Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81187.t1 | XP_013452470.1 | 98.1 | 365 | 7 | 0 | 1 | 365 | 168 | 532 | 1.30E-206 | 728.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81187.t1 | Q8GYY0 | 61.7 | 363 | 139 | 0 | 1 | 363 | 133 | 495 | 2.0e-136 | 486.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81187.t1 | A0A072UBT9 | 98.1 | 365 | 7 | 0 | 1 | 365 | 168 | 532 | 9.1e-207 | 728.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06009 | MS.gene81187 | PPI |
| MS.gene55742 | MS.gene81187 | PPI |
| MS.gene048867 | MS.gene81187 | PPI |
| MS.gene89714 | MS.gene81187 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81187.t1 | MTR_6g463260 | 98.082 | 365 | 7 | 0 | 1 | 365 | 168 | 532 | 0.0 | 748 |
| MS.gene81187.t1 | MTR_5g011400 | 58.640 | 353 | 143 | 1 | 8 | 360 | 145 | 494 | 3.32e-159 | 456 |
| MS.gene81187.t1 | MTR_8g101750 | 48.105 | 343 | 177 | 1 | 14 | 355 | 81 | 423 | 1.59e-130 | 381 |
| MS.gene81187.t1 | MTR_6g091760 | 48.397 | 343 | 176 | 1 | 14 | 355 | 89 | 431 | 6.09e-129 | 377 |
| MS.gene81187.t1 | MTR_4g097540 | 46.429 | 364 | 184 | 4 | 13 | 365 | 79 | 442 | 7.64e-128 | 375 |
| MS.gene81187.t1 | MTR_5g015020 | 45.634 | 355 | 184 | 4 | 13 | 358 | 79 | 433 | 7.14e-124 | 365 |
| MS.gene81187.t1 | MTR_3g103550 | 46.875 | 352 | 183 | 1 | 13 | 360 | 78 | 429 | 1.96e-122 | 362 |
| MS.gene81187.t1 | MTR_8g098930 | 44.126 | 349 | 192 | 1 | 13 | 358 | 87 | 435 | 1.65e-116 | 347 |
| MS.gene81187.t1 | MTR_8g101820 | 43.642 | 346 | 175 | 3 | 14 | 355 | 81 | 410 | 1.63e-114 | 339 |
| MS.gene81187.t1 | MTR_8g028600 | 42.775 | 346 | 198 | 0 | 13 | 358 | 86 | 431 | 6.08e-111 | 332 |
| MS.gene81187.t1 | MTR_7g079080 | 42.075 | 347 | 200 | 1 | 13 | 358 | 86 | 432 | 2.03e-106 | 321 |
| MS.gene81187.t1 | MTR_7g079080 | 41.590 | 327 | 190 | 1 | 33 | 358 | 1 | 327 | 1.88e-99 | 300 |
| MS.gene81187.t1 | MTR_5g033230 | 24.289 | 387 | 241 | 13 | 6 | 356 | 93 | 463 | 1.33e-21 | 96.3 |
| MS.gene81187.t1 | MTR_5g033230 | 23.876 | 356 | 221 | 11 | 6 | 326 | 93 | 433 | 2.91e-19 | 89.4 |
| MS.gene81187.t1 | MTR_2g090730 | 49.296 | 71 | 32 | 1 | 13 | 83 | 34 | 100 | 4.80e-16 | 76.3 |
| MS.gene81187.t1 | MTR_8g023140 | 20.718 | 362 | 260 | 12 | 16 | 354 | 154 | 511 | 1.52e-13 | 72.0 |
| MS.gene81187.t1 | MTR_2g090615 | 28.846 | 208 | 120 | 6 | 16 | 216 | 81 | 267 | 3.84e-13 | 70.5 |
| MS.gene81187.t1 | MTR_8g091280 | 21.581 | 329 | 237 | 9 | 6 | 326 | 122 | 437 | 1.81e-12 | 68.6 |
| MS.gene81187.t1 | MTR_7g106830 | 20.635 | 378 | 266 | 13 | 1 | 365 | 115 | 471 | 4.14e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81187.t1 | AT5G51690 | 61.708 | 363 | 139 | 0 | 1 | 363 | 10 | 372 | 1.13e-176 | 496 |
| MS.gene81187.t1 | AT5G51690 | 61.708 | 363 | 139 | 0 | 1 | 363 | 133 | 495 | 4.28e-174 | 494 |
| MS.gene81187.t1 | AT1G62960 | 57.778 | 360 | 150 | 2 | 8 | 365 | 198 | 557 | 4.44e-158 | 455 |
| MS.gene81187.t1 | AT4G37770 | 48.718 | 351 | 176 | 1 | 13 | 359 | 79 | 429 | 4.20e-130 | 381 |
| MS.gene81187.t1 | AT2G22810 | 47.619 | 357 | 182 | 2 | 13 | 364 | 79 | 435 | 1.02e-127 | 375 |
| MS.gene81187.t1 | AT3G49700 | 48.451 | 355 | 179 | 1 | 13 | 363 | 79 | 433 | 2.88e-125 | 369 |
| MS.gene81187.t1 | AT4G26200 | 47.714 | 350 | 177 | 2 | 14 | 359 | 95 | 442 | 4.27e-122 | 360 |
| MS.gene81187.t1 | AT5G65800 | 46.307 | 352 | 185 | 1 | 13 | 360 | 79 | 430 | 4.60e-122 | 360 |
| MS.gene81187.t1 | AT4G08040 | 45.272 | 349 | 190 | 1 | 13 | 360 | 77 | 425 | 1.70e-120 | 356 |
| MS.gene81187.t1 | AT4G11280 | 44.225 | 355 | 196 | 2 | 2 | 355 | 80 | 433 | 9.36e-117 | 348 |
| MS.gene81187.t1 | AT1G01480 | 41.972 | 355 | 202 | 2 | 13 | 363 | 87 | 441 | 5.37e-108 | 325 |
| MS.gene81187.t1 | AT3G61510 | 41.026 | 351 | 203 | 2 | 9 | 358 | 82 | 429 | 6.97e-108 | 325 |
| MS.gene81187.t1 | AT1G01480 | 41.791 | 335 | 191 | 2 | 33 | 363 | 1 | 335 | 1.23e-101 | 305 |
| MS.gene81187.t1 | AT1G70580 | 25.661 | 378 | 247 | 15 | 6 | 356 | 93 | 463 | 2.18e-22 | 98.6 |
| MS.gene81187.t1 | AT1G70580 | 25.661 | 378 | 247 | 15 | 6 | 356 | 93 | 463 | 2.18e-22 | 98.6 |
