632911 | None:intergenic | 45.0% | |
| GCGTCCGACATTATCAGAAA+AGG | + | chr4.4:80633917-80633936 | MS.gene80740:CDS | 45.0% | |
| GCTTACCAATTGACTGTCCA+GGG | - | chr4.4:80634294-80634313 | None:intergenic | 45.0% | |
| GGTTGTCAGCAATGTTCATG+AGG | - | chr4.4:80634042-80634061 | None:intergenic | 45.0% | |
| TATCACAAGGGGAAAGGGAA+AGG | + | chr4.4:80632908-80632927 | MS.gene80740:CDS | 45.0% | |
| TCTCCGGCACTCATCATTAT+AGG | - | chr4.4:80633839-80633858 | None:intergenic | 45.0% | |
| TGAGCTTGTCTTTGCCAAGA+TGG | + | chr4.4:80633655-80633674 | MS.gene80740:CDS | 45.0% | |
| TGAGGAAAAGCAGACCTCAA+AGG | + | chr4.4:80632839-80632858 | MS.gene80740:CDS | 45.0% | |
| TGAGGGTTGCATTTACCATC+TGG | - | chr4.4:80634024-80634043 | None:intergenic | 45.0% | |
| TTCCCCTTGTGATATCCTGT+TGG | - | chr4.4:80632902-80632921 | None:intergenic | 45.0% | |
| ! | AAATTGAACGGCTCTAGCAG+TGG | + | chr4.4:80632699-80632718 | MS.gene80740:CDS | 45.0% |
| ! | ATTTTACTACCGTGCCCTGA+GGG | - | chr4.4:80632287-80632306 | None:intergenic | 45.0% |
| ! | CCTCTCATTTTGGGCATTTG+GGG | + | chr4.4:80633602-80633621 | MS.gene80740:CDS | 45.0% |
| ! | GAGAGCCTGCAAAGTTGATT+AGG | + | chr4.4:80633879-80633898 | MS.gene80740:CDS | 45.0% |
| ! | TATTTTACTACCGTGCCCTG+AGG | - | chr4.4:80632288-80632307 | None:intergenic | 45.0% |
| !! | AATGATGAGTGCCGGAGAAT+TGG | + | chr4.4:80633841-80633860 | MS.gene80740:CDS | 45.0% |
| !! | GATAGGGTTGGTGTATGTCA+AGG | + | chr4.4:80634211-80634230 | MS.gene80740:CDS | 45.0% |
| !! | GGTATTGGTGTGGAGAGTAT+TGG | + | chr4.4:80634760-80634779 | MS.gene80740:CDS | 45.0% |
| !! | AATATATACATAAAAAAAAT+TGG | + | chr4.4:80632185-80632204 | MS.gene80740:intron | 5.0% |
| ACCAGACAAACTCTTCTGGC+TGG | - | chr4.4:80632787-80632806 | None:intergenic | 50.0% | |
| AGCAGACCTCAAAGGACAGA+TGG | + | chr4.4:80632847-80632866 | MS.gene80740:CDS | 50.0% | |
| AGTTTGGTCATGCAGCCTCA+AGG | + | chr4.4:80632246-80632265 | MS.gene80740:intron | 50.0% | |
| ATTTGGGGAGGCAAAGGTCA+AGG | + | chr4.4:80633617-80633636 | MS.gene80740:CDS | 50.0% | |
| CCAACCCTATCATCACGAGT+AGG | - | chr4.4:80634202-80634221 | None:intergenic | 50.0% | |
| CCCCAAATGCCCAAAATGAG+AGG | - | chr4.4:80633605-80633624 | None:intergenic | 50.0% | |
| CCGGGAAGTTGAACATTGGT+AGG | - | chr4.4:80634064-80634083 | None:intergenic | 50.0% | |
| CCTACTCGTGATGATAGGGT+TGG | + | chr4.4:80634199-80634218 | MS.gene80740:CDS | 50.0% | |
| CGTGTTCCTATCATCGTCAC+TGG | + | chr4.4:80634109-80634128 | MS.gene80740:CDS | 50.0% | |
| GACGAACAAATATGCCGCGT+CGG | + | chr4.4:80635043-80635062 | MS.gene80740:intron | 50.0% | |
| GATGCAGGAGCTGGTAGAAT+GGG | + | chr4.4:80633971-80633990 | MS.gene80740:CDS | 50.0% | |
| GCAACTTCCATCGTCACTTC+TGG | - | chr4.4:80635201-80635220 | None:intergenic | 50.0% | |
| GCAGACCTCAAAGGACAGAT+GGG | + | chr4.4:80632848-80632867 | MS.gene80740:CDS | 50.0% | |
| GGCTTACCAATTGACTGTCC+AGG | - | chr4.4:80634295-80634314 | None:intergenic | 50.0% | |
| GTTCCTTTACCTGTCCCAGA+AGG | + | chr4.4:80635137-80635156 | MS.gene80740:CDS | 50.0% | |
| GTTTGGTCATGCAGCCTCAA+GGG | + | chr4.4:80632247-80632266 | MS.gene80740:intron | 50.0% | |
| TAGTGAGTTCCAGCATCCGT+TGG | - | chr4.4:80632954-80632973 | None:intergenic | 50.0% | |
| TCCAGCCAGAAGAGTTTGTC+TGG | + | chr4.4:80632783-80632802 | MS.gene80740:CDS | 50.0% | |
| TGACACCTCAGATGACCAAC+AGG | + | chr4.4:80632884-80632903 | MS.gene80740:CDS | 50.0% | |
| TGATGCAGGAGCTGGTAGAA+TGG | + | chr4.4:80633970-80633989 | MS.gene80740:CDS | 50.0% | |
| TGGAGCCATTAACATGGCAC+AGG | + | chr4.4:80632049-80632068 | MS.gene80740:CDS | 50.0% | |
| TTTCAAGCTCCAACGGATGC+TGG | + | chr4.4:80632942-80632961 | MS.gene80740:CDS | 50.0% | |
| ! | AGTGCCGGAGAATTGGAAAG+TGG | + | chr4.4:80633848-80633867 | MS.gene80740:CDS | 50.0% |
