AlfalfaGEDB | MS.gene80913

M. sativa cultivar XinJiangDaYe / MS.gene80913

KEGG: K03294
GO: GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0022857 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00324.24 PF13520.9 PF13906.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80913.t1	XP_024626367.1	87.9	613	26	2	1	613	1	565	3.90E-285	990.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80913.t1	Q9C5D6	61.1	592	174	6	24	609	23	564	3.8e-188	659.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80913.t1	A0A072U6U4	88.6	590	20	1	24	613	25	567	1.9e-281	977.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene58674	MS.gene80913	PPI
MS.gene80913	MS.gene00402	PPI
MS.gene041367	MS.gene80913	PPI
MS.gene80913	MS.gene073450	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80913.t1	MTR_7g007850	88.762	614	21	2	1	613	1	567	0.0	1064
MS.gene80913.t1	MTR_7g007850	84.627	644	21	3	1	613	1	597	0.0	1049
MS.gene80913.t1	MTR_7g007850	87.337	537	20	2	1	536	1	490	0.0	899
MS.gene80913.t1	MTR_7g007850	87.313	536	20	2	1	535	1	489	0.0	898
MS.gene80913.t1	MTR_6g027660	31.834	578	321	10	84	594	33	604	1.08e-84	277
MS.gene80913.t1	MTR_6g027680	33.090	547	290	11	84	564	35	571	2.45e-84	275
MS.gene80913.t1	MTR_7g086610	31.842	581	316	11	85	594	22	593	5.76e-80	265
MS.gene80913.t1	MTR_6g027630	35.680	412	253	4	84	488	32	438	1.61e-79	263
MS.gene80913.t1	MTR_6g027630	35.680	412	253	4	84	488	32	438	7.81e-79	262
MS.gene80913.t1	MTR_7g086510	38.191	398	234	4	95	485	38	430	8.85e-79	262
MS.gene80913.t1	MTR_6g027650	35.904	415	251	5	84	488	22	431	2.70e-78	260
MS.gene80913.t1	MTR_1g030660	31.238	541	339	9	88	610	60	585	2.00e-72	244
MS.gene80913.t1	MTR_2g035430	30.561	517	345	8	88	600	65	571	5.82e-72	243
MS.gene80913.t1	MTR_8g089320	31.361	507	328	11	79	579	58	550	2.65e-69	236
MS.gene80913.t1	MTR_1g111740	31.608	541	314	10	88	599	43	556	4.39e-69	234
MS.gene80913.t1	MTR_8g089360	31.629	528	340	10	84	605	68	580	5.74e-69	235
MS.gene80913.t1	MTR_8g089360	31.895	533	340	12	84	609	51	567	6.92e-69	234
MS.gene80913.t1	MTR_8g461380	31.538	520	321	10	91	593	75	576	4.63e-64	221
MS.gene80913.t1	MTR_6g027630	34.270	356	223	3	139	488	3	353	1.44e-62	216
MS.gene80913.t1	MTR_4g099270	32.955	528	323	14	88	600	15	526	1.72e-56	200
MS.gene80913.t1	MTR_4g099270	38.136	354	206	8	88	435	36	382	2.52e-51	182
MS.gene80913.t1	MTR_8g089340	27.778	450	297	8	174	610	3	437	4.70e-41	155
MS.gene80913.t1	MTR_4g099270	31.002	429	267	12	186	600	1	414	7.77e-38	146
MS.gene80913.t1	MTR_4g099270	39.130	276	155	8	88	357	36	304	9.53e-36	137
MS.gene80913.t1	MTR_6g027670	28.956	297	157	4	322	564	6	302	1.16e-32	128
MS.gene80913.t1	MTR_7g007840	91.667	60	5	0	24	83	23	82	1.57e-26	103
MS.gene80913.t1	MTR_7g007840	85.106	47	7	0	84	130	36	82	4.76e-18	79.7
MS.gene80913.t1	MTR_6g034535	28.700	223	154	4	389	610	89	307	4.03e-14	74.3
MS.gene80913.t1	MTR_8g089342	43.056	72	40	1	88	158	66	137	6.99e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene80913.t1	AT1G05940	70.810	531	147	4	84	609	37	564	0.0	735
MS.gene80913.t1	AT1G05940	71.545	492	135	3	84	570	37	528	0.0	682
MS.gene80913.t1	AT1G05940	71.991	457	124	2	84	536	37	493	0.0	636
MS.gene80913.t1	AT1G05940	69.933	449	127	4	166	609	1	446	0.0	609