| MS.gene81187.t1 | AT1G70580 | 25.661 | 378 | 247 | 15 | 6 | 356 | 93 | 463 | 2.18e-22 | 98.6 |
| MS.gene81187.t1 | AT1G70580 | 25.661 | 378 | 247 | 15 | 6 | 356 | 93 | 463 | 2.18e-22 | 98.6 |
| MS.gene81187.t1 | AT1G23310 | 24.603 | 378 | 251 | 14 | 6 | 356 | 93 | 463 | 2.38e-21 | 95.5 |
| MS.gene81187.t1 | AT1G23310 | 29.282 | 181 | 123 | 4 | 6 | 184 | 93 | 270 | 2.01e-20 | 92.4 |
| MS.gene81187.t1 | AT1G17290 | 22.400 | 375 | 238 | 13 | 16 | 354 | 173 | 530 | 2.74e-18 | 86.7 |
| MS.gene81187.t1 | AT1G72330 | 21.714 | 350 | 229 | 12 | 44 | 360 | 196 | 533 | 1.23e-17 | 84.7 |
| MS.gene81187.t1 | AT1G72330 | 27.811 | 169 | 109 | 5 | 44 | 210 | 196 | 353 | 7.19e-17 | 82.0 |
| MS.gene81187.t1 | AT1G72330 | 21.289 | 357 | 223 | 12 | 44 | 354 | 196 | 540 | 3.56e-16 | 80.1 |
| MS.gene81187.t1 | AT5G36160 | 28.431 | 204 | 118 | 6 | 16 | 212 | 80 | 262 | 3.00e-14 | 73.9 |
| MS.gene81187.t1 | AT2G22250 | 20.968 | 372 | 260 | 12 | 6 | 364 | 122 | 472 | 4.09e-14 | 73.9 |
| MS.gene81187.t1 | AT2G22250 | 20.968 | 372 | 260 | 12 | 6 | 364 | 122 | 472 | 4.09e-14 | 73.9 |
| MS.gene81187.t1 | AT2G22250 | 20.968 | 372 | 260 | 12 | 6 | 364 | 75 | 425 | 4.09e-14 | 73.6 |
| MS.gene81187.t1 | AT2G24850 | 21.958 | 337 | 233 | 9 | 16 | 341 | 87 | 404 | 2.67e-12 | 68.2 |
| MS.gene81187.t1 | AT4G28420 | 24.121 | 199 | 137 | 5 | 16 | 214 | 98 | 282 | 1.81e-11 | 65.5 |
| MS.gene81187.t1 | AT4G28420 | 23.116 | 199 | 139 | 4 | 16 | 214 | 98 | 282 | 1.95e-11 | 65.5 |
| MS.gene81187.t1 | AT2G20610 | 23.116 | 199 | 139 | 4 | 16 | 214 | 104 | 288 | 4.57e-11 | 64.3 |
| MS.gene81187.t1 | AT2G20610 | 23.116 | 199 | 139 | 4 | 16 | 214 | 104 | 288 | 5.77e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATCAATTTGAGTATAAA+TGG | 0.236641 | 6.1:+55698834 | MS.gene81187:CDS |
| AGAAGACTGAAAAGCATTTC+TGG | 0.240255 | 6.1:-55701836 | None:intergenic |
| AGAAAGGAGAACTTGAATTA+TGG | 0.243969 | 6.1:+55702314 | MS.gene81187:CDS |
| TTCACACAACAAAACTGTTT+TGG | 0.255365 | 6.1:+55702051 | MS.gene81187:CDS |
| AGCACACTTGATTCCTAGTT+TGG | 0.291076 | 6.1:-55702230 | None:intergenic |
| TTCCGATAAACGATTCATTC+AGG | 0.315188 | 6.1:+55702144 | MS.gene81187:CDS |
| GTCGATTACCCTGGATAATA+AGG | 0.320746 | 6.1:-55701381 | None:intergenic |
| GCGCCTTATCAGTCATTTCA+TGG | 0.330357 | 6.1:+55698861 | MS.gene81187:CDS |
| AGAATTTGACCCGTCGAATA+TGG | 0.336104 | 6.1:+55701275 | MS.gene81187:CDS |
| TCAAAAGACCTCTCGATTGC+TGG | 0.361792 | 6.1:+55702007 | MS.gene81187:CDS |
| TTCCTGAATGAATCGTTTAT+CGG | 0.368687 | 6.1:-55702146 | None:intergenic |
| GAAAGGAGAACTTGAATTAT+GGG | 0.372458 | 6.1:+55702315 | MS.gene81187:CDS |
| AACGATAGTATCTCAATTGC+AGG | 0.378929 | 6.1:-55701318 | None:intergenic |
| AGTTCTCCTTTCTCGCTATA+AGG | 0.388101 | 6.1:-55702304 | None:intergenic |
| AAATCCCTCTAGTTATTGAT+AGG | 0.392176 | 6.1:+55702443 | MS.gene81187:CDS |
| CTCTAGTTATTGATAGGATT+CGG | 0.409149 | 6.1:+55702449 | MS.gene81187:CDS |
| GCACCCGTCTTATTCTATTT+CGG | 0.410492 | 6.1:-55702183 | None:intergenic |
| CTTGACTAAATGCTTGTTCA+AGG | 0.411999 | 6.1:-55701739 | None:intergenic |
| GTCCCTACACCTTATTATCC+AGG | 0.416731 | 6.1:+55701372 | MS.gene81187:CDS |
| ATTGCTGACGAAGTATTTGC+AGG | 0.422387 | 6.1:+55701890 | MS.gene81187:CDS |
| AGTGATTATGCAGCTTTGAC+AGG | 0.425900 | 6.1:+55701636 | MS.gene81187:intron |
| AGCCGCGTTCATATAGTATA+CGG | 0.426140 | 6.1:+55701980 | MS.gene81187:CDS |
| ATCAGACCTTATAGCGAGAA+AGG | 0.438192 | 6.1:+55702298 | MS.gene81187:CDS |
| GCAGCGCCGGTATGTTCTGT+TGG | 0.448478 | 6.1:+55702257 | MS.gene81187:CDS |
| AATCCATGAAATGACTGATA+AGG | 0.452940 | 6.1:-55698864 | None:intergenic |
| CAGCGCCGGTATGTTCTGTT+GGG | 0.459303 | 6.1:+55702258 | MS.gene81187:CDS |
| ATGCAATGGCAAGCCGATCC+AGG | 0.473529 | 6.1:-55702373 | None:intergenic |
| ACGGGTGCACGATGAGTTTG+TGG | 0.475034 | 6.1:+55702198 | MS.gene81187:CDS |
| GGTGTCTGAATATTGCCAAC+AGG | 0.479270 | 6.1:-55701815 | None:intergenic |
| GCTAAGATAAATATAACTCC+TGG | 0.479435 | 6.1:+55702355 | MS.gene81187:CDS |
| CCGTCTTATTCTATTTCGGT+TGG | 0.485045 | 6.1:-55702179 | None:intergenic |
| TCAGTACTTCGACAGTGAAC+AGG | 0.488659 | 6.1:-55701692 | None:intergenic |