| ! | CTCATTTTGGGCATTTGGGG+AGG | + | chr4.4:80633605-80633624 | MS.gene80740:CDS | 50.0% |
| ! | TGATAATGTCGGACGCCTCA+CGG | - | chr4.4:80633913-80633932 | None:intergenic | 50.0% |
| ! | TTTTACTACCGTGCCCTGAG+GGG | - | chr4.4:80632286-80632305 | None:intergenic | 50.0% |
| !! | CAACCTTCTGGGACAGGTAA+AGG | - | chr4.4:80635143-80635162 | None:intergenic | 50.0% |
| !! | GATTAGGCAAAGGTACCGTG+AGG | + | chr4.4:80633895-80633914 | MS.gene80740:CDS | 50.0% |
| AAGGGTCAGCGCAACCTTCT+GGG | - | chr4.4:80635154-80635173 | None:intergenic | 55.0% | |
| ACCTCAAAGGACAGATGGGC+TGG | + | chr4.4:80632852-80632871 | MS.gene80740:CDS | 55.0% | |
| ATGTCTCCGCGGTCACAACT+TGG | - | chr4.4:80632487-80632506 | None:intergenic | 55.0% | |
| CACAAGGGGAAAGGGAAAGG+TGG | + | chr4.4:80632911-80632930 | MS.gene80740:CDS | 55.0% | |
| CAGGACAGATGGTGTCCCTA+AGG | + | chr4.4:80634240-80634259 | MS.gene80740:CDS | 55.0% | |
| GGCGCCTACTCGTGATGATA+GGG | + | chr4.4:80634195-80634214 | MS.gene80740:CDS | 55.0% | |
| GTTCAAATCCCCTCAGGGCA+CGG | + | chr4.4:80632275-80632294 | MS.gene80740:intron | 55.0% | |
| TACCTCAGTCAGGCAGCTCT+TGG | + | chr4.4:80634919-80634938 | MS.gene80740:CDS | 55.0% | |
| TCACAACTTGGACGCGGTTG+AGG | - | chr4.4:80632475-80632494 | None:intergenic | 55.0% | |
| TCCAGCCCATCTGTCCTTTG+AGG | - | chr4.4:80632856-80632875 | None:intergenic | 55.0% | |
| TTGGGCATTTGGGGAGGCAA+AGG | + | chr4.4:80633611-80633630 | MS.gene80740:CDS | 55.0% | |
| ! | CCATCGTCACTTCTGGCTGT+CGG | - | chr4.4:80635194-80635213 | None:intergenic | 55.0% |
| CCGACAGCCAGAAGTGACGA+TGG | + | chr4.4:80635191-80635210 | MS.gene80740:CDS | 60.0% | |
| CTCCAAGAGCTGCCTGACTG+AGG | - | chr4.4:80634924-80634943 | None:intergenic | 60.0% | |
| GAAGGGTCAGCGCAACCTTC+TGG | - | chr4.4:80635155-80635174 | None:intergenic | 60.0% | |
| GCAGGAGCTGGTAGAATGGG+TGG | + | chr4.4:80633974-80633993 | MS.gene80740:CDS | 60.0% | |
| GGGCGCCTACTCGTGATGAT+AGG | + | chr4.4:80634194-80634213 | MS.gene80740:CDS | 60.0% | |
| !! | TCAGCGCAACCTTCTGGGAC+AGG | - | chr4.4:80635149-80635168 | None:intergenic | 60.0% |
| CCGCGGTCACAACTTGGACG+CGG | - | chr4.4:80632481-80632500 | None:intergenic | 65.0% | |
| CCGCGTCCAAGTTGTGACCG+CGG | + | chr4.4:80632478-80632497 | MS.gene80740:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 80632026 | 80635235 | 80632026 | ID=MS.gene80740 |
| chr4.4 | mRNA | 80632026 | 80635235 | 80632026 | ID=MS.gene80740.t1;Parent=MS.gene80740 |
| chr4.4 | exon | 80632026 | 80632070 | 80632026 | ID=MS.gene80740.t1.exon1;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80632026 | 80632070 | 80632026 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| chr4.4 | exon | 80632696 | 80633018 | 80632696 | ID=MS.gene80740.t1.exon2;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80632696 | 80633018 | 80632696 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| chr4.4 | exon | 80633493 | 80633684 | 80633493 | ID=MS.gene80740.t1.exon3;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80633493 | 80633684 | 80633493 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| chr4.4 | exon | 80633835 | 80634307 | 80633835 | ID=MS.gene80740.t1.exon4;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80633835 | 80634307 | 80633835 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| chr4.4 | exon | 80634701 | 80634982 | 80634701 | ID=MS.gene80740.t1.exon5;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80634701 | 80634982 | 80634701 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| chr4.4 | exon | 80635120 | 80635235 | 80635120 | ID=MS.gene80740.t1.exon6;Parent=MS.gene80740.t1 |
| chr4.4 | CDS | 80635120 | 80635235 | 80635120 | ID=cds.MS.gene80740.t1;Parent=MS.gene80740.t1 |
| Gene Sequence |
| Protein sequence |