MS.gene80913.t1	AT3G03720	32.394	568	317	10	88	594	17	578	1.21e-93	300
MS.gene80913.t1	AT5G36940	32.186	581	310	12	85	595	19	585	6.37e-82	270
MS.gene80913.t1	AT4G21120	30.639	532	357	6	84	613	61	582	8.77e-78	258
MS.gene80913.t1	AT1G58030	36.181	398	232	7	89	474	34	421	4.90e-77	257
MS.gene80913.t1	AT5G04770	32.717	541	333	12	76	599	38	564	2.96e-73	246
MS.gene80913.t1	AT2G34960	31.489	524	337	7	88	603	57	566	3.45e-73	245
MS.gene80913.t1	AT1G17120	31.081	518	334	8	87	593	73	578	3.61e-67	230
MS.gene80913.t1	AT3G10600	31.512	549	321	11	88	606	49	572	3.75e-66	227
MS.gene80913.t1	AT5G04770	35.753	372	218	8	76	434	38	401	8.68e-61	208
MS.gene80913.t1	AT4G21120	28.539	438	305	3	177	613	2	432	3.91e-56	196
MS.gene80913.t1	AT3G10600	30.046	436	280	8	186	606	1	426	2.87e-50	180
MS.gene80913.t1	AT5G04770	31.163	430	267	10	186	599	1	417	2.12e-48	175

Find 165 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTCATTGCTGTTGCTGTTTC+TGG	-0.028109	7.3:-89768037	MS.gene80913:CDS
CATCTTGTTGGTCTCATTTC+TGG	0.009516	7.3:-89775143	MS.gene80913:CDS
TTCTTTAACATGTTCTTATT+TGG	0.134061	7.3:-89767165	MS.gene80913:CDS
CCCCTCTTCATTCTCAGATT+TGG	0.162253	7.3:-89769070	MS.gene80913:CDS
CCCTCTTCATTCTCAGATTT+GGG	0.191090	7.3:-89769069	MS.gene80913:CDS
GTCTTTGACCTTATACTTCT+TGG	0.209325	7.3:-89771843	MS.gene80913:CDS
AGACCATGTCCAATCCATTT+TGG	0.221103	7.3:+89770243	None:intergenic
TGAAGAGGGGTGTGGCGTTT+GGG	0.255331	7.3:+89769083	None:intergenic
GATTTGCCAATAGGCATAAT+TGG	0.263921	7.3:-89769459	MS.gene80913:CDS
TGTGATTCTAAGCATTCTTA+TGG	0.276279	7.3:-89767015	MS.gene80913:CDS
AAGACAGCTCGCGATAATTC+TGG	0.280455	7.3:-89771891	MS.gene80913:CDS
TAATGCTTGACTATCATATT+GGG	0.287047	7.3:-89770344	MS.gene80913:CDS
GTTATTGTTGTCATCTTTGC+TGG	0.287928	7.3:-89769985	MS.gene80913:CDS
TTAATGCTTGACTATCATAT+TGG	0.288983	7.3:-89770345	MS.gene80913:CDS
ATGAAGAGGGGTGTGGCGTT+TGG	0.293761	7.3:+89769082	None:intergenic
ATTAGCATTGGTGCTATTGC+TGG	0.302863	7.3:-89769297	MS.gene80913:CDS
CTTAGATTCTTCAGCAGAAT+TGG	0.303211	7.3:+89769849	None:intergenic
GGAATGTTATCTTTGAAAAC+AGG	0.303937	7.3:+89770264	None:intergenic
CCATTTGACCTTATCCTTCT+CGG	0.306438	7.3:-89775030	MS.gene80913:CDS
GGAGTATGCTTGGTGATTAC+TGG	0.320177	7.3:-89769405	MS.gene80913:CDS
GGTATAAGACCCGTCTTTAC+AGG	0.324045	7.3:-89769916	MS.gene80913:CDS
GTCGGAGTTTACGCGATATA+TGG	0.324340	7.3:-89766993	MS.gene80913:CDS
CATCTTCATCATCATCTTGT+TGG	0.324866	7.3:-89775155	MS.gene80913:CDS
GCCGGTATCTTCGTTGTTAC+CGG	0.332457	7.3:-89771801	MS.gene80913:CDS
CGCCGTTGTGACAACGCGTT+TGG	0.332748	7.3:+89775104	None:intergenic
ATGCAAACATTTGGTACAAT+AGG	0.339118	7.3:+89767189	None:intergenic
TGGCTGTGTTGCCAGCATTA+TGG	0.349017	7.3:-89769045	MS.gene80913:CDS
TCAAAGATAACATTCCAAAA+TGG	0.351156	7.3:-89770257	MS.gene80913:CDS
TTTCAGAGGGATTTGCCAAT+AGG	0.372116	7.3:-89769468	MS.gene80913:intron
TGTGTTGCCAGCATTATGGC+TGG	0.373393	7.3:-89769041	MS.gene80913:CDS
TCTCGATTTCCTGCTGTTGT+TGG	0.376719	7.3:-89770432	MS.gene80913:CDS
CGATTTCCTGCTGTTGTTGG+AGG	0.386552	7.3:-89770429	MS.gene80913:CDS
AGGCTTCCAATTATGCCTAT+TGG	0.388084	7.3:+89769453	None:intergenic
CCTTGTTGGTCTCTATGTTC+AGG	0.391513	7.3:-89769259	MS.gene80913:intron
AGCATATCTATATACATATA+CGG	0.397472	7.3:-89770406	MS.gene80913:CDS