| ATATTGCCAACAGGATTTGA+AGG | 0.498871 | 6.1:-55701806 | None:intergenic |
| AGGGACGTAAGATGGCGTCC+AGG | 0.510730 | 6.1:+55701656 | MS.gene81187:CDS |
| TCGAATATGGTACTAACATC+GGG | 0.516054 | 6.1:+55701288 | MS.gene81187:CDS |
| TGAGATACTATCGTTCTGCT+TGG | 0.519831 | 6.1:+55701326 | MS.gene81187:CDS |
| GTGGATTGTTTAACCAAACT+AGG | 0.523731 | 6.1:+55702217 | MS.gene81187:CDS |
| GTATTTGCAGGCTCCACGTA+CGG | 0.524369 | 6.1:+55701902 | MS.gene81187:CDS |
| GCTTTGACAGGGACGTAAGA+TGG | 0.539978 | 6.1:+55701648 | MS.gene81187:intron |
| GATAAATATAACTCCTGGAT+CGG | 0.540003 | 6.1:+55702360 | MS.gene81187:CDS |
| ACCATCCTGGTTCTATGCAA+TGG | 0.546338 | 6.1:-55702387 | None:intergenic |
| GATAATAAGGTGTAGGGACA+AGG | 0.549163 | 6.1:-55701368 | None:intergenic |
| TATTGCCAACAGGATTTGAA+GGG | 0.553952 | 6.1:-55701805 | None:intergenic |
| TCGATTGCTGGATTTAGAGT+CGG | 0.555133 | 6.1:+55702019 | MS.gene81187:CDS |
| ACAGGTATTAAGTCTATCCC+TGG | 0.566102 | 6.1:-55701674 | None:intergenic |
| TCCCTACACCTTATTATCCA+GGG | 0.567075 | 6.1:+55701373 | MS.gene81187:CDS |
| AAGTGTGCTAAGAGCAGCGC+CGG | 0.573828 | 6.1:+55702244 | MS.gene81187:CDS |
| GAAGTAACTAACCTCTGTGT+TGG | 0.575820 | 6.1:-55702115 | None:intergenic |
| GCCATTGCATAGAACCAGGA+TGG | 0.576139 | 6.1:+55702386 | MS.gene81187:CDS |
| ATATTCTGAATCGAGAACTT+CGG | 0.576552 | 6.1:-55701948 | None:intergenic |
| GTGATTATGCAGCTTTGACA+GGG | 0.578099 | 6.1:+55701637 | MS.gene81187:intron |
| AAACTCCTCGCTTCCGTACG+TGG | 0.582162 | 6.1:-55701915 | None:intergenic |
| ACCCTGGATAATAAGGTGTA+GGG | 0.583042 | 6.1:-55701374 | None:intergenic |
| CGAATCCTATCAATAACTAG+AGG | 0.584201 | 6.1:-55702448 | None:intergenic |
| TCGTTCTGCTTGGCAGACCA+TGG | 0.585867 | 6.1:+55701336 | MS.gene81187:CDS |
| AAACGAGGAGTCAAAGTTCG+CGG | 0.587306 | 6.1:+55701767 | MS.gene81187:CDS |
| TACCCTGGATAATAAGGTGT+AGG | 0.592046 | 6.1:-55701375 | None:intergenic |
| CAACCGAAATAGAATAAGAC+GGG | 0.592241 | 6.1:+55702180 | MS.gene81187:CDS |
| AAACAAATACGAAACCATCC+TGG | 0.595378 | 6.1:-55702400 | None:intergenic |
| GGGACGTAAGATGGCGTCCA+GGG | 0.596829 | 6.1:+55701657 | MS.gene81187:CDS |
| TTGACTAAATGCTTGTTCAA+GGG | 0.597175 | 6.1:-55701738 | None:intergenic |
| TCGAACCCTTCAAATCCTGT+TGG | 0.599882 | 6.1:+55701800 | MS.gene81187:CDS |
| GGACAAGGAATGCATTTCCA+TGG | 0.601989 | 6.1:-55701353 | None:intergenic |
| CTCTAAATCCAGCAATCGAG+AGG | 0.607302 | 6.1:-55702015 | None:intergenic |
| GCTTGCCATTGCATAGAACC+AGG | 0.608825 | 6.1:+55702382 | MS.gene81187:CDS |
| TTTATGCATCAGGTTATGGG+AGG | 0.621158 | 6.1:+55701246 | MS.gene81187:CDS |
| AGGCTCCACGTACGGAAGCG+AGG | 0.623216 | 6.1:+55701910 | MS.gene81187:CDS |
| GTCGAATATGGTACTAACAT+CGG | 0.632417 | 6.1:+55701287 | MS.gene81187:CDS |
| CCAACCGAAATAGAATAAGA+CGG | 0.633080 | 6.1:+55702179 | MS.gene81187:CDS |
| ATGTTAGTACCATATTCGAC+GGG | 0.633455 | 6.1:-55701284 | None:intergenic |
| GATGTTAGTACCATATTCGA+CGG | 0.633600 | 6.1:-55701285 | None:intergenic |
| ATCAGCCCAACAGAACATAC+CGG | 0.634233 | 6.1:-55702263 | None:intergenic |
| GAATCCTATCAATAACTAGA+GGG | 0.646614 | 6.1:-55702447 | None:intergenic |
| TTTAGTCAAGCAAGAAAACG+AGG | 0.661177 | 6.1:+55701752 | MS.gene81187:CDS |
| GGCCGTATACTATATGAACG+CGG | 0.756649 | 6.1:-55701982 | None:intergenic |
| CTATATCTGCACCAACACAG+AGG | 0.756871 | 6.1:+55702104 | MS.gene81187:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATAAGTTTATATTTAAA+TGG | + | chr6.1:55700885-55700904 | MS.gene81187:intron | 10.0% |
| !! | ATGTATAAAAACTATTTATA+AGG | + | chr6.1:55701535-55701554 | MS.gene81187:intron | 10.0% |
| !!! | TTTAAGATGAATAATTTTAT+AGG | + | chr6.1:55700137-55700156 | MS.gene81187:intron | 10.0% |
| !! | AATAAAATTAGATAGAAAGT+TGG | + | chr6.1:55700702-55700721 | MS.gene81187:intron | 15.0% |
| !! | TGTTATCATTAAATATTAAG+TGG | + | chr6.1:55699825-55699844 | MS.gene81187:intron | 15.0% |
| !!! | TAACTCTAAAATTAAAATGT+CGG | - | chr6.1:55700606-55700625 | None:intergenic | 15.0% |
| !!! | TGATGATGATTTTTAAATTT+TGG | + | chr6.1:55700018-55700037 | MS.gene81187:intron | 15.0% |
| !! | AATAAAATGTTGTCAAATAG+CGG | - | chr6.1:55699653-55699672 | None:intergenic | 20.0% |
| !! | ACAAAATTGCTAAAACTTAT+GGG | - | chr6.1:55699922-55699941 | None:intergenic | 20.0% |
| !! | ACAATATTAGAAAAAGAGTT+GGG | + | chr6.1:55699210-55699229 | MS.gene81187:intron | 20.0% |
| !! | AGAGATTAATGAGTTATATA+GGG | + | chr6.1:55699404-55699423 | MS.gene81187:intron | 20.0% |
| !! | CTTCTAGTATAATTGATTAA+TGG | - | chr6.1:55700117-55700136 | None:intergenic | 20.0% |
| !! | GATATCAATTTGAGTATAAA+TGG | + | chr6.1:55698834-55698853 | MS.gene81187:CDS | 20.0% |
| !! | TAATTAAAATTAAGCACAAG+AGG | - | chr6.1:55699976-55699995 | None:intergenic | 20.0% |
| !! | TACAAAATTGCTAAAACTTA+TGG | - | chr6.1:55699923-55699942 | None:intergenic | 20.0% |
| !! | TAGAGATTAATGAGTTATAT+AGG | + | chr6.1:55699403-55699422 | MS.gene81187:intron | 20.0% |
| !! | TGATACATAATAAGACATTA+TGG | + | chr6.1:55701031-55701050 | MS.gene81187:intron | 20.0% |
| !! | TTATTCTAAATAGTGTATCA+CGG | + | chr6.1:55699668-55699687 | MS.gene81187:intron | 20.0% |
| !!! | AACTAAAGGTTAAAGTATTA+AGG | + | chr6.1:55699377-55699396 | MS.gene81187:intron | 20.0% |
| !!! | TAAACTATTGATTCCTATTT+GGG | + | chr6.1:55701414-55701433 | MS.gene81187:intron | 20.0% |
| !!! | TAACTAAACTGCTTATTTTA+AGG | + | chr6.1:55699736-55699755 | MS.gene81187:intron | 20.0% |
| !!! | TGAATTTTGTTGATTTAGTT+AGG | + | chr6.1:55701155-55701174 | MS.gene81187:intron | 20.0% |
| !!! | TTAAACTATTGATTCCTATT+TGG | + | chr6.1:55701413-55701432 | MS.gene81187:intron | 20.0% |
| !!! | TTAATTTTGTTACAACTGAA+GGG | + | chr6.1:55700652-55700671 | MS.gene81187:intron | 20.0% |
| !!! | TTTAACCTTTAGTTTTTTCT+AGG | - | chr6.1:55699371-55699390 | None:intergenic | 20.0% |
| ! | ACAATTCTCTTATCAATGTA+TGG | + | chr6.1:55700531-55700550 | MS.gene81187:intron | 25.0% |
| ! | AGATCAAATAAAACCCAAAT+AGG | - | chr6.1:55701430-55701449 | None:intergenic | 25.0% |
| ! | ATCAACAACACTTAAATAAG+TGG | - | chr6.1:55699563-55699582 | None:intergenic | 25.0% |
| ! | ATTTATAATTCTATCACGTC+TGG | - | chr6.1:55699189-55699208 | None:intergenic | 25.0% |
| ! | CAATATTAGAAAAAGAGTTG+GGG | + | chr6.1:55699211-55699230 | MS.gene81187:intron | 25.0% |
| ! | CATTTCTCTTAAAAGAAGTT+AGG | + | chr6.1:55701463-55701482 | MS.gene81187:intron | 25.0% |
| ! | GACAATATTAGAAAAAGAGT+TGG | + | chr6.1:55699209-55699228 | MS.gene81187:intron | 25.0% |
| ! | GGAAATATGGATATTATTAG+AGG | - | chr6.1:55700188-55700207 | None:intergenic | 25.0% |
| ! | TGAATATAAACACCTTTATC+TGG | + | chr6.1:55700570-55700589 | MS.gene81187:intron | 25.0% |
| ! | TGATATATCATTGAACACTA+TGG | + | chr6.1:55699430-55699449 | MS.gene81187:intron | 25.0% |
| ! | TTAACAGACAAACAAAACAA+CGG | - | chr6.1:55701186-55701205 | None:intergenic | 25.0% |
| ! | TTATAGGATTTCTAACATTC+TGG | + | chr6.1:55700153-55700172 | MS.gene81187:intron | 25.0% |
| ! | TTGTCAAATAGCTACTATTA+TGG | + | chr6.1:55700954-55700973 | MS.gene81187:intron | 25.0% |
| ! | TTTGTTTGTCTGTTAAACTT+TGG | + | chr6.1:55701190-55701209 | MS.gene81187:intron | 25.0% |
| !! | GTTAATTTTGTTACAACTGA+AGG | + | chr6.1:55700651-55700670 | MS.gene81187:intron | 25.0% |
| !! | TAATTTTGTTACAACTGAAG+GGG | + | chr6.1:55700653-55700672 | MS.gene81187:intron | 25.0% |
| !! | TATTTAAGTGTTGTTGATCT+TGG | + | chr6.1:55699565-55699584 | MS.gene81187:intron | 25.0% |
| !!! | TGAAAATCTGCTCATTTTTT+TGG | - | chr6.1:55702083-55702102 | None:intergenic | 25.0% |
| !!! | TGTGTTGATATTTAGCTTTT+AGG | + | chr6.1:55699778-55699797 | MS.gene81187:intron | 25.0% |
| AAATCCCTCTAGTTATTGAT+AGG | + | chr6.1:55702443-55702462 | MS.gene81187:CDS | 30.0% | |
| AACTAGCATTTGCTCAAATA+TGG | - | chr6.1:55700392-55700411 | None:intergenic | 30.0% | |
| AATAAGGAGAGTAGATAAGA+TGG | + | chr6.1:55699313-55699332 | MS.gene81187:intron | 30.0% | |
| AATCCATGAAATGACTGATA+AGG | - | chr6.1:55698867-55698886 | None:intergenic | 30.0% | |
| ACAACTATGTATGGGAAATA+TGG | - | chr6.1:55700201-55700220 | None:intergenic | 30.0% | |
| ACAAGTCATTCTTGAAAAGA+TGG | + | chr6.1:55700729-55700748 | MS.gene81187:intron | 30.0% | |
| ACACAAAACAAGTTAGGATT+AGG | + | chr6.1:55700679-55700698 | MS.gene81187:intron | 30.0% | |