CTTCATTCTCAGATTTGGGT+TGG	0.398047	7.3:-89769065	MS.gene80913:CDS
CAGTGGGGTCAGCATGATAC+TGG	0.398852	7.3:+89766970	None:intergenic
AAGACGGGTCTTATACCATT+TGG	0.403482	7.3:+89769922	None:intergenic
CATTTGACCTTATCCTTCTC+GGG	0.407313	7.3:-89775029	MS.gene80913:CDS
GGCACCGTTGCTCACACTTC+CGG	0.408115	7.3:-89774967	MS.gene80913:CDS
ATGGTTCCATACAGTCTTCT+AGG	0.408151	7.3:-89769381	MS.gene80913:CDS
TCTAGGAGAAGAAGCTCCTT+TGG	0.410647	7.3:-89769364	MS.gene80913:CDS
GTAGTCTTCTTTGCGTATGT+TGG	0.421190	7.3:-89769886	MS.gene80913:CDS
GGCTATATCTTGGACTTGGC+AGG	0.423128	7.3:-89769142	MS.gene80913:CDS
TTGGTCTCATTTCTGGTCAT+CGG	0.429321	7.3:-89775136	MS.gene80913:CDS
ACTCATTGAGGTGGTTCCTC+TGG	0.431209	7.3:+89766918	None:intergenic
CTCCGATTCCAAGAAGTATA+AGG	0.433685	7.3:+89771835	None:intergenic
TTGAGGTTGATGTTTCCAAC+TGG	0.433700	7.3:-89769957	MS.gene80913:CDS
AATCGGAGCTAAGGCATTGA+TGG	0.434753	7.3:+89770200	None:intergenic
GTGAGAAGTATTAGTAGAAT+CGG	0.435463	7.3:+89770183	None:intergenic
GAGCAGTCTCGGCTATATCT+TGG	0.442697	7.3:-89769152	MS.gene80913:intron
CTCACTATAATTCTCTGTCT+TGG	0.443992	7.3:-89770165	MS.gene80913:CDS
GTTTCTATTCTGATTAGCAT+TGG	0.444221	7.3:-89769309	MS.gene80913:CDS
TGGTCTCCGTTTGTTCCAAA+TGG	0.449673	7.3:-89769937	MS.gene80913:CDS
GACCTTATACTTCTTGGAAT+CGG	0.452507	7.3:-89771837	MS.gene80913:CDS
CTCGGGATCGGTGCTTCCAT+CGG	0.455652	7.3:-89775012	MS.gene80913:CDS
TTAAAGAAGATGCAAACATT+TGG	0.456562	7.3:+89767180	None:intergenic
GACCTTATCCTTCTCGGGAT+CGG	0.460640	7.3:-89775024	MS.gene80913:CDS
GAAGAGGGGTGTGGCGTTTG+GGG	0.463035	7.3:+89769084	None:intergenic
GCTGTTTCTGGATTTGCTGC+GGG	0.465037	7.3:-89768025	MS.gene80913:CDS
GCCGGTATCTTCGTGGTCAC+CGG	0.468626	7.3:-89774988	MS.gene80913:CDS
TGAACTTTAGCAAATATTGC+GGG	0.468776	7.3:+89769107	None:intergenic
TATCTTGGACTTGGCAGGGA+TGG	0.469596	7.3:-89769137	MS.gene80913:CDS
CTATCACACATTCTTTCTGT+TGG	0.475825	7.3:-89768999	MS.gene80913:CDS
CTTATACCATTTGGAACAAA+CGG	0.475959	7.3:+89769931	None:intergenic
CGTGGTCTTTCCCGTCGGCT+TGG	0.477583	7.3:-89771867	MS.gene80913:CDS
CTTACAACAGCACTCCTTGT+TGG	0.477977	7.3:-89769273	MS.gene80913:CDS
AACAATAGTTTCGTCTGCAG+TGG	0.482915	7.3:+89766953	None:intergenic
AACGAAGATACCGGCACCGA+TGG	0.483739	7.3:+89771809	None:intergenic
ATCGGTGCTTCCATCGGTGC+CGG	0.487474	7.3:-89775006	MS.gene80913:CDS
GATAACATTCCAAAATGGAT+TGG	0.488211	7.3:-89770252	MS.gene80913:CDS
CATGTGTTGTTGTACTTCGC+TGG	0.488780	7.3:-89768117	MS.gene80913:CDS
GTGTTGCCAGCATTATGGCT+GGG	0.490837	7.3:-89769040	MS.gene80913:CDS
TCTTGCTCTTCATTTCCGCC+AGG	0.496565	7.3:-89767933	MS.gene80913:intron
ATGAAGATGATGAAGGAGGA+GGG	0.497643	7.3:+89775169	None:intergenic
TCTTCTCCTAGAAGACTGTA+TGG	0.498213	7.3:+89769375	None:intergenic
AATTCTATACATACCAGGTC+CGG	0.500164	7.3:+89774948	None:intergenic
CCGAGAAGGATAAGGTCAAA+TGG	0.501324	7.3:+89775030	None:intergenic
CGTGGTCTAACCCGCCGGCT+TGG	0.501798	7.3:-89775054	MS.gene80913:CDS
GATTTAAAAGCTTCAGCCAA+AGG	0.508670	7.3:+89769348	None:intergenic
CACGAAGATACCGGCACCGA+TGG	0.509856	7.3:+89774996	None:intergenic
ACAATAGTTTCGTCTGCAGT+GGG	0.509979	7.3:+89766954	None:intergenic
CACCGATCCCGAGAAGGATA+AGG	0.509992	7.3:+89775022	None:intergenic
GTTTATGCAGCGGATTCAGT+AGG	0.512220	7.3:-89767231	MS.gene80913:CDS
CCGGCGGGTTAGACCACGAT+TGG	0.514096	7.3:+89775059	None:intergenic