| ACTAGCATTTGCTCAAATAT+GGG | - | chr6.1:55700391-55700410 | None:intergenic | 30.0% | |
| AGAAAGGAGAACTTGAATTA+TGG | + | chr6.1:55702314-55702333 | MS.gene81187:CDS | 30.0% | |
| ATATAACCTTGTTAGCTGAA+TGG | + | chr6.1:55700415-55700434 | MS.gene81187:intron | 30.0% | |
| ATATTCTGAATCGAGAACTT+CGG | - | chr6.1:55701951-55701970 | None:intergenic | 30.0% | |
| CTCTAGTTATTGATAGGATT+CGG | + | chr6.1:55702449-55702468 | MS.gene81187:CDS | 30.0% | |
| GAAAGGAGAACTTGAATTAT+GGG | + | chr6.1:55702315-55702334 | MS.gene81187:CDS | 30.0% | |
| GAAGACCTAGAAAAAACTAA+AGG | + | chr6.1:55699363-55699382 | MS.gene81187:intron | 30.0% | |
| GAATCCTATCAATAACTAGA+GGG | - | chr6.1:55702450-55702469 | None:intergenic | 30.0% | |
| GATAAATATAACTCCTGGAT+CGG | + | chr6.1:55702360-55702379 | MS.gene81187:CDS | 30.0% | |
| GCTAAGATAAATATAACTCC+TGG | + | chr6.1:55702355-55702374 | MS.gene81187:CDS | 30.0% | |
| GTTATACAAAAATGTTGCTC+AGG | + | chr6.1:55698965-55698984 | MS.gene81187:intron | 30.0% | |
| GTTCTATATTTAACGTAACG+AGG | - | chr6.1:55700480-55700499 | None:intergenic | 30.0% | |
| TAAAAACCATTCAGCTAACA+AGG | - | chr6.1:55700424-55700443 | None:intergenic | 30.0% | |
| TAAAACCGGTAATGTTGTAT+GGG | + | chr6.1:55699016-55699035 | MS.gene81187:intron | 30.0% | |
| TACCTGTAGATTCTGTAATA+AGG | + | chr6.1:55699297-55699316 | MS.gene81187:intron | 30.0% | |
| TATATCATTGAACACTATGG+CGG | + | chr6.1:55699433-55699452 | MS.gene81187:intron | 30.0% | |
| TGTCTAATGATCACAGAAAA+TGG | - | chr6.1:55701011-55701030 | None:intergenic | 30.0% | |
| TTATCAATGTATGGTGTAAC+TGG | + | chr6.1:55700540-55700559 | MS.gene81187:intron | 30.0% | |
| TTCCTGAATGAATCGTTTAT+CGG | - | chr6.1:55702149-55702168 | None:intergenic | 30.0% | |
| TTGACTAAATGCTTGTTCAA+GGG | - | chr6.1:55701741-55701760 | None:intergenic | 30.0% | |
| TTGGAGAATTGAAGATTGAA+GGG | + | chr6.1:55700037-55700056 | MS.gene81187:intron | 30.0% | |
| TTTATCATCAGCTGTAAAAC+CGG | + | chr6.1:55699002-55699021 | MS.gene81187:intron | 30.0% | |
| TTTGGAGAATTGAAGATTGA+AGG | + | chr6.1:55700036-55700055 | MS.gene81187:intron | 30.0% | |
| ! | AATTTTGTTACAACTGAAGG+GGG | + | chr6.1:55700654-55700673 | MS.gene81187:intron | 30.0% |
| ! | AGATTTTATGCATCAGGTTA+TGG | + | chr6.1:55701242-55701261 | MS.gene81187:CDS | 30.0% |
| ! | ATCTAACCTATAGTTTTCCA+TGG | - | chr6.1:55700861-55700880 | None:intergenic | 30.0% |
| ! | GATTTTATGCATCAGGTTAT+GGG | + | chr6.1:55701243-55701262 | MS.gene81187:CDS | 30.0% |
| ! | TGCATTGTATTTTGCTTAGA+GGG | + | chr6.1:55699512-55699531 | MS.gene81187:intron | 30.0% |
| ! | TTCACACAACAAAACTGTTT+TGG | + | chr6.1:55702051-55702070 | MS.gene81187:CDS | 30.0% |
| ! | TTTTACAACTATATCGTTCG+AGG | + | chr6.1:55702420-55702439 | MS.gene81187:CDS | 30.0% |
| AAACAAATACGAAACCATCC+TGG | - | chr6.1:55702403-55702422 | None:intergenic | 35.0% | |
| AACGATAGTATCTCAATTGC+AGG | - | chr6.1:55701321-55701340 | None:intergenic | 35.0% | |
| AAGGTTAAACCACTAATGTG+TGG | - | chr6.1:55699623-55699642 | None:intergenic | 35.0% | |
| AATAGCGACTATAGCACTAT+AGG | - | chr6.1:55700269-55700288 | None:intergenic | 35.0% | |
| AGCACCTATAGTACAAAAGA+CGG | + | chr6.1:55699235-55699254 | MS.gene81187:intron | 35.0% | |
| AGTCAAATCACTATAGGCAA+AGG | + | chr6.1:55699341-55699360 | MS.gene81187:intron | 35.0% | |
| ATATTGCCAACAGGATTTGA+AGG | - | chr6.1:55701809-55701828 | None:intergenic | 35.0% | |
| ATGTTAGTACCATATTCGAC+GGG | - | chr6.1:55701287-55701306 | None:intergenic | 35.0% | |
| CAACCGAAATAGAATAAGAC+GGG | + | chr6.1:55702180-55702199 | MS.gene81187:CDS | 35.0% | |
| CACAATGAGAATAGGTGTTA+TGG | + | chr6.1:55699870-55699889 | MS.gene81187:intron | 35.0% | |
| CACTATTAAGGTAGACTAGA+TGG | + | chr6.1:55700803-55700822 | MS.gene81187:intron | 35.0% | |
| CAGGATTCACAACTATGTAT+GGG | - | chr6.1:55700209-55700228 | None:intergenic | 35.0% | |
| CCAACCGAAATAGAATAAGA+CGG | + | chr6.1:55702179-55702198 | MS.gene81187:CDS | 35.0% | |
| CGAATCCTATCAATAACTAG+AGG | - | chr6.1:55702451-55702470 | None:intergenic | 35.0% | |