CATTCTTTCTGTTGGTACGC+TGG	0.514365	7.3:-89768991	MS.gene80913:intron
TAACATGTTCTTATTTGGCC+AGG	0.516841	7.3:-89767160	MS.gene80913:intron
CTTGGAATCGGAGCTTCCAT+CGG	0.527576	7.3:-89771825	MS.gene80913:CDS
AGGCATAATTGGAAGCCTCT+TGG	0.530309	7.3:-89769448	MS.gene80913:CDS
ATCGGAGCTTCCATCGGTGC+CGG	0.531766	7.3:-89771819	MS.gene80913:CDS
TATGCTCCTCCAACAACAGC+AGG	0.532375	7.3:+89770423	None:intergenic
CATCGGTGCCGGTATCTTCG+TGG	0.534558	7.3:-89774995	MS.gene80913:CDS
TCTCGGCTATATCTTGGACT+TGG	0.534605	7.3:-89769146	MS.gene80913:CDS
TTTGGTACAATAGGAACTCC+AGG	0.535491	7.3:+89767198	None:intergenic
GGAAGTGTGAGCAACGGTGC+CGG	0.536948	7.3:+89774969	None:intergenic
ATTCTAAGCATTCTTATGGT+CGG	0.538022	7.3:-89767011	MS.gene80913:CDS
GCCGGTGACCACGAAGATAC+CGG	0.538413	7.3:+89774987	None:intergenic
TACAGCTACATCATGAAGCA+TGG	0.539979	7.3:-89767046	MS.gene80913:intron
TGAAGATGATGAAGGAGGAG+GGG	0.540735	7.3:+89775170	None:intergenic
TACAGTAGCTCCTGTAAAGA+CGG	0.545158	7.3:+89769906	None:intergenic
CTTGCTATAGTTGTTGCAGT+CGG	0.547457	7.3:-89767962	MS.gene80913:CDS
AACGTCATGAGCAACGGTGC+CGG	0.551795	7.3:+89771782	None:intergenic
GTTGCTCACACTTCCGGACC+TGG	0.552278	7.3:-89774961	MS.gene80913:intron
TGTTGTTGTACTTCGCTGGA+AGG	0.552915	7.3:-89768113	MS.gene80913:CDS
TATTAGTAGAATCGGAGCTA+AGG	0.553069	7.3:+89770191	None:intergenic
ATTGTACATTGGAGTATGCT+TGG	0.554345	7.3:-89769415	MS.gene80913:CDS
AAGCAGCCCAGCCATAATGC+TGG	0.555365	7.3:+89769034	None:intergenic
ACCACGATTGGAATTGTCAC+GGG	0.555963	7.3:+89775071	None:intergenic
TGCTGTTTCTGGATTTGCTG+CGG	0.556606	7.3:-89768026	MS.gene80913:CDS
TTTATGCAGCGGATTCAGTA+GGG	0.557373	7.3:-89767230	MS.gene80913:CDS
CCCAAATCTGAGAATGAAGA+GGG	0.557797	7.3:+89769069	None:intergenic
AGATAATTGATGTTTCATAA+CGG	0.563069	7.3:+89767993	None:intergenic
TCTTGGTGTTAGAGAATCAT+CGG	0.563890	7.3:-89770148	MS.gene80913:CDS
GCCGGTAACAACGAAGATAC+CGG	0.564677	7.3:+89771800	None:intergenic
ATTGAATTGATAACTCATTG+AGG	0.574290	7.3:+89766906	None:intergenic
GTCAAAGACACCAAGCCGAC+GGG	0.574354	7.3:+89771857	None:intergenic
GTATGTATTGCATTGTACAT+TGG	0.579606	7.3:-89769426	MS.gene80913:CDS
ATGCTTGGTGATTACTGGAA+TGG	0.581981	7.3:-89769400	MS.gene80913:CDS
GTTGCTCATGACGTTGGACC+TGG	0.582954	7.3:-89771774	MS.gene80913:intron
GTCAAATGGACCAAGCCGGC+GGG	0.582991	7.3:+89775044	None:intergenic
CCAATCGTGGTCTAACCCGC+CGG	0.589035	7.3:-89775059	MS.gene80913:CDS
AGTATCTTCAGCTAAGCGGC+GGG	0.590169	7.3:-89768074	MS.gene80913:CDS
GATGAAGATGATGAAGGAGG+AGG	0.590841	7.3:+89775168	None:intergenic
GTGAACTTTAGCAAATATTG+CGG	0.592167	7.3:+89769106	None:intergenic
TGCTCTCTAGGTTTATGCAG+CGG	0.593099	7.3:-89767241	MS.gene80913:intron
TGAAGAATCTAAGAAGCCAC+AGG	0.593382	7.3:-89769839	MS.gene80913:intron
GCTATATCTTGGACTTGGCA+GGG	0.593905	7.3:-89769141	MS.gene80913:CDS
TTCGTTCATGACAGTGACCA+AGG	0.597319	7.3:-89770118	MS.gene80913:intron
GACCACGATTGGAATTGTCA+CGG	0.597365	7.3:+89775070	None:intergenic
GATGATGATGAAGATGATGA+AGG	0.597392	7.3:+89775162	None:intergenic
TCTTCAGCTAAGCGGCGGGA+AGG	0.597566	7.3:-89768070	MS.gene80913:CDS
TGGAACAAACGGAGACCAGT+TGG	0.600173	7.3:+89769942	None:intergenic
TCTGAGAATGAAGAGGGGTG+TGG	0.600264	7.3:+89769075	None:intergenic
ACAGCTACATCATGAAGCAT+GGG	0.602498	7.3:-89767045	MS.gene80913:intron