| CGATAGTAAAATAAGCGTAG+AGG | + | chr6.1:55699068-55699087 | MS.gene81187:intron | 35.0% | |
| CTAATGATCACAGAAAATGG+CGG | - | chr6.1:55701008-55701027 | None:intergenic | 35.0% | |
| CTCCTTATTACAGAATCTAC+AGG | - | chr6.1:55699302-55699321 | None:intergenic | 35.0% | |
| CTTGACTAAATGCTTGTTCA+AGG | - | chr6.1:55701742-55701761 | None:intergenic | 35.0% | |
| GATGTTAGTACCATATTCGA+CGG | - | chr6.1:55701288-55701307 | None:intergenic | 35.0% | |
| GGTTCAATAGTTAGAGAAAG+AGG | + | chr6.1:55700831-55700850 | MS.gene81187:intron | 35.0% | |
| GTAAAACCGGTAATGTTGTA+TGG | + | chr6.1:55699015-55699034 | MS.gene81187:intron | 35.0% | |
| GTCGAATATGGTACTAACAT+CGG | + | chr6.1:55701287-55701306 | MS.gene81187:CDS | 35.0% | |
| TATTGCCAACAGGATTTGAA+GGG | - | chr6.1:55701808-55701827 | None:intergenic | 35.0% | |
| TCGAATATGGTACTAACATC+GGG | + | chr6.1:55701288-55701307 | MS.gene81187:CDS | 35.0% | |
| TTATTATCCAGGGTAATCGA+CGG | + | chr6.1:55701383-55701402 | MS.gene81187:intron | 35.0% | |
| TTCCGATAAACGATTCATTC+AGG | + | chr6.1:55702144-55702163 | MS.gene81187:CDS | 35.0% | |
| TTGTACTAAATAGTGTACCG+CGG | + | chr6.1:55700299-55700318 | MS.gene81187:intron | 35.0% | |
| TTTAGTCAAGCAAGAAAACG+AGG | + | chr6.1:55701752-55701771 | MS.gene81187:CDS | 35.0% | |
| TTTGTCCCATACAACATTAC+CGG | - | chr6.1:55699024-55699043 | None:intergenic | 35.0% | |
| ! | AAAACCTTTTCGCACTAGAT+AGG | - | chr6.1:55701068-55701087 | None:intergenic | 35.0% |
| ! | AAACCTTTTCGCACTAGATA+GGG | - | chr6.1:55701067-55701086 | None:intergenic | 35.0% |
| ! | CTGCATTGTATTTTGCTTAG+AGG | + | chr6.1:55699511-55699530 | MS.gene81187:intron | 35.0% |
| ! | GTGGATTGTTTAACCAAACT+AGG | + | chr6.1:55702217-55702236 | MS.gene81187:CDS | 35.0% |
| ! | TAGTGCGAAAAGGTTTTTGA+CGG | + | chr6.1:55701071-55701090 | MS.gene81187:intron | 35.0% |
| ! | TCTACCGTCTTTTGTACTAT+AGG | - | chr6.1:55699242-55699261 | None:intergenic | 35.0% |
| !! | AGAAGACTGAAAAGCATTTC+TGG | - | chr6.1:55701839-55701858 | None:intergenic | 35.0% |
| !!! | CACTTATTTTACTCTCGTGT+TGG | - | chr6.1:55699134-55699153 | None:intergenic | 35.0% |
| !!! | GTTGTTTGCTATGATTTTGC+AGG | + | chr6.1:55701212-55701231 | MS.gene81187:intron | 35.0% |
| AAAAATGTTGCTCAGGCTGA+AGG | + | chr6.1:55698972-55698991 | MS.gene81187:intron | 40.0% | |
| AAAATGTTGCTCAGGCTGAA+GGG | + | chr6.1:55698973-55698992 | MS.gene81187:intron | 40.0% | |
| AACAAATCATCATTGCTCCG+CGG | - | chr6.1:55700319-55700338 | None:intergenic | 40.0% | |
| AAGGTAGACTAGATGGAGAA+TGG | + | chr6.1:55700810-55700829 | MS.gene81187:intron | 40.0% | |
| ACAGGTATTAAGTCTATCCC+TGG | - | chr6.1:55701677-55701696 | None:intergenic | 40.0% | |
| ACCCTGGATAATAAGGTGTA+GGG | - | chr6.1:55701377-55701396 | None:intergenic | 40.0% | |
| AGAATTTGACCCGTCGAATA+TGG | + | chr6.1:55701275-55701294 | MS.gene81187:CDS | 40.0% | |
| AGACGGTAGAAACTTTGCTT+AGG | + | chr6.1:55699252-55699271 | MS.gene81187:intron | 40.0% | |
| AGCACACTTGATTCCTAGTT+TGG | - | chr6.1:55702233-55702252 | None:intergenic | 40.0% | |
| AGCCGCGTTCATATAGTATA+CGG | + | chr6.1:55701980-55701999 | MS.gene81187:CDS | 40.0% | |
| AGTTCTCCTTTCTCGCTATA+AGG | - | chr6.1:55702307-55702326 | None:intergenic | 40.0% | |
| ATCAGACCTTATAGCGAGAA+AGG | + | chr6.1:55702298-55702317 | MS.gene81187:CDS | 40.0% | |
| CAAATTGCACCACACATTAG+TGG | + | chr6.1:55699611-55699630 | MS.gene81187:intron | 40.0% | |
| CACTATAGGCTATAGCATAG+TGG | - | chr6.1:55700255-55700274 | None:intergenic | 40.0% | |
| CCAGGATTCACAACTATGTA+TGG | - | chr6.1:55700210-55700229 | None:intergenic | 40.0% | |
| CCATACATAGTTGTGAATCC+TGG | + | chr6.1:55700207-55700226 | MS.gene81187:intron | 40.0% | |
| CTTATCTCACTAAGTGAGGT+CGG | - | chr6.1:55699475-55699494 | None:intergenic | 40.0% | |
| GAAACTTTGCTTAGGTGGTT+TGG | + | chr6.1:55699260-55699279 | MS.gene81187:intron | 40.0% | |
| GAAGTAACTAACCTCTGTGT+TGG | - | chr6.1:55702118-55702137 | None:intergenic | 40.0% | |
| GAATCCTGGAAATTAGCGAT+TGG | + | chr6.1:55700221-55700240 | MS.gene81187:intron | 40.0% | |
| GAGAGCAGTCAAATCACTAT+AGG | + | chr6.1:55699335-55699354 | MS.gene81187:intron | 40.0% | |