CTGGACGTGGTCTTTCCCGT+CGG	0.602680	7.3:-89771872	MS.gene80913:CDS
GGTCAAAGACACCAAGCCGA+CGG	0.603693	7.3:+89771856	None:intergenic
ACAGTAGCTCCTGTAAAGAC+GGG	0.606123	7.3:+89769907	None:intergenic
GAATTGATAACTCATTGAGG+TGG	0.607223	7.3:+89766909	None:intergenic
GGCACCGTTGCTCATGACGT+TGG	0.607562	7.3:-89771780	MS.gene80913:CDS
GATGATGAAGATGATGAAGG+AGG	0.608122	7.3:+89775165	None:intergenic
AATGCTTGACTATCATATTG+GGG	0.616231	7.3:-89770343	MS.gene80913:CDS
TGTTTATCATGAAGCTCCAG+AGG	0.619676	7.3:-89766934	MS.gene80913:CDS
ATCCAAACGCGTTGTCACAA+CGG	0.620710	7.3:-89775106	MS.gene80913:CDS
TAAGGTCAAATGGACCAAGC+CGG	0.621901	7.3:+89775040	None:intergenic
GCTCGCGATAATTCTGGACG+TGG	0.625163	7.3:-89771885	MS.gene80913:CDS
TGGAAGCACCGATCCCGAGA+AGG	0.625678	7.3:+89775016	None:intergenic
GAATGTTATCTTTGAAAACA+GGG	0.627722	7.3:+89770265	None:intergenic
ACCCAAATCTGAGAATGAAG+AGG	0.633728	7.3:+89769068	None:intergenic
AAGTATCTTCAGCTAAGCGG+CGG	0.636037	7.3:-89768075	MS.gene80913:CDS
AGGTCCAACGTCATGAGCAA+CGG	0.636276	7.3:+89771776	None:intergenic
GCCCGTGACAATTCCAATCG+TGG	0.638338	7.3:-89775072	MS.gene80913:CDS
ATTCCAAAATGGATTGGACA+TGG	0.639496	7.3:-89770246	MS.gene80913:CDS
GGTCAAATGGACCAAGCCGG+CGG	0.641177	7.3:+89775043	None:intergenic
CAGAAACAGCAACAGCAATG+AGG	0.643820	7.3:+89768038	None:intergenic
GTTGTTGTACTTCGCTGGAA+GGG	0.646755	7.3:-89768112	MS.gene80913:CDS
ACAGAGTGCATTTATAACAC+AGG	0.665366	7.3:+89770470	None:intergenic
ATTGGACATGGTCTAGACAT+CGG	0.667606	7.3:-89770234	MS.gene80913:CDS
AGGTCCGGAAGTGTGAGCAA+CGG	0.672245	7.3:+89774963	None:intergenic
TTGGTACAATAGGAACTCCA+GGG	0.688639	7.3:+89767199	None:intergenic
ACAATGCAATACATACCAAG+AGG	0.689157	7.3:+89769433	None:intergenic
TCGAAGTATCTTCAGCTAAG+CGG	0.713382	7.3:-89768078	MS.gene80913:CDS
CCTGAACATAGAGACCAACA+AGG	0.716194	7.3:+89769259	None:intergenic
CCAAATCTGAGAATGAAGAG+GGG	0.734973	7.3:+89769070	None:intergenic
CAATAGTTTCGTCTGCAGTG+GGG	0.739028	7.3:+89766955	None:intergenic
CAAACGCGTTGTCACAACGG+CGG	0.759849	7.3:-89775103	MS.gene80913:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr7.3	gene	89766920	89775211	89766920	ID=MS.gene80913
chr7.3	mRNA	89766920	89775211	89766920	ID=MS.gene80913.t1;Parent=MS.gene80913
chr7.3	exon	89774962	89775211	89774962	ID=MS.gene80913.t1.exon1;Parent=MS.gene80913.t1
chr7.3	CDS	89774962	89775211	89774962	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89771775	89771915	89771775	ID=MS.gene80913.t1.exon2;Parent=MS.gene80913.t1
chr7.3	CDS	89771775	89771915	89771775	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89770119	89770525	89770119	ID=MS.gene80913.t1.exon3;Parent=MS.gene80913.t1
chr7.3	CDS	89770119	89770525	89770119	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89769840	89770016	89769840	ID=MS.gene80913.t1.exon4;Parent=MS.gene80913.t1
chr7.3	CDS	89769840	89770016	89769840	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89769260	89769484	89769260	ID=MS.gene80913.t1.exon5;Parent=MS.gene80913.t1
chr7.3	CDS	89769260	89769484	89769260	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89768992	89769168	89768992	ID=MS.gene80913.t1.exon6;Parent=MS.gene80913.t1