| GATAATAAGGTGTAGGGACA+AGG | - | chr6.1:55701371-55701390 | None:intergenic | 40.0% | |
| GGAAGACCATGGAAAACTAT+AGG | + | chr6.1:55700852-55700871 | MS.gene81187:intron | 40.0% | |
| GTCGATTACCCTGGATAATA+AGG | - | chr6.1:55701384-55701403 | None:intergenic | 40.0% | |
| GTGTGTAGCACAATGAGAAT+AGG | + | chr6.1:55699862-55699881 | MS.gene81187:intron | 40.0% | |
| GTTGTCTTCGTACAGAAAAG+AGG | + | chr6.1:55700629-55700648 | MS.gene81187:intron | 40.0% | |
| TACCCTGGATAATAAGGTGT+AGG | - | chr6.1:55701378-55701397 | None:intergenic | 40.0% | |
| TAGACCACATCACTTGATCA+TGG | + | chr6.1:55700082-55700101 | MS.gene81187:intron | 40.0% | |
| TAGAGATGAGAATGTTGCGT+TGG | + | chr6.1:55699154-55699173 | MS.gene81187:intron | 40.0% | |
| TCAACCAATCGCTAATTTCC+AGG | - | chr6.1:55700228-55700247 | None:intergenic | 40.0% | |
| TCACTTAGTGAGATAAGGCT+TGG | + | chr6.1:55699478-55699497 | MS.gene81187:intron | 40.0% | |
| TCCCTACACCTTATTATCCA+GGG | + | chr6.1:55701373-55701392 | MS.gene81187:CDS | 40.0% | |
| TGAGATACTATCGTTCTGCT+TGG | + | chr6.1:55701326-55701345 | MS.gene81187:CDS | 40.0% | |
| TGTTGTATGGGACAAAGTGT+TGG | + | chr6.1:55699028-55699047 | MS.gene81187:intron | 40.0% | |
| TTAGAGAAAGAGGAAGACCA+TGG | + | chr6.1:55700841-55700860 | MS.gene81187:intron | 40.0% | |
| TTCTCCATGATCAAGTGATG+TGG | - | chr6.1:55700089-55700108 | None:intergenic | 40.0% | |
| TTTATGCATCAGGTTATGGG+AGG | + | chr6.1:55701246-55701265 | MS.gene81187:CDS | 40.0% | |
| ! | AAGCCTTATCTCACTAAGTG+AGG | - | chr6.1:55699479-55699498 | None:intergenic | 40.0% |
| ! | AGTGATTATGCAGCTTTGAC+AGG | + | chr6.1:55701636-55701655 | MS.gene81187:intron | 40.0% |
| ! | ATTGCTGACGAAGTATTTGC+AGG | + | chr6.1:55701890-55701909 | MS.gene81187:CDS | 40.0% |
| ! | CAATCGAGAGGTCTTTTGAT+AGG | - | chr6.1:55702006-55702025 | None:intergenic | 40.0% |
| ! | CCGTCTTATTCTATTTCGGT+TGG | - | chr6.1:55702182-55702201 | None:intergenic | 40.0% |
| ! | GCACCCGTCTTATTCTATTT+CGG | - | chr6.1:55702186-55702205 | None:intergenic | 40.0% |
| ! | GTGATTATGCAGCTTTGACA+GGG | + | chr6.1:55701637-55701656 | MS.gene81187:intron | 40.0% |
| ! | GTTGGCAGATTTTATGCATC+AGG | + | chr6.1:55701236-55701255 | MS.gene81187:CDS | 40.0% |
| ! | TCGATTGCTGGATTTAGAGT+CGG | + | chr6.1:55702019-55702038 | MS.gene81187:CDS | 40.0% |
| !! | GACTCGTAGAAGCACTATTA+AGG | + | chr6.1:55700791-55700810 | MS.gene81187:intron | 40.0% |
| !! | GGTTTGTTGCATCCAGATAA+AGG | - | chr6.1:55700585-55700604 | None:intergenic | 40.0% |
| AAACCACCCAAGACAAGACT+CGG | - | chr6.1:55700755-55700774 | None:intergenic | 45.0% | |
| AAACGAGGAGTCAAAGTTCG+CGG | + | chr6.1:55701767-55701786 | MS.gene81187:CDS | 45.0% | |
| ATCAGCCCAACAGAACATAC+CGG | - | chr6.1:55702266-55702285 | None:intergenic | 45.0% | |
| CGACCTCACTTAGTGAGATA+AGG | + | chr6.1:55699473-55699492 | MS.gene81187:intron | 45.0% | |
| CGGTAGAAACTTTGCTTAGG+TGG | + | chr6.1:55699255-55699274 | MS.gene81187:intron | 45.0% | |
| CTATATCTGCACCAACACAG+AGG | + | chr6.1:55702104-55702123 | MS.gene81187:CDS | 45.0% | |
| CTCTAAATCCAGCAATCGAG+AGG | - | chr6.1:55702018-55702037 | None:intergenic | 45.0% | |
| GAGGAGATGAGATGTTGCAT+TGG | + | chr6.1:55699087-55699106 | MS.gene81187:intron | 45.0% | |
| GATGAGAATGTTGCGTTGGA+TGG | + | chr6.1:55699158-55699177 | MS.gene81187:intron | 45.0% | |
| GCGCCTTATCAGTCATTTCA+TGG | + | chr6.1:55698861-55698880 | MS.gene81187:CDS | 45.0% | |
| GCTATAGCGCATCGAACATT+AGG | - | chr6.1:55700911-55700930 | None:intergenic | 45.0% | |
| GGACAAGGAATGCATTTCCA+TGG | - | chr6.1:55701356-55701375 | None:intergenic | 45.0% | |
| GGAGCAGTGTTGTCAAATAG+TGG | - | chr6.1:55700370-55700389 | None:intergenic | 45.0% | |
| GGCCGTATACTATATGAACG+CGG | - | chr6.1:55701985-55702004 | None:intergenic | 45.0% | |
| GGGGTCACACAAAACAAGTT+AGG | + | chr6.1:55700673-55700692 | MS.gene81187:intron | 45.0% | |
| GGTGTCTGAATATTGCCAAC+AGG | - | chr6.1:55701818-55701837 | None:intergenic | 45.0% | |
| GTCAAATAGCGGTTAGAGCA+AGG | - | chr6.1:55699642-55699661 | None:intergenic | 45.0% | |
| GTCCCTACACCTTATTATCC+AGG | + | chr6.1:55701372-55701391 | MS.gene81187:CDS | 45.0% | |
| TAGAGGGAATGCATGTGTTG+TGG | + | chr6.1:55699528-55699547 | MS.gene81187:intron | 45.0% | |
| TCAAAAGACCTCTCGATTGC+TGG | + | chr6.1:55702007-55702026 | MS.gene81187:CDS | 45.0% | |
| TCAGTACTTCGACAGTGAAC+AGG | - | chr6.1:55701695-55701714 | None:intergenic | 45.0% | |
| TCGAACCCTTCAAATCCTGT+TGG | + | chr6.1:55701800-55701819 | MS.gene81187:CDS | 45.0% | |
| TGACCCTATCTAGTGCGAAA+AGG | + | chr6.1:55701061-55701080 | MS.gene81187:intron | 45.0% | |
| ! | GATGTTGCATTGGAGAGTGT+TGG | + | chr6.1:55699097-55699116 | MS.gene81187:intron | 45.0% |
| ! | GTGTTGTTGATCTTGGATCG+CGG | + | chr6.1:55699572-55699591 | MS.gene81187:intron | 45.0% |
| ! | TGCGAAAAGGTTTTTGACGG+TGG | + | chr6.1:55701074-55701093 | MS.gene81187:intron | 45.0% |
| ! | TGCTATGATTTTGCAGGCGT+TGG | + | chr6.1:55701218-55701237 | MS.gene81187:intron | 45.0% |
| !! | ACCATCCTGGTTCTATGCAA+TGG | - | chr6.1:55702390-55702409 | None:intergenic | 45.0% |
| !! | GTATGGGACAAAGTGTTGGT+CGG | + | chr6.1:55699032-55699051 | MS.gene81187:intron | 45.0% |
| !! | TATGGGACAAAGTGTTGGTC+GGG | + | chr6.1:55699033-55699052 | MS.gene81187:intron | 45.0% |
| !! | TTGCATTGGAGAGTGTTGGT+CGG | + | chr6.1:55699101-55699120 | MS.gene81187:intron | 45.0% |
| !!! | TTGGGTGGTTTTGACATCTG+TGG | + | chr6.1:55700764-55700783 | MS.gene81187:intron | 45.0% |
| !! | TAAAAATATCTTAATTAAAA+AGG | + | chr6.1:55701500-55701519 | MS.gene81187:intron | 5.0% |
| !!! | CTTAATTTTAATTATTATTA+CGG | + | chr6.1:55699982-55700001 | MS.gene81187:intron | 5.0% |
| GCCATTGCATAGAACCAGGA+TGG | + | chr6.1:55702386-55702405 | MS.gene81187:CDS | 50.0% | |
| GCTTGCCATTGCATAGAACC+AGG | + | chr6.1:55702382-55702401 | MS.gene81187:CDS | 50.0% | |
| GCTTTGACAGGGACGTAAGA+TGG | + | chr6.1:55701648-55701667 | MS.gene81187:intron | 50.0% | |
| GTATTTGCAGGCTCCACGTA+CGG | + | chr6.1:55701902-55701921 | MS.gene81187:CDS | 50.0% | |
| ! | AAGATGGCCGAGTCTTGTCT+TGG | + | chr6.1:55700745-55700764 | MS.gene81187:intron | 50.0% |
| ! | AGATGGCCGAGTCTTGTCTT+GGG | + | chr6.1:55700746-55700765 | MS.gene81187:intron | 50.0% |
| AAACTCCTCGCTTCCGTACG+TGG | - | chr6.1:55701918-55701937 | None:intergenic | 55.0% | |
| AAGTGTGCTAAGAGCAGCGC+CGG | + | chr6.1:55702244-55702263 | MS.gene81187:CDS | 55.0% | |
| ACGGGTGCACGATGAGTTTG+TGG | + | chr6.1:55702198-55702217 | MS.gene81187:CDS | 55.0% | |
| ACTAAGTGAGGTCGGCTACG+TGG | - | chr6.1:55699467-55699486 | None:intergenic | 55.0% | |
| ATGCAATGGCAAGCCGATCC+AGG | - | chr6.1:55702376-55702395 | None:intergenic | 55.0% | |
| TCGTTCTGCTTGGCAGACCA+TGG | + | chr6.1:55701336-55701355 | MS.gene81187:CDS | 55.0% | |
| !! | CAGCGCCGGTATGTTCTGTT+GGG | + | chr6.1:55702258-55702277 | MS.gene81187:CDS | 55.0% |
| !! | GAAAGTGCCGTCGATTACCC+TGG | - | chr6.1:55701393-55701412 | None:intergenic | 55.0% |
| AGGGACGTAAGATGGCGTCC+AGG | + | chr6.1:55701656-55701675 | MS.gene81187:CDS | 60.0% | |
| GGGACGTAAGATGGCGTCCA+GGG | + | chr6.1:55701657-55701676 | MS.gene81187:CDS | 60.0% | |
| ! | TGGCCGAGTCTTGTCTTGGG+TGG | + | chr6.1:55700749-55700768 | MS.gene81187:intron | 60.0% |
| !! | GCAGCGCCGGTATGTTCTGT+TGG | + | chr6.1:55702257-55702276 | MS.gene81187:CDS | 60.0% |
| AGGCTCCACGTACGGAAGCG+AGG | + | chr6.1:55701910-55701929 | MS.gene81187:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 55698822 | 55702504 | 55698822 | ID=MS.gene81187 |
| chr6.1 | mRNA | 55698822 | 55702504 | 55698822 | ID=MS.gene81187.t1;Parent=MS.gene81187 |
| chr6.1 | exon | 55698822 | 55698902 | 55698822 | ID=MS.gene81187.t1.exon1;Parent=MS.gene81187.t1 |
| chr6.1 | CDS | 55698822 | 55698902 | 55698822 | ID=cds.MS.gene81187.t1;Parent=MS.gene81187.t1 |
| chr6.1 | exon | 55701234 | 55701394 | 55701234 | ID=MS.gene81187.t1.exon2;Parent=MS.gene81187.t1 |
| chr6.1 | CDS | 55701234 | 55701394 | 55701234 | ID=cds.MS.gene81187.t1;Parent=MS.gene81187.t1 |
| chr6.1 | exon | 55701649 | 55702504 | 55701649 | ID=MS.gene81187.t1.exon3;Parent=MS.gene81187.t1 |
| chr6.1 | CDS | 55701649 | 55702504 | 55701649 | ID=cds.MS.gene81187.t1;Parent=MS.gene81187.t1 |
| Gene Sequence |
| Protein sequence |