chr7.3	CDS	89768992	89769168	89768992	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89767934	89768161	89767934	ID=MS.gene80913.t1.exon7;Parent=MS.gene80913.t1
chr7.3	CDS	89767934	89768161	89767934	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89767161	89767253	89767161	ID=MS.gene80913.t1.exon8;Parent=MS.gene80913.t1
chr7.3	CDS	89767161	89767253	89767161	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1
chr7.3	exon	89766920	89767063	89766920	ID=MS.gene80913.t1.exon9;Parent=MS.gene80913.t1
chr7.3	CDS	89766920	89767063	89766920	ID=cds.MS.gene80913.t1;Parent=MS.gene80913.t1

Gene Sequence

>MS.gene80913

ATGGCAATGCAAATCACTTCCCCTCCTCCTTCATCATCTTCATCATCATCTTGTTGGTCTCATTTCTGGTCATCGGCGCTTCGATCCAAACGCGTTGTCACAACGGCGGAGAAGACAGCCCGTGACAATTCCAATCGTGGTCTAACCCGCCGGCTTGGTCCATTTGACCTTATCCTTCTCGGGATCGGTGCTTCCATCGGTGCCGGTATCTTCGTGGTCACCGGCACCGTTGCTCACACTTCCGGACCTGGTATGTATAGAATTTTAACTTTAACTCAACACATTTTTTACTCAAGAAAGTTAATTGAGAGAGGGAACATCCATCTTGTATGTCCAATAAAACCTGGGACAATCATACTTCATCATGCTTATAACATGTTTCATTTTTTTGACAAAATGATTATAACATGGTTATAAAAATAAATTAGTATAATTTTTATGTTAGATTTTTTTTTTTTATAAGAATGATATATATGTATCTCAAGATGTATAACAAGCAACATGTTGGTTAGGTACACTCCGTAAAAAAAAAAAAAAAGATGTTGCTTAGGTACATCCACAATATTTCTATAAAAATAATATTAGTTTTTTTTTGAAGGAAAAAAAATAATATTAGTTTTGTAAATCAATTTTGTCAATGTAATGAATAATATACCTTTTAGATATTAAAAGCAAAATTTAAAAGATATTAACGGTCAATGTAAATCAATTTTGCTTGTTGACCTTCAATTCTGGTGGGGATTGTTTGTGTGTGGTTTGTTCACTAGTTTGAGCTCTTTGTTTGTTTTATGATTTGATTTTTAGGTTGTTGTAAGTTGATACTTTAGTCTCATTTCCAAGCACAATTGTGTTGGACATGAGGCATTGACAATTTTATTATATTTCATTTTAGGTTCTTAAAAATAAATTCTAACCATAATATAATTTACAAGTTTGTCATATACTCTTACTTTTGTAACAATATTTTCAAAATAATAGAATATATAGAAAAGAAATGCTCCTATTAGACATTAGTATAAAGCGTTTTCCAAAATATATTAGTATAAAATAAAATTTTCAATTCATCTTCTTTAGGAGTCTATCCTATATGTCCATGTAAGCTTAATTCAATTGATAGATTCATTGCATAATATGTACGTGGTCGAGAATCAAATTTCAGACAACTCACTTTTTTTCGTTGAGTCTCTGTCTTTGTTCCTTATTCACCTTATATATGTAAATTTTTAGCAACTAGATTATTTGACGAAAAAAAATGTATCCAATATTTTAGTTGAAAGTGGTGTGCTCTACGCTAGCTATCACATACTTGACATGACCTATAAAATGCAGGCTCGATACCTCACAAACGGAGATACCAAACACGCAACAAATATCATTTTCAATGACGGTATCTCACACAATAAGCATAGTTTAATGTATATTAACAAATAAGGTGTATGTAAAATTTATTTACATAGACTAAATATATCTCTTAATACTTGAAAAGTTTATTTATTATAATAATTTTATTCATATTTAATTTTATATTTTATTAAAGTATAATATTTTAATCTTATAGAAAAGTAAAAGTATCTTATGTTTAATCTTATGAATATTTATGATTTTATAAGAATGATCACAAATATATTTATTTATCTCTTAATTTAAAAACAAAAAAAAGGTATGATGGGTTTGATAGTGATTGAAGTGTGGGGCGTGATTGAATCCAATCTCAACCATAATCTGTACCTACATTTTATTACCTCTCTTTTATTTTTGGTGATATATTTTTTATAACAAAATGCTCAAGTGAACACTTGACCAAAAAAAAAAAAGCCCAAATGAATTTGTTCTATAATCAATTAAGGTCATAAGAAACCTCAAAACTCAATAAACTCTAACAAAGACATTTACGTATCATCGATTAAAGAGGTGTTCACGTTAATAGTGACATTCAAATCAATATGTTTTTAGGGCATATTGAGTGAACTTCTTAATTGCAAAGTTGTTGATAGAAATATACTCTTTTTTTCTCGAGTTGTGTTATTTGAACATCCATACATGTGACAACTTTTGTGACAACCAAAATTTTATAAAGGAAATGAGATATTGACACAAAAACTAAAGTAATAGAGAGAGAAAGTAAAAAGATAATGTGAGTATGAGAGAGAAAGTTGTCACAAAATGGATGTTCAAATATCATTTCTCTTTTTTCTCCACCTTAAAAATTAGGTATTGTTTTGTAGACACCCCTAGACACTCATTCTACATTTCATATAAGCTTCGGATATTAAATAATGATCTTGTTAACGAGTGCTCCCGAGATACTCCTTAATCATACTAAAATAAGCAATTATCTTTTTAAAAAATCAAATATTTCGATTTCCAATGCAATAATTACATGTATTTTCATAAATACTTGTTACTTATGATCTTTAAAGAGTGCCCAGGAGCACTCATTAACATTTGAGAAATGCTTGGAACACTCTCTTTATAACACTCTCTCTAACACCCACTCTCCTATTGAGTGAAACACATGTGGGTCTCACCACTTTATGTGGGATCCATTTCCAAAGTGTGGTACCCACATGTGTTCCATCCAATAGGAGAGTGGGTGTTAGAGAAAGTGTTAGAAGAGAGTGTTTCTAGCATTTCTCTTAACATTTTCCATCAAATAAATGGATGGGTGTCTTCGAACATCAGCCCAAAAAATATGGTAAATGTATCTAACCAAGATGTTGGTTGTTGTACATCTTAGCATACAAGTAAAACAAAATTTTGCTAAAAAAGCAAGTAAATAAATCAAACCTTTTTTTAAACAAATAAAGTAAATAAATTAATTAATTTAATTTTGACAATAAAAGTAAGTAAATTAATTAAAACCATTTTATTCATCAAAGTGCAGATAACATTTTCTTCACTATATTCTTTTTCTTCTTAATTACTTGTTCTTCCCATCTCAATTTATACAACATTTAAATTTTTAAATTTATTTAATAAACAACGTATTTGATCTATATTACAGACCAAATACATTAGTTATTTAATTTTTTTTTCTTCTATTAAGTATTTTCAATTTTGATTTGCTTCCAAATCACGTTTCTTCCTTCATCATGAAGATGGAAGCTGGTAACTTCACCTGAACCCAAATAACACTTTCTTCTTCACTCATTCAAATTGCTACGAAAAAAGAAAAACCATGGGAATTCGTAGCAATTCTCCTTCTTCATCATTTTCTTCATCTTCGTCATCTTCTACGTGTTGTTCACGTTTCTTGTCATCGGCACTCCGATCCAAACGCGTCATCTCTCCATCAGAGAAGACAGCTCGCGATAATTCTGGACGTGGTCTTTCCCGTCGGCTTGGTGTCTTTGACCTTATACTTCTTGGAATCGGAGCTTCCATCGGTGCCGGTATCTTCGTTGTTACCGGCACCGTTGCTCATGACGTTGGACCTGGTATGTGGAGAATTTTTCAATTTATTTACTATTCCAGTCTTAAATATAAGAAAAGAAAAAGAAAAAAAAAAGTCGAACATAATTAATGTATCTGGTTAAAGATTTGAACCAGATACATTTATTTTGTTTGACTTTTTTATCTTGTATTCGAGAGCGAAGTAACTCAATTATCAATTGACAAGTGTTTATCATATATAAGTGCTTATGTATAAGTTCATTTTATATAAGCGATAGCTATTTTGGAGACTTTATGGAAATGAGGTGTAAACAGTTTATGATATGTCATAAGTTGTTTTTGTTTATTTGGAATAGTCTCGTAAGTGTTTATGTAAGTAGATAAGCTCAATTATTAAGGCCTTGCTTGGATAAACAAAATTAATGGCTTATAACGTAAGTGCTGATAAATTGCTTATGTATAAGCTGTTTTTACTTTTTATAGCGAAAGATAAAATAAGTTAGACCGTTTTTATATAAGGCATAAGCTGTTTTTGTAAGCTATTCTAGTGAGATTATGGAAATAAGCTGAAAATAGTTTATGGAGATGTCTGTAAGCTGTTTTCATAAGCTCTCTCAAACAGTCTCACAAGTGATTATGTCAGGAGATAAGCTCAAATAAGCTAATCCAAATAGGCCTTAAATAGAGAGATATTTGTATAAAATGAAATATTATCTTATACAAGCTCAAAATGGAGCTTTGTTCTTCAGTATAAACAGTTAGGATGCTTTCGATTTTTGTGTTTTGCATATGATATTGATTGAATATTGAATTTTCTTCAGTAAGGGTGTTTCCAGTATTTGAGTTGATACCCTAGAAATGACATATACGACATGGAAGTGATTAAGTGAAAGTGAACTCTACACCATACACATAGATACTCATACCGGTAATAATTTGAGAAAATAGAAGTAATTAAATACACATGTGTGAGTTGAGTACTGTGTCATTGACACTTTTCTGACACCAAACACGCCTTTAGTTAAGTTTGCATTAGTTATTGCAGACATATAATATTATCATTTATCTATTTATTATGGTATCTTAGTTATATTGGAGGATGTGTAGGCTAAAAGGGTATCTAATGTGCTGTGATAATGAACAATGCTTACTTGTTATCTTGAAAAATCAATCTTAATTACACATTTATCTATGTACATCTGCTTTAAGATAATGATCATGGACATGTGATGGTTATTTTGCTGTTATAGTTCCAAACTTTGTGGCTTATTCTGGTTTCTTTCTGTAATGCAGCGGTAACATTAAGTTTTATATTTGCTGGAGCATCCTGTGTTATAAATGCACTCTGTTACGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGTTGGAGGAGCATATCTATATACATATACGGCTTTCAATGAACTTACCGCTTTTCTTGTTTTTTCACAATTAATGCTTGACTATCATATTGGGGCAGCTAGCATAGCAAGAAGTTTAGCAAATTATATTGTTACATTTCTAGAGATCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGACATGGTCTAGACATCGGAAACGTCTTATCCATCAATGCCTTAGCTCCGATTCTACTAATACTTCTCACTATAATTCTCTGTCTTGGTGTTAGAGAATCATCGGCTGTGAATTCGTTCATGACAGTGACCAAGGTTCCTTTCCATCTTACCTAAAGTATTTAACATTGAGCAGTGTGTTAATGCTGCGGTTTCATGTGAGAAACGAATCACTAGTTATTTTACTGTCTTCTGCAGATAATCATTGTTATTGTTGTCATCTTTGCTGGAGCTTTTGAGGTTGATGTTTCCAACTGGTCTCCGTTTGTTCCAAATGGTATAAGACCCGTCTTTACAGGAGCTACTGTAGTCTTCTTTGCGTATGTTGGATTTGATGCAGTTGCCAATTCTGCTGAAGAATCTAAGAAGCCACAGGTTTATTGTCTTGATATTGCTCCAATGCTTTATGAATTTTTTAAATGTCATATCTGTTATCTGATGTTTCTGTTGAGAATGATAATGATGTTAGAAGTAAACGTTAACTGATGTTTCTATTTGAATTTTTGTATCATCTACCAGATGCCAAAGTCTATTGTTGATACTTTTACATTAATTATATTAGAAGTAAATAGTAGATATTCGGATTTTAAATAGTTGTTATAAATTAACTATAAGTCCTTCTGTGAATCTAATAGTCCAACTCAACAGACGTGTAACAAAAACTATCTTGCAATAATGTATTCGTCTACTAATATTTTCTTTTTATCTTATCTTATTTTTGACATTTCAGAGGGATTTGCCAATAGGCATAATTGGAAGCCTCTTGGTATGTATTGCATTGTACATTGGAGTATGCTTGGTGATTACTGGAATGGTTCCATACAGTCTTCTAGGAGAAGAAGCTCCTTTGGCTGAAGCTTTTAAATCTAAGGGATTAAAATTTGTTTCTATTCTGATTAGCATTGGTGCTATTGCTGGACTTACAACAGCACTCCTTGTTGGTCTCTATGTTCAGGTGAATCACGTTCACGTCGTAATACTGATTGATGTGCCGGAGGCATGTGCTTATTTACATACATGACAGGTTTTTTCTTTCTGATGAGCAGTCTCGGCTATATCTTGGACTTGGCAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACCCCAAACGCCACACCCCTCTTCATTCTCAGATTTGGGTTGGCTGTGTTGCCAGCATTATGGCTGGGCTGCTTAATGTGCGCATGCTATCACACATTCTTTCTGTTGGTACGCTGGTAAGAATCGATTTCTAAGATCATGGTAGTCAACAAAATGCATATATGTTCTATCTCATCTTGTAATACTAAGTAGTATTTATGAAGTCCAAATACTTCAAAATTGATAAAGTATCCATGTTCTATACAAGGTTGTGGGACATTAGTGGAGATGCACATGACCCACTTGACAATAGTGGCTTAAAATCATGGTAGATTTATAGAATTATCAGAGTTGTCTCTTAATGAACCATACTAAAAAGCTTTACCTTTTTCAATAATGAGCATGTGCGAGATAAAAATTGGCAATTGAATTGAGTCAAAACTTCTTTTAAATAGGTCCAACGTTGCTTTTTGCGACATTCCGACATTGGTAGGGTTAGTCCGGTTAGAAATACTTATATTTTTTGACATGATTATAGGGAAAAAATACTTTGGGTATGGAAAAGTGTAACATATGTGCTTATTAAAAGTGTGCATGTGTTCTTTTGTTATGATAAGCGTCTTTTTGTAAATTGTGATCATTACCTGTTGGTATGGTTATATATCATTTAGAAATTAGAAATATCGTTGTGTTTGGGTGTGTGTATTTGTTTGTATTCGGGTATCTAAGTCATATCATATTTTAAGAATTTCTTATATCCGTATTGTACCCGGGCTTCATTCTGTCTGATGATGTGTTTCTATACATCAGACGCACCAATAGAATCTAACCATGTTTAATGCATTCGGAGTCCATTTAGCAAATAATACCACATTGCTGTGCTTTGACTAAAATACTCATTATAGTTGAATAATGTTTGTAAATAGTCGTATATAACGCCCACACCTGATATTTTTACTTATTTCAGACTGGCTATTCAGTTGTCTCAGCATGTGTTGTTGTACTTCGCTGGAAGGGTAAGACAAATATCGAAGTATCTTCAGCTAAGCGGCGGGAAGGTGTAATTTGCCTCATTGCTGTTGCTGTTTCTGGATTTGCTGCGGGACTCTTGTTCCGTTATGAAACATCAATTATCTTTGTGATTCTTGCTATAGTTGTTGCAGTCGGTGCTTCTCTTGCTCTTCATTTCCGCCAGGTCAGTGTTATTTTTTTTTAGTTTTGTTAAATATCTAATGATTAGACTGCAAATTTCAAAATTGCCATGTTAGAAATCAATGTACCACTGACCTGTAAATAATTGATGTCCTATTTTGTTCTTTGACAAGGTATAGAATAACTGTAGTTAGTTTTAATTCAATCTTGTCATTATAAAGGAGGGAAAATATCATAAAATTGTCTGTTGGTTGGTATTGTGTATTTCACTGCTATTTTGTGAAATATTAAGAAGTTAAATTAAATGTACTTCACATAATTATTCCAATTGAACAAAAATCATGTTGATTTGCAAATATTCATTTATGTCTATTGTCTAATATTGATTAACAAAATATTAGTATTTATTTAAAAAATTAAGAAAGCGAATGTCATCTTATGTAATAAAAAACGAAGGACCTAAATATTTTGATTTGATTTAATATGGAAGTTCAGAATACATCTCACAACAGGAAGAAAACAAGTGATCACTTCATGAGCAGGAGGGTACGGCACGGCTTCGTGAGAAGAAGATTAAGTACTGAGGTTATCTCAGGACTAGTTCTGACATACTTATCAGACATAATAACATTTCACTTTTTGTAACTTATGAGCGTCCATTTTGAATTTCGATGTTGATTTCTCTCAATAATAACGTTCTGTTTTTATCATTTTGCTCTCTAGGTTTATGCAGCGGATTCAGTAGGGTTTTCTTGCCCTGGAGTTCCTATTGTACCAAATGTTTGCATCTTCTTTAACATGTTCTTATTTGGCCAGGTACGTCCACCATCTCTTCGTTTTGAAATTTTAGCCAAAATAATACCATATATTTTACGAGGTTAAAGTTGATTATTTTATGAACTTCTGTTTACAGCTACATCATGAAGCATGGGTGAGATTTGTGATTCTAAGCATTCTTATGGTCGGAGTTTACGCGATATATGGCCAGTATCATGCTGACCCCACTGCAGACGAAACTATTGTTTATCATGAAGCTCCAGAGGAACCACCTCAATGA

Protein sequence

>MS.gene80913.t1

MAMQITSPPPSSSSSSSCWSHFWSSALRSKRVVTTAEKTARDNSNRGLTRRLGPFDLILLGIGASIGAGIFVVTGTVAHTSGPEKTARDNSGRGLSRRLGVFDLILLGIGASIGAGIFVVTGTVAHDVGPAVTLSFIFAGASCVINALCYAELASRFPAVVGGAYLYTYTAFNELTAFLVFSQLMLDYHIGAASIARSLANYIVTFLEIFPVFKDNIPKWIGHGLDIGNVLSINALAPILLILLTIILCLGVRESSAVNSFMTVTKIIIVIVVIFAGAFEVDVSNWSPFVPNGIRPVFTGATVVFFAYVGFDAVANSAEESKKPQRDLPIGIIGSLLVCIALYIGVCLVITGMVPYSLLGEEAPLAEAFKSKGLKFVSILISIGAIAGLTTALLVGLYVQSRLYLGLGRDGLLPAIFAKVHPKRHTPLHSQIWVGCVASIMAGLLNVRMLSHILSVGTLTGYSVVSACVVVLRWKGKTNIEVSSAKRREGVICLIAVAVSGFAAGLLFRYETSIIFVILAIVVAVGASLALHFRQVYAADSVGFSCPGVPIVPNVCIFFNMFLFGQLHHEAWVRFVILSILMVGVYAIYGQYHADPTADETIVYHEAPEEPPQ